BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0207.9
         (758 letters)

Database: uniref100 
           2,790,947 sequences; 848,049,833 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

UniRef100_Q9FW98 Putative non-LTR retroelement reverse transcrip...   348  4e-94
UniRef100_Q9C697 Reverse transcriptase, putative; 16838-20266 [A...   345  3e-93
UniRef100_Q6I5L7 Hypothetical protein OSJNBb0088F07.2 [Oryza sat...   339  2e-91
UniRef100_Q8S6P1 Putative reverse transcriptase [Oryza sativa]        327  6e-88
UniRef100_Q7XGD3 Putative retroelement [Oryza sativa]                 313  1e-83
UniRef100_Q8S5K1 Putative retroelement [Oryza sativa]                 313  1e-83
UniRef100_O22148 Putative non-LTR retroelement reverse transcrip...   307  7e-82
UniRef100_Q9SIS9 Putative non-LTR retroelement reverse transcrip...   307  9e-82
UniRef100_Q7XLZ5 OSJNBa0086O06.14 protein [Oryza sativa]              305  3e-81
UniRef100_Q7X970 BZIP-like protein [Oryza sativa]                     301  5e-80
UniRef100_Q75M12 Hypothetical protein P0676G05.2 [Oryza sativa]       296  2e-78
UniRef100_Q9SJ38 Putative non-LTR retroelement reverse transcrip...   294  6e-78
UniRef100_Q9M1F2 Hypothetical protein F9K21.130 [Arabidopsis tha...   291  6e-77
UniRef100_Q9SIQ5 Putative non-LTR retroelement reverse transcrip...   290  1e-76
UniRef100_Q9SKJ4 Putative non-LTR retroelement reverse transcrip...   289  2e-76
UniRef100_Q7XJS2 Putative non-LTR retroelement reverse transcrip...   288  3e-76
UniRef100_Q9FYK1 F21J9.30 [Arabidopsis thaliana]                      283  1e-74
UniRef100_Q9FXJ5 F5A9.24 [Arabidopsis thaliana]                       283  1e-74
UniRef100_Q9SN65 Hypothetical protein F25I24.40 [Arabidopsis tha...   282  3e-74
UniRef100_O81630 F8M12.22 protein [Arabidopsis thaliana]              282  3e-74

>UniRef100_Q9FW98 Putative non-LTR retroelement reverse transcriptase [Oryza sativa]
          Length = 1382

 Score =  348 bits (892), Expect = 4e-94
 Identities = 190/444 (42%), Positives = 265/444 (58%), Gaps = 6/444 (1%)

Query: 250 EDGWRMRTYPGF--LMDIF-STLFTTSNPMGIEAATSLVANRLNKGHLAILNTPFSGEKV 306
           +DG R  +  G   + ++F   LF++     +E     + N++       L   ++ E++
Sbjct: 390 DDGSRCISQEGIKRMAEVFYENLFSSEPCDSMEEVLDAIPNKVGDFINGELGKQYTNEEI 449

Query: 307 REPLFQMHPTKASGLDGLHTLFYQKFWHIVGDDVAHFCLSVLQGRVSPGTIIPTLLVLIP 366
           +  LFQM  TKA G DG   LFYQ  W I+ + + +     L G   P  +  +++VLIP
Sbjct: 450 KTALFQMGSTKAPGPDGFPALFYQTHWGILEEHICNAVRGFLLGEEIPEGLCDSVVVLIP 509

Query: 367 KIKKSVHATHFRPISLCNVPFKIIT*TLANKLKIVLPDIISGPQSAFVPGRLVTDNALVA 426
           K+  + H + FRPISLCNV +KI +  LAN+LK  LPDI+S  QSAFVPGRL+TD+ALVA
Sbjct: 510 KVNNASHLSKFRPISLCNVLYKIASKVLANRLKPFLPDIVSEFQSAFVPGRLITDSALVA 569

Query: 427 YECFHFMKKKIYGCNGIMALKLDMSKAYDRVEWPFLRSALEKMGFPVNWVSFIMDYVTTV 486
           YEC H ++K+ +  N   ALK+DM KAYDRVEW +L   L K+GF  +W++ +M  V++V
Sbjct: 570 YECLHTIRKQ-HNKNPFFALKIDMMKAYDRVEWAYLSGCLSKLGFSQDWINTVMRCVSSV 628

Query: 487 LFQVMLNGNPQVPFDPGRGLRQGDPLSPYLFLICGEVFSALIQRKIGASHLSGIKIARNV 546
            + V +NG    P  P RG+RQGDP+SPYLFL+C E  S L+ +K  A  L GIK  R+ 
Sbjct: 629 RYAVKINGELTKPVVPSRGIRQGDPISPYLFLLCTEGLSCLLHKKEVAGELQGIKNGRH- 687

Query: 547 SAPVISHLLFADDNVIFARATREEASCVKGILAEYDKVYVQVINFDKSMLSYSRNVPSLY 606
             P ISHLLFADD++ FA+A       +K  L  Y     Q IN  KS + + +  P   
Sbjct: 688 -GPPISHLLFADDSIFFAKADSRNVQALKNTLRSYCSASGQKINLHKSSIFFGKRCPDAV 746

Query: 607 FNELKMLLGVKAMDNYDRYLGLPTIIGKSKTQIFRFVKERDWKKLKGRKEPSLSRAGREV 666
              +K  L V      D YLG+PT IG + T  F+F+ ER WK++ G  +  LSRAG E 
Sbjct: 747 KISVKSCLQVDNEVLQDSYLGMPTEIGLATTNFFKFLPERIWKRVNGWTDRPLSRAGMET 806

Query: 667 LIKAVAQEIPAYIMSCFILPDNLC 690
           ++KAVAQ IP Y+MSCF +P ++C
Sbjct: 807 MLKAVAQAIPNYVMSCFRIPVSIC 830


>UniRef100_Q9C697 Reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score =  345 bits (885), Expect = 3e-93
 Identities = 185/433 (42%), Positives = 267/433 (60%), Gaps = 10/433 (2%)

Query: 266 FSTLFTTSNPMGIEAATS----LVANRLNKGHLAILNTPFSGEKVREPLFQMHPTKASGL 321
           F  LFTT+NP   + A      L+ +R+N     +L    +  +VR  LF +HP KA G 
Sbjct: 177 FQNLFTTANPQVFDEALGEVQVLITDRIND----LLTADATECEVRAALFMIHPEKAPGP 232

Query: 322 DGLHTLFYQKFWHIVGDDVAHFCLSVLQGRVSPGTIIPTLLVLIPKIKKSVHATHFRPIS 381
           DG+  LF+QK W I+  D+     S LQ  V    +  T + LIPK ++    T  RPIS
Sbjct: 233 DGMTALFFQKSWAIIKSDLLSLVNSFLQEGVFDKRLNTTNICLIPKTERPTRMTELRPIS 292

Query: 382 LCNVPFKIIT*TLANKLKIVLPDIISGPQSAFVPGRLVTDNALVAYECFHFMKKKIYGCN 441
           LCNV +K+I+  L  +LK VLP++IS  QSAFV GRL++DN L+A E FH ++      +
Sbjct: 293 LCNVGYKVISKILCQRLKTVLPNLISETQSAFVDGRLISDNILIAQEMFHGLRTNSSCKD 352

Query: 442 GIMALKLDMSKAYDRVEWPFLRSALEKMGFPVNWVSFIMDYVTTVLFQVMLNGNPQVPFD 501
             MA+K DMSKAYD+VEW F+ + L KMGF   W+S+IM  +TTV ++V++NG P+    
Sbjct: 353 KFMAIKTDMSKAYDQVEWNFIEALLRKMGFCEKWISWIMWCITTVQYKVLINGQPKGLII 412

Query: 502 PGRGLRQGDPLSPYLFLICGEVFSALIQRKIGASHLSGIKIARNVSAPVISHLLFADDNV 561
           P RGLRQGDPLSPYLF++C EV  A I++    + ++GIK+A    +P +SHLLFADD++
Sbjct: 413 PERGLRQGDPLSPYLFILCTEVLIANIRKAERQNLITGIKVA--TPSPAVSHLLFADDSL 470

Query: 562 IFARATREEASCVKGILAEYDKVYVQVINFDKSMLSYSRNVPSLYFNELKMLLGVKAMDN 621
            F +A +E+   +  IL +Y+ V  Q INF KS + +   V      ++K++LG+  +  
Sbjct: 471 FFCKANKEQCGIILEILKQYESVSGQQINFSKSSIQFGHKVEDSIKADIKLILGIHNLGG 530

Query: 622 YDRYLGLPTIIGKSKTQIFRFVKERDWKKLKGRKEPSLSRAGREVLIKAVAQEIPAYIMS 681
              YLGLP  +G SKT++F FV++R   ++ G     LS+ G+EV+IK+VA  +P Y+MS
Sbjct: 531 MGSYLGLPESLGGSKTKVFSFVRDRLQSRINGWSAKFLSKGGKEVMIKSVAATLPRYVMS 590

