BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0214.10
(74 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q8GWC2 Putative eukaryotic translation initiation fact... 74 9e-13
UniRef100_O82341 Eukaryotic translation initiation factor 3 delt... 74 9e-13
UniRef100_Q94KS2 TGF-beta receptor-interacting protein 1 [Phaseo... 74 1e-12
UniRef100_Q38884 Eukaryotic translation initiation factor 3 subu... 74 1e-12
UniRef100_Q60EF6 Putative TGF-beta receptor interacting protein ... 60 1e-08
UniRef100_Q6YS69 Putative TGF-beta receptor-interacting protein ... 60 1e-08
UniRef100_Q5R7R2 Hypothetical protein DKFZp470B1412 [Pongo pygma... 58 5e-08
UniRef100_UPI00003AC60B UPI00003AC60B UniRef100 entry 55 3e-07
UniRef100_Q66J51 Eif3s2 protein [Xenopus laevis] 55 3e-07
UniRef100_Q9QZD9 Eukaryotic translation initiation factor 3 subu... 55 3e-07
UniRef100_Q13347 Eukaryotic translation initiation factor 3 subu... 55 3e-07
UniRef100_P79083 Eukaryotic translation initiation factor 3 39 k... 55 6e-07
UniRef100_O02195 Eukaryotic translation initiation factor 3 subu... 54 8e-07
UniRef100_UPI000035ED03 UPI000035ED03 UniRef100 entry 54 1e-06
UniRef100_UPI00002F927C UPI00002F927C UniRef100 entry 54 1e-06
UniRef100_UPI00002B8E72 UPI00002B8E72 UniRef100 entry 54 1e-06
UniRef100_Q7ZV55 Eukaryotic translation initiation factor 3, sub... 54 1e-06
UniRef100_UPI0000432277 UPI0000432277 UniRef100 entry 52 3e-06
UniRef100_UPI0000432276 UPI0000432276 UniRef100 entry 52 3e-06
UniRef100_UPI000042919E UPI000042919E UniRef100 entry 52 5e-06
>UniRef100_Q8GWC2 Putative eukaryotic translation initiation factor 3 delta subunit
[Arabidopsis thaliana]
Length = 355
Score = 73.9 bits (180), Expect = 9e-13
Identities = 40/71 (56%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 2 VLRGGQVASAVSTTDHHAGNFEAKFYDMILQEEFRDVKGHSGLINVMAFIMEERPALSDP 61
VL GGQ ASAV+TTDH AG FEAKFYD ILQEE VKGH G IN +AF + + + S
Sbjct: 277 VLGGGQDASAVTTTDHRAGKFEAKFYDTILQEEIGGVKGHFGPINALAFSPDGK-SFSSG 335
Query: 62 VSDGHVLVQFY 72
DG+V + +
Sbjct: 336 GEDGYVRLHHF 346
>UniRef100_O82341 Eukaryotic translation initiation factor 3 delta subunit
[Arabidopsis thaliana]
Length = 328
Score = 73.9 bits (180), Expect = 9e-13
Identities = 40/71 (56%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 2 VLRGGQVASAVSTTDHHAGNFEAKFYDMILQEEFRDVKGHSGLINVMAFIMEERPALSDP 61
VL GGQ ASAV+TTDH AG FEAKFYD ILQEE VKGH G IN +AF + + + S
Sbjct: 250 VLGGGQDASAVTTTDHRAGKFEAKFYDTILQEEIGGVKGHFGPINALAFSPDGK-SFSSG 308
Query: 62 VSDGHVLVQFY 72
DG+V + +
Sbjct: 309 GEDGYVRLHHF 319
>UniRef100_Q94KS2 TGF-beta receptor-interacting protein 1 [Phaseolus vulgaris]
Length = 326
Score = 73.6 bits (179), Expect = 1e-12
Identities = 40/71 (56%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 2 VLRGGQVASAVSTTDHHAGNFEAKFYDMILQEEFRDVKGHSGLINVMAFIMEERPALSDP 61
