BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0243.9
(310 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q8TRM0 Predicted protein [Methanosarcina acetivorans] 39 0.23
UniRef100_Q96X88 Hypothetical protein ST2622 [Sulfolobus tokodaii] 37 0.67
UniRef100_Q693B6 Endo-chitinase [Microbulbifer hydrolyticus] 36 1.1
UniRef100_UPI0000318663 UPI0000318663 UniRef100 entry 35 2.6
UniRef100_Q8S8P5 Probable WRKY transcription factor 33 [Arabidop... 34 4.4
UniRef100_UPI00003041F0 UPI00003041F0 UniRef100 entry 34 5.7
UniRef100_UPI000042C88B UPI000042C88B UniRef100 entry 33 7.4
UniRef100_Q86NU8 AT28824p [Drosophila melanogaster] 33 7.4
UniRef100_O94512 Oxysterol binding protein (Predicted); involved... 33 7.4
UniRef100_UPI00004301E7 UPI00004301E7 UniRef100 entry 33 9.7
UniRef100_UPI0000346BD9 UPI0000346BD9 UniRef100 entry 33 9.7
UniRef100_UPI00002E987D UPI00002E987D UniRef100 entry 33 9.7
UniRef100_Q9WNB7 Envelope glycoprotein [Caprine arthritis enceph... 33 9.7
UniRef100_Q9WNB4 Envelope glycoprotein [Caprine arthritis enceph... 33 9.7
UniRef100_Q90E28 Envelope glycoprotein [Caprine arthritis enceph... 33 9.7
UniRef100_Q90E11 Envelope glycoprotein [Caprine arthritis enceph... 33 9.7
UniRef100_Q90E10 Envelope glycoprotein [Caprine arthritis enceph... 33 9.7
UniRef100_Q90E09 Envelope glycoprotein [Caprine arthritis enceph... 33 9.7
UniRef100_Q7XIW8 Hypothetical protein OJ1409_C08.6 [Oryza sativa] 33 9.7
UniRef100_P31627 Env polyprotein precursor (Coat polyprotein) [C... 33 9.7
>UniRef100_Q8TRM0 Predicted protein [Methanosarcina acetivorans]
Length = 1381
Score = 38.5 bits (88), Expect = 0.23
Identities = 29/103 (28%), Positives = 43/103 (41%), Gaps = 14/103 (13%)
Query: 155 IREKGVLEGAFQTLHSGYFRLFPFSFFSLPLSPPLTSTISSSTGTISSSSTTKKKTSRGV 214
+ EKG+ GAF ++ SG P + F P S + G IS+ T
Sbjct: 943 LEEKGLSTGAFDSVTSG-----PMTLFDNPAMEKAASALGQDMGIISTIKVT-------- 989
Query: 215 GRSEELQIWCESKGRVPDLVRQWLY-GSDPALNGEEQWWRNLG 256
G+ E W E+ + D +LY D L GE +W ++G
Sbjct: 990 GQPESKYSWTENLTLIVDQKPNYLYHDPDFDLRGEYEWADSMG 1032
>UniRef100_Q96X88 Hypothetical protein ST2622 [Sulfolobus tokodaii]
Length = 702
Score = 37.0 bits (84), Expect = 0.67
Identities = 19/60 (31%), Positives = 33/60 (54%)
Query: 172 YFRLFPFSFFSLPLSPPLTSTISSSTGTISSSSTTKKKTSRGVGRSEELQIWCESKGRVP 231
Y +++ SF +L +PP++S ++ T +SSSTT TS + QI+ ++ VP
Sbjct: 613 YNQIYAISFNNLISTPPISSNTTTIPTTTTSSSTTFTYTSTSISSKTTTQIYSSTESAVP 672