Query: 682 CFILPDNLCADST 694
           CF LP  + +  T
Sbjct: 591 CFRLPKAITSKLT 603


>UniRef100_Q6I5L7 Hypothetical protein OSJNBb0088F07.2 [Oryza sativa]
          Length = 1264

 Score =  339 bits (870), Expect = 2e-91
 Identities = 185/430 (43%), Positives = 263/430 (61%), Gaps = 2/430 (0%)

Query: 261  FLMDIFSTLFTTSNPMGIEAATSLVANRLNKGHLAILNTPFSGEKVREPLFQMHPTKASG 320
            F+ + +  LF ++    ++A    V  R+       L  P+  E+V   L  M   KA G
Sbjct: 736  FISNQYQQLFRSNGCSQMDAVLQCVQARVTPEMREGLAAPYQREEVWVALKDMGDLKAPG 795

Query: 321  LDGLHTLFYQKFWHIVGDDVAHFCLSVLQGRVSPGTIIPTLLVLIPKIKKSVHATHFRPI 380
             DG+  +FY+KF  + GD V    L+VL G   P     T++VLIPK K+       RPI
Sbjct: 796  ADGIPAIFYKKFLSLAGDKVKDEVLAVLNGGDMPQGWNDTVVVLIPKTKQPDTLKDLRPI 855

Query: 381  SLCNVPFKIIT*TLANKLKIVLPDIISGPQSAFVPGRLVTDNALVAYECFHFMKKKIYGC 440
            SLCNV +K+I+  + N+LK+VL +IIS  QSAFVP RL+T N L+AYE  H++ ++  G 
Sbjct: 856  SLCNVAYKLISKVIVNRLKVVLLEIISPSQSAFVPRRLITYNVLLAYELTHYLNQRKKGK 915

Query: 441  NGIMALKLDMSKAYDRVEWPFLRSALEKMGFPVNWVSFIMDYVTTVLFQVMLNGNPQVPF 500
            NG+ A+KLDMSKAYDRVEW FLR  + ++GF   WV+ +M  VT+V +++ +NG      
Sbjct: 916  NGVAAIKLDMSKAYDRVEWDFLRHMMLRLGFHDQWVNLVMKCVTSVTYRIKINGEHSDQI 975

Query: 501  DPGRGLRQGDPLSPYLFLICGEVFSALIQRKIGASHLSGIKIARNVSAPVISHLLFADDN 560
             P RGLRQGDPLSPYLF+IC E  SAL+Q+      + GIK+ R+   P I+HL FADD+
Sbjct: 976  YPQRGLRQGDPLSPYLFIICAEGLSALLQKAQADGKIEGIKVCRD--TPRINHLFFADDS 1033

Query: 561  VIFARATREEASCVKGILAEYDKVYVQVINFDKSMLSYSRNVPSLYFNELKMLLGVKAMD 620
            ++  RA + +A  ++ +L  Y+    QVIN DKS + +S N       E++  L +    
Sbjct: 1034 LVLMRAGQNDAQELRRVLNIYEVASGQVINKDKSSVLFSPNTLQSDRMEVRSALCINQEA 1093

Query: 621  NYDRYLGLPTIIGKSKTQIFRFVKERDWKKLKGRKEPSLSRAGREVLIKAVAQEIPAYIM 680
              +RYLGLP  IGKS+ + F ++K + W +++G +E  LS+AG+E+L+KAVAQ IP Y M
Sbjct: 1094 KNERYLGLPVSIGKSRRKAFEYIKRKVWLRIQGWQEKLLSKAGKEILVKAVAQAIPTYAM 1153

Query: 681  SCFILPDNLC 690
            SCF L   LC
Sbjct: 1154 SCFDLTKGLC 1163


>UniRef100_Q8S6P1 Putative reverse transcriptase [Oryza sativa]
          Length = 1509

 Score =  327 bits (839), Expect = 6e-88
 Identities = 181/394 (45%), Positives = 242/394 (60%), Gaps = 27/394 (6%)

Query: 297  LNTPFSGEKVREPLFQMHPTKASGLDGLHTLFYQKFWHIVGDDVAHFCLSVLQGRVSPGT 356
            L   F+ E+V+E L  +   KA G DG+   FY+  W +VG+ V    L VL+G   P  
Sbjct: 650  LRAEFTREEVKEALDAIGDLKAPGPDGMPAGFYKACWDVVGEKVTVEVLEVLRGGAIPEG 709

Query: 357  IIPTLLVLIPKIKKSVHATHFRPISLCNVPFKIIT*TLANKLKIVLPDIISGPQSAFVPG 416
               T +VLIPK+                         LAN+LK +LPD+IS  QSAFVPG
Sbjct: 710  WNDTTIVLIPKV-------------------------LANRLKKILPDVISPAQSAFVPG 744

Query: 417  RLVTDNALVAYECFHFMKKKIYGCNGIMALKLDMSKAYDRVEWPFLRSALEKMGFPVNWV 476
            RL++DN L+AYE  H+M+ K  G  G  A KLDMSKAYDRVEW FL   + K+GF  +WV
Sbjct: 745  RLISDNILIAYEMTHYMRNKRSGQVGYAAFKLDMSKAYDRVEWSFLHDMMLKLGFHTDWV 804

Query: 477  SFIMDYVTTVLFQVMLNGNPQVPFDPGRGLRQGDPLSPYLFLICGEVFSALIQRKIGASH 536
            + IM  V+TV +++ +NG     F P RGLRQGDPLSPYLFL+C E FSAL+ +      
Sbjct: 805  NLIMKCVSTVTYRIRVNGELSESFSPERGLRQGDPLSPYLFLLCAEGFSALLSKTEEEGR 864

Query: 537  LSGIKIARNVSAPVISHLLFADDNVIFARATREEASCVKGILAEYDKVYVQVINFDKSML 596
            L GI+I +   AP +SHLLFADD++I  RA   EA  ++ IL  Y++   QVIN DKS +
Sbjct: 865  LHGIRICQ--GAPSVSHLLFADDSLILCRANGGEAQQLQTILQIYEECSGQVINKDKSAV 922

Query: 597  SYSRNVPSLYFNELKMLLGVKAMDNYDRYLGLPTIIGKSKTQIFRFVKERDWKKLKGRKE 656
             +S N  SL    +   L ++     ++YLGLP  +G+S+T+IF ++KER W++++G KE
Sbjct: 923  MFSPNTSSLEKGAVMAALNMQRETTNEKYLGLPVFVGRSRTKIFSYLKERIWQRIQGWKE 982

Query: 657  PSLSRAGREVLIKAVAQEIPAYIMSCFILPDNLC 690
              LSRAG+E+LIKAVAQ IP + M CF L  +LC
Sbjct: 983  KLLSRAGKEILIKAVAQVIPTFAMGCFELTKDLC 1016


>UniRef100_Q7XGD3 Putative retroelement [Oryza sativa]
          Length = 1694

 Score =  313 bits (802), Expect = 1e-83
 Identities = 174/431 (40%), Positives = 250/431 (57%), Gaps = 3/431 (0%)

Query: 264  DIFSTLFTTSNPMGIEAATSLVANRLNKGHLAILNTPFSGEKVREPLFQMHPTKASGLDG 323
            + F  LFT    +     TSL+  ++       L   FS E++   LFQ+ P KA G DG
Sbjct: 1005 EYFQRLFTADPSIDHSRVTSLMKPKVTDAMNEELCKTFSEEEIANALFQIGPLKAPGPDG 1064

Query: 324  LHTLFYQKFWHIVGDDVAHFCLSVLQGRVSPGTIIPTLLVLIPKIKKSVHATHFRPISLC 383
                FYQ+ W I+ DD+             P  +  T +VLIPK ++      FRPISLC
Sbjct: 1065 FPGRFYQRNWAILKDDIVRAVQEFFSLGTMPSGVNETAIVLIPKTEQPQELKDFRPISLC 1124

Query: 384  NVPFKIIT*TLANKLKIVLPDIISGPQSAFVPGRLVTDNALVAYECFHFMKKKIYGCNGI 443
            NV +KI++  L N+L+ +L D++S  QSAFVPGRL+TDNAL+A+E FH +++     N  
Sbjct: 1125 NVVYKIVSKCLVNRLRPILDDLVSQNQSAFVPGRLITDNALIAFEYFHHIQRNKNPENAY 1184

Query: 444  MALKLDMSKAYDRVEWPFLRSALEKMGFPVNWVSFIMDYVTTVLFQVMLNGNPQVPFDPG 503
             A KLD+SKAYDRV+W FL  A+ K+GF   WV +IM  +T V + V LNG     F P 
Sbjct: 1185 SAYKLDLSKAYDRVDWEFLEQAMVKLGFAHCWVKWIMACITLVRYAVKLNGTLLNTFAPS 1244