VL GGQ ASAV+TTDH AG FEAKFYD ILQEE VKGH G IN +AF + + + S
Sbjct: 248 VLGGGQDASAVTTTDHRAGKFEAKFYDKILQEEIGGVKGHFGPINALAFNPDGK-SFSSG 306
Query: 62 VSDGHVLVQFY 72
DG+V + +
Sbjct: 307 GEDGYVRLHHF 317
>UniRef100_Q38884 Eukaryotic translation initiation factor 3 subunit 2 [Arabidopsis
thaliana]
Length = 328
Score = 73.6 bits (179), Expect = 1e-12
Identities = 40/71 (56%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 2 VLRGGQVASAVSTTDHHAGNFEAKFYDMILQEEFRDVKGHSGLINVMAFIMEERPALSDP 61
VL GGQ ASAV+TTDH AG FEAKFYD ILQEE VKGH G IN +AF + + + S
Sbjct: 250 VLGGGQDASAVTTTDHRAGKFEAKFYDKILQEEIGGVKGHFGPINALAFNPDGK-SFSSG 308
Query: 62 VSDGHVLVQFY 72
DG+V + +
Sbjct: 309 GEDGYVRLHHF 319
>UniRef100_Q60EF6 Putative TGF-beta receptor interacting protein [Oryza sativa]
Length = 326
Score = 60.1 bits (144), Expect = 1e-08
Identities = 34/71 (47%), Positives = 43/71 (59%), Gaps = 1/71 (1%)
Query: 2 VLRGGQVASAVSTTDHHAGNFEAKFYDMILQEEFRDVKGHSGLINVMAFIMEERPALSDP 61
V+ GGQ A V+ TD AG FEAKF+ ILQEE VKGH G IN +AF + R + S
Sbjct: 248 VIGGGQDAMNVTMTDRRAGKFEAKFFHKILQEEIGGVKGHFGPINALAFNPDGR-SFSSG 306
Query: 62 VSDGHVLVQFY 72
DG+V + +
Sbjct: 307 GEDGYVRLHHF 317
>UniRef100_Q6YS69 Putative TGF-beta receptor-interacting protein [Oryza sativa]
Length = 326
Score = 60.1 bits (144), Expect = 1e-08
Identities = 34/71 (47%), Positives = 43/71 (59%), Gaps = 1/71 (1%)
Query: 2 VLRGGQVASAVSTTDHHAGNFEAKFYDMILQEEFRDVKGHSGLINVMAFIMEERPALSDP 61
V+ GGQ A V+ TD AG FEAKF+ ILQEE VKGH G IN +AF + R + S
Sbjct: 248 VIGGGQDAMNVTMTDRRAGKFEAKFFHKILQEEIGGVKGHFGPINALAFNPDGR-SFSSG 306
Query: 62 VSDGHVLVQFY 72
DG+V + +
Sbjct: 307 GEDGYVRLHHF 317
>UniRef100_Q5R7R2 Hypothetical protein DKFZp470B1412 [Pongo pygmaeus]
Length = 325
Score = 58.2 bits (139), Expect = 5e-08
Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 2 VLRGGQVASAVSTTDHHAGNFEAKFYDMILQEEFRDVKGHSGLINVMAFIMEERPALSDP 61
VL GGQ A V+TT G FEA+F+ + +EEF VKGH GLIN +AF + + + S
Sbjct: 245 VLGGGQEAMDVTTTSTRIGKFEARFFHLAFEEEFGRVKGHFGLINSVAFHPDGK-SYSSG 303
Query: 62 VSDGHVLVQFY 72
DG+V + ++
Sbjct: 304 GEDGYVRIHYF 314
>UniRef100_UPI00003AC60B UPI00003AC60B UniRef100 entry
Length = 325
Score = 55.5 bits (132), Expect = 3e-07
Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 2 VLRGGQVASAVSTTDHHAGNFEAKFYDMILQEEFRDVKGHSGLINVMAFIMEERPALSDP 61
VL GGQ A V+TT G FEA+F+ + +EEF VKGH G IN +AF + + + S
Sbjct: 245 VLGGGQEAMDVTTTSTRIGKFEARFFHLAFEEEFGRVKGHFGPINSVAFHPDGK-SYSSG 303
Query: 62 VSDGHVLVQFY 72
DG+V + ++
Sbjct: 304 GEDGYVRIHYF 314
>UniRef100_Q66J51 Eif3s2 protein [Xenopus laevis]
Length = 325
Score = 55.5 bits (132), Expect = 3e-07
Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 2 VLRGGQVASAVSTTDHHAGNFEAKFYDMILQEEFRDVKGHSGLINVMAFIMEERPALSDP 61
VL GGQ A V+TT G FEA+F+ + +EEF VKGH G IN +AF + + + S
Sbjct: 245 VLGGGQEAMDVTTTSTRIGKFEARFFHVAFEEEFGRVKGHFGPINSLAFHPDGK-SYSSG 303