>UniRef100_Q693B6 Endo-chitinase [Microbulbifer hydrolyticus]
Length = 590
Score = 36.2 bits (82), Expect = 1.1
Identities = 26/85 (30%), Positives = 37/85 (42%), Gaps = 13/85 (15%)
Query: 190 TSTISSSTGTISSSSTTKKKTSRGVGRSEELQIW----------CESKGRVPDLVRQWLY 239
+S+ SSS+ + SSSS++ +S G L +W V + W
Sbjct: 107 SSSSSSSSSSSSSSSSSSGGSSSGSTSCNNLPVWDATTVYVGGNAVQHSSVKYTAKWWTQ 166
Query: 240 GSDPALNGEEQWWRNLGVSGSVSGS 264
G +P+ GE WRN GS SGS
Sbjct: 167 GDNPSQGGEYGVWRN---DGSCSGS 188
>UniRef100_UPI0000318663 UPI0000318663 UniRef100 entry
Length = 427
Score = 35.0 bits (79), Expect = 2.6
Identities = 29/84 (34%), Positives = 37/84 (43%), Gaps = 5/84 (5%)
Query: 207 KKKTSRGVGRSEELQIWCESKGRVPDLVRQWLYGSDPALNGEEQWWRNLGVSGSVSGSLL 266
+K +R R EE Q+ +G P R+ G D AL+G E R GV G V L
Sbjct: 157 RKNEARPGRRGEERQV---HRGAGPARARRQRDGRDAALHGTETGER--GVKGGVQPRSL 211
Query: 267 HLLHRLCFSLSESGAWLRKEGCDG 290
+ R S S G W +EG G
Sbjct: 212 FVCSRTLKSQSCCGRWRPEEGSSG 235
>UniRef100_Q8S8P5 Probable WRKY transcription factor 33 [Arabidopsis thaliana]
Length = 512
Score = 34.3 bits (77), Expect = 4.4
Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 10/103 (9%)
Query: 157 EKGVLEGAFQTLHSGYFRLFPFSFF--SLPLSPPLTSTISSSTGTISSSSTTKKKTSRGV 214
+KG+ EG ++ F LF FSF S +S P T+T +++T T ++SS + + +
Sbjct: 91 QKGINEG--DKSNNNNFNLFDFSFHTQSSGVSAPTTTTTTTTTTTTTNSSIFQSQEQQKK 148
Query: 215 GRSEELQIWCESKGRVPDLVRQWLYGSDPALNGEEQW-WRNLG 256
+SE+ W +++ R + + Y GE+ + WR G
Sbjct: 149 NQSEQ---WSQTETRPNN--QAVSYNGREQRKGEDGYNWRKYG 186
>UniRef100_UPI00003041F0 UPI00003041F0 UniRef100 entry
Length = 274
Score = 33.9 bits (76), Expect = 5.7
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Query: 143 GRIPPARRPGCFIREKGVLEGAFQTLHSGYFRLFPFSFFSLPLSPPLTSTISSSTGTISS 202
G IP +PGC + G +E A SG + + ++ L +S + +T S+S+GT +S
Sbjct: 61 GEIPTVTQPGCNSEDLGSIELAL----SGGVQPYDIKWYKLSVS-QVNATSSTSSGTGTS 115
Query: 203 SSTTKKKT 210
+ST+ T
Sbjct: 116 TSTSSSTT 123
>UniRef100_UPI000042C88B UPI000042C88B UniRef100 entry
Length = 125
Score = 33.5 bits (75), Expect = 7.4
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 10/71 (14%)
Query: 45 TKIWVVLMLLERLKFIVALCSSL-------DFIFKPLATHTNWKFFDCLSI---FFTGDV 94
T + ++L+LL + C L + IF+PL TN FFD + + FFTGD
Sbjct: 17 TVLLLLLLLLLWESGVCGFCRCLLRYDGVSNTIFRPLIGVTNSLFFDLVGVSIMFFTGDC 76
Query: 95 QGKVEEADSRA 105
G + AD A
Sbjct: 77 GGGIANADGDA 87
>UniRef100_Q86NU8 AT28824p [Drosophila melanogaster]
Length = 642