Query: 504  RGLRQGDPLSPYLFLICGEVFSALIQRKIGASHLSGIKIARNVSAPVISHLLFADDNVIF 563
            RGLRQGDPLSP+LFL   +  S L++ K+    ++ I I R+  AP + HLLFADD  +F
Sbjct: 1245 RGLRQGDPLSPFLFLFVADGLSFLLEEKVDQGAMNPIHICRH--APAVLHLLFADDTPLF 1302

Query: 564  ARATREEASCVKGILAEYDKVYVQVINFDKSMLSYSRNVPSLYFNELKMLLGVKAMDNYD 623
             +A  ++A  +K +L  Y     Q+IN  K  + + ++ P+   N++K  L + +    D
Sbjct: 1303 FKAANDQAVVMKEVLETYASCTGQLINPSKCSIMFGQSSPTAVQNQIKQTLQI-SNSFED 1361

Query: 624  RYLGLPTIIGKSKTQIFRFVKERDWKKLKGRKEPSLSRAGREVLIKAVAQEIPAYIMSCF 683
            +YLG PT  G+     F+ ++ER WK++    E  LS  G+E+LIKAV Q +P Y+M  F
Sbjct: 1362 KYLGFPTPEGRMTKGKFQSLQERLWKRIMLWGEKFLSTGGKEILIKAVLQAMPVYVMGLF 1421

Query: 684  ILPDNLCADST 694
             LP+++C + T
Sbjct: 1422 KLPESVCEELT 1432


>UniRef100_Q8S5K1 Putative retroelement [Oryza sativa]
          Length = 1888

 Score =  313 bits (802), Expect = 1e-83
 Identities = 174/431 (40%), Positives = 250/431 (57%), Gaps = 3/431 (0%)

Query: 264  DIFSTLFTTSNPMGIEAATSLVANRLNKGHLAILNTPFSGEKVREPLFQMHPTKASGLDG 323
            + F  LFT    +     TSL+  ++       L   FS E++   LFQ+ P KA G DG
Sbjct: 962  EYFQRLFTADPSIDHSRVTSLMKPKVTDAMNEELCKTFSEEEIANALFQIGPLKAPGPDG 1021

Query: 324  LHTLFYQKFWHIVGDDVAHFCLSVLQGRVSPGTIIPTLLVLIPKIKKSVHATHFRPISLC 383
                FYQ+ W I+ DD+             P  +  T +VLIPK ++      FRPISLC
Sbjct: 1022 FPGRFYQRNWAILKDDIVRAVQEFFSLGTMPSGVNETAIVLIPKTEQPQELKDFRPISLC 1081

Query: 384  NVPFKIIT*TLANKLKIVLPDIISGPQSAFVPGRLVTDNALVAYECFHFMKKKIYGCNGI 443
            NV +KI++  L N+L+ +L D++S  QSAFVPGRL+TDNAL+A+E FH +++     N  
Sbjct: 1082 NVVYKIVSKCLVNRLRPILDDLVSQNQSAFVPGRLITDNALIAFEYFHHIQRNKNPENAY 1141

Query: 444  MALKLDMSKAYDRVEWPFLRSALEKMGFPVNWVSFIMDYVTTVLFQVMLNGNPQVPFDPG 503
             A KLD+SKAYDRV+W FL  A+ K+GF   WV +IM  +T V + V LNG     F P 
Sbjct: 1142 SAYKLDLSKAYDRVDWEFLEQAMVKLGFAHCWVKWIMACITLVRYAVKLNGTLLNTFAPS 1201

Query: 504  RGLRQGDPLSPYLFLICGEVFSALIQRKIGASHLSGIKIARNVSAPVISHLLFADDNVIF 563
            RGLRQGDPLSP+LFL   +  S L++ K+    ++ I I R+  AP + HLLFADD  +F
Sbjct: 1202 RGLRQGDPLSPFLFLFVADGLSFLLEEKVDQGAMNPIHICRH--APAVLHLLFADDTPLF 1259

Query: 564  ARATREEASCVKGILAEYDKVYVQVINFDKSMLSYSRNVPSLYFNELKMLLGVKAMDNYD 623
             +A  ++A  +K +L  Y     Q+IN  K  + + ++ P+   N++K  L + +    D
Sbjct: 1260 FKAANDQAVVMKEVLETYASCTGQLINPSKCSIMFGQSSPTAVQNQIKQTLQI-SNSFED 1318

Query: 624  RYLGLPTIIGKSKTQIFRFVKERDWKKLKGRKEPSLSRAGREVLIKAVAQEIPAYIMSCF 683
            +YLG PT  G+     F+ ++ER WK++    E  LS  G+E+LIKAV Q +P Y+M  F
Sbjct: 1319 KYLGFPTPEGRMTKGKFQSLQERLWKRIMLWGEKFLSTGGKEILIKAVLQAMPVYVMGLF 1378

Query: 684  ILPDNLCADST 694
             LP+++C + T
Sbjct: 1379 KLPESVCEELT 1389


>UniRef100_O22148 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1374

 Score =  307 bits (787), Expect = 7e-82
 Identities = 164/413 (39%), Positives = 244/413 (58%), Gaps = 6/413 (1%)

Query: 278 IEAATSLVANRLNKGHLAILNTPFSGEKVREPLFQMHPTKASGLDGLHTLFYQKFWHIVG 337
           +E  T LV++++N   LA    P + E+V+   F ++P K  G DG++   YQ+FW  +G
Sbjct: 409 LENLTPLVSDQMNNNLLA----PITKEEVQRATFSINPHKCPGPDGMNGFLYQQFWETMG 464

Query: 338 DDVAHFCLSVLQGRVSPGTIIPTLLVLIPKIKKSVHATHFRPISLCNVPFKIIT*TLANK 397
           D +     +  +       +  T + LIPKI K+   T FRPISLCNV +K+I   +AN+
Sbjct: 465 DQITEMVQAFFRSGSIEEGMNKTNICLIPKILKAEKMTDFRPISLCNVIYKVIGKLMANR 524

Query: 398 LKIVLPDIISGPQSAFVPGRLVTDNALVAYECFHFMKKKIYGCNGIMALKLDMSKAYDRV 457
           LK +LP +IS  Q+AFV GRL++DN L+A+E  H +          +A+K D+SKAYDRV
Sbjct: 525 LKKILPSLISETQAAFVKGRLISDNILIAHELLHALSSNNKCSEEFIAIKTDISKAYDRV 584

Query: 458 EWPFLRSALEKMGFPVNWVSFIMDYVTTVLFQVMLNGNPQVPFDPGRGLRQGDPLSPYLF 517
           EWPFL  A+  +GF  +W+  IM+ V +V +QV++NG P     P RGLRQGDPLSPYLF
Sbjct: 585 EWPFLEKAMRGLGFADHWIRLIMECVKSVRYQVLINGTPHGEIIPSRGLRQGDPLSPYLF 644

Query: 518 LICGEVFSALIQRKIGASHLSGIKIARNVSAPVISHLLFADDNVIFARATREEASCVKGI 577
           +IC E+   ++Q     + ++G+K+AR   AP ISHLLFADD++ + +   E    +  I
Sbjct: 645 VICTEMLVKMLQSAEQKNQITGLKVAR--GAPPISHLLFADDSMFYCKVNDEALGQIIRI 702

Query: 578 LAEYDKVYVQVINFDKSMLSYSRNVPSLYFNELKMLLGVKAMDNYDRYLGLPTIIGKSKT 637
           + EY     Q +N+ KS + + +++       +K  LG++       YLGLP     SK 
Sbjct: 703 IEEYSLASGQRVNYLKSSIYFGKHISEERRCLVKRKLGIEREGGEGVYLGLPESFQGSKV 762

Query: 638 QIFRFVKERDWKKLKGRKEPSLSRAGREVLIKAVAQEIPAYIMSCFILPDNLC 690
               ++K+R  KK+ G +   LS  G+E+L+KAVA  +P Y MSCF +P  +C
Sbjct: 763 ATLSYLKDRLGKKVLGWQSNFLSPGGKEILLKAVAMALPTYTMSCFKIPKTIC 815


>UniRef100_Q9SIS9 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1715

 Score =  307 bits (786), Expect = 9e-82
 Identities = 162/425 (38%), Positives = 252/425 (59%), Gaps = 2/425 (0%)

Query: 266  FSTLFTTSNPMGIEAATSLVANRLNKGHLAILNTPFSGEKVREPLFQMHPTKASGLDGLH 325
            F+ LFTT+     E   S +A ++ +     L    + ++VR+ +F +   +A G DG  
Sbjct: 755  FADLFTTTQTSDWEEIISGIAPKVTEQMNHELLQSVTDQEVRDAVFAIGADRAPGFDGFT 814

