BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0260.2
(694 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q9SIM3 Putative retroelement pol polyprotein [Arabidop... 645 0.0
UniRef100_O81617 F8M12.17 protein [Arabidopsis thaliana] 632 e-180
UniRef100_Q9FX79 Putative retroelement polyprotein [Arabidopsis ... 631 e-179
UniRef100_Q9FJV3 Retroelement pol polyprotein-like [Arabidopsis ... 631 e-179
UniRef100_Q9XII7 Putative retroelement pol polyprotein [Arabidop... 627 e-178
UniRef100_Q9SN55 Putative retrotransposon polyprotein [Arabidops... 627 e-178
UniRef100_O04543 F20P5.25 protein [Arabidopsis thaliana] 607 e-172
UniRef100_O23588 Retrotransposon like protein [Arabidopsis thali... 604 e-171
UniRef100_Q9ZPU4 Putative retroelement pol polyprotein [Arabidop... 590 e-167
UniRef100_O23302 Retrovirus-related like polyprotein [Arabidopsi... 583 e-165
UniRef100_Q9LVQ2 Retroelement pol polyprotein-like [Arabidopsis ... 573 e-162
UniRef100_Q5XWR5 Putative retroelement pol polyprotein-like [Sol... 569 e-160
UniRef100_Q9SLF0 Putative retroelement pol polyprotein [Arabidop... 556 e-157
UniRef100_O22175 Putative retroelement pol polyprotein [Arabidop... 555 e-156
UniRef100_Q8L700 Hypothetical protein [Arabidopsis thaliana] 554 e-156
UniRef100_O65468 Hypothetical protein F21P8.50 [Arabidopsis thal... 546 e-154
UniRef100_Q9FLR2 Polyprotein-like [Arabidopsis thaliana] 536 e-151
UniRef100_Q8S805 Putative copia-type polyprotein [Oryza sativa] 533 e-150
UniRef100_Q5XWR3 Putative polyprotein [Solanum tuberosum] 524 e-147
UniRef100_Q7X6S0 OSJNBb0011N17.2 protein [Oryza sativa] 523 e-147
>UniRef100_Q9SIM3 Putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1461
Score = 645 bits (1663), Expect = 0.0
Identities = 334/697 (47%), Positives = 456/697 (64%), Gaps = 33/697 (4%)
Query: 4 FSFLKTFGSLCYASTLNRNRTKLDPRAQKCVFIGYRHGTKGFLLFDIKSREVLLSRHVLF 63
+S LKTFG LCY+ST ++ R K PR++ CVF+GY G KG+ L D++S V +SR+V F
Sbjct: 786 YSQLKTFGCLCYSSTSSKQRHKFLPRSRACVFLGYPFGFKGYKLLDLESNVVHISRNVEF 845
Query: 64 HETEFPFKTMEHTLDPCASVSLPSFMGSEALDYTPLPQGQTPDPQPQVPEVLPVPQTATR 123
HE FP + + + + V P PL G + P++ P Q + R
Sbjct: 846 HEELFPLASSQQSATTASDVFTPM---------DPLSSGNSITSHLPSPQISPSTQISKR 896
Query: 124 HSTRSRRVPSHFHDYQLALPSSIAALNSSSKVSSTGIKHPLSSVLSYTNLSPKHYAFTTN 183
T+ P+H DY +N HP+SS LSY+ +SP H + N
Sbjct: 897 RITK---FPAHLQDYHCYF------VNKDDS-------HPISSSLSYSQISPSHMLYINN 940
Query: 184 VSSTVEPTTYTQAAQCKEWRDAMDKELEALSRNNTWLIVDLPPTKKPIGCKWVYRVKHKQ 243
+S P +Y +A KEW A+D+E+ A+ R +TW I LPP KK +GCKWV+ VK
Sbjct: 941 ISKIPIPQSYHEAKDSKEWCGAIDQEIGAMERTDTWEITSLPPGKKAVGCKWVFTVKFHA 1000
Query: 244 DGSIDRYKARLVAKGYTQVEGLDYLDTFSPVAKTTTLRLLLALAASQGWFLHQLDVDNAF 303
DGS++R+KAR+VAKGYTQ EGLDY +TFSPVAK T++LLL ++AS+ W+L+QLD+ NAF
Sbjct: 1001 DGSLERFKARIVAKGYTQKEGLDYTETFSPVAKMATVKLLLKVSASKKWYLNQLDISNAF 1060
Query: 304 LHGTLDEEIYMRLPPGVSSPR-----PNQVCLLQKSLYGLKQASRQWYNTLVAALKSLGY 358
L+G L+E IYM+LP G + + PN VC L+KS+YGLKQASRQW+ +L +LG+
Sbjct: 1061 LNGDLEETIYMKLPDGYADIKGTSLPPNVVCRLKKSIYGLKQASRQWFLKFSNSLLALGF 1120
Query: 359 EQCPHDHTLLLKRTSTSITALLLYVDDVLLTGNSFEEIQAVKSFLHSQFRIKDLGDLKFF 418
E+ DHTL ++ + LL+YVDD+++ + + Q++ L + F++++LG LK+F
Sbjct: 1121 EKQHGDHTLFVRCIGSEFIVLLVYVDDIVIASTTEQAAQSLTEALKASFKLRELGPLKYF 1180
Query: 419 LGLEVARSAKGICLTQRKYALELLTDAGLLGCKPVRTPMDSTLHLSQTGGTLLDDPTSYR 478
LGLEVAR+++GI L+QRKYALELLT A +L CKP PM + LS+ G LL+D YR
Sbjct: 1181 LGLEVARTSEGISLSQRKYALELLTSADMLDCKPSSIPMTPNIRLSKNDGLLLEDKEMYR 1240
Query: 479 RLVGRLLYLTTTRPDLNYVVQQLSQYLASPTDLHQQAATRVLRYVKGAPGQGLFFSATAS 538
RLVG+L+YLT TRPD+ + V +L Q+ ++P H A +VL+Y+KG GQGLF+SA
Sbjct: 1241 RLVGKLMYLTITRPDITFAVNKLCQFSSAPRTAHLAAVYKVLQYIKGTVGQGLFYSAEDD 1300
Query: 539 LKLQAYSDSDWAGCPDTRRSINGYSIFLGSSLISWRTKKQTTVSRSSSEAEYRALAAIVC 598
L L+ Y+D+DW CPD+RRS G+++F+GSSLISWR+KKQ TVSRSS+EAEYRALA C
Sbjct: 1301 LTLKGYTDADWGTCPDSRRSTTGFTMFVGSSLISWRSKKQPTVSRSSAEAEYRALALASC 1360
Query: 599 EVQWLSYLFQFLHLRVPFPVP-LFCDNQSAIHIAQNPTFHERTKHIELDCHVVRTKLQAG 657
E+ WLS L L LRV VP L+ D+ +A++IA NP FHERTKHIE+DCH VR KL G
Sbjct: 1361 EMAWLSTL--LLALRVHSGVPILYSDSTAAVYIATNPVFHERTKHIEIDCHTVREKLDNG 1418
Query: 658 LIHLLPVSTRDQLADIFTKPLPPSLFPTFVLKLGLYN 694
+ LL V T+DQ+ADI TKPL P F + K+ + N
Sbjct: 1419 QLKLLHVKTKDQVADILTKPLFPYQFAHLLSKMSIQN 1455
>UniRef100_O81617 F8M12.17 protein [Arabidopsis thaliana]
Length = 1633
Score = 632 bits (1631), Expect = e-180
Identities = 327/724 (45%), Positives = 457/724 (62%), Gaps = 65/724 (8%)
Query: 13 LCYASTLNRNRTKLDPRAQKCVFIGYRHGTKGFLLFDIKSREVLLSRHVLFHETEFPFKT 72
LCYAST +R K PRA+ CVF+GY G KG+ + D++S + ++R+V+FHET+FPFKT
Sbjct: 724 LCYASTNVHDRNKFSPRARPCVFLGYPSGYKGYKVLDLESHSISITRNVVFHETKFPFKT 783
Query: 73 ---MEHTLDPCASVSLPSFMGSEALDYTPLPQ--------GQTPDPQPQVPEVLPVPQTA 121
++ ++D + LP ++ PL T + + P+P T
Sbjct: 784 SKFLKESVDMFPNSILPLPAPLHFVESMPLDDDLRADDNNASTSNSASSASSIPPLPSTV 843
Query: 122 TRHST----------------RSRRVPSHFHDYQLALPSSIAALNSSSKVSSTGIK---- 161
+T R+ + P++ +Y +S+ L+S S +ST I+
Sbjct: 844 NTQNTDALDIDTNSVPIARPKRNAKAPAYLSEYHC---NSVPFLSSLSPTTSTSIETPSS 900
Query: 162 ----------HPLSSVLSYTNLSPKHYAFTTNVSSTVEPTTYTQAAQCKEWRDAMDKELE 211
+P+S+ +SY L+P +++ + EP +TQA + ++W A ++EL
Sbjct: 901 SIPPKKITTPYPMSTAISYDKLTPLFHSYICAYNVETEPKAFTQAMKSEKWTRAANEELH 960
Query: 212 ALSRNNTWLIVDLPPTKKPIGCKWVYRVKHKQDGSIDRYKARLVAKGYTQVEGLDYLDTF 271
AL +N TW++ L K +GCKWV+ +K+ DGSI+RYKARLVA+G+TQ EG+DY++TF
Sbjct: 961 ALEQNKTWIVESLTEGKNVVGCKWVFTIKYNPDGSIERYKARLVAQGFTQQEGIDYMETF 1020
Query: 272 SPVAKTTTLRLLLALAASQGWFLHQLDVDNAFLHGTLDEEIYMRLPPGVSSPR-----PN 326
SPVAK +++LLL LAA+ GW L Q+DV NAFLHG LDEEIYM LP G + P
Sbjct: 1021 SPVAKFGSVKLLLGLAAATGWSLTQMDVSNAFLHGELDEEIYMSLPQGYTPPTGISLPSK 1080
Query: 327 QVCLLQKSLYGLKQASRQWYNTLVAALKSLGYEQCPHDHTLLLKRTSTSITALLLYVDDV 386
VC L KSLYGLKQASRQWY L + + Q P D+T+ +K + TSI +L+YVDD+
Sbjct: 1081 PVCRLLKSLYGLKQASRQWYKRLSSVFLGANFIQSPADNTMFVKVSCTSIIVVLVYVDDL 1140
Query: 387 LLTGNSFEEIQAVKSFLHSQFRIKDLGDLKFFLGLEVARSAKGICLTQRKYALELLTDAG 446
++ N ++ +K L S+F+IKDLG +FFLGLE+ARS++GI + QRKYA LL D G
Sbjct: 1141 MIASNDSSAVENLKELLRSEFKIKDLGPARFFLGLEIARSSEGISVCQRKYAQNLLEDVG 1200
Query: 447 LLGCKPVRTPMDSTLHLSQTGGTLLDDPTSYRRLVGRLLYLTTTRPDLNYVVQQLSQYLA 506
L GCKP PMD LHL++ GTLL + TSYR LVGRLLYL TRPD+ + V LSQ+L+
Sbjct: 1201 LSGCKPSSIPMDPNLHLTKEMGTLLPNATSYRELVGRLLYLCITRPDITFAVHTLSQFLS 1260
Query: 507 SPTDLHQQAATRVLRYVKGAPGQGLFFSATASLKLQAYSDSDWAGCPDTRRSINGYSIFL 566
+PTD+H QAA +VLRY+KG PGQ D+DW C D+RRS+ G+ I+L
Sbjct: 1261 APTDIHMQAAHKVLRYLKGNPGQ----------------DADWGTCKDSRRSVTGFCIYL 1304
Query: 567 GSSLISWRTKKQTTVSRSSSEAEYRALAAIVCEVQWLSYLFQFLHLRVPFPVPLFCDNQS 626
G+SLI+W++KKQ+ VSRSS+E+EYR+LA CE+ WL L + LH+ + P LFCDN+S
Sbjct: 1305 GTSLITWKSKKQSVVSRSSTESEYRSLAQATCEIIWLQQLLKDLHVTMTCPAKLFCDNKS 1364
