BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0239.1
         (285 letters)

Database: uniref100 
           2,790,947 sequences; 848,049,833 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

UniRef100_Q93KC9 AorR protein [Eubacterium acidaminophilum]            36  1.0
UniRef100_UPI00002FDBF5 UPI00002FDBF5 UniRef100 entry                  34  5.0
UniRef100_UPI00002C1141 UPI00002C1141 UniRef100 entry                  33  8.5

>UniRef100_Q93KC9 AorR protein [Eubacterium acidaminophilum]
          Length = 518

 Score = 36.2 bits (82), Expect = 1.0
 Identities = 25/81 (30%), Positives = 41/81 (49%), Gaps = 2/81 (2%)

Query: 123 LRLTGLTEGLSPETQRKVVPSSFRGKEFNGLSVSPKSRRFAQKVQPMVEVHSVFPLVVGV 182
           + LTG TEG+ P T   VV ++F  +     S S K R+  +++     V++ F  ++G 
Sbjct: 155 INLTGYTEGVHPHTLGMVVAAAFSIEHIITESTSRKRRKMHERISECRAVYN-FEKIIGE 213

Query: 183 DRKKLPKAA-AAAVGGDETTI 202
           D K L     A  + G ++TI
Sbjct: 214 DPKFLDTIEYAKKISGSKSTI 234


>UniRef100_UPI00002FDBF5 UPI00002FDBF5 UniRef100 entry
          Length = 232

 Score = 33.9 bits (76), Expect = 5.0
 Identities = 43/173 (24%), Positives = 69/173 (39%), Gaps = 25/173 (14%)

Query: 40  STIITESAQPVGFGHTDSRHNVEDTLLVFFVKAQSFDRPK------TPNVCMMQYARFLL 93
           ST+I + A P G     S        L  F+ AQ+ D         T N  + Q     +
Sbjct: 31  STVIIKHANPCGVSSNSSA-------LRSFINAQASDPVSAFGGIVTCNFKINQKVALEI 83

Query: 94  SFGFVAKRLRYSYRKSSFRNLSAKCRQRKLRLTGLTEGLSPETQRKVVPSSFRGKEFNGL 153
           +  F    L   + K++F+ L  K   R + ++ +      +T  KV  +SF  +E + +
Sbjct: 84  NKTFFEVILAKGFDKTAFKILKKKKNMRIIDISKVN--YKSDTDTKVFNNSFLLQESDNI 141

Query: 154 SVSPKSRRFAQKVQP----MVEVHSVFPLVVGVDRKKLPKAAAAAVGGDETTI 202
               K  RF  K++P    M EV   F +       K  K+ A  +  D +TI
Sbjct: 142 VFGKKKLRFVTKIKPSKKEMKEVEFAFRVC------KYVKSNAIVIVKDNSTI 188


>UniRef100_UPI00002C1141 UPI00002C1141 UniRef100 entry
          Length = 249

 Score = 33.1 bits (74), Expect = 8.5
 Identities = 21/71 (29%), Positives = 37/71 (51%), Gaps = 11/71 (15%)

Query: 1   MAIAESIQSLG--LNIRTHACLSDYRRIDPIHRIEYTDPRVSTIITESAQPVGFGHTDSR 58
           +A+A+SIQ  G  +N+ +  CL  + + D  +R    DP +  ++ E+       H DS 
Sbjct: 150 LAVAKSIQEEGFKVNVVSMPCLDKFYQQDKTYRDSVVDPMIPKLVVEAL------HPDSW 203

Query: 59  H---NVEDTLL 66
           H   N+ DT++
Sbjct: 204 HGLLNLADTVI 214


  Database: uniref100
    Posted date:  Jan 5, 2005  1:24 AM
  Number of letters in database: 848,049,833
  Number of sequences in database:  2,790,947
  
Lambda     K      H
   0.322    0.137    0.414 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 460,838,881
Number of Sequences: 2790947
Number of extensions: 18395490
Number of successful extensions: 33927
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 33927
Number of HSP's gapped (non-prelim): 3
length of query: 285
length of database: 848,049,833
effective HSP length: 126
effective length of query: 159
effective length of database: 496,390,511
effective search space: 78926091249
effective search space used: 78926091249
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 74 (33.1 bits)