BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0247.1
(323 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q7XP45 OSJNBa0063G07.6 protein [Oryza sativa] 84 7e-15
UniRef100_Q8H851 Putative Zea mays retrotransposon Opie-2 [Oryza... 83 1e-14
UniRef100_Q7X7G6 OSJNBb0006N15.2 protein [Oryza sativa] 83 1e-14
UniRef100_Q8LMY8 Putative polyprotein [Oryza sativa] 82 1e-14
UniRef100_Q75LG0 Putative integrase [Oryza sativa] 82 2e-14
UniRef100_Q7XH50 Putative copia-type pol polyprotein [Oryza sativa] 82 3e-14
UniRef100_Q947Z9 Putative retroelement [Oryza sativa] 82 3e-14
UniRef100_Q60DR2 Putative polyprotein [Oryza sativa] 81 3e-14
UniRef100_Q6AUQ5 Putative polyprotein [Oryza sativa] 80 7e-14
UniRef100_Q8H7T1 Putative Zea mays retrotransposon Opie-2 [Oryza... 80 7e-14
UniRef100_Q852C7 Putative gag-pol polyprotein [Oryza sativa] 80 7e-14
UniRef100_Q7XPI7 OSJNBb0004A17.2 protein [Oryza sativa] 80 7e-14
UniRef100_Q688I4 Putative polyprotein [Oryza sativa] 80 7e-14
UniRef100_Q94GR9 Putative gag-pol polyprotein [Oryza sativa] 80 7e-14
UniRef100_Q851U4 Putative copia-type retrotransposon protein [Or... 80 1e-13
UniRef100_Q8S5D7 Putative gag-pol polyprotein [Oryza sativa] 79 1e-13
UniRef100_Q8SAZ8 Putative polyprotein [Oryza sativa] 79 2e-13
UniRef100_Q7XW17 OSJNBb0013O03.1 protein [Oryza sativa] 79 2e-13
UniRef100_Q9SKW9 F5J5.1 [Arabidopsis thaliana] 79 2e-13
UniRef100_Q7XW16 OSJNBb0013O03.2 protein [Oryza sativa] 78 3e-13
>UniRef100_Q7XP45 OSJNBa0063G07.6 protein [Oryza sativa]
Length = 1539
Score = 83.6 bits (205), Expect = 7e-15
Identities = 49/177 (27%), Positives = 89/177 (49%), Gaps = 9/177 (5%)
Query: 28 HYSAKPPVFDGEKFDYCKDRIENFFLRFDTDLWDIVVYGYTRLVDEDGVKIPREKMNGDQ 87
++ K P+F+G + K ++ +W IV G+ I +
Sbjct: 6 NHVGKAPMFNGTNYSTWKIKMSTHLKAMSFHIWSIVDVGFA---------ITGTPLTEID 56
Query: 88 KKKYKDHHRARTILLNAISYEEYEKITDRESAKSIFDSLRMTHEGNEEDKETKALALIKK 147
+ + + +A L N++S EE++++++ E+A I++ L HEG E K+ K L +
Sbjct: 57 HRNLQLNAQAMNALFNSLSQEEFDRVSNLETAYEIWNKLAKIHEGTSEYKDAKLHFLKIQ 116
Query: 148 YGAFKMEPDESIEAMFSRF*MLIAGIRVLDKCYTTVDHAKKIIRSLPEKWMPLVIAL 204
Y F M P ES+ M+ R +++ ++ L YT ++ AKK++R+LPEK+ LV L