Query: 627 AIHIAQNPTFHERTKHIELDCHVVRTKLQAGLIHLLPVSTRDQLADIFTKPLPPSLFPTF 686
A+H+A NP FHERTKHIE+DCH VR +++AG + L V T +QLADI TKPL P F +
Sbjct: 1365 ALHLATNPVFHERTKHIEIDCHTVRDQIKAGKLKTLHVPTGNQLADILTKPLHPGPFHSL 1424
Query: 687 VLKL 690
+ ++
Sbjct: 1425 LKRI 1428
>UniRef100_Q9FX79 Putative retroelement polyprotein [Arabidopsis thaliana]
Length = 1413
Score = 631 bits (1627), Expect = e-179
Identities = 331/692 (47%), Positives = 447/692 (63%), Gaps = 44/692 (6%)
Query: 4 FSFLKTFGSLCYASTLNRNRTKLDPRAQKCVFIGYRHGTKGFLLFDIKSREVLLSRHVLF 63
++ LK+FG LCYAST + R K + RA+ C F+GY G KG+ L D++S + +SR+V+F
Sbjct: 751 YTHLKSFGCLCYASTSPKQRHKFEDRARTCAFLGYPSGYKGYKLLDLESHTIFISRNVVF 810
Query: 64 HETEFPFKTMEHTLDPCASVSLPSFMGSEALDYTPLPQGQTPDPQPQVPEVLPVPQT--- 120
+E FPFKT E+ + P D P P LPV +T
Sbjct: 811 YEDLFPFKTKPAE-------------NEESSVFFPHIYVDRNDSHPSQP--LPVQETSAS 855
Query: 121 ---ATRHSTRSRRVPSHFHDYQLALPSSIAALNSSSKVSSTGIKHPLSSVLSYTNLSPKH 177
A + ++R R P++ DY + +S SST HP+S VLSY++LS +
Sbjct: 856 NVPAEKQNSRVSRPPAYLKDY-----------HCNSVTSSTD--HPISEVLSYSSLSDPY 902
Query: 178 YAFTTNVSSTVEPTTYTQAAQCKEWRDAMDKELEALSRNNTWLIVDLPPTKKPIGCKWVY 237
F V+ EP TY QA Q KEW DAM E+ AL N TW++ LP KK +GCKWVY
Sbjct: 903 MIFINAVNKIPEPHTYAQARQIKEWCDAMGMEITALEDNGTWVVCSLPVGKKAVGCKWVY 962
Query: 238 RVKHKQDGSIDRYKARLVAKGYTQVEGLDYLDTFSPVAKTTTLRLLLALAASQGWFLHQL 297
++K DGS++RYKARLVAKGYTQ EGLDY+DTFSPVAK TT++LL+A+AA++GW L QL
Sbjct: 963 KIKLNADGSLERYKARLVAKGYTQTEGLDYVDTFSPVAKLTTVKLLIAVAAAKGWSLSQL 1022
Query: 298 DVDNAFLHGTLDEEIYMRLPPGVSSPR------PNQVCLLQKSLYGLKQASRQWYNTLVA 351
D+ NAFL+G+LDEEIYM LPPG S PR PN VC L+KSLYGLKQASRQWY
Sbjct: 1023 DISNAFLNGSLDEEIYMTLPPGYS-PRQGDSFPPNAVCRLKKSLYGLKQASRQWYLKFSE 1081
Query: 352 ALKSLGYEQCPHDHTLLLKRTSTSITALLLYVDDVLLTGNSFEEIQAVKSFLHSQFRIKD 411
+LK+LG+ Q DHTL +++ S A+L+YVDD+++ + E + ++ L +++D
Sbjct: 1082 SLKALGFTQSSGDHTLFTRKSKNSYMAVLVYVDDIIIASSCDRETELLRDALQRSSKLRD 1141
Query: 412 LGDLKFFLGLEVARSAKGICLTQRKYALELLTDAGLLGCKPVRTPMDSTLHLSQTGGTLL 471
LG L++FLGLE+AR+ GI + QRKY LELL + GLLGCK PM+ LSQ G L+
Sbjct: 1142 LGTLRYFLGLEIARNTDGISICQRKYTLELLAETGLLGCKSSSVPMEPNQKLSQEDGELI 1201
Query: 472 DDPTSYRRLVGRLLYLTTTRPDLNYVVQQLSQYLASPTDLHQQAATRVLRYVKGAPGQGL 531
DD YR+LVG+L+YLT TRPD+ Y V +L Q+ ++P H +A +++ Y+KG GQGL
Sbjct: 1202 DDAEHYRKLVGKLMYLTFTRPDITYAVHRLCQFTSAPRVPHLKAVYKIIYYLKGTVGQGL 1261
Query: 532 FFSATASLKLQAYSDSDWAGCPDTRRSINGYSIFLGSSLISWRTKKQTTVSRSSSEAEYR 591
F+SA LKL ++DSD++ C D+R+ GY +FLG+SL++W++KKQ +S SS+EAEY+
Sbjct: 1262 FYSANVDLKLSGFADSDFSSCSDSRKLTTGYCMFLGTSLVAWKSKKQEVISMSSAEAEYK 1321
Query: 592 ALAAIVCEVQWLSYLFQFLHLRVPFPVPLFCDNQSAIHIAQNPTFHERTKHIELDCHVVR 651
A++ V E+ WL +L + L + V L+CDN +AIHIA NP FHERTKHIE D H +R
Sbjct: 1322 AMSMAVREMMWLRFLLEDLWIDVSEASVLYCDNTAAIHIANNPVFHERTKHIERDYHHIR 1381
Query: 652 TKLQAGLIHLLPVSTRDQLADIFTKPLPPSLF 683
K+ GLI L V T +QLADI P S+F
Sbjct: 1382 EKIILGLIRTLHVRTENQLADI---PYKSSIF 1410
>UniRef100_Q9FJV3 Retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1475
Score = 631 bits (1627), Expect = e-179
Identities = 329/695 (47%), Positives = 450/695 (64%), Gaps = 35/695 (5%)
Query: 4 FSFLKTFGSLCYASTLNRNRTKLDPRAQKCVFIGYRHGTKGFLLFDIKSREVLLSRHVLF 63
++ LK FG LCY ST + R K PRA+ CVF+GY G KG+ L D+++ + +SRHV+F
Sbjct: 803 YTSLKVFGCLCYESTSPQQRHKFAPRARACVFLGYPSGYKGYKLLDLETNTIHISRHVVF 862
Query: 64 HETEFPFKTMEHTLDPCASVSLPSFMGSEALDYTPLPQGQTPDPQPQVPEVLPVPQTATR 123
+ET FPF + T+ P L P + + P E P
Sbjct: 863 YETVFPFT--DKTIIPRDVFDLVD------------PVHENIENPPSTSESAPKVS---- 904
Query: 124 HSTRSRRVPSHFHDYQLALPSSIAALNSSSKVSSTGIKHPLSSVLSYTNLSPKHYAFTTN 183
S R R P + DY N+ V+ +++PL++ ++YT LS + A+
Sbjct: 905 -SKRESRPPGYLQDY---------FCNAVPDVTKD-VRYPLNAYINYTQLSEEFTAYICA 953
Query: 184 VSSTVEPTTYTQAAQCKEWRDAMDKELEALSRNNTWLIVDLPPTKKPIGCKWVYRVKHKQ 243
V+ EP TY QA + KEW DAM+ E++AL NTW + LP KKPIGCKWV++VK
Sbjct: 954 VNKYPEPCTYAQAKKIKEWLDAMEIEIDALESTNTWSVCSLPQGKKPIGCKWVFKVKLNA 1013
Query: 244 DGSIDRYKARLVAKGYTQVEGLDYLDTFSPVAKTTTLRLLLALAASQGWFLHQLDVDNAF 303
DGS++R+KARLVAKGYTQ EGLDY DTFSPVAK TT++ LL++AA + W LHQLD+ NAF
Sbjct: 1014 DGSLERFKARLVAKGYTQREGLDYYDTFSPVAKMTTVKTLLSVAAIKEWSLHQLDISNAF 1073
Query: 304 LHGTLDEEIYMRLPPGVSSPR-----PNQVCLLQKSLYGLKQASRQWYNTLVAALKSLGY 358
L+G L EEIYM LPPG S + N V LQKSLYGLKQASRQWY + LK LG+
Sbjct: 1074 LNGDLKEEIYMTLPPGYSMKQGGVLPQNPVLKLQKSLYGLKQASRQWYLKFSSTLKKLGF 1133
Query: 359 EQCPHDHTLLLKRTSTSITALLLYVDDVLLTGNSFEEIQAVKSFLHSQFRIKDLGDLKFF 418
++ DHTL + + + ALL+YVDD+++ GN+ E I+ +K L F+++DLG +K+F
Sbjct: 1134 KKSHADHTLFTRISGKAYIALLVYVDDIVIAGNNDENIEELKKDLAKAFKLRDLGPMKYF 1193
Query: 419 LGLEVARSAKGICLTQRKYALELLTDAGLLGCKPVRTPMDSTLHLSQTGGT-LLDDPTSY 477
LGLE+AR+ +GI + QRKY +ELL D GLLGC+P PM+ +L LSQ ++D+P Y
Sbjct: 1194 LGLEIARTKEGISVCQRKYTMELLEDTGLLGCRPSTIPMEPSLKLSQHNDEHVIDNPEVY 1253
Query: 478 RRLVGRLLYLTTTRPDLNYVVQQLSQYLASPTDLHQQAATRVLRYVKGAPGQGLFFSATA 537
RRLVG+L+YLT TRPD+ Y + +L Q+ +SP + H +AA +V+ Y+KG G GLF+S+ +
Sbjct: 1254 RRLVGKLMYLTITRPDITYAINRLCQFSSSPKNSHLKAAQKVVHYLKGTIGLGLFYSSKS 1313
Query: 538 SLKLQAYSDSDWAGCPDTRRSINGYSIFLGSSLISWRTKKQTTVSRSSSEAEYRALAAIV 597
L L+AY+D+DW C D+RRS +G +FLG SLISW++KKQ S SS+E+EYRA+A
Sbjct: 1314 DLCLKAYTDADWGSCVDSRRSTSGICMFLGDSLISWKSKKQNMASSSSAESEYRAMAMGS 1373
Query: 598 CEVQWLSYLFQFLHLRVPFPVPLFCDNQSAIHIAQNPTFHERTKHIELDCHVVRTKLQAG 657
E+ WL L ++ PVPLFCD+ +AIHIA N FHERTKHIE DCH+ R +++ G
Sbjct: 1374 REIAWLVKLLAEFQVKQTKPVPLFCDSTAAIHIANNAVFHERTKHIENDCHITRDRIEQG 1433
Query: 658 LIHLLPVSTRDQLADIFTKPLPPSLFPTFVLKLGL 692
++ + V T QLAD+ TKPL P+LF + + K+ L
Sbjct: 1434 MLKTMHVDTTSQLADVLTKPLFPTLFNSLIGKMSL 1468
>UniRef100_Q9XII7 Putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1454
Score = 627 bits (1618), Expect = e-178
Identities = 329/703 (46%), Positives = 446/703 (62%), Gaps = 39/703 (5%)
Query: 3 VFSFLKTFGSLCYASTLNRNRTKLDPRAQKCVFIGYRHGTKGFLLFDIKSREVLLSRHVL 62
V+ L+TFG LCY+ST + R K PR++ C+F+GY G KG+ L D++S V +SR+V
Sbjct: 774 VYEQLRTFGCLCYSSTSPKQRHKFQPRSRACLFLGYPSGYKGYKLMDLESNTVFISRNVQ 833
Query: 63 FHETEFPFKTMEHTLDPCASVSLPSFMGSEALDYTPLPQG------QTPDPQPQVPEVLP 116
FHE FP +P + SL F P+ G +P P LP
Sbjct: 834 FHEEVFPLAK-----NPGSESSLKLFT-----PMVPVSSGIISDTTHSPSSLPSQISDLP 883
Query: 117 VPQTATRHSTRSRRVPSHFHDYQLALPSSIAALNSSSKVSSTGIKHPLSSVLSYTNLSPK 176
PQ + S R R+ P+H +DY + K+P+SS +SY+ +SP
Sbjct: 884 -PQIS---SQRVRKPPAHLNDYHC-------------NTMQSDHKYPISSTISYSKISPS 926
Query: 177 HYAFTTNVSSTVEPTTYTQAAQCKEWRDAMDKELEALSRNNTWLIVDLPPTKKPIGCKWV 236
H + N++ PT Y +A KEW +A+D E+ A+ + NTW I LP KK +GCKWV
Sbjct: 927 HMCYINNITKIPIPTNYAEAQDTKEWCEAVDAEIGAMEKTNTWEITTLPKGKKAVGCKWV 986
Query: 237 YRVKHKQDGSIDRYKARLVAKGYTQVEGLDYLDTFSPVAKTTTLRLLLALAASQGWFLHQ 296
+ +K DG+++RYKARLVAKGYTQ EGLDY DTFSPVAK TT++LLL ++AS+ WFL Q
Sbjct: 987 FTLKFLADGNLERYKARLVAKGYTQKEGLDYTDTFSPVAKMTTIKLLLKVSASKKWFLKQ 1046