Query: 326  TLFYQKFWHIVGDDVAHFCLSVLQGRVSPGTIIPTLLVLIPKIKKSVHATHFRPISLCNV 385
              FY   W ++G+DV        +  V    I  T + LIPKI    H + +RPISLC  
Sbjct: 815  AAFYHHLWDLIGNDVCLMVRHFFESDVMDNQINQTQICLIPKIIDPKHMSDYRPISLCTA 874

Query: 386  PFKIIT*TLANKLKIVLPDIISGPQSAFVPGRLVTDNALVAYECFHFMKKKIYGCNGIMA 445
             +KII+  L  +LK  L D+IS  Q+AFVPG+ ++DN LVA+E  H +K +    +G +A
Sbjct: 875  SYKIISKILIKRLKQCLGDVISDSQAAFVPGQNISDNVLVAHELLHSLKSRRECQSGYVA 934

Query: 446  LKLDMSKAYDRVEWPFLRSALEKMGFPVNWVSFIMDYVTTVLFQVMLNGNPQVPFDPGRG 505
            +K D+SKAYDRVEW FL   + ++GF   WV +IM  VT+V ++V++NG+P     P RG
Sbjct: 935  VKTDISKAYDRVEWNFLEKVMIQLGFAPRWVKWIMTCVTSVSYEVLINGSPYGKIFPSRG 994

Query: 506  LRQGDPLSPYLFLICGEVFSALIQRKIGASHLSGIKIARNVSAPVISHLLFADDNVIFAR 565
            +RQGDPLSPYLFL C EV S ++++      + G+KI ++  A  ISHLLFADD++ F R
Sbjct: 995  IRQGDPLSPYLFLFCAEVLSNMLRKAEVNKQIHGMKITKDCLA--ISHLLFADDSLFFCR 1052

Query: 566  ATREEASCVKGILAEYDKVYVQVINFDKSMLSYSRNVPSLYFNELKMLLGVKAMDNYDRY 625
            A+ +    +  I  +Y++   Q IN+ KS + + + +P++    L  LLG+  +    +Y
Sbjct: 1053 ASNQNIEQLALIFKKYEEASGQKINYAKSSIIFGQKIPTMRRQRLHRLLGIDNVRGGGKY 1112

Query: 626  LGLPTIIGKSKTQIFRFVKERDWKKLKGRKEPSLSRAGREVLIKAVAQEIPAYIMSCFIL 685
            LGLP  +G+ K ++F ++  +  ++ +G     LS AG+E++IKA+A  +P Y M+CF+L
Sbjct: 1113 LGLPEQLGRRKVELFEYIVTKVKERTEGWAYNYLSPAGKEIVIKAIAMALPVYSMNCFLL 1172

Query: 686  PDNLC 690
            P  +C
Sbjct: 1173 PTLIC 1177


>UniRef100_Q7XLZ5 OSJNBa0086O06.14 protein [Oryza sativa]
          Length = 1205

 Score =  305 bits (782), Expect = 3e-81
 Identities = 170/397 (42%), Positives = 242/397 (60%), Gaps = 2/397 (0%)

Query: 296 ILNTPFSGEKVREPLFQMHPTKASGLDGLHTLFYQKFWHIVGDDVAHFCLSVLQGRVSPG 355
           +L  PF+ E++ + LFQ+ P KA G DG    F+Q+ W ++  DV        +      
Sbjct: 411 MLTKPFTDEEISDALFQIGPLKAPGPDGFPARFFQRNWGVLKRDVIEGVREFFETGEWKE 470

Query: 356 TIIPTLLVLIPKIKKSVHATHFRPISLCNVPFKIIT*TLANKLKIVLPDIISGPQSAFVP 415
            +  T++V+IPK    V    FRP+SLCNV +K++   L N+L+ +L +IIS  QSAFVP
Sbjct: 471 GMNDTVIVMIPKTNAPVEMKDFRPVSLCNVIYKVVAKCLVNRLRPLLQEIISETQSAFVP 530

Query: 416 GRLVTDNALVAYECFHFMKKKIYGCNGIMALKLDMSKAYDRVEWPFLRSALEKMGFPVNW 475
           GR++TDNALVA+ECFH + K         ALKLD+SKAYDRV+W FL  AL+K+GF   W
Sbjct: 531 GRMITDNALVAFECFHSIHKCTRESQDFCALKLDLSKAYDRVDWGFLDGALQKLGFGNIW 590

Query: 476 VSFIMDYVTTVLFQVMLNGNPQVPFDPGRGLRQGDPLSPYLFLICGEVFSALIQRKIGAS 535
             +IM  VT+V + V LNGN   PF P RGLR+GDPL+PYLFL   +  S ++QR+    
Sbjct: 591 RKWIMSCVTSVRYSVRLNGNMLEPFYPTRGLREGDPLNPYLFLFIADGLSNILQRRRDER 650

Query: 536 HLSGIKIARNVSAPVISHLLFADDNVIFARATREEASCVKGILAEYDKVYVQVINFDKSM 595
            +  +K+ R  SAP +SHLLFADD+++F +A   +A+ +K  L  Y++   Q+IN  +  
Sbjct: 651 QIQPLKVCR--SAPGVSHLLFADDSLLFFKAEVIQATRIKEALDLYERCTGQLINPKECS 708

Query: 596 LSYSRNVPSLYFNELKMLLGVKAMDNYDRYLGLPTIIGKSKTQIFRFVKERDWKKLKGRK 655
           L +S   P    + +K +L V+     D+ LGLPT  G+ K + F+ +KER  K+L    
Sbjct: 709 LLFSALCPQERQDGIKAVLQVERTCFDDKCLGLPTPDGRMKAEQFQPIKERFEKRLTDWS 768

Query: 656 EPSLSRAGREVLIKAVAQEIPAYIMSCFILPDNLCAD 692
           E  LS AG+E LIK+VAQ +P Y M  F +P+  C +
Sbjct: 769 ERFLSLAGKEALIKSVAQALPTYTMGVFKMPERFCEE 805


>UniRef100_Q7X970 BZIP-like protein [Oryza sativa]
          Length = 2367

 Score =  301 bits (771), Expect = 5e-80
 Identities = 172/432 (39%), Positives = 253/432 (57%), Gaps = 4/432 (0%)

Query: 264  DIFSTLFTTSNPMGIEAATSLVANRLNKGHLAILNTPFSGEKVREPLFQMHPTKASGLDG 323
            + F  ++T    +  E  T L+  ++       L   F+ +++ + +FQ+ P K+ G DG
Sbjct: 1125 EYFQDVYTADPNLNPETVTRLIQEKVTDIMNEKLCEDFTEDEISQAIFQIGPLKSPGPDG 1184

Query: 324  LHTLFYQKFWHIVGDDVAHFCLSVLQGRVSPGTIIPTLLVLIPKIKKSVHATHFRPISLC 383
                FYQ+ W  +  D+        Q  + P  +  T +VLIPK ++ V    FRPISLC
Sbjct: 1185 FPARFYQRNWGTIKADIIGAVRRFFQTGLMPEGVNDTAIVLIPKKEQPVDLRDFRPISLC 1244

Query: 384  NVPFKIIT*TLANKLKIVLPDIISGPQSAFVPGRLVTDNALVAYECFHFMKKKIYGCNGI 443
            NV +K+++  L N+L+ +L D++S  QSAFV GR++TDNAL+A+ECFH M+K     +  
Sbjct: 1245 NVVYKVVSKCLVNRLRPILDDLVSVEQSAFVQGRMITDNALLAFECFHAMQKNKKANHAA 1304

Query: 444  MALKLDMSKAYDRVEWPFLRSALEKMGFPVNWVSFIMDYVTTVLFQVMLNGNPQVPFDPG 503
             A KLD+SKAYDRV+W FL  A+ K+GF   WV++IM  VT+V + V  NG     F P 
Sbjct: 1305 CAYKLDLSKAYDRVDWRFLEMAMNKLGFARRWVNWIMKCVTSVRYMVKFNGTLLQSFAPT 1364

Query: 504  RGLRQGDPLSPYLFLICGEVFSALIQRKIGASHLSGIKIARNVSAPVISHLLFADDNVIF 563
            RGLRQGDPL P+LFL   +  S L++ K+  + L+  K+ R  +AP ISHLLFADD ++F
Sbjct: 1365 RGLRQGDPLLPFLFLFVADGLSLLLKEKVAQNSLTPFKVCR--AAPGISHLLFADDTLLF 1422

