Lotus
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0199.8
         (105 letters)

Database: uniref100 
           2,790,947 sequences; 848,049,833 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

UniRef100_Q8S642 Putative endonuclease [Oryza sativa]                 149  2e-35
UniRef100_Q940T7 At1g02270/T6A9_9 [Arabidopsis thaliana]              145  3e-34
UniRef100_Q8GUH8 Hypothetical protein At5g54130 [Arabidopsis tha...   142  2e-33
UniRef100_O81916 Hypothetical calcium-binding protein At1g02270 ...   121  3e-27
UniRef100_Q9LVV7 Gb|AAC24386.1 [Arabidopsis thaliana]                 119  2e-26
UniRef100_UPI0000364D40 UPI0000364D40 UniRef100 entry                  32  3.6
UniRef100_Q7RS52 Vacuolar-type H+ pumping pyrophosphatase-relate...    32  4.7

>UniRef100_Q8S642 Putative endonuclease [Oryza sativa]
          Length = 483

 Score =  149 bits (375), Expect = 2e-35
 Identities = 70/104 (67%), Positives = 83/104 (79%)

Query: 2   YQILQYVESYQKENRFKSMSIVLCSDWNGSKLGHVYKFLRTQRFDSSYDTANKYIDSYAD 61
           Y+ILQY+E+YQ+E++   M I+LC DWNGSK G VYKFLR+Q F SSYDTA++Y DS  D
Sbjct: 208 YKILQYIEAYQEEHKLGPMPIILCGDWNGSKRGQVYKFLRSQGFVSSYDTAHQYSDSEED 267

Query: 62  LHK*VSHRNPRGNICGVDFICIFNPNQALKPLKTSWAEAVLTII 105
            HK VSHRN RGNICGVDFI + NPN++ KPLKTSW EAV  II
Sbjct: 268 AHKWVSHRNHRGNICGVDFIWLLNPNKSRKPLKTSWNEAVFGII 311


>UniRef100_Q940T7 At1g02270/T6A9_9 [Arabidopsis thaliana]
          Length = 484

 Score =  145 bits (365), Expect = 3e-34
 Identities = 68/104 (65%), Positives = 83/104 (79%), Gaps = 2/104 (1%)

Query: 2   YQILQYVESYQKENRFKSMSIVLCSDWNGSKLGHVYKFLRTQRFDSSYDTANKYIDSYAD 61
           Y+IL+Y+E+YQKEN+   M I+LC DWNGSK GHVYKFLR+Q F SSYD A++Y DS  D
Sbjct: 235 YKILEYLEAYQKENKLNHMPIILCGDWNGSKRGHVYKFLRSQGFISSYDDAHQYTDS--D 292

Query: 62  LHK*VSHRNPRGNICGVDFICIFNPNQALKPLKTSWAEAVLTII 105
            H+ VSHRN RGNICGVDFI + NP+ + KPL+TSW EAV +II
Sbjct: 293 AHRWVSHRNHRGNICGVDFIWLCNPSDSRKPLRTSWVEAVFSII 336


>UniRef100_Q8GUH8 Hypothetical protein At5g54130 [Arabidopsis thaliana]
          Length = 436

 Score =  142 bits (357), Expect = 2e-33
 Identities = 70/100 (70%), Positives = 78/100 (78%), Gaps = 2/100 (2%)

Query: 2   YQILQYVESYQKENRFKSMSIVLCSDWNGSKLGHVYKFLRTQRFDSSYDTANKYIDSYAD 61
           Y+ILQYVESYQKE     M I+LC DWNGSK GHVYKFLR+Q F SSYDTA++Y DS  D
Sbjct: 187 YKILQYVESYQKEVNLSPMPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTAHRYTDS--D 244

Query: 62  LHK*VSHRNPRGNICGVDFICIFNPNQALKPLKTSWAEAV 101
            HK VSHRN RGNIC VDFI + NPN+  K LKTSW+EAV
Sbjct: 245 AHKWVSHRNHRGNICAVDFIWLLNPNRYRKLLKTSWSEAV 284