Query: 297 LDVDNAFLHGTLDEEIYMRLPPGVSSPR-----PNQVCLLQKSLYGLKQASRQWYNTLVA 351
LDV NAFL+G L+EEI+M++P G + + N V L++S+YGLKQASRQW+ +
Sbjct: 1047 LDVSNAFLNGELEEEIFMKIPEGYAERKGIVLPSNVVLRLKRSIYGLKQASRQWFKKFSS 1106
Query: 352 ALKSLGYEQCPHDHTLLLKRTSTSITALLLYVDDVLLTGNSFEEIQAVKSFLHSQFRIKD 411
+L SLG+++ DHTL LK +L+YVDD+++ S + L +F+++D
Sbjct: 1107 SLLSLGFKKTHGDHTLFLKMYDGEFVIVLVYVDDIVIASTSEAAAAQLTEELDQRFKLRD 1166
Query: 412 LGDLKFFLGLEVARSAKGICLTQRKYALELLTDAGLLGCKPVRTPMDSTLHLSQTGGTLL 471
LGDLK+FLGLEVAR+ GI + QRKYALELL G+L CKPV PM L + + G L+
Sbjct: 1167 LGDLKYFLGLEVARTTAGISICQRKYALELLQSTGMLACKPVSVPMIPNLKMRKDDGDLI 1226
Query: 472 DDPTSYRRLVGRLLYLTTTRPDLNYVVQQLSQYLASPTDLHQQAATRVLRYVKGAPGQGL 531
+D YRR+VG+L+YLT TRPD+ + V +L Q+ ++P H AA RVL+Y+KG GQGL
Sbjct: 1227 EDIEQYRRIVGKLMYLTITRPDITFAVNKLCQFSSAPRTTHLTAAYRVLQYIKGTVGQGL 1286
Query: 532 FFSATASLKLQAYSDSDWAGCPDTRRSINGYSIFLGSSLISWRTKKQTTVSRSSSEAEYR 591
F+SA++ L L+ ++DSDWA C D+RRS +++F+G SLISWR+KKQ TVSRSS+EAEYR
Sbjct: 1287 FYSASSDLTLKGFADSDWASCQDSRRSTTSFTMFVGDSLISWRSKKQHTVSRSSAEAEYR 1346
Query: 592 ALAAIVCEVQWLSYLFQFLHLRVPFPVPLFCDNQSAIHIAQNPTFHERTKHIELDCHVVR 651
ALA CE+ WL L L P P+ L+ D+ +AI+IA NP FHERTKHI+LDCH VR
Sbjct: 1347 ALALATCEMVWLFTLLVSLQASPPVPI-LYSDSTAAIYIATNPVFHERTKHIKLDCHTVR 1405
Query: 652 TKLQAGLIHLLPVSTRDQLADIFTKPLPPSLFPTFVLKLGLYN 694
+L G + LL V T DQ+ADI TKPL P F K+ + N
Sbjct: 1406 ERLDNGELKLLHVRTEDQVADILTKPLFPYQFEHLKSKMSILN 1448
>UniRef100_Q9SN55 Putative retrotransposon polyprotein [Arabidopsis thaliana]
Length = 1203
Score = 627 bits (1617), Expect = e-178
Identities = 323/704 (45%), Positives = 450/704 (63%), Gaps = 49/704 (6%)
Query: 31 QKCVFIGYRHGTKGFLLFDIKSREVLLSRHVLFHETEFPFKT---MEHTLDPCASVSLPS 87
Q V Y G KG+ + D++S + ++R+V+FHET+FPFKT ++ ++D + LP
Sbjct: 328 QNSVVERYPSGYKGYKVLDLESHSISITRNVVFHETKFPFKTSKFLKESVDMFPNSILPL 387
Query: 88 FMGSEALDYTPLPQ--------GQTPDPQPQVPEVLPVPQTATRHST------------- 126
++ PL T + + P+P T +T
Sbjct: 388 PAPLHFVESMPLDDDLRADDNNASTSNSASSASSIPPLPSTVNTQNTDALDIDTNSVPIA 447
Query: 127 ---RSRRVPSHFHDYQLALPSSIAALNSSSKVSSTGIK--------------HPLSSVLS 169
R+ + P++ +Y +S+ L+S S +ST I+ +P+S+ +S
Sbjct: 448 RPKRNAKAPAYLSEYHC---NSVPFLSSLSPTTSTSIETPSSSIPPKKITTPYPMSTAIS 504
Query: 170 YTNLSPKHYAFTTNVSSTVEPTTYTQAAQCKEWRDAMDKELEALSRNNTWLIVDLPPTKK 229
Y L+P +++ + EP +TQA + ++W A ++EL AL +N TW++ L K
Sbjct: 505 YDKLTPLFHSYICAYNVETEPKAFTQAMKSEKWTRAANEELHALEQNKTWIVESLTEGKN 564
Query: 230 PIGCKWVYRVKHKQDGSIDRYKARLVAKGYTQVEGLDYLDTFSPVAKTTTLRLLLALAAS 289
+GCKWV+ +K+ DGSI+RYKARLVA+G+TQ EG+DY++TFSPVAK +++LLL LAA+
Sbjct: 565 VVGCKWVFTIKYNPDGSIERYKARLVAQGFTQQEGIDYMETFSPVAKFGSVKLLLGLAAA 624
Query: 290 QGWFLHQLDVDNAFLHGTLDEEIYMRLPPGVSSPR-----PNQVCLLQKSLYGLKQASRQ 344
GW L Q+DV NAFLHG LDEEIYM LP G + P VC L KSLYGLKQASRQ
Sbjct: 625 TGWSLTQMDVSNAFLHGELDEEIYMSLPQGYTPPTGISLPSKPVCRLLKSLYGLKQASRQ 684
Query: 345 WYNTLVAALKSLGYEQCPHDHTLLLKRTSTSITALLLYVDDVLLTGNSFEEIQAVKSFLH 404
WY L + + Q P D+T+ +K + TSI +L+YVDD+++ N ++ +K L
Sbjct: 685 WYKRLSSVFLGANFIQSPADNTMFVKVSCTSIIVVLVYVDDLMIASNDSSAVENLKELLR 744
Query: 405 SQFRIKDLGDLKFFLGLEVARSAKGICLTQRKYALELLTDAGLLGCKPVRTPMDSTLHLS 464
S+F+IKDLG +FFLGLE+ARS++GI + QRKYA LL D GL GCKP PMD LHL+
Sbjct: 745 SEFKIKDLGPARFFLGLEIARSSEGISVCQRKYAQNLLEDVGLSGCKPSSIPMDPNLHLT 804
Query: 465 QTGGTLLDDPTSYRRLVGRLLYLTTTRPDLNYVVQQLSQYLASPTDLHQQAATRVLRYVK 524
+ GTLL + TSYR LVGRLLYL TRPD+ + V LSQ+L++PTD+H QAA +VLRY+K
Sbjct: 805 KEMGTLLPNATSYRELVGRLLYLCITRPDITFAVHTLSQFLSAPTDIHMQAAHKVLRYLK 864
Query: 525 GAPGQGLFFSATASLKLQAYSDSDWAGCPDTRRSINGYSIFLGSSLISWRTKKQTTVSRS 584
G PGQGL +SA++ L L +SD+DW C D+RRS+ G+ I+LG+SLI+W++KKQ+ VSRS
Sbjct: 865 GNPGQGLMYSASSELCLNGFSDADWGTCKDSRRSVTGFCIYLGTSLITWKSKKQSVVSRS 924
Query: 585 SSEAEYRALAAIVCEVQWLSYLFQFLHLRVPFPVPLFCDNQSAIHIAQNPTFHERTKHIE 644
S+E+EYR+LA CE+ WL L + LH+ + P LFCDN+SA+H+A NP FHERTKHIE
Sbjct: 925 STESEYRSLAQATCEIIWLQQLLKDLHVTMTCPAKLFCDNKSALHLATNPVFHERTKHIE 984
Query: 645 LDCHVVRTKLQAGLIHLLPVSTRDQLADIFTKPLPPSLFPTFVL 688
+DCH VR +++AG + L V T +QLADI TKPL P P F L
Sbjct: 985 IDCHTVRDQIKAGKLKTLHVPTGNQLADILTKPLHPVQSPIFSL 1028
>UniRef100_O04543 F20P5.25 protein [Arabidopsis thaliana]
Length = 1315
Score = 607 bits (1564), Expect = e-172
Identities = 320/708 (45%), Positives = 446/708 (62%), Gaps = 38/708 (5%)
Query: 4 FSFLKTFGSLCYASTLNRNRTKLDPRAQKCVFIGYRHGTKGFLLFDIKSREVLLSRHVLF 63
+ +K FG LCYAST ++R K PRA+ C FIGY G KG+ L D+++ +++SRHV+F
Sbjct: 624 YDHIKVFGCLCYASTSPKDRHKFSPRAKACAFIGYPSGFKGYKLLDLETHSIIVSRHVVF 683
Query: 64 HETEFPFKTMEHTLDPCASVSLPSFMGSEALDYTPLPQGQT-----PDPQPQVPEVLP-- 116
HE FPF L S +F L+ TP Q Q+ P E+LP
Sbjct: 684 HEELFPF------LGSDLSQEEQNFFPD--LNPTPPMQRQSSDHVNPSDSSSSVEILPSA 735
Query: 117 -----VPQTATRHSTRSRRVPSHFHDYQLALPSSIAALNSSSKVSSTGIKHPLSSVLSYT 171
VP+ + + S R + P++ DY S VSST H + LSY
Sbjct: 736 NPTNNVPEPSVQTSHRKAKKPAYLQDYYC-----------HSVVSST--PHEIRKFLSYD 782
Query: 172 NLSPKHYAFTTNVSSTVEPTTYTQAAQCKEWRDAMDKELEALSRNNTWLIVDLPPTKKPI 231
++ + F + T EP+ YT+A + + WRDAM E + L +TW + LP K+ I
Sbjct: 783 RINDPYLTFLACLDKTKEPSNYTEAEKLQVWRDAMGAEFDFLEGTHTWEVCSLPADKRCI 842
Query: 232 GCKWVYRVKHKQDGSIDRYKARLVAKGYTQVEGLDYLDTFSPVAKTTTLRLLLALAASQG 291
GC+W++++K+ DGS++RYKARLVA+GYTQ EG+DY +TFSPVAK +++LLL +AA
Sbjct: 843 GCRWIFKIKYNSDGSVERYKARLVAQGYTQKEGIDYNETFSPVAKLNSVKLLLGVAARFK 902
Query: 292 WFLHQLDVDNAFLHGTLDEEIYMRLPPGVSSPR-----PNQVCLLQKSLYGLKQASRQWY 346
L QLD+ NAFL+G LDEEIYMRLP G +S + PN VC L+KSLYGLKQASRQWY
Sbjct: 903 LSLTQLDISNAFLNGDLDEEIYMRLPQGYASRQGDSLPPNAVCRLKKSLYGLKQASRQWY 962
Query: 347 NTLVAALKSLGYEQCPHDHTLLLKRTSTSITALLLYVDDVLLTGNSFEEIQAVKSFLHSQ 406
+ L LG+ Q DHT LK + +L+Y+DD+++ N+ + +KS + S
Sbjct: 963 LKFSSTLLGLGFIQSYCDHTCFLKISDGIFLCVLVYIDDIIIASNNDAAVDILKSQMKSF 1022
Query: 407 FRIKDLGDLKFFLGLEVARSAKGICLTQRKYALELLTDAGLLGCKPVRTPMDSTLHLSQT 466
F+++DLG+LK+FLGLE+ RS KGI ++QRKYAL+LL + G LGCKP PMD ++ +
Sbjct: 1023 FKLRDLGELKYFLGLEIVRSDKGIHISQRKYALDLLDETGQLGCKPSSIPMDPSMVFAHD 1082
Query: 467 GGTLLDDPTSYRRLVGRLLYLTTTRPDLNYVVQQLSQYLASPTDLHQQAATRVLRYVKGA 526
G + YRRL+GRL+YL TRPD+ + V +L+Q+ +P H QA ++L+Y+KG
Sbjct: 1083 SGGDFVEVGPYRRLIGRLMYLNITRPDITFAVNKLAQFSMAPRKAHLQAVYKILQYIKGT 1142
Query: 527 PGQGLFFSATASLKLQAYSDSDWAGCPDTRRSINGYSIFLGSSLISWRTKKQTTVSRSSS 586
GQGLF+SAT+ L+L+ Y+++D+ C D+RRS +GY +FLG SLI W+++KQ VS+SS+
Sbjct: 1143 IGQGLFYSATSELQLKVYANADYNSCRDSRRSTSGYCMFLGDSLICWKSRKQDVVSKSSA 1202
Query: 587 EAEYRALAAIVCEVQWLSYLFQFLHLRVPFPVPLFCDNQSAIHIAQNPTFHERTKHIELD 646
EAEYR+L+ E+ WL+ + L + + P LFCDN++AIHIA N FHERTKHIE D
Sbjct: 1203 EAEYRSLSVATDELVWLTNFLKELQVPLSKPTLLFCDNEAAIHIANNHVFHERTKHIESD 1262
Query: 647 CHVVRTKLQAGLIHLLPVSTRDQLADIFTKPLPPSLFPTFVLKLGLYN 694
CH VR +L GL L ++T Q+AD FTKPL PS F + K+GL N
Sbjct: 1263 CHSVRERLLKGLFELYHINTELQIADPFTKPLYPSHFHRLISKMGLLN 1310