Query: 564  ARATREEASCVKGILAEYDKVYVQVINFDK-SMLSYSRNVPSLYFNELKMLLGVKAMDNY 622
             +A + EA  VK +L+ Y     Q+IN  K S+L    + P++    +  +L V+     
Sbjct: 1423 FKAHQREAEVVKEVLSSYAMGTGQLINPAKCSILMGGASTPAV-SEAISEILQVERDRFE 1481

Query: 623  DRYLGLPTIIGKSKTQIFRFVKERDWKKLKGRKEPSLSRAGREVLIKAVAQEIPAYIMSC 682
            DRYLG PT  G+     F+ ++ + WK++    E  LS  G+EVLIKAV Q IP Y+M  
Sbjct: 1482 DRYLGFPTPEGRMHKGRFQSLQAKIWKRVIQWGENHLSTGGKEVLIKAVIQAIPVYVMGI 1541

Query: 683  FILPDNLCADST 694
            F LP+++  D T
Sbjct: 1542 FKLPESVIDDLT 1553


>UniRef100_Q75M12 Hypothetical protein P0676G05.2 [Oryza sativa]
          Length = 1936

 Score =  296 bits (758), Expect = 2e-78
 Identities = 166/431 (38%), Positives = 249/431 (57%), Gaps = 2/431 (0%)

Query: 264  DIFSTLFTTSNPMGIEAATSLVANRLNKGHLAILNTPFSGEKVREPLFQMHPTKASGLDG 323
            + F  ++     +  E+ T L   ++       L   F  E++ + +FQ+ P K+   DG
Sbjct: 1031 EYFQGVYKADPSLNPESVTRLFQEKVTDAMNEKLCQEFKEEEIAQAIFQIGPLKSPRPDG 1090

Query: 324  LHTLFYQKFWHIVGDDVAHFCLSVLQGRVSPGTIIPTLLVLIPKIKKSVHATHFRPISLC 383
                FYQ+ W  +  D+     +  Q  + P  +  T +VLIPK  + +    +RPISLC
Sbjct: 1091 FPARFYQRNWGTLKSDIILAVRNFFQSGLMPKGVNDTAIVLIPKKDQPIDLKDYRPISLC 1150

Query: 384  NVPFKIIT*TLANKLKIVLPDIISGPQSAFVPGRLVTDNALVAYECFHFMKKKIYGCNGI 443
            NV +K+++  L N+L+ +L D++S  QSAF+ GR++TDNAL+A+ECFH ++K     +  
Sbjct: 1151 NVVYKVVSKCLVNRLRPILDDLVSKEQSAFIQGRMITDNALLAFECFHSIQKNKKANSAA 1210

Query: 444  MALKLDMSKAYDRVEWPFLRSALEKMGFPVNWVSFIMDYVTTVLFQVMLNGNPQVPFDPG 503
             A KLD+SKAYDRV+W FL  AL K+GF   WVS+IM  VTTV + V  NG     F P 
Sbjct: 1211 CAYKLDLSKAYDRVDWRFLELALNKLGFAHRWVSWIMLCVTTVRYSVKFNGTLLRSFAPT 1270

Query: 504  RGLRQGDPLSPYLFLICGEVFSALIQRKIGASHLSGIKIARNVSAPVISHLLFADDNVIF 563
            RGLRQG+PLSP+LFL   +  S L++ K+  + L+ +KI R   AP IS+LLFADD ++F
Sbjct: 1271 RGLRQGEPLSPFLFLFVADGLSLLLKEKVAQNSLTPLKICR--QAPGISYLLFADDTLLF 1328

Query: 564  ARATREEASCVKGILAEYDKVYVQVINFDKSMLSYSRNVPSLYFNELKMLLGVKAMDNYD 623
             +A ++EA  VK +L  Y +   Q+IN  K  + +    PS    +++  L V+  +  D
Sbjct: 1329 FKAEKKEAEVVKEVLTNYAQGTGQLINPAKCSILFGEASPSSVSEDIRNTLQVERDNFED 1388

Query: 624  RYLGLPTIIGKSKTQIFRFVKERDWKKLKGRKEPSLSRAGREVLIKAVAQEIPAYIMSCF 683
            RYLG PT  G+     F+ ++ +  K++    E  LS  G+E+LIKAV Q IP Y+M  F
Sbjct: 1389 RYLGFPTPEGRMHKGRFQSLQAKIAKRVIQWGENFLSSGGKEILIKAVIQAIPVYVMGLF 1448

Query: 684  ILPDNLCADST 694
              PD++  + T
Sbjct: 1449 KFPDSVYDELT 1459


>UniRef100_Q9SJ38 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1229

 Score =  294 bits (753), Expect = 6e-78
 Identities = 153/425 (36%), Positives = 243/425 (57%), Gaps = 2/425 (0%)

Query: 266 FSTLFTTSNPMGIEAATSLVANRLNKGHLAILNTPFSGEKVREPLFQMHPTKASGLDGLH 325
           F  +FT+ +          +   +++G    L    + E+V++ +F ++ +KA G DG  
Sbjct: 288 FQQIFTSESDGDFSVVDEAIEPMVSQGDNDFLTRIPNDEEVKDAVFSINASKAPGPDGFT 347

Query: 326 TLFYQKFWHIVGDDVAHFCLSVLQGRVSPGTIIPTLLVLIPKIKKSVHATHFRPISLCNV 385
             FY  +WHI+  DV          +  P  +  T + LIPK         +RPI+LCN+
Sbjct: 348 AGFYHSYWHIISTDVGREIRLFFTSKNFPRRMNETHIRLIPKDLGPRKVADYRPIALCNI 407

Query: 386 PFKIIT*TLANKLKIVLPDIISGPQSAFVPGRLVTDNALVAYECFHFMKKKIYGCNGIMA 445
            +KI+   +  +++++LP +IS  QSAFVPGR+++DN L+ +E  HF++      +  MA
Sbjct: 408 FYKIVAKIMTKRMQLILPKLISENQSAFVPGRVISDNVLITHEVLHFLRTSSAKKHCSMA 467

Query: 446 LKLDMSKAYDRVEWPFLRSALEKMGFPVNWVSFIMDYVTTVLFQVMLNGNPQVPFDPGRG 505
           +K DMSKAYDRVEW FL+  L++ GF   W+ ++++ VT+V +  ++NG PQ    P RG
Sbjct: 468 VKTDMSKAYDRVEWDFLKKVLQRFGFHSIWIDWVLECVTSVSYSFLINGTPQGKVVPTRG 527

Query: 506 LRQGDPLSPYLFLICGEVFSALIQRKIGASHLSGIKIARNVSAPVISHLLFADDNVIFAR 565
           LRQGDPLSP LF++C EV S L  R      L G+++  +++ P ++HLLFADD + F++
Sbjct: 528 LRQGDPLSPCLFILCTEVLSGLCTRAQRLRQLPGVRV--SINGPRVNHLLFADDTMFFSK 585

Query: 566 ATREEASCVKGILAEYDKVYVQVINFDKSMLSYSRNVPSLYFNELKMLLGVKAMDNYDRY 625
           +  E  + +  IL+ Y K   Q INF KS +++S   P     ++K +L ++      +Y
Sbjct: 586 SDPESCNKLSEILSRYGKASGQSINFHKSSVTFSSKTPRSVKGQVKRILKIRKEGGTGKY 645

Query: 626 LGLPTIIGKSKTQIFRFVKERDWKKLKGRKEPSLSRAGREVLIKAVAQEIPAYIMSCFIL 685
           LGLP   G+ K  IF  + ++  +K        LS+AG++V++KAV   +P Y MSCF L
Sbjct: 646 LGLPEHFGRRKRDIFGAIIDKIRQKSHSWASRFLSQAGKQVMLKAVLASMPLYSMSCFKL 705

Query: 686 PDNLC 690
           P  LC
Sbjct: 706 PSALC 710


>UniRef100_Q9M1F2 Hypothetical protein F9K21.130 [Arabidopsis thaliana]
          Length = 851

 Score =  291 bits (744), Expect = 6e-77
 Identities = 158/438 (36%), Positives = 244/438 (55%), Gaps = 6/438 (1%)

Query: 261 FLMDIFSTLFTTSNPMGIEAATSLVANRLNKGHLAILNTPFSGEKVREPLFQMHPTKASG 320
           F  DIF+T     +P+      S V N +N      L   F   ++ E + Q+   KA G
Sbjct: 13  FFTDIFTTNGIQVSPIDFADFPSSVTNIINSE----LTQDFRDSEIFEAICQIGDDKAPG 68

Query: 321 LDGLHTLFYQKFWHIVGDDVAHFCLSVLQGRVSPGTIIPTLLVLIPKIKKSVHATHFRPI 380
            DGL   FY++ W IVG+DV        +      ++  T + +IPKI+     + +RPI
Sbjct: 69  PDGLTARFYKQCWDIVGNDVIKEVKLFFESSHMKTSVNHTNICMIPKIQNPQTLSDYRPI 128

