BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0223.17
(88 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q7XQJ6 OSJNBa0017B10.12 protein [Oryza sativa] 70 1e-11
UniRef100_Q7XNH9 OSJNBb0032D24.14 protein [Oryza sativa] 68 5e-11
UniRef100_Q7XES0 Hypothetical protein [Oryza sativa] 65 3e-10
UniRef100_Q7X8Y7 OSJNBa0085H03.2 protein [Oryza sativa] 62 3e-09
UniRef100_Q75I19 Hypothetical protein OSJNBb0031F05.8 [Oryza sat... 62 3e-09
UniRef100_Q5W653 Hypothetical protein OSJNBb0052F16.9 [Oryza sat... 60 1e-08
UniRef100_Q84SF3 P0020E09.11 protein [Oryza sativa] 58 5e-08
UniRef100_Q8GVY1 Ribosomal protein-like [Oryza sativa] 58 5e-08
UniRef100_Q8SB40 Putative ribosomal protein [Oryza sativa] 57 1e-07
UniRef100_Q9ST09 ORF-c protein [Brassica campestris] 56 2e-07
UniRef100_Q8RUP5 Simiar to ribosomal protein [Oryza sativa] 55 3e-07
UniRef100_Q9C845 Hypothetical protein F8D11.12 [Arabidopsis thal... 55 4e-07
UniRef100_Q84QX6 Hypothetical protein OSJNBa0093I13.9 [Oryza sat... 55 4e-07
UniRef100_Q94I59 Hypothetical protein OSJNBa0084C09.13 [Oryza sa... 53 2e-06
UniRef100_Q8RUR0 OSJNBa0026J14.30 protein [Oryza sativa] 52 5e-06
UniRef100_Q6K1V9 Ribosomal protein-like [Oryza sativa] 52 5e-06
UniRef100_Q6AU78 Hypothetical protein OSJNBa0014C03.5 [Oryza sat... 52 5e-06
UniRef100_Q5VR44 Ribosomal protein-like [Oryza sativa] 52 5e-06
UniRef100_Q9LIK4 Gb|AAD28316.1 [Arabidopsis thaliana] 51 8e-06
UniRef100_Q8H956 B protein [Oryza sativa] 50 2e-05
>UniRef100_Q7XQJ6 OSJNBa0017B10.12 protein [Oryza sativa]
Length = 454
Score = 70.1 bits (170), Expect = 1e-11
Identities = 35/77 (45%), Positives = 48/77 (61%), Gaps = 2/77 (2%)
Query: 6 QILYACIILHNMIVEDEREGYNG--NFVYDQVDNDIITAEVSNGPIPSFATFLERRGHMS 63
+I+YACIILHNMIVEDER+ Y G +F Y+Q + + GPI F LE +
Sbjct: 368 EIMYACIILHNMIVEDERDSYEGRADFNYEQGSSPVPLNGYGQGPIHGFDRVLEIGVAIR 427
Query: 64 QREIHRQLQADLVEHIW 80
+++H +L+ DL EHIW
Sbjct: 428 NKDMHHRLKNDLTEHIW 444
>UniRef100_Q7XNH9 OSJNBb0032D24.14 protein [Oryza sativa]
Length = 450
Score = 68.2 bits (165), Expect = 5e-11
Identities = 34/77 (44%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Query: 7 ILYACIILHNMIVEDEREGYN--GNFVYDQVDNDIITAEVSNGPIPSFATFLERRGHMSQ 64
I+YACIILHNMIVEDER Y+ + Y+Q + +GPI F LE+ +
Sbjct: 367 IMYACIILHNMIVEDERGSYDIPDDNTYEQGQYYPQMTGLDHGPIYGFQEVLEQNKAIHD 426
Query: 65 REIHRQLQADLVEHIWE 81
R+ HR+L+ DL+EH+W+
Sbjct: 427 RQTHRRLKGDLIEHVWQ 443
>UniRef100_Q7XES0 Hypothetical protein [Oryza sativa]
Length = 296
Score = 65.5 bits (158), Expect = 3e-10
Identities = 32/77 (41%), Positives = 52/77 (66%), Gaps = 3/77 (3%)
Query: 7 ILYACIILHNMIVEDEREGYN--GNFVYDQVDNDIITAEVSNGPIPSFATFLERRGHMSQ 64
I+YAC+ILHNMIVE+ER Y+ + Y+Q + +T + +GP+ F+ LE+ +
Sbjct: 212 IMYACVILHNMIVENERGIYDIPDDNTYEQGHSPHLTG-LDHGPVHGFSEVLEKDMEIRD 270
Query: 65 REIHRQLQADLVEHIWE 81