>UniRef100_O81916 Hypothetical calcium-binding protein At1g02270 [Arabidopsis
           thaliana]
          Length = 232

 Score =  121 bits (304), Expect = 3e-27
 Identities = 58/86 (67%), Positives = 68/86 (78%), Gaps = 2/86 (2%)

Query: 20  MSIVLCSDWNGSKLGHVYKFLRTQRFDSSYDTANKYIDSYADLHK*VSHRNPRGNICGVD 79
           M I+LC DWNGSK GHVYKFLR+Q F SSYD A++Y DS  D H+ VSHRN RGNICGVD
Sbjct: 1   MPIILCGDWNGSKRGHVYKFLRSQGFISSYDDAHQYTDS--DAHRWVSHRNHRGNICGVD 58

Query: 80  FICIFNPNQALKPLKTSWAEAVLTII 105
           FI + NP+ + KPL+TSW EAV +II
Sbjct: 59  FIWLCNPSDSRKPLRTSWVEAVFSII 84


>UniRef100_Q9LVV7 Gb|AAC24386.1 [Arabidopsis thaliana]
          Length = 232

 Score =  119 bits (298), Expect = 2e-26
 Identities = 58/82 (70%), Positives = 65/82 (78%), Gaps = 2/82 (2%)

Query: 20  MSIVLCSDWNGSKLGHVYKFLRTQRFDSSYDTANKYIDSYADLHK*VSHRNPRGNICGVD 79
           M I+LC DWNGSK GHVYKFLR+Q F SSYDTA++Y DS  D HK VSHRN RGNIC VD
Sbjct: 1   MPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTAHRYTDS--DAHKWVSHRNHRGNICAVD 58

Query: 80  FICIFNPNQALKPLKTSWAEAV 101
           FI + NPN+  K LKTSW+EAV
Sbjct: 59  FIWLLNPNRYRKLLKTSWSEAV 80


>UniRef100_UPI0000364D40 UPI0000364D40 UniRef100 entry
          Length = 359

 Score = 32.0 bits (71), Expect = 3.6
 Identities = 14/45 (31%), Positives = 24/45 (53%)

Query: 4   ILQYVESYQKENRFKSMSIVLCSDWNGSKLGHVYKFLRTQRFDSS 48
           +L  +  + +     S  +VLC D+N + L  +Y+FL T R + S
Sbjct: 162 LLAEISRFSRPPNGSSSPVVLCGDFNSTPLSPLYRFLTTGRLNYS 206


>UniRef100_Q7RS52 Vacuolar-type H+ pumping pyrophosphatase-related [Plasmodium yoelii
           yoelii]
          Length = 1007

 Score = 31.6 bits (70), Expect = 4.7
 Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 13/80 (16%)

Query: 2   YQILQYVESYQKENRFKSMSIVLCSDWNGSKLGHVYKFLRTQRFDSSYDTANKYIDSYAD 61
           Y+I++  E+  K+N+   M        NG        +L+    + SY+T +KY  +Y +
Sbjct: 133 YEIIKDTENMSKKNKLIEMPP------NGM-------YLQCSPNNFSYNTNDKYYKTYEN 179

Query: 62  LHK*VSHRNPRGNICGVDFI 81
            +  +SH N   N+   D+I
Sbjct: 180 CYIKISHENGNNNMSQYDYI 199


  Database: uniref100
    Posted date:  Jan 5, 2005  1:24 AM
  Number of letters in database: 848,049,833
  Number of sequences in database:  2,790,947
  
Lambda     K      H
   0.327    0.139    0.440 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 171,300,093
Number of Sequences: 2790947
Number of extensions: 5838523
Number of successful extensions: 13091
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 13081
Number of HSP's gapped (non-prelim): 7
length of query: 105
length of database: 848,049,833
effective HSP length: 81
effective length of query: 24
effective length of database: 621,983,126
effective search space: 14927595024
effective search space used: 14927595024
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 68 (30.8 bits)


Lotus: description of TM0199.8