Sbjct: 117 YETFSMLPHESVNDMYGRLNVIVNDLKGLGANYTDLEVAKKMLRALPEKYETLVTML 173
>UniRef100_Q8H851 Putative Zea mays retrotransposon Opie-2 [Oryza sativa]
Length = 2011
Score = 82.8 bits (203), Expect = 1e-14
Identities = 48/177 (27%), Positives = 89/177 (50%), Gaps = 9/177 (5%)
Query: 28 HYSAKPPVFDGEKFDYCKDRIENFFLRFDTDLWDIVVYGYTRLVDEDGVKIPREKMNGDQ 87
++ K P+F+G + K ++ +W IV G+ I +
Sbjct: 6 NHVGKAPMFNGTNYSTWKIKMSTHLKAMSFHIWSIVDVGFA---------ITGTPLTEID 56
Query: 88 KKKYKDHHRARTILLNAISYEEYEKITDRESAKSIFDSLRMTHEGNEEDKETKALALIKK 147
+ K + +A +L N++S EE++++++ E+A I++ L HE E K+ K L +
Sbjct: 57 HRNLKLNAQAMNVLFNSLSQEEFDRVSNLETAYEIWNKLAEIHESTSEYKDAKLHFLKIQ 116
Query: 148 YGAFKMEPDESIEAMFSRF*MLIAGIRVLDKCYTTVDHAKKIIRSLPEKWMPLVIAL 204
Y F M P ES+ M+ R +++ ++ L YT ++ A+K++R+LPEK+ LV L
Sbjct: 117 YETFSMLPHESVNDMYGRLNVIVNDLKGLGANYTNLEVAQKMLRALPEKYETLVTML 173
>UniRef100_Q7X7G6 OSJNBb0006N15.2 protein [Oryza sativa]
Length = 1134
Score = 82.8 bits (203), Expect = 1e-14
Identities = 44/154 (28%), Positives = 81/154 (52%), Gaps = 9/154 (5%)
Query: 29 YSAKPPVFDGEKFDYCKDRIENFFLRFDTDLWDIVVYGYTRLVDEDGVKIPREKMNGDQK 88
+S KP VFDG F + R++++ + D D+W V + Y IP +K
Sbjct: 7 FSTKPHVFDGTDFSHWCSRMQSYIMAEDYDIWRKVSHAYV---------IPEAINTAAEK 57
Query: 89 KKYKDHHRARTILLNAISYEEYEKITDRESAKSIFDSLRMTHEGNEEDKETKALALIKKY 148
++ + +AR ILL+ IS +Y+++ ++A I+ +L H+G KE + K+Y
Sbjct: 58 TAFEQNCKARNILLSGISRSDYDRVAHLQTAHEIWVALSNFHQGTNNIKELRRDLFKKEY 117
Query: 149 GAFKMEPDESIEAMFSRF*MLIAGIRVLDKCYTT 182
F+M+P E+++ SRF +++ ++ +D Y T
Sbjct: 118 IKFEMKPGEALDDYLSRFNKILSDLKYVDSSYDT 151
>UniRef100_Q8LMY8 Putative polyprotein [Oryza sativa]
Length = 1584
Score = 82.4 bits (202), Expect = 1e-14
Identities = 48/177 (27%), Positives = 89/177 (50%), Gaps = 9/177 (5%)
Query: 28 HYSAKPPVFDGEKFDYCKDRIENFFLRFDTDLWDIVVYGYTRLVDEDGVKIPREKMNGDQ 87
++ K P+F+G + K ++ +W IV G+ I +
Sbjct: 6 NHVGKAPIFNGTNYSTWKIKMSTHLKAMSFHIWSIVYVGFA---------ITGTPLTEID 56
Query: 88 KKKYKDHHRARTILLNAISYEEYEKITDRESAKSIFDSLRMTHEGNEEDKETKALALIKK 147
+ + + +A L N++S EE++++++ E+A I++ L HEG E K+ K L +
Sbjct: 57 HRNLQLNAQAMNALFNSLSQEEFDRVSNLETAYEIWNKLAEIHEGTSEYKDAKLHFLKIQ 116