Query: 381 SLCNVPFKIIT*TLANKLKIVLPDIISGPQSAFVPGRLVTDNALVAYECFHFMKKKIYGC 440
           +LCNV +K+I+  + N+LK  L  I+S  Q+AF+PGR++ DN ++A+E  H +K +    
Sbjct: 129 ALCNVLYKVISKCMVNRLKAHLNSIVSDSQAAFIPGRIINDNVMIAHEIMHSLKVRKRVS 188

Query: 441 NGIMALKLDMSKAYDRVEWPFLRSALEKMGFPVNWVSFIMDYVTTVLFQVMLNGNPQVPF 500
              MA+K D+SKAYDRVEW FL + +   GF   W+ +IM  V +V + V++NG+P    
Sbjct: 189 KTYMAVKTDVSKAYDRVEWDFLETTMRLFGFCDKWIGWIMAAVKSVHYSVLINGSPHGYI 248

Query: 501 DPGRGLRQGDPLSPYLFLICGEVFSALIQRKIGASHLSGIKIARNVSAPVISHLLFADDN 560
            P RG+RQGDPLSPYLF++CG++ S LI+ K  +  + G++I     AP I+HL FADD+
Sbjct: 249 SPTRGIRQGDPLSPYLFILCGDILSHLIKVKASSGDIRGVRIGN--GAPAITHLQFADDS 306

Query: 561 VIFARATREEASCVKGILAEYDKVYVQVINFDKSMLSYSRNVPSLYFNELKMLLGVKAMD 620
           + F +A       +K +   Y+    Q IN  KS++++   V       LK LL +    
Sbjct: 307 LFFCQANVRNCQALKDVFDVYEYYSGQKINVQKSLITFGSRVYGSTQTRLKTLLNIPNQG 366

Query: 621 NYDRYLGLPTIIGKSKTQIFRFVKERDWKKLKGRKEPSLSRAGREVLIKAVAQEIPAYIM 680
              +YLGLP   G+ K ++F ++ +R  ++        LS AG+E+L+K+VA  +P Y M
Sbjct: 367 GGGKYLGLPEQFGRKKKEMFNYIIDRVKERTASWSAKFLSPAGKEILLKSVALAMPVYAM 426

Query: 681 SCFILPDNLCADSTGVAM 698
           SCF LP  + ++   + M
Sbjct: 427 SCFKLPQGIVSEIESLLM 444


>UniRef100_Q9SIQ5 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1524

 Score =  290 bits (741), Expect = 1e-76
 Identities = 160/438 (36%), Positives = 243/438 (54%), Gaps = 6/438 (1%)

Query: 261 FLMDIFSTLFTTSNPMGIEAATSLVANRLNKGHLAILNTPFSGEKVREPLFQMHPTKASG 320
           F  +IFST     +P+      S V N +N      L   FS  ++ + + Q+   KA G
Sbjct: 548 FFTNIFSTNGIKVSPIDFADFKSTVTNTVNLD----LTKEFSDTEIYDAICQIGDDKAPG 603

Query: 321 LDGLHTLFYQKFWHIVGDDVAHFCLSVLQGRVSPGTIIPTLLVLIPKIKKSVHATHFRPI 380
            DGL   FY+  W IVG DV        +      +I  T + +IPKI      + +RPI
Sbjct: 604 PDGLTARFYKNCWDIVGYDVILEVKKFFETSFMKPSINHTNICMIPKITNPTTLSDYRPI 663

Query: 381 SLCNVPFKIIT*TLANKLKIVLPDIISGPQSAFVPGRLVTDNALVAYECFHFMKKKIYGC 440
           +LCNV +K+I+  L N+LK  L  I+S  Q+AF+PGR++ DN ++A+E  H +K +    
Sbjct: 664 ALCNVLYKVISKCLVNRLKSHLNSIVSDSQAAFIPGRIINDNVMIAHEVMHSLKVRKRVS 723

Query: 441 NGIMALKLDMSKAYDRVEWPFLRSALEKMGFPVNWVSFIMDYVTTVLFQVMLNGNPQVPF 500
              MA+K D+SKAYDRVEW FL + +   GF   W+ +IM  V +V + V++NG+P    
Sbjct: 724 KTYMAVKTDVSKAYDRVEWDFLETTMRLFGFCNKWIGWIMAAVKSVHYSVLINGSPHGYI 783

Query: 501 DPGRGLRQGDPLSPYLFLICGEVFSALIQRKIGASHLSGIKIARNVSAPVISHLLFADDN 560
            P RG+RQGDPLSPYLF++CG++ S LI  +  +  L G++I     AP I+HL FADD+
Sbjct: 784 TPTRGIRQGDPLSPYLFILCGDILSHLINGRASSGDLRGVRIGN--GAPAITHLQFADDS 841

Query: 561 VIFARATREEASCVKGILAEYDKVYVQVINFDKSMLSYSRNVPSLYFNELKMLLGVKAMD 620
           + F +A       +K +   Y+    Q IN  KSM+++   V     ++LK +L +    
Sbjct: 842 LFFCQANVRNCQALKDVFDVYEYYSGQKINVQKSMITFGSRVYGSTQSKLKQILEIPNQG 901

Query: 621 NYDRYLGLPTIIGKSKTQIFRFVKERDWKKLKGRKEPSLSRAGREVLIKAVAQEIPAYIM 680
              +YLGLP   G+ K ++F ++ +R  K+        LS AG+E+++K+VA  +P Y M
Sbjct: 902 GGGKYLGLPEQFGRKKKEMFEYIIDRVKKRTSTWSARFLSPAGKEIMLKSVALAMPVYAM 961

Query: 681 SCFILPDNLCADSTGVAM 698
           SCF LP  + ++   + M
Sbjct: 962 SCFKLPKGIVSEIESLLM 979


>UniRef100_Q9SKJ4 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1750

 Score =  289 bits (740), Expect = 2e-76
 Identities = 160/438 (36%), Positives = 242/438 (54%), Gaps = 6/438 (1%)

Query: 261  FLMDIFSTLFTTSNPMGIEAATSLVANRLNKGHLAILNTPFSGEKVREPLFQMHPTKASG 320
            F  +IFST     +P+      S V N +N      L   FS  ++ + + Q+   KA G
Sbjct: 774  FFTNIFSTNGIKVSPIDFADFKSTVTNTVNLD----LTKEFSDTEIYDAICQIGDDKAPG 829

Query: 321  LDGLHTLFYQKFWHIVGDDVAHFCLSVLQGRVSPGTIIPTLLVLIPKIKKSVHATHFRPI 380
             DGL   FY+  W IVG DV        +      +I  T + +IPKI      + +RPI
Sbjct: 830  PDGLTARFYKNCWDIVGYDVILEVKKFFETSFMKPSINHTNICMIPKITNPTTLSDYRPI 889

Query: 381  SLCNVPFKIIT*TLANKLKIVLPDIISGPQSAFVPGRLVTDNALVAYECFHFMKKKIYGC 440
            +LCNV +K+I+  L N+LK  L  I+S  Q+AF+PGR++ DN ++A+E  H +K +    
Sbjct: 890  ALCNVLYKVISKCLVNRLKSHLNSIVSDSQAAFIPGRIINDNVMIAHEVMHSLKVRKRVS 949

Query: 441  NGIMALKLDMSKAYDRVEWPFLRSALEKMGFPVNWVSFIMDYVTTVLFQVMLNGNPQVPF 500
               MA+K D+SKAYDRVEW FL + +   GF   W+ +IM  V +V + V++NG+P    
Sbjct: 950  KTYMAVKTDVSKAYDRVEWDFLETTMRLFGFCNKWIGWIMAAVKSVHYSVLINGSPHGYI 1009

Query: 501  DPGRGLRQGDPLSPYLFLICGEVFSALIQRKIGASHLSGIKIARNVSAPVISHLLFADDN 560
             P RG+RQGDPLSPYLF++CG++ S LI  +  +  L G++I     AP I+HL FADD+
Sbjct: 1010 TPTRGIRQGDPLSPYLFILCGDILSHLINGRASSGDLRGVRIGN--GAPAITHLQFADDS 1067

Query: 561  VIFARATREEASCVKGILAEYDKVYVQVINFDKSMLSYSRNVPSLYFNELKMLLGVKAMD 620
            + F +A       +K +   Y+    Q IN  KSM+++   V     + LK +L +    
Sbjct: 1068 LFFCQANVRNCQALKDVFDVYEYYSGQKINVQKSMITFGSRVYGSTQSRLKQILEIPNQG 1127

Query: 621  NYDRYLGLPTIIGKSKTQIFRFVKERDWKKLKGRKEPSLSRAGREVLIKAVAQEIPAYIM 680
               +YLGLP   G+ K ++F ++ +R  K+        LS AG+E+++K+VA  +P Y M
Sbjct: 1128 GGGKYLGLPEQFGRKKKEMFEYIIDRVKKRTSTWSARFLSPAGKEIMLKSVALAMPVYAM 1187