Score = 33.5 bits (75), Expect = 7.4
Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 12/112 (10%)
Query: 203 SSTTKKKTSRGVGRSEELQIWCESKGRVPDLVRQWLYGSDPALNGEEQWWRNLGVSGSVS 262
SS K +R G+ + C+S G++ ++ DP L+GE + W S +
Sbjct: 1 SSKFNIKLNRSFGQKTSATM-CQSGGQMLCEIKNMALSGDPELDGEIRKWIRWDKCASTA 59
Query: 263 GSLLH---------LLHRLCFSLSESGAWLRKEGCDGDGFESRLELFVVFVA 305
++ L RLC +S A LR C GF+S EL V+ A
Sbjct: 60 CQIMDAVRAKDWDTLRKRLCTRISFGTAGLR--ACMRAGFDSMNELVVIQTA 109
>UniRef100_O94512 Oxysterol binding protein (Predicted); involved in ergosterol
biosynthesis (Predicted); similar to S. cerevisiae
YHR001W and YKR003W and YOR237W and YPL145C; similar to
S. pombe SPBC354.07 and SPBC1271.12 and SPCC23B6.01
[Schizosaccharomyces pombe]
Length = 516
Score = 33.5 bits (75), Expect = 7.4
Identities = 51/192 (26%), Positives = 83/192 (42%), Gaps = 16/192 (8%)
Query: 37 EYYQKLDGTKIWVVLMLLER---LKFIVALCSSLDF-IFKPLATHTNWKFFDCLSIFFTG 92
E YQK +G K +VL +L++ +K I +L SL + +P+ W + D F
Sbjct: 31 EGYQKEEG-KFKLVLSILKQCIGVKDIASLRFSLPAQLLEPVGNLEYWNYVDRPDYFAV- 88
Query: 93 DVQGKVEEADSRARRSGRSSRWFASHQFHIAVGDAIKDVMVLEGERRRGGGRI--PPARR 150
+ ++D R RW+ + G +K + GE R + P R
Sbjct: 89 -----MGDSDDELERMLGVLRWWFTKDLRFVRGRVVKPYNSVLGEFFRCKWVVTDPTVRE 143
Query: 151 PGCFIREKGVLEGAFQTLHSGYFRLFPFSFFSLPLSPPLTSTIS-SSTGTISSSSTTKKK 209
+ L ++T +S + FP P + TS+ S +ST T SS+ T+KKK
Sbjct: 144 DHTLDPDSSQLP-TYKTEYSETTK-FPLGKSYRPKASRTTSSQSVASTMTKSSTKTSKKK 201
Query: 210 TSRGVGRSEELQ 221
+S+ +SE Q
Sbjct: 202 SSKKNSKSESNQ 213
>UniRef100_UPI00004301E7 UPI00004301E7 UniRef100 entry
Length = 2076
Score = 33.1 bits (74), Expect = 9.7
Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 16/91 (17%)
Query: 122 IAVGDAIKDVMVLEGERRRGGGRIPPARRPGCFIREKGVLEGAFQTLHSGYFRLFP--FS 179
I+ D DV LEG GRIP P ++ G LEG +G + L +
Sbjct: 728 ISYRDPNADVRYLEG------GRIPA---PVGWLIRMGFLEG-----EAGRYELSRAYVN 773
Query: 180 FFSLPLSPPLTSTISSSTGTISSSSTTKKKT 210
F + L P +S+ SS++GT+S SST K T
Sbjct: 774 FLTALLPSPSSSSSSSTSGTVSISSTLGKPT 804
>UniRef100_UPI0000346BD9 UPI0000346BD9 UniRef100 entry
Length = 110
Score = 33.1 bits (74), Expect = 9.7
Identities = 14/26 (53%), Positives = 17/26 (64%)
Query: 23 VVSGVWWVGFGTVKEYYQKLDGTKIW 48
V+SG+ W G G VKE + LDG K W
Sbjct: 5 VISGIAWSGRGKVKEVHVSLDGGKNW 30
>UniRef100_UPI00002E987D UPI00002E987D UniRef100 entry
Length = 163
Score = 33.1 bits (74), Expect = 9.7
Identities = 25/90 (27%), Positives = 40/90 (43%), Gaps = 4/90 (4%)