Query: 148 YGAFKMEPDESIEAMFSRF*MLIAGIRVLDKCYTTVDHAKKIIRSLPEKWMPLVIAL 204
Y F M P ES+ M+ R +++ ++ L YT ++ A+K++R+LPEK+ LV L
Sbjct: 117 YETFYMLPHESVNDMYGRLNVIVNDLKGLGANYTDLEVAQKMLRALPEKYETLVTML 173
>UniRef100_Q75LG0 Putative integrase [Oryza sativa]
Length = 1507
Score = 82.0 bits (201), Expect = 2e-14
Identities = 44/152 (28%), Positives = 80/152 (51%), Gaps = 9/152 (5%)
Query: 29 YSAKPPVFDGEKFDYCKDRIENFFLRFDTDLWDIVVYGYTRLVDEDGVKIPREKMNGDQK 88
+S KP VFDG F + R++++ + D D+W V + Y IP +K
Sbjct: 7 FSTKPHVFDGTDFSHWCSRMQSYIMAEDYDIWRKVSHPYV---------IPEAINTAAEK 57
Query: 89 KKYKDHHRARTILLNAISYEEYEKITDRESAKSIFDSLRMTHEGNEEDKETKALALIKKY 148
++ + +AR ILL+ IS +Y+++ ++A I+ +L H+G KE + K+Y
Sbjct: 58 TAFEQNCKARNILLSGISRSDYDRVAHLQTAHEIWTTLSNFHQGTNNIKELRRDLFKKEY 117
Query: 149 GAFKMEPDESIEAMFSRF*MLIAGIRVLDKCY 180
F+M+P E+++ SRF +++ +R +D Y
Sbjct: 118 IKFEMKPGEALDDYLSRFNKILSDLRSVDSSY 149
>UniRef100_Q7XH50 Putative copia-type pol polyprotein [Oryza sativa]
Length = 998
Score = 81.6 bits (200), Expect = 3e-14
Identities = 44/152 (28%), Positives = 81/152 (52%), Gaps = 9/152 (5%)
Query: 29 YSAKPPVFDGEKFDYCKDRIENFFLRFDTDLWDIVVYGYTRLVDEDGVKIPREKMNGDQK 88
+S KP VFDG F + R++++ + D D+W V + Y IP K
Sbjct: 7 FSTKPHVFDGTDFSHWCSRMQSYIMAEDYDIWRKVSHPYV---------IPEVINTAAAK 57
Query: 89 KKYKDHHRARTILLNAISYEEYEKITDRESAKSIFDSLRMTHEGNEEDKETKALALIKKY 148
K++ + +AR ILL+ IS +Y+++ ++A I+++L H+G KE + K+Y
Sbjct: 58 TKFEQNCKARNILLSGISRSDYDRVAHFQTAHEIWNALSNFHQGTNNIKELRRAIFKKEY 117
Query: 149 GAFKMEPDESIEAMFSRF*MLIAGIRVLDKCY 180
F+++P E+++ SRF +++ +R +D Y
Sbjct: 118 IKFEIKPGEALDDYLSRFNKILSDLRSVDFSY 149
>UniRef100_Q947Z9 Putative retroelement [Oryza sativa]
Length = 1660
Score = 81.6 bits (200), Expect = 3e-14
Identities = 43/154 (27%), Positives = 80/154 (51%), Gaps = 9/154 (5%)
Query: 29 YSAKPPVFDGEKFDYCKDRIENFFLRFDTDLWDIVVYGYTRLVDEDGVKIPREKMNGDQK 88
+S KP VFDG F + R++++ + D D+W V + Y IP +K
Sbjct: 151 FSTKPHVFDGTDFSHWCSRMQSYIMAEDYDIWRKVSHSYV---------IPEAINTAAEK 201
Query: 89 KKYKDHHRARTILLNAISYEEYEKITDRESAKSIFDSLRMTHEGNEEDKETKALALIKKY 148
++ + ++ ILL+ IS +Y+++ ++A I+ +L H+G KE + K+Y
Sbjct: 202 TAFEQNCKSHNILLSGISRSDYDRVAHLQTAHEIWTALSNFHQGTNNIKELRRDLFKKEY 261