Query: 62 VSDGHVLVQFY 72
DG+V + ++
Sbjct: 304 GEDGYVRIHYF 314
>UniRef100_Q9QZD9 Eukaryotic translation initiation factor 3 subunit 2 [Mus musculus]
Length = 325
Score = 55.5 bits (132), Expect = 3e-07
Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 2 VLRGGQVASAVSTTDHHAGNFEAKFYDMILQEEFRDVKGHSGLINVMAFIMEERPALSDP 61
VL GGQ A V+TT G FEA+F+ + +EEF VKGH G IN +AF + + + S
Sbjct: 245 VLGGGQEAMDVTTTSTRIGKFEARFFHLAFEEEFGRVKGHFGPINSVAFHPDGK-SYSSG 303
Query: 62 VSDGHVLVQFY 72
DG+V + ++
Sbjct: 304 GEDGYVRIHYF 314
>UniRef100_Q13347 Eukaryotic translation initiation factor 3 subunit 2 [Homo sapiens]
Length = 325
Score = 55.5 bits (132), Expect = 3e-07
Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 2 VLRGGQVASAVSTTDHHAGNFEAKFYDMILQEEFRDVKGHSGLINVMAFIMEERPALSDP 61
VL GGQ A V+TT G FEA+F+ + +EEF VKGH G IN +AF + + + S
Sbjct: 245 VLGGGQEAMDVTTTSTRIGKFEARFFHLAFEEEFGRVKGHFGPINSVAFHPDGK-SYSSG 303
Query: 62 VSDGHVLVQFY 72
DG+V + ++
Sbjct: 304 GEDGYVRIHYF 314
>UniRef100_P79083 Eukaryotic translation initiation factor 3 39 kDa subunit
[Schizosaccharomyces pombe]
Length = 328
Score = 54.7 bits (130), Expect = 6e-07
Identities = 31/71 (43%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 2 VLRGGQVASAVSTTDHHAGNFEAKFYDMILQEEFRDVKGHSGLINVMAFIMEERPALSDP 61
+L GGQ A V+TT G FEA+FY IL+EE VKGH G IN +A + + +
Sbjct: 248 ILGGGQEARDVTTTAARQGKFEARFYHAILEEELGRVKGHFGPINTIA-VHPKGTGYASG 306
Query: 62 VSDGHVLVQFY 72
DG+V V F+
Sbjct: 307 GEDGYVRVHFF 317
>UniRef100_O02195 Eukaryotic translation initiation factor 3 subunit 2 [Drosophila
melanogaster]
Length = 326
Score = 54.3 bits (129), Expect = 8e-07
Identities = 31/71 (43%), Positives = 43/71 (59%), Gaps = 1/71 (1%)
Query: 2 VLRGGQVASAVSTTDHHAGNFEAKFYDMILQEEFRDVKGHSGLINVMAFIMEERPALSDP 61
VL GGQ A V+TT AG F+++F+ +I +EEF +KGH G IN +AF + + S
Sbjct: 247 VLGGGQDAMEVTTTSTKAGKFDSRFFHLIYEEEFARLKGHFGPINSLAFHPDGKSYASGG 306
Query: 62 VSDGHVLVQFY 72
DG V VQ +
Sbjct: 307 -EDGFVRVQTF 316
>UniRef100_UPI000035ED03 UPI000035ED03 UniRef100 entry
Length = 336
Score = 53.9 bits (128), Expect = 1e-06
Identities = 29/71 (40%), Positives = 42/71 (58%), Gaps = 1/71 (1%)
Query: 2 VLRGGQVASAVSTTDHHAGNFEAKFYDMILQEEFRDVKGHSGLINVMAFIMEERPALSDP 61
V+ GGQ A V+TT G FEA+F+ +EEF VKGH G IN +AF + + + S
Sbjct: 257 VMGGGQEAMEVTTTSTRIGKFEARFFHAAYEEEFGRVKGHFGPINCVAFHPDGK-SYSSG 315
Query: 62 VSDGHVLVQFY 72
DG+V + ++
Sbjct: 316 GEDGYVRIHYF 326
>UniRef100_UPI00002F927C UPI00002F927C UniRef100 entry
Length = 325
Score = 53.9 bits (128), Expect = 1e-06
Identities = 29/71 (40%), Positives = 42/71 (58%), Gaps = 1/71 (1%)
Query: 2 VLRGGQVASAVSTTDHHAGNFEAKFYDMILQEEFRDVKGHSGLINVMAFIMEERPALSDP 61
V+ GGQ A V+TT G FEA+F+ +EEF VKGH G IN +AF + + + S
Sbjct: 245 VMGGGQEAMEVTTTSTRIGKFEARFFHAAYEEEFGRVKGHFGPINCVAFHPDGK-SYSSG 303
Query: 62 VSDGHVLVQFY 72
DG+V + ++