>UniRef100_O23588 Retrotransposon like protein [Arabidopsis thaliana]
Length = 1433
Score = 604 bits (1558), Expect = e-171
Identities = 315/698 (45%), Positives = 441/698 (63%), Gaps = 39/698 (5%)
Query: 4 FSFLKTFGSLCYASTLNRNRTKLDPRAQKCVFIGYRHGTKGFLLFDIKSREVLLSRHVLF 63
+ LKTFG LCY+ST + R K +PRA+ CVF+GY G KG+ L DI++ V +SRHV+F
Sbjct: 761 YESLKTFGCLCYSSTSPKQRHKFEPRARACVFLGYPLGYKGYKLLDIETHAVSISRHVIF 820
Query: 64 HETEFPFKTMEHTLDPCASVSLPSFMGSEALDYTPLPQGQTPDPQPQVPEVLPVPQTATR 123
HE FPF + S + + D+ PL Q P + LP+ QT+
Sbjct: 821 HEDIFPF--------------ISSTIKDDIKDFFPLLQF------PARTDDLPLEQTSI- 859
Query: 124 HSTRSRRVPSHFHDYQLALPSSIAALNSSSKVSSTGIKHPLSSVLSYTNLSPKHYAFTTN 183
+ +H H ++ ++ + SK KH L Y N + +AF N
Sbjct: 860 -------IDTHPHQ-DVSSSKALVPFDPLSKRQKKPPKH-LQDFHCYNNTTEPFHAFINN 910
Query: 184 VSSTVEPTTYTQAAQCKEWRDAMDKELEALSRNNTWLIVDLPPTKKPIGCKWVYRVKHKQ 243
+++ V P Y++A K W DAM +E+ A+ R NTW +V LPP KK IGCKWV+ +KH
Sbjct: 911 ITNAVIPQRYSEAKDFKAWCDAMKEEIGAMVRTNTWSVVSLPPNKKAIGCKWVFTIKHNA 970
Query: 244 DGSIDRYKARLVAKGYTQVEGLDYLDTFSPVAKTTTLRLLLALAASQGWFLHQLDVDNAF 303
DGSI+RYKARLVAKGYTQ EGLDY +TFSPVAK T++R++L LAA W +HQLD+ NAF
Sbjct: 971 DGSIERYKARLVAKGYTQEEGLDYEETFSPVAKLTSVRMMLLLAAKMKWSVHQLDISNAF 1030
Query: 304 LHGTLDEEIYMRLPPGVS-----SPRPNQVCLLQKSLYGLKQASRQWYNTLVAALKSLGY 358
L+G LDEEIYM++PPG + + P+ +C L KS+YGLKQASRQWY L LK +G+
Sbjct: 1031 LNGDLDEEIYMKIPPGYADLVGEALPPHAICRLHKSIYGLKQASRQWYLKLSNTLKGMGF 1090
Query: 359 EQCPHDHTLLLKRTSTSITALLLYVDDVLLTGNSFEEIQAVKSFLHSQFRIKDLGDLKFF 418
++ DHTL +K + + +L+YVDD+++ NS + + + L S F+++DLG K+F
Sbjct: 1091 QKSNADHTLFIKYANGVLMGVLVYVDDIMIVSNSDDAVAQFTAELKSYFKLRDLGAAKYF 1150
Query: 419 LGLEVARSAKGICLTQRKYALELLTDAGLLGCKPVRTPMDSTLHLSQTGGTLLDDPTSYR 478
LG+E+ARS KGI + QRKY LELL+ G LG KP P+D ++ L++ G L D TSYR
Sbjct: 1151 LGIEIARSEKGISICQRKYILELLSTTGFLGSKPSSIPLDPSVKLNKEDGVPLTDSTSYR 1210
Query: 479 RLVGRLLYLTTTRPDLNYVVQQLSQYLASPTDLHQQAATRVLRYVKGAPGQGLFFSATAS 538
+LVG+L+YL TRPD+ Y V L Q+ +PT +H A +VLRY+KG GQGLF+SA
Sbjct: 1211 KLVGKLMYLQITRPDIAYAVNTLCQFSHAPTSVHLSAVHKVLRYLKGTVGQGLFYSADDK 1270
Query: 539 LKLQAYSDSDWAGCPDTRRSINGYSIFLGSSLISWRTKKQTTVSRSSSEAEYRALAAIVC 598
L+ Y+DSD+ C D+RR + Y +F+G L+SW++KKQ TVS S++EAE+RA++
Sbjct: 1271 FDLRGYTDSDFGSCTDSRRCVAAYCMFIGDYLVSWKSKKQDTVSMSTAEAEFRAMSQGTK 1330
Query: 599 EVQWLSYLFQFLHLRVPF--PVPLFCDNQSAIHIAQNPTFHERTKHIELDCHVVRTKLQA 656
E+ WLS LF +VPF P L+CDN +A+HI N FHERTK +ELDC+ R +++
Sbjct: 1331 EMIWLSRLFD--DFKVPFIPPAYLYCDNTAALHIVNNSVFHERTKFVELDCYKTREAVES 1388
Query: 657 GLIHLLPVSTRDQLADIFTKPLPPSLFPTFVLKLGLYN 694
G + + V T +Q+AD TK + P+ F + K+G+ N
Sbjct: 1389 GFLKTMFVETGEQVADPLTKAIHPAQFHKLIGKMGVCN 1426
>UniRef100_Q9ZPU4 Putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1501
Score = 590 bits (1520), Expect = e-167
Identities = 327/752 (43%), Positives = 446/752 (58%), Gaps = 60/752 (7%)
Query: 3 VFSFLKTFGSLCYASTLNRNRTKLDPRAQKCVFIGYRHGTKGFLLFDIKSREVLLSRHVL 62
V+S L+ FGS CY + R++ K R++ C+F+GY G KG+ ++DI+ E L+SR V+
Sbjct: 745 VYSQLRVFGSACYVHRVTRDKDKFGQRSRSCIFVGYPFGKKGWKVYDIERNEFLVSRDVI 804
Query: 63 FHETEFPFK-------------------------------------------TMEHTLDP 79
F E FP+ T E LD
Sbjct: 805 FREEVFPYAGVNSSTLASTSLPTVSEDDDWAIPPLEVRGSIDSVETERVVCTTDEVVLDT 864
Query: 80 CASVS-LPS--FMGSEALDYTPL---PQGQ--TPDPQPQVPEVLPVPQTAT--RHSTRSR 129
S S +P+ F+ + +PL P G TP VP P+P + R S R+
Sbjct: 865 SVSDSEIPNQEFVPDDTPPSSPLSVSPSGSPNTPTTPIVVPVASPIPVSPPKQRKSKRAT 924
Query: 130 RVPSHFHDYQLA----LPSSIAALNSSSKVSST---GIKHPLSSVLSYTNLSPKHYAFTT 182
P +DY L PSSI AL + SST PL+ +S S H A+
Sbjct: 925 HPPPKLNDYVLYNAMYTPSSIHALPADPSQSSTVPGKSLFPLTDYVSDAAFSSSHRAYLA 984
Query: 183 NVSSTVEPTTYTQAAQCKEWRDAMDKELEALSRNNTWLIVDLPPTKKPIGCKWVYRVKHK 242
++ VEP + +A Q K W DAM E++AL N TW IVDLPP K IG +WV++ K+
Sbjct: 985 AITDNVEPKHFKEAVQIKVWNDAMFTEVDALEINKTWDIVDLPPGKVAIGSQWVFKTKYN 1044
Query: 243 QDGSIDRYKARLVAKGYTQVEGLDYLDTFSPVAKTTTLRLLLALAASQGWFLHQLDVDNA 302
DG+++RYKARLV +G QVEG DY +TF+PV + TT+R LL A+ W ++Q+DV NA
Sbjct: 1045 SDGTVERYKARLVVQGNKQVEGEDYKETFAPVVRMTTVRTLLRNVAANQWEVYQMDVHNA 1104
Query: 303 FLHGTLDEEIYMRLPPGVSSPRPNQVCLLQKSLYGLKQASRQWYNTLVAALKSLGYEQCP 362
FLHG L+EE+YM+LPPG P++VC L+KSLYGLKQA R W+ L +L G+ Q
Sbjct: 1105 FLHGDLEEEVYMKLPPGFRHSHPDKVCRLRKSLYGLKQAPRCWFKKLSDSLLRFGFVQSY 1164
Query: 363 HDHTLLLKRTSTSITALLLYVDDVLLTGNSFEEIQAVKSFLHSQFRIKDLGDLKFFLGLE 422
D++L + +L+YVDD+L+ GN +Q K +L F +KDLG LK+FLG+E
Sbjct: 1165 EDYSLFSYTRNNIELRVLIYVDDLLICGNDGYMLQKFKDYLSRCFSMKDLGKLKYFLGIE 1224
Query: 423 VARSAKGICLTQRKYALELLTDAGLLGCKPVRTPMDSTLHLSQTGGTLLDDPTSYRRLVG 482
V+R +GI L+QRKYAL+++ D+G LG +P TP++ HL+ G LL DP YRRLVG
Sbjct: 1225 VSRGPEGIFLSQRKYALDVIADSGNLGSRPAHTPLEQNHHLASDDGPLLSDPKPYRRLVG 1284
Query: 483 RLLYLTTTRPDLNYVVQQLSQYLASPTDLHQQAATRVLRYVKGAPGQGLFFSATASLKLQ 542
RLLYL TRP+L+Y V L+Q++ +P + H AA RV+RY+KG+PGQG+ +A L L+
Sbjct: 1285 RLLYLLHTRPELSYSVHVLAQFMQNPREAHFDAALRVVRYLKGSPGQGILLNADPDLTLE 1344
Query: 543 AYSDSDWAGCPDTRRSINGYSIFLGSSLISWRTKKQTTVSRSSSEAEYRALAAIVCEVQW 602
Y DSDW CP TRRSI+ Y + LG S ISW+TKKQ TVS SS+EAEYRA++ + E++W
Sbjct: 1345 VYCDSDWQSCPLTRRSISAYVVLLGGSPISWKTKKQDTVSHSSAEAEYRAMSYALKEIKW 1404
Query: 603 LSYLFQFLHLRVPFPVPLFCDNQSAIHIAQNPTFHERTKHIELDCHVVRTKLQAGLIHLL 662
L L + L + P L+CD+++AIHIA NP FHERTKHIE DCH VR ++ G+I
Sbjct: 1405 LRKLLKELGIEQSTPARLYCDSKAAIHIAANPVFHERTKHIESDCHSVRDAVRDGIITTQ 1464
Query: 663 PVSTRDQLADIFTKPLPPSLFPTFVLKLGLYN 694
V T +QLAD+FTK L + F + KLG+ N
Sbjct: 1465 HVRTTEQLADVFTKALGRNQFLYLMSKLGVQN 1496
>UniRef100_O23302 Retrovirus-related like polyprotein [Arabidopsis thaliana]
Length = 1489
Score = 583 bits (1503), Expect = e-165
Identities = 317/740 (42%), Positives = 439/740 (58%), Gaps = 107/740 (14%)
Query: 4 FSFLKTFGSLCYASTLNRNRTKLDPRAQKCVFIGYRHGTKGFLLFDIKSREVLLSRHVLF 63
+S LK FG LC+ ST RTK PRA+ CVF+GY G KG+ + D++S V +SR+V+F
Sbjct: 794 YSLLKNFGCLCFVSTNAHERTKFTPRARACVFLGYPSGYKGYKVLDLESHSVTVSRNVVF 853
Query: 64 HETEFPFKTME---HTLDPCASVSLPSFMGSEALDYTPL----------PQGQTPDPQPQ 110
E FPFKT E +D + LP ++ PL +T D
Sbjct: 854 KEHVFPFKTSELLNKAVDMFPNSILPLPAPLHFVETMPLIDEDSLIPTTTDSRTADNHAS 913
Query: 111 -----VPEVLPVPQTATR------------HSTRSRRVPSHFHDYQLALPSSIAAL---- 149
+P ++P P + T S R+ R PS+ +Y +L SI+ L
Sbjct: 914 SSSSALPSIIP-PSSNTETQDIDSNAVPITRSKRTTRAPSYLSEYHCSLVPSISTLPPTD 972
Query: 150 ------------NSSSKVSSTGIKHPLSSVLSYTNLSPKHYAFTTNVSSTVEPTTYTQAA 197
+SS +T +P+S+V+SY +P ++ ++ EP T++QA
Sbjct: 973 SSIPIHPLPEIFTASSPKKTT--PYPISTVVSYDKYTPLCQSYIFAYNTETEPKTFSQAM 1030
Query: 198 QCKEWRDAMDKELEALSRNNTWLIVDLPPTKKPIGCKWVYRVKHKQDGSIDRYKARLVAK 257
+ ++W +EL+A+ N TW + LPP K +GCKWV+ +K+ DG+++RYKARLVA+
Sbjct: 1031 KSEKWIRVAVEELQAMELNKTWSVESLPPDKNVVGCKWVFTIKYNPDGTVERYKARLVAQ 1090
Query: 258 GYTQVEGLDYLDTFSPVAKTTTLRLLLALAASQGWFLHQLDVDNAFLHGTLDEEIYMRLP 317
G+TQ EG+D+LDTFSPVAK T+ +++L LAA GW L Q+DV +AFLHG LDEEI+M LP