Query: 149 GAFKMEPDESIEAMFSRF*MLIAGIRVLDKCYTT 182
F+M+P E+++ SRF +++ +R +D Y T
Sbjct: 262 IKFEMKPGEALDDYLSRFNKILSDLRSIDSSYDT 295
>UniRef100_Q60DR2 Putative polyprotein [Oryza sativa]
Length = 1577
Score = 81.3 bits (199), Expect = 3e-14
Identities = 49/182 (26%), Positives = 89/182 (47%), Gaps = 21/182 (11%)
Query: 29 YSAKPPVFDGEKFDYCKDRIENFFLRFDTDLWDIVVYGYTRL------VDEDGVKIPREK 82
+ K P+F+G + K ++ +W IV G+ +D +++ +
Sbjct: 7 HEGKAPMFNGTNYSTWKIKMSTHLKAMSFHIWSIVDVGFAITGTPLMEIDHRNLQLNAQA 66
Query: 83 MNGDQKKKYKDHHRARTILLNAISYEEYEKITDRESAKSIFDSLRMTHEGNEEDKETKAL 142
MN L N++S EE++++++ E+A I++ L HEG E K+ K
Sbjct: 67 MNA---------------LFNSLSQEEFDRVSNLETAYEIWNKLAEIHEGTSEYKDAKLH 111
Query: 143 ALIKKYGAFKMEPDESIEAMFSRF*MLIAGIRVLDKCYTTVDHAKKIIRSLPEKWMPLVI 202
L +Y F M P ES+ M+ R +++ ++ L YT ++ A+K++R+LPEK+ LV
Sbjct: 112 FLKIQYETFSMLPHESVNDMYGRLNVIVNDLKGLGANYTDLEVAQKMLRALPEKYETLVT 171
Query: 203 AL 204
L
Sbjct: 172 ML 173
>UniRef100_Q6AUQ5 Putative polyprotein [Oryza sativa]
Length = 1398
Score = 80.1 bits (196), Expect = 7e-14
Identities = 44/152 (28%), Positives = 79/152 (51%), Gaps = 9/152 (5%)
Query: 29 YSAKPPVFDGEKFDYCKDRIENFFLRFDTDLWDIVVYGYTRLVDEDGVKIPREKMNGDQK 88
+S KP VFDG F + R++++ + D D+W V + Y IP +K
Sbjct: 7 FSTKPHVFDGTDFSHWYSRMQSYIMAEDYDIWRKVSHPYV---------IPETINTAAEK 57
Query: 89 KKYKDHHRARTILLNAISYEEYEKITDRESAKSIFDSLRMTHEGNEEDKETKALALIKKY 148
++ + +AR ILL+ IS +Y ++ ++A I+ +L H+G KE + K+Y
Sbjct: 58 TAFEQNCKARNILLSGISRLDYNRVAHLQTAHEIWTALSNFHQGTNNIKELRRDLFKKEY 117
Query: 149 GAFKMEPDESIEAMFSRF*MLIAGIRVLDKCY 180
F+M+P E+++ SRF +++ +R +D Y
Sbjct: 118 IKFEMKPREALDDYLSRFNKILSDLRSVDSSY 149
>UniRef100_Q8H7T1 Putative Zea mays retrotransposon Opie-2 [Oryza sativa]
Length = 2145
Score = 80.1 bits (196), Expect = 7e-14
Identities = 51/169 (30%), Positives = 88/169 (51%), Gaps = 8/169 (4%)
Query: 25 LKDHYSAKPPVFDGEKFDYCKDRIENFFLRFDTDLWDIVVYGYTRLVDEDGVKIPREKMN 84
+++ YSAKP VFDG F K R+E + ++W+ V YT V +D P
Sbjct: 1 MEEKYSAKPFVFDGHNFVIWKARMEAYLQSQGHNVWNKVKSPYT--VPDDADITPANMAQ 58
Query: 85 GDQKKKYKDHHRARTILLNAISYEEYEKITDRESAKSIFDSLRMTHEGNEEDKETKALAL 144