Query: 148 ARRPGCFIREKGVLEGAFQTLHSGYFRLFPFSFFSLPLSPPLTSTISSSTGTISSSSTT- 206
AR C++ + G T+++ YF LF F SL LS + S+++TT
Sbjct: 62 ARGHVCYVSIANSILGL--TMYASYFLLFFMLFQSLYLSKKRAKAKADEAKPSSTTTTTT 119
Query: 207 -KKKTSRGVGRSEELQIWCESKGRVPDLVR 235
KKKT+ S+ + W + +VR
Sbjct: 120 KKKKTTEAAAASDLFEGWAGKNAEIEMVVR 149
>UniRef100_Q9WNB7 Envelope glycoprotein [Caprine arthritis encephalitis virus]
Length = 556
Score = 33.1 bits (74), Expect = 9.7
Identities = 20/66 (30%), Positives = 37/66 (55%), Gaps = 8/66 (12%)
Query: 229 RVPDLVRQWLYGSDPA--LNGEEQWWRNL-----GVSGSVSGSLLHLLHRLCFSLSESGA 281
++P VR W+ ++ + +NG +W+N G++G++ G L + H L F+LS++G
Sbjct: 245 KLPLTVRVWVKLANVSAWVNGTPPYWQNRINGSKGINGTLWGQLSGM-HHLGFNLSQNGK 303
Query: 282 WLRKEG 287
W G
Sbjct: 304 WCNYTG 309
>UniRef100_Q9WNB4 Envelope glycoprotein [Caprine arthritis encephalitis virus]
Length = 557
Score = 33.1 bits (74), Expect = 9.7
Identities = 20/66 (30%), Positives = 37/66 (55%), Gaps = 8/66 (12%)
Query: 229 RVPDLVRQWLYGSDPA--LNGEEQWWRNL-----GVSGSVSGSLLHLLHRLCFSLSESGA 281
++P VR W+ ++ + +NG +W+N G++G++ G L + H L F+LS++G
Sbjct: 245 KLPLTVRVWVKLANVSAWVNGTPPYWQNRINGSKGINGTLWGQLSGM-HHLGFNLSQNGK 303
Query: 282 WLRKEG 287
W G
Sbjct: 304 WCNYTG 309
>UniRef100_Q90E28 Envelope glycoprotein [Caprine arthritis encephalitis virus]
Length = 305
Score = 33.1 bits (74), Expect = 9.7
Identities = 21/66 (31%), Positives = 34/66 (50%), Gaps = 8/66 (12%)
Query: 229 RVPDLVRQW--LYGSDPALNGEEQWWRNL-----GVSGSVSGSLLHLLHRLCFSLSESGA 281
++P VR W L P +NG +W + G++G++ G L + H L F+LS++G
Sbjct: 15 KLPLTVRVWVKLANVSPWVNGTPPYWPDRINGSKGINGTLWGQLSGM-HHLGFNLSQNGK 73
Query: 282 WLRKEG 287
W G
Sbjct: 74 WCHYTG 79
>UniRef100_Q90E11 Envelope glycoprotein [Caprine arthritis encephalitis virus]
Length = 305
Score = 33.1 bits (74), Expect = 9.7
Identities = 21/66 (31%), Positives = 34/66 (50%), Gaps = 8/66 (12%)
Query: 229 RVPDLVRQW--LYGSDPALNGEEQWWRNL-----GVSGSVSGSLLHLLHRLCFSLSESGA 281
++P VR W L +NG +W+N G++G++ G L + H L F+LS++G
Sbjct: 15 KLPLTVRVWAKLANVSTWVNGTPPYWQNRINGSKGINGTLWGQLSGM-HHLGFNLSQNGK 73
Query: 282 WLRKEG 287
W G
Sbjct: 74 WCNYTG 79
>UniRef100_Q90E10 Envelope glycoprotein [Caprine arthritis encephalitis virus]
Length = 305
Score = 33.1 bits (74), Expect = 9.7
Identities = 21/66 (31%), Positives = 34/66 (50%), Gaps = 8/66 (12%)
Query: 229 RVPDLVRQW--LYGSDPALNGEEQWWRNL-----GVSGSVSGSLLHLLHRLCFSLSESGA 281