++ HR+L+ DL+EHIW+
Sbjct: 271 QQAHRRLKEDLIEHIWQ 287
>UniRef100_Q7X8Y7 OSJNBa0085H03.2 protein [Oryza sativa]
Length = 440
Score = 62.4 bits (150), Expect = 3e-09
Identities = 31/81 (38%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 7 ILYACIILHNMIVEDEREGYNGNFVYDQVDNDIITAE-VSNGPIPSFATFLERRGHMSQR 65
I+ AC+I+HNMI+++ER+ N +F YDQ D++++ E P FL+ + R
Sbjct: 361 IMTACVIMHNMIIDNERDE-NVDFDYDQEDSEVLRKEEYQRRNKPVLEKFLKIHKEIEDR 419
Query: 66 EIHRQLQADLVEHIWELSESR 86
+H QL+ DL+EH+W L +R
Sbjct: 420 RVHEQLRDDLMEHLWALHGAR 440
>UniRef100_Q75I19 Hypothetical protein OSJNBb0031F05.8 [Oryza sativa]
Length = 235
Score = 62.0 bits (149), Expect = 3e-09
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 6 QILYACIILHNMIVEDEREGYNGNFVYDQVDNDIITAEVSNGPIPSFATFLERRGHMSQR 65
+I+ ACIILHNMIVEDE++ ++ YD + PI F++ ++ R
Sbjct: 158 EIMIACIILHNMIVEDEKDDEGLDYNYDDEGERVTPLHT---PIAELQDFIQNHHNIRNR 214
Query: 66 EIHRQLQADLVEHIWE 81
+ H QLQ DLV+H+W+
Sbjct: 215 QTHSQLQEDLVDHLWQ 230
>UniRef100_Q5W653 Hypothetical protein OSJNBb0052F16.9 [Oryza sativa]
Length = 444
Score = 60.5 bits (145), Expect = 1e-08
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 8 LYACIILHNMIVEDEREGYNGNFVYDQVDND--IITAEVSNGPIPSFATFLERRGHMSQR 65
+ AC+ILHNMIVEDE E + +++ ++ EV++G P F L R+ + R
Sbjct: 361 MLACVILHNMIVEDEGEDAICDLDLNRIPRTSIVLPPEVTSGGNPCFRDVLSRKAAIRAR 420
Query: 66 EIHRQLQADLVEHIW 80
+H QL+ DL+EHIW
Sbjct: 421 SMHTQLKTDLIEHIW 435
>UniRef100_Q84SF3 P0020E09.11 protein [Oryza sativa]
Length = 282
Score = 58.2 bits (139), Expect = 5e-08
Identities = 30/77 (38%), Positives = 45/77 (57%), Gaps = 2/77 (2%)
Query: 6 QILYACIILHNMIVEDEREGYNGNFVYDQVDND--IITAEVSNGPIPSFATFLERRGHMS 63
+I+ AC+IL NMIVEDERE + +++ ++ EV++G P F L R+ +
Sbjct: 165 KIMLACVILPNMIVEDEREDAICDIDLNRIPRTSIVLPPEVTSGDNPCFTDVLRRKSAIR 224
Query: 64 QREIHRQLQADLVEHIW 80
+H QL DL+EHIW
Sbjct: 225 ACSVHTQLITDLIEHIW 241
>UniRef100_Q8GVY1 Ribosomal protein-like [Oryza sativa]
Length = 428
Score = 58.2 bits (139), Expect = 5e-08
Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 6 QILYACIILHNMIVEDEREGYNGNFVYDQVDND--IITAEVSNGPIPSFATFLERRGHMS 63
+I+ ACIILHNM +EDE++ + F D++ +I ++++ P SF L R +
Sbjct: 343 KIMQACIILHNMTIEDEKDMASACFDPDEISGTLAVILSDINTVPADSFTEVLHRNASVC 402
Query: 64 QREIHRQLQADLVEHIWE 81
H +L+ DL+EHIW+
Sbjct: 403 APPKHTRLRRDLMEHIWQ 420
>UniRef100_Q8SB40 Putative ribosomal protein [Oryza sativa]
Length = 915
Score = 57.0 bits (136), Expect = 1e-07
Identities = 32/83 (38%), Positives = 44/83 (52%), Gaps = 8/83 (9%)
Query: 5 MQILYACIILHNMIVEDEREGYNGNFVYDQVDNDIIT------AEVSNGPIPSFATFLER 58
+ I+ AC+ILHNMIVEDE++ D +N T + ++ P P F L R
Sbjct: 828 VNIMQACVILHNMIVEDEKDLVK--IPLDLNENPSATIVLPPEVQTNDNPNPCFVDVLNR 885
Query: 59 RGHMSQREIHRQLQADLVEHIWE 81
+ HRQL+ DLVEHIW+
Sbjct: 886 NSAIRAASTHRQLKNDLVEHIWQ 908
>UniRef100_Q9ST09 ORF-c protein [Brassica campestris]