D ++RAR ++ IS E+ ++ +SA ++ +L HEGN + + +
Sbjct: 59 VDF------NYRARNAIIGGISSGEFNRVQHHKSAHDMWTALCNFHEGNNDIQLVRQNQF 112
Query: 145 IKKYGAFKMEPDESIEAMFSRF*MLIAGIRVLDKCYTTVDHAKKIIRSL 193
K+Y F+M P ESI++ F RF +I+ +R + K ++ D+A+ ++ L
Sbjct: 113 HKEYQRFEMHPGESIDSYFKRFGEIISKLRSVGKEFSDNDNARHLLNCL 161
>UniRef100_Q852C7 Putative gag-pol polyprotein [Oryza sativa]
Length = 1969
Score = 80.1 bits (196), Expect = 7e-14
Identities = 51/169 (30%), Positives = 88/169 (51%), Gaps = 8/169 (4%)
Query: 25 LKDHYSAKPPVFDGEKFDYCKDRIENFFLRFDTDLWDIVVYGYTRLVDEDGVKIPREKMN 84
+++ YSAKP VFDG F K R+E + ++W+ V YT V +D P
Sbjct: 1 MEEKYSAKPFVFDGHNFVIWKARMEAYLQSQGHNVWNKVKSPYT--VPDDADITPANMAQ 58
Query: 85 GDQKKKYKDHHRARTILLNAISYEEYEKITDRESAKSIFDSLRMTHEGNEEDKETKALAL 144
D ++RAR ++ IS E+ ++ +SA ++ +L HEGN + + +
Sbjct: 59 VDF------NYRARNAIIGGISSGEFNRVQHHKSAHDMWTALCNFHEGNNDIQLVRQNQF 112
Query: 145 IKKYGAFKMEPDESIEAMFSRF*MLIAGIRVLDKCYTTVDHAKKIIRSL 193
K+Y F+M P ESI++ F RF +I+ +R + K ++ D+A+ ++ L
Sbjct: 113 HKEYQRFEMHPGESIDSYFKRFGEIISKLRSVGKEFSDNDNARHLLNCL 161
>UniRef100_Q7XPI7 OSJNBb0004A17.2 protein [Oryza sativa]
Length = 1877
Score = 80.1 bits (196), Expect = 7e-14
Identities = 51/169 (30%), Positives = 88/169 (51%), Gaps = 8/169 (4%)
Query: 25 LKDHYSAKPPVFDGEKFDYCKDRIENFFLRFDTDLWDIVVYGYTRLVDEDGVKIPREKMN 84
+++ YSAKP VFDG F K R+E + ++W+ V YT V +D P
Sbjct: 1 MEEKYSAKPFVFDGHNFVIWKARMEAYLQSQGHNVWNKVKSPYT--VPDDADITPANMAQ 58
Query: 85 GDQKKKYKDHHRARTILLNAISYEEYEKITDRESAKSIFDSLRMTHEGNEEDKETKALAL 144
D ++RAR ++ IS E+ ++ +SA ++ +L HEGN + + +
Sbjct: 59 VDF------NYRARNAIIGGISSGEFNRVQHHKSAHDMWTALCNFHEGNNDIQLVRQNQF 112
Query: 145 IKKYGAFKMEPDESIEAMFSRF*MLIAGIRVLDKCYTTVDHAKKIIRSL 193
K+Y F+M P ESI++ F RF +I+ +R + K ++ D+A+ ++ L
Sbjct: 113 HKEYQRFEMHPGESIDSYFKRFGEIISKLRSVGKEFSDNDNARHLLNCL 161
>UniRef100_Q688I4 Putative polyprotein [Oryza sativa]
Length = 1282
Score = 80.1 bits (196), Expect = 7e-14
Identities = 43/152 (28%), Positives = 80/152 (52%), Gaps = 9/152 (5%)
Query: 29 YSAKPPVFDGEKFDYCKDRIENFFLRFDTDLWDIVVYGYTRLVDEDGVKIPREKMNGDQK 88
+S KP VFDG F + R++++ + D D+W + + Y IP +K
Sbjct: 7 FSTKPLVFDGTDFSHWCSRMQSYIMAEDYDIWRKISHPYV---------IPEAINIAAKK 57