++P VR W L +NG +W+N G++G++ G L + H L F+LS++G
Sbjct: 15 KLPLTVRVWAKLANVSTWVNGTPPYWQNRINGSKGINGTLWGQLSGM-HHLGFNLSQNGK 73
Query: 282 WLRKEG 287
W G
Sbjct: 74 WCNYTG 79
>UniRef100_Q90E09 Envelope glycoprotein [Caprine arthritis encephalitis virus]
Length = 305
Score = 33.1 bits (74), Expect = 9.7
Identities = 21/66 (31%), Positives = 34/66 (50%), Gaps = 8/66 (12%)
Query: 229 RVPDLVRQW--LYGSDPALNGEEQWWRNL-----GVSGSVSGSLLHLLHRLCFSLSESGA 281
++P VR W L +NG +W+N G++G++ G L + H L F+LS++G
Sbjct: 15 KLPLTVRVWAKLANVSTWVNGTPPYWQNRINGSKGINGTLWGQLSGM-HHLGFNLSQNGK 73
Query: 282 WLRKEG 287
W G
Sbjct: 74 WCNYTG 79
>UniRef100_Q7XIW8 Hypothetical protein OJ1409_C08.6 [Oryza sativa]
Length = 307
Score = 33.1 bits (74), Expect = 9.7
Identities = 38/125 (30%), Positives = 51/125 (40%), Gaps = 22/125 (17%)
Query: 104 RARRSGRSSRWFASHQFH----IAVGDAIKDVMVLEGERRRGGG--RIPPARRPGCFIRE 157
R RR + A+ H + + DA + G R RG G RI P RRP R
Sbjct: 25 RRRRERKRRTPSAATSLHHCRLLTLFDAAGSSGAVRGSRERGRGERRIKPRRRPSLLHRH 84
Query: 158 KGVLEGAFQTLHSGYFRLFPFSFFS---------LPLSPP-LTSTISSSTGTISSSSTTK 207
+ A Q +G R FPF FF +P +PP T + S G + +S T
Sbjct: 85 Q-----ARQRPPAG-ARSFPFPFFHPGGTITRPFVPDAPPSATGLVLSRDGPLDASLDTS 138
Query: 208 KKTSR 212
+SR
Sbjct: 139 PTSSR 143
>UniRef100_P31627 Env polyprotein precursor (Coat polyprotein) [Contains: Surface
protein; Transmembrane protein] [Caprine arthritis
encephalitis virus]
Length = 942
Score = 33.1 bits (74), Expect = 9.7
Identities = 20/66 (30%), Positives = 37/66 (55%), Gaps = 8/66 (12%)
Query: 229 RVPDLVRQWLYGSDPA--LNGEEQWWRNL-----GVSGSVSGSLLHLLHRLCFSLSESGA 281
++P VR W+ ++ + +NG +W+N G++G++ G L + H L F+LS++G
Sbjct: 318 KLPLTVRVWVKLANVSTWVNGTPPYWQNRINGSKGINGTLWGQLSGM-HHLGFNLSQTGK 376
Query: 282 WLRKEG 287
W G
Sbjct: 377 WCNYTG 382
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.323 0.139 0.450
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 559,288,472
Number of Sequences: 2790947
Number of extensions: 23283424
Number of successful extensions: 75766
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 75754
Number of HSP's gapped (non-prelim): 26
length of query: 310
length of database: 848,049,833
effective HSP length: 127
effective length of query: 183
effective length of database: 493,599,564
effective search space: 90328720212
effective search space used: 90328720212
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 74 (33.1 bits)
Lotus: description of TM0243.9