Length = 190
Score = 55.8 bits (133), Expect = 2e-07
Identities = 33/79 (41%), Positives = 48/79 (59%), Gaps = 5/79 (6%)
Query: 7 ILYACIILHNMIVEDEREGYNG-NFVYDQVDNDIITAEVS---NGPIPS-FATFLERRGH 61
I+ CIILHNMIVEDER+GY N Q D ++ V + +PS A + R
Sbjct: 102 IMRVCIILHNMIVEDERDGYTHLNVSEFQHGEDAGSSHVDLTYSTDMPSNIANMMGVRTR 161
Query: 62 MSQREIHRQLQADLVEHIW 80
+ +++H++L+ADL+EHIW
Sbjct: 162 IRDKQMHQRLKADLIEHIW 180
>UniRef100_Q8RUP5 Simiar to ribosomal protein [Oryza sativa]
Length = 310
Score = 55.5 bits (132), Expect = 3e-07
Identities = 33/79 (41%), Positives = 44/79 (54%), Gaps = 6/79 (7%)
Query: 6 QILYACIILHNMIVEDEREGYNGNFVYDQVDND----IITAEVSNGPIPSFATFLERRGH 61
+I+ AC+ILHNMIVEDERE D +N + EV+ G FA + ++
Sbjct: 225 RIMLACVILHNMIVEDERE--EATIHIDLNENPGASFALPPEVNIGGNLCFADVMRKKAT 282
Query: 62 MSQREIHRQLQADLVEHIW 80
+ R H QL+ DLVEHIW
Sbjct: 283 VRSRPQHTQLKNDLVEHIW 301
>UniRef100_Q9C845 Hypothetical protein F8D11.12 [Arabidopsis thaliana]
Length = 333
Score = 55.1 bits (131), Expect = 4e-07
Identities = 34/85 (40%), Positives = 44/85 (51%), Gaps = 15/85 (17%)
Query: 7 ILYACIILHNMIVEDEREGYN----GNFVY------DQVDNDIITAEVSNGPIPSFATFL 56
I+ ACIILHNMIVED+R+GY FV+ QVD T SN +
Sbjct: 247 IMRACIILHNMIVEDKRDGYTQFDVSEFVHPESASSSQVDFTYATVMPSN-----LGNMM 301
Query: 57 ERRGHMSQREIHRQLQADLVEHIWE 81
+ R H +L+ADLVEH+W+
Sbjct: 302 ATGARVRDRIKHEELKADLVEHVWQ 326
>UniRef100_Q84QX6 Hypothetical protein OSJNBa0093I13.9 [Oryza sativa]
Length = 626
Score = 55.1 bits (131), Expect = 4e-07
Identities = 34/83 (40%), Positives = 44/83 (52%), Gaps = 8/83 (9%)
Query: 5 MQILYACIILHNMIVEDEREGYNGNFVYDQVDND----IITAEVSNG--PIPSFATFLER 58
+ I+ AC+IL NMIVEDE+E D +N ++ EV N P P FA L R
Sbjct: 541 INIMEACVILRNMIVEDEQE--MAEIPLDLNENPGASFVLPPEVRNSSDPNPCFAAVLRR 598
Query: 59 RGHMSQREIHRQLQADLVEHIWE 81
+ R H QL+ DLV HIW+
Sbjct: 599 NSSIRDRAKHMQLKKDLVAHIWQ 621
>UniRef100_Q94I59 Hypothetical protein OSJNBa0084C09.13 [Oryza sativa]
Length = 377
Score = 52.8 bits (125), Expect = 2e-06
Identities = 27/83 (32%), Positives = 50/83 (59%), Gaps = 2/83 (2%)
Query: 7 ILYACIILHNMIVEDEREGYNGNFVYDQVDNDIITAE-VSNGPIPSFATFLERRGHMSQR 65
I+ AC+I+HNMI+++ER+ + +F YDQ D++++ E FL+ + +
Sbjct: 188 IMIACVIMHNMIIDNERD-EDVDFDYDQGDSEVLRKEDYQRRDKHVLEKFLKIHKEIEDQ 246
Query: 66 EIHRQLQADLVEHIWELSESRNN 88
+ H QL+ DLV+++W L +R +
Sbjct: 247 QAHEQLRDDLVKYLWALHGARGH 269
>UniRef100_Q8RUR0 OSJNBa0026J14.30 protein [Oryza sativa]
Length = 626
Score = 51.6 bits (122), Expect = 5e-06
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 7 ILYACIILHNMIVEDEREGYNGNFVYDQVDNDIITAEVSNGPIPSFATFLERRGHMSQRE 66
I+ AC+I+HNMI+EDE E + +N VS+ IP F++ + E
Sbjct: 550 IMKACVIMHNMIIEDEGEVDWEERFPEGGEN----VRVSHDEIPDLDDFIQMHKKIRDDE 605
Query: 67 IHRQLQADLVEHIWE 81
H QL+ DLVEH+W+
Sbjct: 606 THYQLREDLVEHLWQ 620
>UniRef100_Q6K1V9 Ribosomal protein-like [Oryza sativa]