Query: 89 KKYKDHHRARTILLNAISYEEYEKITDRESAKSIFDSLRMTHEGNEEDKETKALALIKKY 148
++ + +AR ILL+ IS +Y+++ ++A I+ +L H+G KE + K+Y
Sbjct: 58 SDFEQNCKARNILLSGISRSDYDRVAHLQTAHEIWTALSNFHQGTNNIKELRRDLFKKEY 117
Query: 149 GAFKMEPDESIEAMFSRF*MLIAGIRVLDKCY 180
F+M+P E+++ SRF +++ +R +D Y
Sbjct: 118 IKFEMKPGEALDDYLSRFNKILSDLRSVDSSY 149
>UniRef100_Q94GR9 Putative gag-pol polyprotein [Oryza sativa]
Length = 1700
Score = 80.1 bits (196), Expect = 7e-14
Identities = 47/177 (26%), Positives = 88/177 (49%), Gaps = 9/177 (5%)
Query: 28 HYSAKPPVFDGEKFDYCKDRIENFFLRFDTDLWDIVVYGYTRLVDEDGVKIPREKMNGDQ 87
++ K P+F+G + K ++ +W IV G+ I +
Sbjct: 6 NHVGKAPMFNGTNYSTWKIKMSTHLKAMSFHIWSIVDVGFA---------ITGTPLTEID 56
Query: 88 KKKYKDHHRARTILLNAISYEEYEKITDRESAKSIFDSLRMTHEGNEEDKETKALALIKK 147
+ + + +A L N++S EE++++++ E+A I++ L HEG E K+ K L +
Sbjct: 57 HRNLQLNAQAMNALFNSLSQEEFDRVSNLETAYEIWNKLAEIHEGTSEYKDAKLHFLKIQ 116
Query: 148 YGAFKMEPDESIEAMFSRF*MLIAGIRVLDKCYTTVDHAKKIIRSLPEKWMPLVIAL 204
Y F M P ES+ M+ R +++ ++ L YT ++ A+K++R+LPEK+ V L
Sbjct: 117 YETFSMLPHESVNDMYGRLNVIVNDLKGLGANYTDLEVAQKMLRALPEKYETFVTML 173
>UniRef100_Q851U4 Putative copia-type retrotransposon protein [Oryza sativa]
Length = 1183
Score = 79.7 bits (195), Expect = 1e-13
Identities = 47/177 (26%), Positives = 87/177 (48%), Gaps = 9/177 (5%)
Query: 28 HYSAKPPVFDGEKFDYCKDRIENFFLRFDTDLWDIVVYGYTRLVDEDGVKIPREKMNGDQ 87
++ K P+F+G + K ++ +W IV G+ I +
Sbjct: 6 NHVGKAPMFNGTNYSTWKIKMSTHLKAMSFHIWSIVDVGFA---------ITGTPLTEID 56
Query: 88 KKKYKDHHRARTILLNAISYEEYEKITDRESAKSIFDSLRMTHEGNEEDKETKALALIKK 147
+ + + +A L N++S EE++++++ ES I++ L HEG E K+ K L +
Sbjct: 57 HRNLQLNAQAMNALFNSLSQEEFDRVSNLESTYEIWNKLAEIHEGTSEYKDAKLHFLEIQ 116
Query: 148 YGAFKMEPDESIEAMFSRF*MLIAGIRVLDKCYTTVDHAKKIIRSLPEKWMPLVIAL 204
Y F M P ES+ M+ R +++ ++ L Y ++ A+K++R+LPEK+ LV L
Sbjct: 117 YETFSMLPHESVNDMYGRLNVIVNDLKGLGANYNVLEVAQKMLRALPEKYETLVTML 173
>UniRef100_Q8S5D7 Putative gag-pol polyprotein [Oryza sativa]
Length = 1627
Score = 79.3 bits (194), Expect = 1e-13
Identities = 50/181 (27%), Positives = 91/181 (49%), Gaps = 17/181 (9%)
Query: 28 HYSAKPPVFDGEKFDYCKDRIENFFLRFDTDLWDIVVYGY----TRLVDEDGVKIPREKM 83