Sbjct: 1091 GFTQQEGIDFLDTFSPVAKLTSAKMMLGLAAITGWTLTQMDVSDAFLHGDLDEEIFMSLP 1150
Query: 318 PGVSSPR-----PNQVCLLQKSLYGLKQASRQWYNTLVAALKSLGYEQCPHDHTLLLKRT 372
G + P PN VC L KS+YGLKQASRQWY VAAL
Sbjct: 1151 QGYTPPAGTILPPNPVCRLLKSIYGLKQASRQWYKRFVAAL------------------- 1191
Query: 373 STSITALLLYVDDVLLTGNSFEEIQAVKSFLHSQFRIKDLGDLKFFLGLEVARSAKGICL 432
+Y+DD+++ N+ E++ +K+ L S+F+IKDLG +FFLGL
Sbjct: 1192 --------VYIDDIMIASNNDAEVENLKALLRSEFKIKDLGPARFFLGL----------- 1232
Query: 433 TQRKYALELLTDAGLLGCKPVRTPMDSTLHLSQTGGTLLDDPTSYRRLVGRLLYLTTTRP 492
LGCKP PMD TLHL + GT L +PT+YR+L+GRLLYLT TRP
Sbjct: 1233 ---------------LGCKPSSIPMDPTLHLVRDMGTPLPNPTAYRKLIGRLLYLTITRP 1277
Query: 493 DLNYVVQQLSQYLASPTDLHQQAATRVLRYVKGAPGQGLFFSATASLKLQAYSDSDWAGC 552
D+ Y V QLSQ++++P+D+H QAA +VLRY+K PGQGL +SA + L +SD+DWA C
Sbjct: 1278 DITYAVHQLSQFISAPSDIHLQAAHKVLRYIKANPGQGLMYSADYEICLNGFSDADWAAC 1337
Query: 553 PDTRRSINGYSIFLGSSLISWRTKKQTTVSRSSSEAEYRALAAIVCEVQWLSYLFQFLHL 612
DTRRSI+G+ I+LG+SLISW++KKQ SRSS+E+EYR++A CE+ WL L + LH+
Sbjct: 1338 KDTRRSISGFCIYLGTSLISWKSKKQAVASRSSTESEYRSMAQATCEIIWLQQLLKDLHI 1397
Query: 613 RVPFPVPLFCDNQSAIHIAQNPTFHERTKHIELDCHVVRTKLQAGLIHLLPVSTRDQLAD 672
+ P LFCDN+SA+H + NP FHERTKHIE+DCH VR +++AG + L V T +Q AD
Sbjct: 1398 PLTCPAKLFCDNKSALHSSLNPVFHERTKHIEIDCHTVRDQIKAGNLKALHVPTENQHAD 1457
Query: 673 IFTKPLPPSLFPTFVLKLGL 692
I TK L P F + ++ L
Sbjct: 1458 ILTKALHPGPFHHLLRQMSL 1477
>UniRef100_Q9LVQ2 Retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1491
Score = 573 bits (1477), Expect = e-162
Identities = 312/755 (41%), Positives = 439/755 (57%), Gaps = 67/755 (8%)
Query: 7 LKTFGSLCYASTLNRNRTKLDPRAQKCVFIGYRHGTKGFLLFDIKSREVLLSRHVLFHET 66
L+ FGS CYA + R++ K R++ C+F+GY G KG+ ++D+ + E ++SR V+F E
Sbjct: 732 LRVFGSACYAHRVTRDKDKFGERSRLCIFVGYPFGQKGWKVYDLSTNEFIVSRDVVFREN 791
Query: 67 EFPFKTMEHTLDPCASVSLPSFMGSEALDYTPLP-----QGQTPDP------------QP 109
FP+ T E V+ P + L +T L + DP +
Sbjct: 792 VFPYATNEGDTIYTPPVTCPITYDEDWLPFTTLEDRGSDENSLSDPPVCVTDVSESDTEH 851
Query: 110 QVPEVLPVP------------------------------------------QTATRHSTR 127
P+ LP P T R R
Sbjct: 852 DTPQSLPTPVDDPLSPSTSVTPTQTPTNSSSSTSPSTNVSPPQQDTTPIIENTPPRQGKR 911
Query: 128 SRRVPSHFHDYQL----ALPSSIAALNSSSKVSSTGIK----HPLSSVLSYTNLSPKHYA 179
+ + DY L P++ L+ S+ SS+ I+ +PL+ + S H
Sbjct: 912 QVQQLARLKDYILYNASCTPNTPHVLSPSTSQSSSSIQGNSQYPLTDYIFDECFSAGHKV 971
Query: 180 FTTNVSSTVEPTTYTQAAQCKEWRDAMDKELEALSRNNTWLIVDLPPTKKPIGCKWVYRV 239
F +++ EP + +A + K W DAM KE++AL N TW IVDLP K IG +WVY+
Sbjct: 972 FLAAITANDEPKHFKEAVKVKVWNDAMYKEVDALEVNKTWDIVDLPTGKVAIGSQWVYKT 1031
Query: 240 KHKQDGSIDRYKARLVAKGYTQVEGLDYLDTFSPVAKTTTLRLLLALAASQGWFLHQLDV 299
K DG+++RYKARLV +G Q+EG DY +TF+PV K TT+R LL L A+ W ++Q+DV
Sbjct: 1032 KFNADGTVERYKARLVVQGNNQIEGEDYTETFAPVVKMTTVRTLLRLVAANQWEVYQMDV 1091
Query: 300 DNAFLHGTLDEEIYMRLPPGVSSPRPNQVCLLQKSLYGLKQASRQWYNTLVAALKSLGYE 359
NAFLHG L+EE+YM+LPPG P++VC L+KSLYGLKQA R W+ L ALK G+
Sbjct: 1092 HNAFLHGDLEEEVYMKLPPGFRHSHPDKVCRLRKSLYGLKQAPRCWFKKLSDALKRFGFI 1151
Query: 360 QCPHDHTLLLKRTSTSITALLLYVDDVLLTGNSFEEIQAVKSFLHSQFRIKDLGDLKFFL 419
Q D++ +L+YVDD+++ GN +Q K +L F +KDLG LK+FL
Sbjct: 1152 QGYEDYSFFSYSCKGIELRVLVYVDDLIICGNDEYMVQKFKEYLGRCFSMKDLGKLKYFL 1211
Query: 420 GLEVARSAKGICLTQRKYALELLTDAGLLGCKPVRTPMDSTLHLSQTGGTLLDDPTSYRR 479
G+EV+R GI L+QRKYAL++++D+G LG +P TP++ HL+ G LL DP +RR
Sbjct: 1212 GIEVSRGPDGIFLSQRKYALDIISDSGTLGARPAYTPLEQNHHLASDDGPLLQDPKPFRR 1271
Query: 480 LVGRLLYLTTTRPDLNYVVQQLSQYLASPTDLHQQAATRVLRYVKGAPGQGLFFSATASL 539
LVGRLLYL TRP+L+Y V LSQ++ +P + H +AA R++RY+KG+PGQG+ S+ L
Sbjct: 1272 LVGRLLYLLHTRPELSYSVHVLSQFMQAPREAHLEAAMRIVRYLKGSPGQGILLSSNKDL 1331
Query: 540 KLQAYSDSDWAGCPDTRRSINGYSIFLGSSLISWRTKKQTTVSRSSSEAEYRALAAIVCE 599
L+ Y DSD+ CP TRRS++ Y + LG S ISW+TKKQ TVS SS+EAEYRA++ + E
Sbjct: 1332 TLEVYCDSDFQSCPLTRRSLSAYVVLLGGSPISWKTKKQDTVSHSSAEAEYRAMSVALKE 1391
Query: 600 VQWLSYLFQFLHLRVPFPVPLFCDNQSAIHIAQNPTFHERTKHIELDCHVVRTKLQAGLI 659
++WL+ L + L + + P LFCD+++AI IA NP FHERTKHIE DCH VR ++ G+I
Sbjct: 1392 IKWLNKLLKELGITLAAPTRLFCDSKAAISIAANPVFHERTKHIERDCHSVRDAVRDGII 1451
Query: 660 HLLPVSTRDQLADIFTKPLPPSLFPTFVLKLGLYN 694
V T +QLADIFTK L + F + KLG+ N
Sbjct: 1452 TTHHVRTSEQLADIFTKALGRNQFIYLMSKLGIQN 1486
>UniRef100_Q5XWR5 Putative retroelement pol polyprotein-like [Solanum tuberosum]
Length = 1476
Score = 569 bits (1466), Expect = e-160
Identities = 316/710 (44%), Positives = 437/710 (61%), Gaps = 47/710 (6%)
Query: 5 SFLKTFGSLCYASTLNRNRTKLDPRAQKCVFIGYRHGTKGFLLFDIKSREVLLSRHVLFH 64
S+++ G LC+A+ L T+ KG+ L+D++ + +SR ++F+
Sbjct: 771 SYMRVIGCLCHATNLVNTSTQ-----------------KGYKLYDLEHQHFFVSRDMVFN 813
Query: 65 ETEFPFKTMEHTLDPCASVSLPSFMGSEALDYTPLPQGQTPDPQPQVPEVLPVPQTATRH 124
E FPF++ DP + P F+ S P T D P ++ +
Sbjct: 814 EAVFPFQSPA-LADPHDT---PVFLAS------PPCSSHTEDADAVQPAIITSEEIIPVA 863
Query: 125 STRSRRVPSHFH-------DYQLALPSSIAA-LNSSSKVSSTGIKHPLSSVLSYTNLSPK 176
S S H H Y+ P ++S S +P+S + Y+ LS
Sbjct: 864 SPPSAVSDDHLHPPPERRRSYRTGKPPIWQKDFITTSTSRSNHCLYPISDNIDYSCLSST 923
Query: 177 HYAFTTNVSSTVEPTTYTQAAQCKEWRDAMDKELEALSRNNTWLIVDLPPTKKPIGCKWV 236
+ + + S EP Y QAA W AM +E++AL N TW +V LP KK IGCKWV
Sbjct: 924 YQCYIASSSVETEPQFYYQAANDCRWVHAMKEEIQALEDNKTWEVVSLPKGKKAIGCKWV 983
Query: 237 YRVKHKQDGSIDRYKARLVAKGYTQVEGLDYLDTFSPVAKTTTLRLLLALAASQGWFLHQ 296
Y++K+K G I+R+KARLVAKGY Q EGLDY +TFSPV K TLR +L LA S+GW + Q
Sbjct: 984 YKIKYKASGEIERFKARLVAKGYNQKEGLDYQETFSPVVKMVTLRTVLTLAVSKGWDIQQ 1043
Query: 297 LDVDNAFLHGTLDEEIYMRLPPGVSSPRPN--QVCLLQKSLYGLKQASRQWYNTLVAALK 354
+DV NAFL G L EE+YM+LP G + +VC L KSLYGLKQASRQW L AL
Sbjct: 1044 MDVYNAFLQGDLIEEVYMQLPQGFQYDKTGDPKVCRLLKSLYGLKQASRQWNVKLTTALL 1103
Query: 355 SLGYEQCPHDHTLLLKRTSTSITALLLYVDDVLLTGNSFEEIQAVKSFLHSQFRIKDLGD 414
+ G++Q D++L+LKRT+ I +L+YVDD+L+TG+S + I K L + F+IKDLG
Sbjct: 1104 AAGFQQSHLDYSLMLKRTADGIVIVLIYVDDLLITGSSLQLIDDAKQVLKANFKIKDLGT 1163
Query: 415 LKFFLGLEVARSAKGICLTQRKYALELLTDAGLLGCKPVRTPMDS---------TLHLSQ 465
L++FLG+E AR+A G+ + QRKYALEL++D GL G KP TP++ LH+
Sbjct: 1164 LRYFLGMEFARNASGMLMHQRKYALELISDLGLGGSKPSVTPVELHLKLTTREFDLHVGS 1223
Query: 466 TGG-TLLDDPTSYRRLVGRLLYLTTTRPDLNYVVQQLSQYLASPTDLHQQAATRVLRYVK 524
+G +LL DPT Y+RLVGRLLYLT TRPD+++ VQ LSQ++ +P H +AA RV++YVK
Sbjct: 1224 SGADSLLADPTEYQRLVGRLLYLTITRPDISFAVQHLSQFMHAPKVSHMEAAIRVVKYVK 1283
Query: 525 GAPGQGLFFSATASLKLQAYSDSDWAGCPDTRRSINGYSIFLGSSLISWRTKKQTTVSRS 584
APG GL+ + + LQAY D+DW C +TR+SI GY I GS+L+SW++KKQ T+SRS
Sbjct: 1284 QAPGLGLYMAVQTADTLQAYCDADWGSCINTRKSITGYMIQFGSALLSWKSKKQPTISRS 1343
Query: 585 SSEAEYRALAAIVCEVQWLSYLFQFLHLRVPFPVPLFCDNQSAIHIAQNPTFHERTKHIE 644
S+EAEYR+LA+ V E+ WL+ LF+ L + + PV L+CD+++AI IA NP FHERTKHI+
Sbjct: 1344 SAEAEYRSLASTVAELVWLTGLFKELDMPLSLPVSLYCDSKAAIQIAANPVFHERTKHID 1403