Sbjct: 304 GEDGYVRIHYF 314
>UniRef100_UPI00002B8E72 UPI00002B8E72 UniRef100 entry
Length = 246
Score = 53.9 bits (128), Expect = 1e-06
Identities = 29/68 (42%), Positives = 41/68 (59%), Gaps = 1/68 (1%)
Query: 2 VLRGGQVASAVSTTDHHAGNFEAKFYDMILQEEFRDVKGHSGLINVMAFIMEERPALSDP 61
VL GGQ A AV+TT AG F++K Y I +EE ++GH G IN +AF + R + +
Sbjct: 169 VLGGGQDAMAVTTTSSKAGKFDSKIYHKIFEEEIGGIRGHFGPINALAFNPDGR-SFTSG 227
Query: 62 VSDGHVLV 69
DG+V +
Sbjct: 228 GEDGYVRI 235
>UniRef100_Q7ZV55 Eukaryotic translation initiation factor 3, subunit 2 beta
[Brachydanio rerio]
Length = 325
Score = 53.9 bits (128), Expect = 1e-06
Identities = 29/71 (40%), Positives = 42/71 (58%), Gaps = 1/71 (1%)
Query: 2 VLRGGQVASAVSTTDHHAGNFEAKFYDMILQEEFRDVKGHSGLINVMAFIMEERPALSDP 61
V+ GGQ A V+TT G FEA+F+ +EEF VKGH G IN +AF + + + S
Sbjct: 245 VMGGGQEAMEVTTTSTRIGKFEARFFHAAYEEEFGRVKGHFGPINCVAFHPDGK-SYSSG 303
Query: 62 VSDGHVLVQFY 72
DG+V + ++
Sbjct: 304 GEDGYVRIHYF 314
>UniRef100_UPI0000432277 UPI0000432277 UniRef100 entry
Length = 320
Score = 52.4 bits (124), Expect = 3e-06
Identities = 28/71 (39%), Positives = 42/71 (58%), Gaps = 1/71 (1%)
Query: 2 VLRGGQVASAVSTTDHHAGNFEAKFYDMILQEEFRDVKGHSGLINVMAFIMEERPALSDP 61
VL GGQ A V+TT G F+++F+ ++ +EEF +KGH G IN +AF R + S
Sbjct: 241 VLGGGQDAMDVTTTSTRQGKFDSRFFHLVFEEEFARLKGHFGPINSLAFHPNGR-SFSTG 299
Query: 62 VSDGHVLVQFY 72
DG+V + +
Sbjct: 300 GEDGYVRINTF 310
>UniRef100_UPI0000432276 UPI0000432276 UniRef100 entry
Length = 319
Score = 52.4 bits (124), Expect = 3e-06
Identities = 28/71 (39%), Positives = 42/71 (58%), Gaps = 1/71 (1%)
Query: 2 VLRGGQVASAVSTTDHHAGNFEAKFYDMILQEEFRDVKGHSGLINVMAFIMEERPALSDP 61
VL GGQ A V+TT G F+++F+ ++ +EEF +KGH G IN +AF R + S
Sbjct: 239 VLGGGQDAMDVTTTSTRQGKFDSRFFHLVFEEEFARLKGHFGPINSLAFHPNGR-SFSTG 297
Query: 62 VSDGHVLVQFY 72
DG+V + +
Sbjct: 298 GEDGYVRINTF 308
>UniRef100_UPI000042919E UPI000042919E UniRef100 entry
Length = 543
Score = 51.6 bits (122), Expect = 5e-06
Identities = 26/52 (50%), Positives = 35/52 (67%)
Query: 2 VLRGGQVASAVSTTDHHAGNFEAKFYDMILQEEFRDVKGHSGLINVMAFIME 53
VL GGQ A+ V+TT G FEA+F+ + +EEF VKGH G IN +AF ++
Sbjct: 224 VLGGGQEATDVTTTYTRFGKFEARFFHLAFEEEFGRVKGHFGPINSVAFHLD 275
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.320 0.137 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 117,285,384
Number of Sequences: 2790947
Number of extensions: 3519387
Number of successful extensions: 6880
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 6834
Number of HSP's gapped (non-prelim): 47
length of query: 74
length of database: 848,049,833
effective HSP length: 50
effective length of query: 24
effective length of database: 708,502,483
effective search space: 17004059592
effective search space used: 17004059592
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 68 (30.8 bits)
Lotus: description of TM0214.10