++ K P+F+G + K ++ +W IV G+ T L + D + ++
Sbjct: 6 NHVGKAPMFNGTNYSTWKIKMSTHLKAMSFHIWSIVDVGFAITGTPLTEIDHCNL---QL 62
Query: 84 NGDQKKKYKDHHRARTILLNAISYEEYEKITDRESAKSIFDSLRMTHEGNEEDKETKALA 143
N +A L N+ S EE++++++ E+A I++ L HEG E K+ K
Sbjct: 63 NA----------QAMNALFNSFSQEEFDRVSNLETAYEIWNKLAEIHEGTSEYKDAKLHF 112
Query: 144 LIKKYGAFKMEPDESIEAMFSRF*MLIAGIRVLDKCYTTVDHAKKIIRSLPEKWMPLVIA 203
L +Y F M P ES+ M+ R +++ ++ L YT ++ A+K++R+LP+K+ LV
Sbjct: 113 LKIQYETFSMLPHESVNDMYGRLNVIVNDLKGLGATYTDLEVAQKMLRALPKKYETLVTM 172
Query: 204 L 204
L
Sbjct: 173 L 173
>UniRef100_Q8SAZ8 Putative polyprotein [Oryza sativa]
Length = 669
Score = 79.0 bits (193), Expect = 2e-13
Identities = 43/152 (28%), Positives = 81/152 (53%), Gaps = 9/152 (5%)
Query: 29 YSAKPPVFDGEKFDYCKDRIENFFLRFDTDLWDIVVYGYTRLVDEDGVKIPREKMNGDQK 88
+S KP VF+G F + R++++ + D D+W V + Y IP +K
Sbjct: 7 FSTKPHVFNGTDFSHWCSRMQSYIMAEDYDIWRKVSHAYV---------IPEVINTAAEK 57
Query: 89 KKYKDHHRARTILLNAISYEEYEKITDRESAKSIFDSLRMTHEGNEEDKETKALALIKKY 148
++ + +AR ILL+ IS +Y+++ E+A I+++L+ H+G KE + K+Y
Sbjct: 58 TAFEQNCKARNILLSGISRSDYDRVPHLETAHEIWNALKNFHQGTNNIKELRRDLFKKEY 117
Query: 149 GAFKMEPDESIEAMFSRF*MLIAGIRVLDKCY 180
F+M+ E+++ SRF +++ +R +D Y
Sbjct: 118 IKFEMKYREALDDYLSRFNKILSDLRSVDSSY 149
>UniRef100_Q7XW17 OSJNBb0013O03.1 protein [Oryza sativa]
Length = 832
Score = 78.6 bits (192), Expect = 2e-13
Identities = 43/152 (28%), Positives = 79/152 (51%), Gaps = 9/152 (5%)
Query: 29 YSAKPPVFDGEKFDYCKDRIENFFLRFDTDLWDIVVYGYTRLVDEDGVKIPREKMNGDQK 88
+S KP VFDG F + R++++ + D D+W V + Y IP +K
Sbjct: 7 FSTKPHVFDGTDFSHWCSRMQSYIMAEDYDIWRKVSHPYV---------IPEAINTTTEK 57
Query: 89 KKYKDHHRARTILLNAISYEEYEKITDRESAKSIFDSLRMTHEGNEEDKETKALALIKKY 148
++ + +AR ILL+ IS +Y+++ ++A I+ +L H+ KE + K+Y
Sbjct: 58 TAFEQNCKARNILLSGISRSDYDRVAHLQTAHEIWTTLSNFHQETNNIKELRRDLFKKEY 117
Query: 149 GAFKMEPDESIEAMFSRF*MLIAGIRVLDKCY 180
F+M+P E+++ SRF +++ +R +D Y
Sbjct: 118 IKFEMKPGEALDDYLSRFNKILSDLRSVDSSY 149
>UniRef100_Q9SKW9 F5J5.1 [Arabidopsis thaliana]
Length = 1463
Score = 78.6 bits (192), Expect = 2e-13
Identities = 54/184 (29%), Positives = 89/184 (48%), Gaps = 4/184 (2%)