Query: 645 LDCHVVRTKLQAGLIHLLPVSTRDQLADIFTKPLPPSLFPTFVLKLGLYN 694
+DCH +R K+QAGL+ + + T++Q ADI TK L + V KLGL N
Sbjct: 1404 IDCHFIREKVQAGLVMIHYLPTQEQPADILTKGLSSAQHSYLVSKLGLKN 1453
>UniRef100_Q9SLF0 Putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1333
Score = 556 bits (1434), Expect = e-157
Identities = 312/724 (43%), Positives = 428/724 (59%), Gaps = 37/724 (5%)
Query: 4 FSFLKTFGSLCYASTLNRNRTKLDPRAQKCVFIGYRHGTKGFLLFDIKSREVLLSRHVLF 63
F L+ FGSLCYA NR K R+++CVF+GY HG KG+ LFD++ E +SR V+F
Sbjct: 609 FDHLRVFGSLCYAHNRNRGGDKFAERSRRCVFVGYPHGQKGWRLFDLEQNEFFVSRDVVF 668
Query: 64 HETEFPFKTM--EHTLDPCASVSLPSFMGSEALDYTPLPQGQTPDPQPQVPEVLPVPQTA 121
E EFPF+ ++ ++ + + L + GQ P P + P+ +A
Sbjct: 669 SELEFPFRISHEQNVIEEEEEALWAPIV--DGLIEEEVHLGQNAGPTPPICVSSPISPSA 726
Query: 122 TRHSTRSRRVPSHFHDYQLALPSSIAALNSSSKVSSTGIKH-PLSSVLSYT--------- 171
T S+RS S D ++ + + ++SS S T ++ PLS T
Sbjct: 727 T--SSRSEHSTSSPLDTEVVPTPATSTTSASSPSSPTNLQFLPLSRAKPTTAQAVAPPAV 784
Query: 172 ----NLSPKHYAFTTNVSSTVEPTTYTQAAQCK--------EWRDAMDK---------EL 210
S ++ A + V TT Q + K + RD + +
Sbjct: 785 PPPRRQSTRNKAPPVTLKDFVVNTTVCQESPSKLNSILYQLQKRDDTRRFSASHTTYVAI 844
Query: 211 EALSRNNTWLIVDLPPTKKPIGCKWVYRVKHKQDGSIDRYKARLVAKGYTQVEGLDYLDT 270
+A N+TW I DLPP K+ IG +WVY+VKH DGS++RYKARLVA G Q EG DY +T
Sbjct: 845 DAQEENHTWTIEDLPPGKRAIGSQWVYKVKHNSDGSVERYKARLVALGNKQKEGEDYGET 904
Query: 271 FSPVAKTTTLRLLLALAASQGWFLHQLDVDNAFLHGTLDEEIYMRLPPGVSSPRPNQVCL 330
F+PVAK T+RL L +A + W +HQ+DV NAFLHG L EE+YM+LPPG + PN+VC
Sbjct: 905 FAPVAKMATVRLFLDVAVKRNWEIHQMDVHNAFLHGDLREEVYMKLPPGFEASHPNKVCR 964
Query: 331 LQKSLYGLKQASRQWYNTLVAALKSLGYEQCPHDHTLLLKRTSTSITALLLYVDDVLLTG 390
L+K+LYGLKQA R W+ L ALK G++Q D++L + +L+YVDD+++TG
Sbjct: 965 LRKALYGLKQAPRCWFEKLTTALKRYGFQQSLADYSLFTLVKGSVRIKILIYVDDLIITG 1024
Query: 391 NSFEEIQAVKSFLHSQFRIKDLGDLKFFLGLEVARSAKGICLTQRKYALELLTDAGLLGC 450
NS Q K +L S F +KDLG LK+FLG+EVARS GI + QRKYAL+++++ GLLG
Sbjct: 1025 NSQRATQQFKEYLASCFHMKDLGPLKYFLGIEVARSTTGIYICQRKYALDIISETGLLGV 1084
Query: 451 KPVRTPMDSTLHLSQTGGTLLDDPTSYRRLVGRLLYLTTTRPDLNYVVQQLSQYLASPTD 510
KP P++ L + LL DP YRRLVGRL+YL TR DL + V L++++ P +
Sbjct: 1085 KPANFPLEQNHKLGLSTSPLLTDPQRYRRLVGRLIYLAVTRLDLAFSVHILARFMQEPRE 1144
Query: 511 LHQQAATRVLRYVKGAPGQGLFFSATASLKLQAYSDSDWAGCPDTRRSINGYSIFLGSSL 570
H AA RV+RY+K PGQG+F + ++ + DSDWAG P +RRS+ GY + G S
Sbjct: 1145 DHWAAALRVVRYLKADPGQGVFLRRSGDFQITGWCDSDWAGDPMSRRSVTGYFVQFGDSP 1204
Query: 571 ISWRTKKQTTVSRSSSEAEYRALAAIVCEVQWLSYLFQFLHLRVPFPVPLFCDNQSAIHI 630
ISW+TKKQ TVS+SS+EAEYRA++ + E+ WL L L + P+ + CD++SAI+I
Sbjct: 1205 ISWKTKKQDTVSKSSAEAEYRAMSFLASELLWLKQLLFSLGVSHVQPMIMCCDSKSAIYI 1264
Query: 631 AQNPTFHERTKHIELDCHVVRTKLQAGLIHLLPVSTRDQLADIFTKPLPPSLFPTFVLKL 690
A NP FHERTKHIE+D H VR + G+I V T QLADIFTKPL F F +KL
Sbjct: 1265 ATNPVFHERTKHIEIDYHFVRDEFVKGVITPRHVGTTSQLADIFTKPLGRDCFSAFRIKL 1324
Query: 691 GLYN 694
G+ N
Sbjct: 1325 GIRN 1328
>UniRef100_O22175 Putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1496
Score = 555 bits (1430), Expect = e-156
Identities = 311/771 (40%), Positives = 444/771 (57%), Gaps = 82/771 (10%)
Query: 4 FSFLKTFGSLCYASTLNRNRTKLDPRAQKCVFIGYRHGTKGFLLFDIKSREVLLSRHVLF 63
+ L++FG LCYA RN+ K R++KCVFIGY HG K + ++D+++ ++ SR V F
Sbjct: 719 YDMLRSFGCLCYAHIRPRNKDKFTSRSRKCVFIGYPHGKKAWRVYDLETGKIFASRDVRF 778
Query: 64 HETEFPFKTMEHTLDPC---------------ASVSLPSFMGSEALDYTPLPQGQTPDPQ 108
HE +P+ T + P S + S + +P G P
Sbjct: 779 HEDIYPYATATQSNVPLPPPTPPMVNDDWFLPISTQVDSTNVDSSSSSSPAQSGSIDQPP 838
Query: 109 PQVPE-----VLPVPQ---TATRHSTRSRRVPSHFHDYQLALPSSIAALNSSSKVSSTGI 160
+ + PVP+ + S+ SR + D + + + + SS SS G+
Sbjct: 839 RSIDQSPSTSTNPVPEEIGSIVPSSSPSRSIDRSTSDLSASDTTELLSTGESSTPSSPGL 898
Query: 161 KHPL--------SSVL---SYTNLSPKHYAFTTNVSSTVE------PTTYT--------- 194
L SVL TN + K + N+ S + PT+ +
Sbjct: 899 PELLGKGCREKKKSVLLKDFVTNTTSKKKTASHNIHSPSQVLPSGLPTSLSADSVSGKTL 958
Query: 195 ------------------------QAAQCKEWRDA---------MDKELEALSRNNTWLI 221
+ + K ++DA M KE++AL N+TW I
Sbjct: 959 YPLSDFLTNSGYSANHIAFMAAILDSNEPKHFKDAILIKEWCEAMSKEIDALEANHTWDI 1018
Query: 222 VDLPPTKKPIGCKWVYRVKHKQDGSIDRYKARLVAKGYTQVEGLDYLDTFSPVAKTTTLR 281
DLP KK I KWVY++K+ DG+++R+KARLV G Q EG+D+ +TF+PVAK TT+R
Sbjct: 1019 TDLPHGKKAISSKWVYKLKYNSDGTLERHKARLVVMGNHQKEGVDFKETFAPVAKLTTVR 1078
Query: 282 LLLALAASQGWFLHQLDVDNAFLHGTLDEEIYMRLPPGVSSPRPNQVCLLQKSLYGLKQA 341
+LA+AA++ W +HQ+DV NAFLHG L+EE+YMRLPPG P++VC L+KSLYGLKQA
Sbjct: 1079 TILAVAAAKDWEVHQMDVHNAFLHGDLEEEVYMRLPPGFKCSDPSKVCRLRKSLYGLKQA 1138
Query: 342 SRQWYNTLVAALKSLGYEQCPHDHTLLLKRTSTSITALLLYVDDVLLTGNSFEEIQAVKS 401
R W++ L AL+++G+ Q D++L + +I +L+YVDD+++ GN+ + I KS
Sbjct: 1139 PRCWFSKLSTALRNIGFTQSYEDYSLFSLKNGDTIIHVLVYVDDLIVAGNNLDAIDRFKS 1198
Query: 402 FLHSQFRIKDLGDLKFFLGLEVARSAKGICLTQRKYALELLTDAGLLGCKPVRTPMDSTL 461
LH F +KDLG LK+FLGLEV+R G CL+QRKYAL+++ + GLLGCKP P+
Sbjct: 1199 QLHKCFHMKDLGKLKYFLGLEVSRGPDGFCLSQRKYALDIVKETGLLGCKPSAVPIALNH 1258
Query: 462 HLSQTGGTLLDDPTSYRRLVGRLLYLTTTRPDLNYVVQQLSQYLASPTDLHQQAATRVLR 521
L+ G + +P YRRLVGR +YLT TRPDL+Y V LSQ++ +P H +AA R++R
Sbjct: 1259 KLASITGPVFTNPEQYRRLVGRFIYLTITRPDLSYAVHILSQFMQAPLVAHWEAALRLVR 1318
Query: 522 YVKGAPGQGLFFSATASLKLQAYSDSDWAGCPDTRRSINGYSIFLGSSLISWRTKKQTTV 581
Y+KG+P QG+F + +SL + AY DSD+ CP TRRS++ Y ++LG S ISW+TKKQ TV
Sbjct: 1319 YLKGSPAQGIFLRSDSSLIINAYCDSDYNACPLTRRSLSAYVVYLGDSPISWKTKKQDTV 1378
Query: 582 SRSSSEAEYRALAAIVCEVQWLSYLFQFLHLRVPFPVPLFCDNQSAIHIAQNPTFHERTK 641
S SS+EAEYRA+A + E++WL L + L + P+ L CD+++AIHIA NP FHERTK
Sbjct: 1379 SYSSAEAEYRAMAYTLKELKWLKALLKDLGVHHSSPMKLHCDSEAAIHIAANPVFHERTK 1438
Query: 642 HIELDCHVVRTKLQAGLIHLLPVSTRDQLADIFTKPLPPSLFPTFVLKLGL 692
HIE DCH VR + LI + T DQ+AD+ TK LP F + LG+
Sbjct: 1439 HIESDCHKVRDAVLDKLITTEHIYTEDQVADLLTKSLPRPTFERLLSTLGV 1489
>UniRef100_Q8L700 Hypothetical protein [Arabidopsis thaliana]
Length = 776
Score = 554 bits (1427), Expect = e-156
Identities = 311/768 (40%), Positives = 443/768 (57%), Gaps = 82/768 (10%)
Query: 7 LKTFGSLCYASTLNRNRTKLDPRAQKCVFIGYRHGTKGFLLFDIKSREVLLSRHVLFHET 66
L++FG LCYA RN+ K R++KCVFIGY HG K + ++D+++ ++ SR V FHE
Sbjct: 2 LRSFGCLCYAHIRPRNKDKFTSRSRKCVFIGYPHGKKAWRVYDLETGKIFASRDVRFHED 61
Query: 67 EFPFKTMEHTLDPC---------------ASVSLPSFMGSEALDYTPLPQGQTPDPQPQV 111
+P+ T + P S + S + +P G P +
Sbjct: 62 IYPYATATQSNVPLPPPTPPMVNDDWFLPISTQVDSTNVDSSSSSSPAQSGSIDQPPRSI 121
Query: 112 PE-----VLPVPQ---TATRHSTRSRRVPSHFHDYQLALPSSIAALNSSSKVSSTGIKHP 163
+ PVP+ + S+ SR + D + + + + SS SS G+
Sbjct: 122 DQSPSTSTNPVPEEIGSIVPSSSPSRSIDRSTSDLSASDTTELLSTGESSTPSSPGLPEL 181
Query: 164 L--------SSVL---SYTNLSPKHYAFTTNVSSTVE------PTTYT------------ 194
L SVL TN + K + N+ S + PT+ +
Sbjct: 182 LGKGCREKKKSVLLKDFVTNTTSKKKTASHNIHSPSQVLPSGLPTSLSADSVSGKTLYPL 241
Query: 195 ---------------------QAAQCKEWRDA---------MDKELEALSRNNTWLIVDL 224