Query: 681  SCFILPDNLCADSTGVAM 698
            SCF LP  + ++   + M
Sbjct: 1188 SCFKLPKGIVSEIESLLM 1205


>UniRef100_Q7XJS2 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1344

 Score =  288 bits (738), Expect = 3e-76
 Identities = 163/439 (37%), Positives = 251/439 (57%), Gaps = 8/439 (1%)

Query: 261 FLMDIFSTLFTTSNPMGIEAATSLVANRLNKGHLAILNTPFSGEKVREPLFQMHPTKASG 320
           F  ++F++ +  ++   +E   + V + +N      L    +  +V   +F ++   A G
Sbjct: 370 FFENLFTSTYILTHNNHLEGLQAKVTSEMNHN----LIQEVTELEVYNAVFSINKESAPG 425

Query: 321 LDGLHTLFYQKFWHIVGDDVAHFCLSVLQGRVSPGTIIPTLLVLIPKIKKSVHATHFRPI 380
            DG   LF+Q+ W +V   +        +  V P     T + LIPKI      +  RPI
Sbjct: 426 PDGFTALFFQQHWDLVKHQILTEIFGFFETGVLPQDWNHTHICLIPKITSPQRMSDLRPI 485

Query: 381 SLCNVPFKIIT*TLANKLKIVLPDIISGPQSAFVPGRLVTDNALVAYECFHFMKKKIYGC 440
           SLC+V +KII+  L  +LK  LP I+S  QSAFVP RL++DN LVA+E  H ++      
Sbjct: 486 SLCSVLYKIISKILTQRLKKHLPAIVSTTQSAFVPQRLISDNILVAHEMIHSLRTNDRIS 545

Query: 441 NGIMALKLDMSKAYDRVEWPFLRSALEKMGFPVNWVSFIMDYVTTVLFQVMLNGNPQVPF 500
              MA K DMSKAYDRVEWPFL + +  +GF   W+S+IM+ VT+V + V++NG P    
Sbjct: 546 KEHMAFKTDMSKAYDRVEWPFLETMMTALGFNNKWISWIMNCVTSVSYSVLINGQPYGHI 605

Query: 501 DPGRGLRQGDPLSPYLFLICGEVFSALIQRKIGASHLSGIKIA-RNVSAPVISHLLFADD 559
            P RG+RQGDPLSP LF++C E    ++ +   A  ++GI+   + VS   ++HLLFADD
Sbjct: 606 IPTRGIRQGDPLSPALFVLCTEALIHILNKAEQAGKITGIQFQDKKVS---VNHLLFADD 662

Query: 560 NVIFARATREEASCVKGILAEYDKVYVQVINFDKSMLSYSRNVPSLYFNELKMLLGVKAM 619
            ++  +AT++E   +   L++Y ++  Q+IN +KS +++ +NV     + +K   G+   
Sbjct: 663 TLLMCKATKQECEELMQCLSQYGQLSGQMINLNKSAITFGKNVDIQIKDWIKSRSGISLE 722

Query: 620 DNYDRYLGLPTIIGKSKTQIFRFVKERDWKKLKGRKEPSLSRAGREVLIKAVAQEIPAYI 679
               +YLGLP  +  SK  +F F+KE+   +L G    +LS+ G+EVL+K++A  +P Y+
Sbjct: 723 GGTGKYLGLPECLSGSKRDLFGFIKEKLQSRLTGWYAKTLSQGGKEVLLKSIALALPVYV 782

Query: 680 MSCFILPDNLCADSTGVAM 698
           MSCF LP NLC   T V M
Sbjct: 783 MSCFKLPKNLCQKLTTVMM 801


>UniRef100_Q9FYK1 F21J9.30 [Arabidopsis thaliana]
          Length = 1270

 Score =  283 bits (724), Expect = 1e-74
 Identities = 163/425 (38%), Positives = 239/425 (55%), Gaps = 2/425 (0%)

Query: 266 FSTLFTTSNPMGIEAATSLVANRLNKGHLAILNTPFSGEKVREPLFQMHPTKASGLDGLH 325
           F  LF +SNP G     S +  R+++     L    S ++++E +F + P  A G DG+ 
Sbjct: 356 FGNLFKSSNPSGFTDWFSGLVPRVSEVMNESLVGEVSAQEIKEAVFSIKPASAPGPDGMS 415

Query: 326 TLFYQKFWHIVGDDVAHFCLSVLQGRVSPGTIIPTLLVLIPKIKKSVHATHFRPISLCNV 385
            LF+Q +W  VG+ V           + P     T L LIPK +        RPISLC+V
Sbjct: 416 ALFFQHYWSTVGNQVTSEVKKFFADGIMPAEWNYTHLCLIPKTQHPTEMVDLRPISLCSV 475

Query: 386 PFKIIT*TLANKLKIVLPDIISGPQSAFVPGRLVTDNALVAYECFHFMKKKIYGCNGIMA 445
            +KII+  +A +L+  LP+I+S  QSAFV  RL+TDN LVA+E  H +K      +  MA
Sbjct: 476 LYKIISKIMAKRLQPWLPEIVSDTQSAFVSERLITDNILVAHELVHSLKVHPRISSEFMA 535

Query: 446 LKLDMSKAYDRVEWPFLRSALEKMGFPVNWVSFIMDYVTTVLFQVMLNGNPQVPFDPGRG 505
           +K DMSKAYDRVEW +LRS L  +GF + WV++IM  V++V + V++N  P       RG
Sbjct: 536 VKSDMSKAYDRVEWSYLRSLLLSLGFHLKWVNWIMVCVSSVTYSVLINDCPFGLIILQRG 595

Query: 506 LRQGDPLSPYLFLICGEVFSALIQRKIGASHLSGIKIARNVSAPVISHLLFADDNVIFAR 565
           LRQGDPLSP+LF++C E  + L+ +      L GI+ + N   P++ HLLFADD++   +
Sbjct: 596 LRQGDPLSPFLFVLCTEGLTHLLNKAQWEGALEGIQFSEN--GPMVHHLLFADDSLFLCK 653

Query: 566 ATREEASCVKGILAEYDKVYVQVINFDKSMLSYSRNVPSLYFNELKMLLGVKAMDNYDRY 625
           A+RE++  ++ IL  Y     Q IN +KS +++   V       ++  LG+        Y
Sbjct: 654 ASREQSLVLQKILKVYGNATGQTINLNKSSITFGEKVDEQLKGTIRTCLGIFTEGGAGTY 713

Query: 626 LGLPTIIGKSKTQIFRFVKERDWKKLKGRKEPSLSRAGREVLIKAVAQEIPAYIMSCFIL 685
           LGLP     SK  +  ++K+R  +KL       LS+ G+EVL+K+VA  +P + MSCF L
Sbjct: 714 LGLPECFSGSKVDMLHYLKDRLKEKLDVWFTRCLSQGGKEVLLKSVALAMPVFAMSCFKL 773

Query: 686 PDNLC 690
           P   C
Sbjct: 774 PITTC 778


>UniRef100_Q9FXJ5 F5A9.24 [Arabidopsis thaliana]
          Length = 1254

 Score =  283 bits (724), Expect = 1e-74
 Identities = 163/425 (38%), Positives = 239/425 (55%), Gaps = 2/425 (0%)

Query: 266 FSTLFTTSNPMGIEAATSLVANRLNKGHLAILNTPFSGEKVREPLFQMHPTKASGLDGLH 325
           F  LF +SNP G     S +  R+++     L    S ++++E +F + P  A G DG+ 
Sbjct: 359 FGNLFKSSNPSGFTDWFSGLVPRVSEVMNESLVGEVSAQEIKEAVFSIKPASAPGPDGMS 418

Query: 326 TLFYQKFWHIVGDDVAHFCLSVLQGRVSPGTIIPTLLVLIPKIKKSVHATHFRPISLCNV 385
            LF+Q +W  VG+ V           + P     T L LIPK +        RPISLC+V
Sbjct: 419 ALFFQHYWSTVGNQVTSEVKKFFADGIMPAEWNYTHLCLIPKTQHPTEMVDLRPISLCSV 478

Query: 386 PFKIIT*TLANKLKIVLPDIISGPQSAFVPGRLVTDNALVAYECFHFMKKKIYGCNGIMA 445
            +KII+  +A +L+  LP+I+S  QSAFV  RL+TDN LVA+E  H +K      +  MA
Sbjct: 479 LYKIISKIMAKRLQPWLPEIVSDTQSAFVSERLITDNILVAHELVHSLKVHPRISSEFMA 538