Query: 30 SAKPPVFDGEKFDYCKDRIENFFLRFDTDLWDIVVYGYTRLVD--EDGVKIPREKMN--G 85
+ K + D +++ Y K R+ D W V G+ D EDG KI + K N
Sbjct: 10 TCKVLLLDTKRYGYWKVRMTQIIRGQGEDAWTAVEEGWEPPFDLTEDGFKITKPKANWTA 69
Query: 86 DQKKKYKDHHRARTILLNAISYEEYEKITDRESAKSIFDSLRMTHEGNEEDKETKALALI 145
++K + K + RA ++N I +E++ I +SAK +D+L+ +HEG K T+ +
Sbjct: 70 EEKLQSKFNARAMNAIVNGIDEDEFKLIQGCKSAKQAWDTLQKSHEGTSSVKRTRLDHIA 129
Query: 146 KKYGAFKMEPDESIEAMFSRF*MLIAGIRVLDKCYTTVDHAKKIIRSLPEKWMPLVIALK 205
++ KMEP E+I S+ L VL K Y KK++R LP K+ ++
Sbjct: 130 TQFEYLKMEPYETIVKFSSKISALANEAEVLGKTYKDQKLVKKLLRCLPPKFPAHKAVMR 189
Query: 206 LSKN 209
++ N
Sbjct: 190 VAGN 193
>UniRef100_Q7XW16 OSJNBb0013O03.2 protein [Oryza sativa]
Length = 1162
Score = 78.2 bits (191), Expect = 3e-13
Identities = 43/154 (27%), Positives = 80/154 (51%), Gaps = 9/154 (5%)
Query: 29 YSAKPPVFDGEKFDYCKDRIENFFLRFDTDLWDIVVYGYTRLVDEDGVKIPREKMNGDQK 88
+S KP VFDG F + R++++ + D D+W V + Y IP +K
Sbjct: 7 FSTKPHVFDGTDFYHWCSRMQSYIMAEDYDIWRKVSHPYV---------IPEAINTAAEK 57
Query: 89 KKYKDHHRARTILLNAISYEEYEKITDRESAKSIFDSLRMTHEGNEEDKETKALALIKKY 148
++ + +AR ILL+ IS +Y+++ +A I+++L H+G K+ + +Y
Sbjct: 58 IAFEQNCKARNILLSGISRSDYDRVAHFRTAHEIWNALSNFHQGTNNIKKLRRDIFKNEY 117
Query: 149 GAFKMEPDESIEAMFSRF*MLIAGIRVLDKCYTT 182
F+M+P E+++ SRF +++ +R +D Y T
Sbjct: 118 IKFEMKPGEAMDGYLSRFNKILSDLRSVDSSYDT 151
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.343 0.150 0.475
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 476,655,528
Number of Sequences: 2790947
Number of extensions: 18339291
Number of successful extensions: 89663
Number of sequences better than 10.0: 188
Number of HSP's better than 10.0 without gapping: 146
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 89401
Number of HSP's gapped (non-prelim): 211
length of query: 323
length of database: 848,049,833
effective HSP length: 127
effective length of query: 196
effective length of database: 493,599,564
effective search space: 96745514544
effective search space used: 96745514544
T: 11
A: 40
X1: 15 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 38 (21.5 bits)
S2: 75 (33.5 bits)
Lotus: description of TM0247.1