+ + K ++DA M KE++AL N+TW I DL
Sbjct: 242 SDFLTNSGYSANHIAFMAAILDSNEPKHFKDAILIKEWCEAMSKEIDALEANHTWDITDL 301
Query: 225 PPTKKPIGCKWVYRVKHKQDGSIDRYKARLVAKGYTQVEGLDYLDTFSPVAKTTTLRLLL 284
P KK I KWVY++K+ DG+++R+KARLV G Q EG+D+ +TF+PVAK TT+R +L
Sbjct: 302 PHGKKAISSKWVYKLKYNSDGTLERHKARLVVMGNHQKEGVDFKETFAPVAKLTTVRTIL 361
Query: 285 ALAASQGWFLHQLDVDNAFLHGTLDEEIYMRLPPGVSSPRPNQVCLLQKSLYGLKQASRQ 344
A+AA++ W +HQ+DV NAFLHG L+EE+YMRLPPG P++VC L+KSLYGLKQA R
Sbjct: 362 AVAAAKDWEVHQMDVHNAFLHGDLEEEVYMRLPPGFKCSDPSKVCRLRKSLYGLKQAPRC 421
Query: 345 WYNTLVAALKSLGYEQCPHDHTLLLKRTSTSITALLLYVDDVLLTGNSFEEIQAVKSFLH 404
W++ L AL+++G+ Q D++L + +I +L+YVDD+++ GN+ + I KS LH
Sbjct: 422 WFSKLSTALRNIGFTQSYEDYSLFSLKNGDTIIHVLVYVDDLIVAGNNLDAIDRFKSQLH 481
Query: 405 SQFRIKDLGDLKFFLGLEVARSAKGICLTQRKYALELLTDAGLLGCKPVRTPMDSTLHLS 464
F +KDLG LK+FLGLEV+R G CL+QRKYAL+++ + GLLGCKP P+ L+
Sbjct: 482 KCFHMKDLGKLKYFLGLEVSRGPDGFCLSQRKYALDIVKETGLLGCKPSAVPIALNHKLA 541
Query: 465 QTGGTLLDDPTSYRRLVGRLLYLTTTRPDLNYVVQQLSQYLASPTDLHQQAATRVLRYVK 524
G + +P YRRLVGR +YLT TRPDL+Y V LSQ++ +P H +AA R++RY+K
Sbjct: 542 SITGPVFTNPEQYRRLVGRFIYLTITRPDLSYAVHILSQFMQAPLVAHWEAALRLVRYLK 601
Query: 525 GAPGQGLFFSATASLKLQAYSDSDWAGCPDTRRSINGYSIFLGSSLISWRTKKQTTVSRS 584
G+P QG+F + +SL + AY DSD+ CP TRRS++ Y ++LG S ISW+TKKQ TVS S
Sbjct: 602 GSPAQGIFLRSDSSLIINAYCDSDYNACPLTRRSLSAYVVYLGDSPISWKTKKQDTVSYS 661
Query: 585 SSEAEYRALAAIVCEVQWLSYLFQFLHLRVPFPVPLFCDNQSAIHIAQNPTFHERTKHIE 644
S+EAEYRA+A + E++WL L + L + P+ L CD+++AIHIA NP FHERTKHIE
Sbjct: 662 SAEAEYRAMAYTLKELKWLKALLKDLGVHHSSPMKLHCDSEAAIHIAANPVFHERTKHIE 721
Query: 645 LDCHVVRTKLQAGLIHLLPVSTRDQLADIFTKPLPPSLFPTFVLKLGL 692
DCH VR + LI + T DQ+AD+ TK LP F + LG+
Sbjct: 722 SDCHKVRDAVLDKLITTEHIYTEDQVADLLTKSLPRPTFERLLSTLGV 769
>UniRef100_O65468 Hypothetical protein F21P8.50 [Arabidopsis thaliana]
Length = 1240
Score = 546 bits (1408), Expect = e-154
Identities = 284/594 (47%), Positives = 386/594 (64%), Gaps = 25/594 (4%)
Query: 107 PQPQVPEVLPVPQTATRHSTRSRRVPSHFHDYQLALPSSIAALNSSSKVSSTGIKHPLSS 166
P + +P P T H R R P++ DY S+A+L H +S
Sbjct: 18 PSANIQNDVPEPSVHTSH--RRTRKPAYLQDYYC---HSVASLTI----------HDISQ 62
Query: 167 VLSYTNLSPKHYAFTTNVSSTVEPTTYTQAAQCKEWRDAMDKELEALSRNNTWLIVDLPP 226
LSY +SP +++F ++ EP+TY +A + W AMD E+ A+ +TW I LPP
Sbjct: 63 FLSYEKVSPLYHSFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPP 122
Query: 227 TKKPIGCKWVYRVKHKQDGSIDRYKARLVAKGYTQVEGLDYLDTFSPVAKTTTLRLLLAL 286
KKPIGCKWVY++K+ DG+I+RYKARLVAKGYTQ EG+D+++TFSPV K T+++L+LA+
Sbjct: 123 NKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAI 182
Query: 287 AASQGWFLHQLDVDNAFLHGTLDEEIYMRLPPGVSSPR-----PNQVCLLQKSLYGLKQA 341
+A + LHQLD+ NAFL+G LDEEIYM+LPPG ++ + PN VC L+KS+YGLKQA
Sbjct: 183 SAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQA 242
Query: 342 SRQWYNTLVAALKSLGYEQCPHDHTLLLKRTSTSITALLLYVDDVLLTGNSFEEIQAVKS 401
SRQW+ L G+ Q DHT LK T+T +L+YVDD+++ N+ + +KS
Sbjct: 243 SRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKS 302
Query: 402 FLHSQFRIKDLGDLKFFLGLEVARSAKGICLTQRKYALELLTDAGLLGCKPVRTPMDSTL 461
L S F+++DLG LK+FLGLE+ARSA GI + QRKYAL+LL + GLLGCKP PMD ++
Sbjct: 303 QLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSV 362
Query: 462 HLSQTGGTLLDDPTSYRRLVGRLLYLTTTRPDLNYVVQQLSQYLASPTDLHQQAATRVLR 521
S G D +YRRL+GRL+YL TR D+++ V +LSQ+ +P HQQA ++L
Sbjct: 363 TFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILH 422
Query: 522 YVKGAPGQGLFFSATASLKLQAYSDSDWAGCPDTRRSINGYSIFLGSSLISWRTKKQTTV 581
Y+KG GQGLF+S+ A ++LQ +SD+ + C DTRRS NGY +FLG+SLISW++KKQ V
Sbjct: 423 YIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVV 482
Query: 582 SRSSSEAEYRALAAIVCEVQWLSYLFQFLHLRVPFPVPLFCDNQSAIHIAQNPTFHERTK 641
S+SS+EAEYRAL+ E+ WL+ F+ L L + P LFCDN +AIHIA N FHERTK
Sbjct: 483 SKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTK 542
Query: 642 HIELDCHVVRTK--LQAGLIHLLPVSTRDQLADIFTKPLPPSLFPTFVLKLGLY 693
HIE DCH VR + QA L + D FT+ L P L T + + ++
Sbjct: 543 HIESDCHSVRERSVYQATLSYSFQAYDEQ---DGFTEYLSPILRGTIMYIVSMF 593
>UniRef100_Q9FLR2 Polyprotein-like [Arabidopsis thaliana]
Length = 509
Score = 536 bits (1381), Expect = e-151
Identities = 262/492 (53%), Positives = 351/492 (71%), Gaps = 4/492 (0%)
Query: 205 AMDKELEALSRNNTWLIVDLPPTKKPIGCKWVYRVKHKQDGSIDRYKARLVAKGYTQVEG 264
AM+ EL + N TW +V LPP K +GCKWVY +++ DGSI+RYKARLVAKG+TQ EG
Sbjct: 2 AMNVELGVMELNKTWSVVSLPPNKNVVGCKWVYTIEYNADGSIERYKARLVAKGFTQQEG 61
Query: 265 LDYLDTFSPVAKTTTLRLLLALAASQGWFLHQLDVDNAFLHGTLDEEIYMRLPPGVS--- 321
+DY DTFSPVAK +++L+L L A +GW Q+DV NAFLH L+EEIYM L G +
Sbjct: 62 VDYFDTFSPVAKLASVKLVLGLVARKGWSTTQMDVTNAFLHSDLEEEIYMSLAQGYTPSS 121
Query: 322 -SPRPNQVCLLQKSLYGLKQASRQWYNTLVAALKSLGYEQCPHDHTLLLKRTSTSITALL 380
S PN VC L KS+YGLKQASRQWY L L G++Q D+TL +K TST+I A+L
Sbjct: 122 GSLPPNPVCRLHKSIYGLKQASRQWYKCLSQTLLDDGFQQSYVDNTLFVKITSTAIVAML 181
Query: 381 LYVDDVLLTGNSFEEIQAVKSFLHSQFRIKDLGDLKFFLGLEVARSAKGICLTQRKYALE 440
+YVDD+L+ N+ E + AVKS L ++++IKDLG KFFLGLE+AR++ GI + QRKY L+
Sbjct: 182 IYVDDILIVSNNDEVVCAVKSVLAARYKIKDLGPAKFFLGLEIARNSDGISICQRKYCLD 241
Query: 441 LLTDAGLLGCKPVRTPMDSTLHLSQTGGTLLDDPTSYRRLVGRLLYLTTTRPDLNYVVQQ 500
LL ++GLLGCKP PMD + L++ GTLL+D YR L+GRLLYL TRPD+ + V
Sbjct: 242 LLANSGLLGCKPKSVPMDPKVVLTKDLGTLLEDGRPYRELIGRLLYLCVTRPDITFAVHN 301
Query: 501 LSQYLASPTDLHQQAATRVLRYVKGAPGQGLFFSATASLKLQAYSDSDWAGCPDTRRSIN 560
LSQ+L+ PT++H AA +VL+Y+K PGQGLF SA L L ++D+DW C D+RRS++
Sbjct: 302 LSQFLSCPTNVHLHAAHQVLKYLKNNPGQGLFSSAGTELYLNGFADADWGTCLDSRRSVS 361
Query: 561 GYSIFLGSSLISWRTKKQTTVSRSSSEAEYRALAAIVCEVQWLSYLFQFLHLRVPFPVPL 620
G +FLG+SLI+W++KKQ S SS+EAEYR++A E+ WL+ + + LH+ + F V L
Sbjct: 362 GVCVFLGTSLITWKSKKQEVASGSSTEAEYRSMAVATKELLWLAQMLKDLHVEMEFQVKL 421
Query: 621 FCDNQSAIHIAQNPTFHERTKHIELDCHVVRTKLQAGLIHLLPVSTRDQLADIFTKPLPP 680
FCDN+SA+HIA N FHERTKH+E+DCH R +++ G + +L V T +QLADI TK L P
Sbjct: 422 FCDNKSAMHIANNSVFHERTKHVEIDCHTTRDRVKNGFLKVLHVDTENQLADILTKALQP 481
Query: 681 SLFPTFVLKLGL 692
F + + +L +
Sbjct: 482 GPFRSILGRLSV 493
>UniRef100_Q8S805 Putative copia-type polyprotein [Oryza sativa]
Length = 1803
Score = 533 bits (1373), Expect = e-150
Identities = 291/685 (42%), Positives = 397/685 (57%), Gaps = 12/685 (1%)
Query: 4 FSFLKTFGSLCYASTLNRNRTKLDPRAQKCVFIGYRHGTKGFLLFDIKSREVLLSRHVLF 63
+ L+ FG LCY +T+ KL PR+ CVFIGY +G+ +D+ SR V SRHV F
Sbjct: 718 YDHLRVFGCLCYPNTIATAPHKLSPRSLACVFIGYPADHRGYRCYDMVSRRVFTSRHVTF 777
Query: 64 HETEFPFKTMEHTLDPCASVSLPSFMGSEALDYTPLPQGQTPDPQPQVPEVLPVPQTATR 123
E FPF+ P S P G + + P P P P +
Sbjct: 778 VEDVFPFRDAP---SPRPSAPPPPDHGDDTIVLLPAPAQHVVTPVGTAPAHDAASPPSPA 834
Query: 124 HSTRSRRVPSHFHDYQLALPSSIAALNSSSKVSSTGIKHPLSSVLSYTNLSPK-HYAFTT 182
ST S P+H +A P S +SS S++ +H +++ P YA T
Sbjct: 835 SSTPSSAAPAH----DVAPPPSP---ETSSPASASPPRHAMTTRARAGISKPNPRYAMTA 887