Query: 446 LKLDMSKAYDRVEWPFLRSALEKMGFPVNWVSFIMDYVTTVLFQVMLNGNPQVPFDPGRG 505
           +K DMSKAYDRVEW +LRS L  +GF + WV++IM  V++V + V++N  P       RG
Sbjct: 539 VKSDMSKAYDRVEWSYLRSLLLSLGFHLKWVNWIMVCVSSVTYSVLINDCPFGLIILQRG 598

Query: 506 LRQGDPLSPYLFLICGEVFSALIQRKIGASHLSGIKIARNVSAPVISHLLFADDNVIFAR 565
           LRQGDPLSP+LF++C E  + L+ +      L GI+ + N   P++ HLLFADD++   +
Sbjct: 599 LRQGDPLSPFLFVLCTEGLTHLLNKAQWEGALEGIQFSEN--GPMVHHLLFADDSLFLCK 656

Query: 566 ATREEASCVKGILAEYDKVYVQVINFDKSMLSYSRNVPSLYFNELKMLLGVKAMDNYDRY 625
           A+RE++  ++ IL  Y     Q IN +KS +++   V       ++  LG+        Y
Sbjct: 657 ASREQSLVLQKILKVYGNATGQTINLNKSSITFGEKVDEQLKGTIRTCLGIFTEGGAGTY 716

Query: 626 LGLPTIIGKSKTQIFRFVKERDWKKLKGRKEPSLSRAGREVLIKAVAQEIPAYIMSCFIL 685
           LGLP     SK  +  ++K+R  +KL       LS+ G+EVL+K+VA  +P + MSCF L
Sbjct: 717 LGLPECFSGSKVDMLHYLKDRLKEKLDVWFTRCLSQGGKEVLLKSVALAMPVFAMSCFKL 776

Query: 686 PDNLC 690
           P   C
Sbjct: 777 PITTC 781


>UniRef100_Q9SN65 Hypothetical protein F25I24.40 [Arabidopsis thaliana]
          Length = 1294

 Score =  282 bits (721), Expect = 3e-74
 Identities = 148/382 (38%), Positives = 220/382 (56%), Gaps = 2/382 (0%)

Query: 317  KASGLDGLHTLFYQKFWHIVGDDVAHFCLSVLQGRVSPGTIIPTLLVLIPKIKKSVHATH 376
            KA G DGL   FY+  W IVG DV        +      +I  T + +IPKI      + 
Sbjct: 806  KAPGPDGLTARFYKSCWEIVGPDVIKEVKIFFRTSYMKQSINHTNICMIPKITNPETLSD 865

Query: 377  FRPISLCNVPFKIIT*TLANKLKIVLPDIISGPQSAFVPGRLVTDNALVAYECFHFMKKK 436
            +RPI+LCNV +KII+  L  +LK  L  I+S  Q+AF+PGRLV DN ++A+E  H +K +
Sbjct: 866  YRPIALCNVLYKIISKCLVERLKGHLDAIVSDSQAAFIPGRLVNDNVMIAHEMMHSLKTR 925

Query: 437  IYGCNGIMALKLDMSKAYDRVEWPFLRSALEKMGFPVNWVSFIMDYVTTVLFQVMLNGNP 496
                   MA+K D+SKAYDRVEW FL + +   GF   W+ +IM  V +V + V++NG P
Sbjct: 926  KRVSQSYMAVKTDVSKAYDRVEWNFLETTMRLFGFSETWIKWIMGAVKSVNYSVLVNGIP 985

Query: 497  QVPFDPGRGLRQGDPLSPYLFLICGEVFSALIQRKIGASHLSGIKIARNVSAPVISHLLF 556
                 P RG+RQGDPLSPYLF++C ++ + LI+ ++    + GI+I   V  P ++HL F
Sbjct: 986  HGTIQPQRGIRQGDPLSPYLFILCADILNHLIKNRVAEGDIRGIRIGNGV--PGVTHLQF 1043

Query: 557  ADDNVIFARATREEASCVKGILAEYDKVYVQVINFDKSMLSYSRNVPSLYFNELKMLLGV 616
            ADD++ F ++       +K +   Y+    Q IN  KSM+++   V     N LK +LG+
Sbjct: 1044 ADDSLFFCQSNVRNCQALKDVFDVYEYYSGQKINMSKSMITFGSRVHGTTQNRLKNILGI 1103

Query: 617  KAMDNYDRYLGLPTIIGKSKTQIFRFVKERDWKKLKGRKEPSLSRAGREVLIKAVAQEIP 676
            ++     +YLGLP   G+ K  +F ++ ER  K+        LS AG+E+++K+VA  +P
Sbjct: 1104 QSHGGGGKYLGLPEQFGRKKRDMFNYIIERVKKRTSSWSAKYLSPAGKEIMLKSVAMSMP 1163

Query: 677  AYIMSCFILPDNLCADSTGVAM 698
             Y MSCF LP N+ ++   + M
Sbjct: 1164 VYAMSCFKLPLNIVSEIEALLM 1185


>UniRef100_O81630 F8M12.22 protein [Arabidopsis thaliana]
          Length = 1662

 Score =  282 bits (721), Expect = 3e-74
 Identities = 148/382 (38%), Positives = 220/382 (56%), Gaps = 2/382 (0%)

Query: 317  KASGLDGLHTLFYQKFWHIVGDDVAHFCLSVLQGRVSPGTIIPTLLVLIPKIKKSVHATH 376
            KA G DGL   FY+  W IVG DV        +      +I  T + +IPKI      + 
Sbjct: 826  KAPGPDGLTARFYKSCWEIVGPDVIKEVKIFFRTSYMKQSINHTNICMIPKITNPETLSD 885

Query: 377  FRPISLCNVPFKIIT*TLANKLKIVLPDIISGPQSAFVPGRLVTDNALVAYECFHFMKKK 436
            +RPI+LCNV +KII+  L  +LK  L  I+S  Q+AF+PGRLV DN ++A+E  H +K +
Sbjct: 886  YRPIALCNVLYKIISKCLVERLKGHLDAIVSDSQAAFIPGRLVNDNVMIAHEMMHSLKTR 945

Query: 437  IYGCNGIMALKLDMSKAYDRVEWPFLRSALEKMGFPVNWVSFIMDYVTTVLFQVMLNGNP 496
                   MA+K D+SKAYDRVEW FL + +   GF   W+ +IM  V +V + V++NG P
Sbjct: 946  KRVSQSYMAVKTDVSKAYDRVEWNFLETTMRLFGFSETWIKWIMGAVKSVNYSVLVNGIP 1005

Query: 497  QVPFDPGRGLRQGDPLSPYLFLICGEVFSALIQRKIGASHLSGIKIARNVSAPVISHLLF 556
                 P RG+RQGDPLSPYLF++C ++ + LI+ ++    + GI+I   V  P ++HL F
Sbjct: 1006 HGTIQPQRGIRQGDPLSPYLFILCADILNHLIKNRVAEGDIRGIRIGNGV--PGVTHLQF 1063

Query: 557  ADDNVIFARATREEASCVKGILAEYDKVYVQVINFDKSMLSYSRNVPSLYFNELKMLLGV 616
            ADD++ F ++       +K +   Y+    Q IN  KSM+++   V     N LK +LG+
Sbjct: 1064 ADDSLFFCQSNVRNCQALKDVFDVYEYYSGQKINMSKSMITFGSRVHGTTQNRLKNILGI 1123

Query: 617  KAMDNYDRYLGLPTIIGKSKTQIFRFVKERDWKKLKGRKEPSLSRAGREVLIKAVAQEIP 676
            ++     +YLGLP   G+ K  +F ++ ER  K+        LS AG+E+++K+VA  +P
Sbjct: 1124 QSHGGGGKYLGLPEQFGRKKRDMFNYIIERVKKRTSSWSAKYLSPAGKEIMLKSVAMSMP 1183

Query: 677  AYIMSCFILPDNLCADSTGVAM 698
             Y MSCF LP N+ ++   + M
Sbjct: 1184 VYAMSCFKLPLNIVSEIEALLM 1205


  Database: uniref100
    Posted date:  Jan 5, 2005  1:24 AM
  Number of letters in database: 848,049,833
  Number of sequences in database:  2,790,947
  
Lambda     K      H
   0.334    0.146    0.460 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,193,651,327
Number of Sequences: 2790947
Number of extensions: 48055689
Number of successful extensions: 143388
Number of sequences better than 10.0: 899
Number of HSP's better than 10.0 without gapping: 568
Number of HSP's successfully gapped in prelim test: 332
Number of HSP's that attempted gapping in prelim test: 141604
Number of HSP's gapped (non-prelim): 1131
length of query: 758
length of database: 848,049,833
effective HSP length: 135
effective length of query: 623
effective length of database: 471,271,988
effective search space: 293602448524
effective search space used: 293602448524
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.6 bits)
S2: 79 (35.0 bits)