Length = 916
Score = 51.6 bits (122), Expect = 5e-06
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 7 ILYACIILHNMIVEDEREGYNGNFVYDQVDNDIITAEVSNGPIPSFATFLERRGHMSQRE 66
I+ AC+I+HNMI+EDE E + +N VS+ IP F++ + E
Sbjct: 840 IMKACVIMHNMIIEDEGEVDWEERFPEGGEN----VRVSHDEIPDLDDFIQMHKKIRDDE 895
Query: 67 IHRQLQADLVEHIWE 81
H QL+ DLVEH+W+
Sbjct: 896 THYQLREDLVEHLWQ 910
>UniRef100_Q6AU78 Hypothetical protein OSJNBa0014C03.5 [Oryza sativa]
Length = 446
Score = 51.6 bits (122), Expect = 5e-06
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 7 ILYACIILHNMIVEDEREGYNGNFVYDQVDNDIITAEVSNGPIPSFATFLERRGHMSQRE 66
I+ AC+I+HNMI+EDE E + +N VS+ IP F++ + E
Sbjct: 370 IMKACVIMHNMIIEDEGEVDWEERFPEGGEN----VRVSHDEIPDLDDFIQMHKKIRDDE 425
Query: 67 IHRQLQADLVEHIWE 81
H QL+ DLVEH+W+
Sbjct: 426 THYQLREDLVEHLWQ 440
>UniRef100_Q5VR44 Ribosomal protein-like [Oryza sativa]
Length = 428
Score = 51.6 bits (122), Expect = 5e-06
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 7 ILYACIILHNMIVEDEREGYNGNFVYDQVDNDIITAEVSNGPIPSFATFLERRGHMSQRE 66
I+ AC+I+HNMI+EDE E + +N VS+ IP F++ + E
Sbjct: 352 IMKACVIMHNMIIEDEGEVDWEERFPEGGEN----VRVSHDEIPDLDDFIQMHKKIRDDE 407
Query: 67 IHRQLQADLVEHIWE 81
H QL+ DLVEH+W+
Sbjct: 408 THYQLREDLVEHLWQ 422
>UniRef100_Q9LIK4 Gb|AAD28316.1 [Arabidopsis thaliana]
Length = 157
Score = 50.8 bits (120), Expect = 8e-06
Identities = 27/82 (32%), Positives = 45/82 (53%), Gaps = 2/82 (2%)
Query: 7 ILYACIILHNMIVEDEREGYNGNFVYDQVDNDIITAEVSNGPIPSFATFLERRGHMSQRE 66
I+ +CII+HNMI+EDER+ + ++V+ I E++ F FL R + RE
Sbjct: 78 IMTSCIIMHNMIIEDERD--IDAPIEERVEVPIEEVEMTGDDDTRFQEFLARHRQIKDRE 135
Query: 67 IHRQLQADLVEHIWELSESRNN 88
H +L+ L++H+W + N
Sbjct: 136 AHIELRNALIKHLWSQYTNSEN 157
>UniRef100_Q8H956 B protein [Oryza sativa]
Length = 455
Score = 49.7 bits (117), Expect = 2e-05
Identities = 30/81 (37%), Positives = 41/81 (50%), Gaps = 10/81 (12%)
Query: 7 ILYACIILHNMIVEDEREGYNGNFVYDQVD-------NDIITAEVSNGPIPSFATFLERR 59
++ CIILHNMIVEDE+E + + +D + + E S LE+
Sbjct: 359 VVLGCIILHNMIVEDEKE---ARLIEENLDLNEPASSSTVQAPEFSPDQHVPLERILEKD 415
Query: 60 GHMSQREIHRQLQADLVEHIW 80
M R HR+L+ DLVEHIW
Sbjct: 416 TSMRDRLAHRRLKNDLVEHIW 436
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.327 0.141 0.432
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 136,368,500
Number of Sequences: 2790947
Number of extensions: 4594077
Number of successful extensions: 14125
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 14061
Number of HSP's gapped (non-prelim): 46
length of query: 88
length of database: 848,049,833
effective HSP length: 64
effective length of query: 24
effective length of database: 669,429,225
effective search space: 16066301400
effective search space used: 16066301400
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 68 (30.8 bits)
Lotus: description of TM0223.17