Query: 183 NVSSTVEPTTYTQAAQCKEWRDAMDKELEALSRNNTWLIVDLPPTKKPIGCKWVYRVKHK 242
+ + P++ A + WR AM E +AL N TW +V PP + I KWV++ K
Sbjct: 888 TSTLSPTPSSVRVALRDPNWRAAMQAEFDALLANRTWTLVPRPPGARIITGKWVFKTKLH 947
Query: 243 QDGSIDRYKARLVAKGYTQVEGLDYLDTFSPVAKTTTLRLLLALAASQGWFLHQLDVDNA 302
DGS+D+YKAR V +G+ Q G+D+ +TFSPV K T+R +L L +S+ W HQLDV NA
Sbjct: 948 ADGSLDKYKARWVVRGFNQRPGVDFGETFSPVVKPATIRTVLTLISSKQWPAHQLDVSNA 1007
Query: 303 FLHGTLDEEIYMRLPPGVS-SPRPNQVCLLQKSLYGLKQASRQWYNTLVAALKSLGYEQC 361
FLHG L E + + P G + RP VCLL +SLYGL+QA R W+ SLG+ Q
Sbjct: 1008 FLHGHLQERVLCQQPTGFEDAARPADVCLLSRSLYGLRQAPRAWFKRFADHATSLGFVQS 1067
Query: 362 PHDHTLLLKRTSTSITALLLYVDDVLLTGNSFEEIQAVKSFLHSQFRIKDLGDLKFFLGL 421
D +L + R + LLLYVDD++L+ +S +Q + L ++F++KD+G LK+FLG+
Sbjct: 1068 RADPSLFVLRRGSDTAYLLLYVDDMILSASSSSLLQRIIDRLQAEFKVKDMGPLKYFLGI 1127
Query: 422 EVARSAKGICLTQRKYALELLTDAGLLGCKPVRTPMDSTLHLSQTGGTLLDDPTSYRRLV 481
EV R+A G L+Q KYA ++L AG+ CK V TP D+ LS G L D + YR +
Sbjct: 1128 EVQRTADGFVLSQSKYATDVLERAGMANCKAVATPADAKPKLSSDEGPLFQDSSWYRSIA 1187
Query: 482 GRLLYLTTTRPDLNYVVQQLSQYLASPTDLHQQAATRVLRYVKGAPGQGLFFSATASLKL 541
G L YLT TRPD+ Y VQQ+ ++ +P + H R+LRY+KG GL A+ S L
Sbjct: 1188 GALQYLTLTRPDIAYAVQQVCLHMHAPREAHVTLLKRILRYIKGTAAFGLHLRASTSPTL 1247
Query: 542 QAYSDSDWAGCPDTRRSINGYSIFLGSSLISWRTKKQTTVSRSSSEAEYRALAAIVCEVQ 601
A+SD+DWAGCPDTRRS +G+ IFLG SLISW +K+QTTVSRSS+EAEYR +A V E
Sbjct: 1248 TAFSDADWAGCPDTRRSTSGFCIFLGDSLISWSSKRQTTVSRSSAEAEYRGVANAVAECT 1307
Query: 602 WLSYLFQFLHLRVPFPVPLFCDNQSAIHIAQNPTFHERTKHIELDCHVVRTKLQAGLIHL 661
WL L LH RVP +CDN S++++++NP H+RTKHIELD H VR K+ G + +
Sbjct: 1308 WLRQLLGELHCRVPQATIAYCDNISSVYMSKNPVHHKRTKHIELDIHFVREKVALGELRV 1367
Query: 662 LPVSTRDQLADIFTKPLPPSLFPTF 686
LP+ + Q AD+FTK LP S+F F
Sbjct: 1368 LPIPSAHQFADVFTKGLPSSMFNEF 1392
>UniRef100_Q5XWR3 Putative polyprotein [Solanum tuberosum]
Length = 1280
Score = 524 bits (1350), Expect = e-147
Identities = 268/539 (49%), Positives = 360/539 (66%), Gaps = 2/539 (0%)
Query: 155 VSSTGIKHPLS-SVLSYTNLSPKHYAFTTNVSSTVEPTTYTQAAQCKEWRDAMDKELEAL 213
VS T + P S ++ S+T LS + ++SS EP ++ +A + W AM+ EL AL
Sbjct: 692 VSPTILTPPRSPNIFSFTALSVPNQNIIHSLSSITEPKSFDEACKHSGWHKAMETELAAL 751
Query: 214 SRNNTWLIVDLPPTKKPIGCKWVYRVKHKQDGSIDRYKARLVAKGYTQVEGLDYLDTFSP 273
N TW +V+LPP K+P+ CKWVY+VKH DGSI+R KARLV +G Q EG+D+ +TFSP
Sbjct: 752 HLNGTWEVVELPPGKRPLPCKWVYKVKHNSDGSIERLKARLVVRGDIQKEGIDFSETFSP 811
Query: 274 VAKTTTLRLLLALAASQGWFLHQLDVDNAFLHGTLDEEIYMRLPPGVSSPRPNQVCLLQK 333
V K TT+R LL +A +GW + QLDV+NAFLHG L EE+YMR PPG P PN VCLL+K
Sbjct: 812 VVKITTIRCLLTIAIKKGWRMSQLDVNNAFLHGELHEEVYMRFPPGFPPPSPNHVCLLRK 871
Query: 334 SLYGLKQASRQWYNTLVAALKSLGYEQCPHDHTLLLKRTSTSITALLLYVDDVLLTGNSF 393
SLYGLKQASRQWY L AL GY +D++L K I+ L++YVDD+LLTG+
Sbjct: 872 SLYGLKQASRQWYARLAGALAYKGYSSSLNDYSLFFKTNGALISILVVYVDDILLTGSDT 931
Query: 394 EEIQAVKSFLHSQFRIKDLGDLKFFLGLEVARSAKGICLTQRKYALELLTDAGLLGCKPV 453
EI ++ FL+S+FR+K+LGD+ +FLG+EV R +G L+QRK+ +LL + G V
Sbjct: 932 SEIASITDFLNSEFRVKNLGDIHYFLGIEVIRERQGFILSQRKFTQDLLGEFDSSG-SLV 990
Query: 454 RTPMDSTLHLSQTGGTLLDDPTSYRRLVGRLLYLTTTRPDLNYVVQQLSQYLASPTDLHQ 513
+P+D L G L+++PT YR LVG+L YLT TR DL++ V LSQY+ PT H
Sbjct: 991 SSPLDPYSTLQHDDGPLMENPTLYRTLVGKLNYLTHTRLDLSFAVLCLSQYMQRPTVSHF 1050
Query: 514 QAATRVLRYVKGAPGQGLFFSATASLKLQAYSDSDWAGCPDTRRSINGYSIFLGSSLISW 573
AA RVLRY+K PGQG+ S+ S L + D+DWA C DTRRS++G+ I LG + ISW
Sbjct: 1051 SAALRVLRYLKSDPGQGILLSSYPSFDLLDFCDADWASCKDTRRSVSGFFITLGGAPISW 1110
Query: 574 RTKKQTTVSRSSSEAEYRALAAIVCEVQWLSYLFQFLHLRVPFPVPLFCDNQSAIHIAQN 633
++KKQ +VS SS+EAE R++ + E+ WL L + L + PVP+ D+++AIHIA+N
Sbjct: 1111 KSKKQASVSLSSAEAEXRSMRRVTAELTWLVRLLEDLSVPPDLPVPVHSDSKAAIHIARN 1170
Query: 634 PTFHERTKHIELDCHVVRTKLQAGLIHLLPVSTRDQLADIFTKPLPPSLFPTFVLKLGL 692
P FHERTKH++LDCH VR + +GLI L V + QLAD+FTKPL + KLG+
Sbjct: 1171 PVFHERTKHVDLDCHFVRQQFLSGLISLSFVPSEGQLADLFTKPLNGGSHQRLLDKLGV 1229
>UniRef100_Q7X6S0 OSJNBb0011N17.2 protein [Oryza sativa]
Length = 1262
Score = 523 bits (1346), Expect = e-147
Identities = 254/522 (48%), Positives = 357/522 (67%), Gaps = 2/522 (0%)
Query: 158 TGIKHPLSSVLSYTNLSPKHYAFTTNVSSTVEPTTYTQAAQCKEWRDAMDKELEALSRNN 217
+G ++ +++ +SYT+LS + AF +++S + P + +A Q W AM ELEAL +N
Sbjct: 721 SGDENDIANYVSYTSLSSTYKAFVASLNSAIIPKDWKEAKQDPRWHQAMLDELEALEKNK 780
Query: 218 TWLIVDLPPTKKPIGCKWVYRVKHKQDGSIDRYKARLVAKGYTQVEGLDYLDTFSPVAKT 277
TW +V P KK + CKWVY VK DG ++RYKARLVAKGY+Q G+DY +TF+PVAK
Sbjct: 781 TWDLVSYPNGKKVVNCKWVYAVKQNPDGKVERYKARLVAKGYSQTYGIDYDETFAPVAKM 840
Query: 278 TTLRLLLALAASQGWFLHQLDVDNAFLHGTLDEEIYMRLPPGVSSPRPN-QVCLLQKSLY 336
+T+R +++ A + W LHQLDV NAFLHG L EE+YM +PPG ++ + +V L+KSLY
Sbjct: 841 STVRTIISCAVNFDWPLHQLDVKNAFLHGDLQEEVYMEIPPGFATLQTKGKVLRLKKSLY 900
Query: 337 GLKQASRQWYNTLVAALKSLGYEQCPHDHTLLLKRTSTSITALLLYVDDVLLTGNSFEEI 396
GLKQ+ R W++ A+ ++GY+QC DHT+ + IT L +YVDD+++TGN EI
Sbjct: 901 GLKQSPRAWFDRFRRAMCAMGYKQCNGDHTVFYHHSGDHITILAVYVDDMIITGNDCSEI 960
Query: 397 QAVKSFLHSQFRIKDLGDLKFFLGLEVARSAKGICLTQRKYALELLTDAGLLGCKPVRTP 456
+K L +F +KDLG LK+FLG+E+ARS +GI L+QRKYAL+LL+D G+LGC+P TP
Sbjct: 961 TRLKQNLSKEFEVKDLGQLKYFLGIEIARSPRGIVLSQRKYALDLLSDTGMLGCRPASTP 1020
Query: 457 MDSTLHLSQTGGTLLDDPTSYRRLVGRLLYLTTTRPDLNYVVQQLSQYLASPTDLHQQAA 516
+D L G ++ Y+RLVGRL+YL TRPD+ Y V +S+Y+ P H A
Sbjct: 1021 VDQNHKLCAESGNPVNKER-YQRLVGRLIYLCHTRPDITYAVSMVSRYMHDPRSGHMDAV 1079
Query: 517 TRVLRYVKGAPGQGLFFSATASLKLQAYSDSDWAGCPDTRRSINGYSIFLGSSLISWRTK 576
R+LRY+KG+PG+GL+F L+++ Y D+DWA CPD RRS +GY +F+G +L+SWR+K
Sbjct: 1080 YRILRYLKGSPGKGLWFKKNGHLEVEGYCDADWASCPDDRRSTSGYCVFVGGNLVSWRSK 1139
Query: 577 KQTTVSRSSSEAEYRALAAIVCEVQWLSYLFQFLHLRVPFPVPLFCDNQSAIHIAQNPTF 636
KQ VSRS++EAEYRA++ + E+ WL L L L V P+ L+CDN+SAI IA NP
Sbjct: 1140 KQPVVSRSTAEAEYRAMSVSLSELLWLRNLLSELMLPVDTPMKLWCDNKSAISIANNPVQ 1199
Query: 637 HERTKHIELDCHVVRTKLQAGLIHLLPVSTRDQLADIFTKPL 678
H+RTKH+ELD ++ KL G++ L V + Q+AD FTK L
Sbjct: 1200 HDRTKHVELDRFFIKEKLDEGVLELEFVMSGGQVADCFTKGL 1241
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.321 0.135 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,143,971,350
Number of Sequences: 2790947
Number of extensions: 47492993
Number of successful extensions: 129761
Number of sequences better than 10.0: 1579
Number of HSP's better than 10.0 without gapping: 1404
Number of HSP's successfully gapped in prelim test: 175
Number of HSP's that attempted gapping in prelim test: 124881
Number of HSP's gapped (non-prelim): 2425
length of query: 694
length of database: 848,049,833
effective HSP length: 134
effective length of query: 560
effective length of database: 474,062,935
effective search space: 265475243600
effective search space used: 265475243600
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 78 (34.7 bits)
Lotus: description of TM0260.2