BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0185.17
(469 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q69FA4 Gag-pol polyprotein [Phaseolus vulgaris] 304 4e-81
UniRef100_Q6L408 Putative polyprotein [Solanum demissum] 281 3e-74
UniRef100_Q8LSK0 Gag and Pol [Zea mays] 279 1e-73
UniRef100_Q7XML8 OSJNBa0040D17.9 protein [Oryza sativa] 275 2e-72
UniRef100_Q75J10 Putative gag and pol protein [Oryza sativa] 275 3e-72
UniRef100_Q9S7F1 Similar to Oryza australiensis retrotransposon ... 274 5e-72
UniRef100_Q65XF0 Putative polyprotein [Oryza sativa] 274 5e-72
UniRef100_Q84ME8 Putative polyprotein [Oryza sativa] 274 5e-72
UniRef100_Q7XVB4 OSJNBa0072D21.4 protein [Oryza sativa] 274 5e-72
UniRef100_Q7XTI8 OSJNBa0020P07.16 protein [Oryza sativa] 274 5e-72
UniRef100_Q8LJ12 Putative gag and pol [Oryza sativa] 274 5e-72
UniRef100_Q6L5B9 Putative polyprotein [Oryza sativa] 273 6e-72
UniRef100_Q7X7X3 OSJNBb0112E13.7 protein [Oryza sativa] 273 8e-72
UniRef100_Q8RU93 Putative polyprotein from transposon TNT 1-94 [... 273 1e-71
UniRef100_Q8H7V4 Putative polyprotein from transposon TNT [Oryza... 273 1e-71
UniRef100_Q84TW9 Putative polyprotein [Oryza sativa] 272 1e-71
UniRef100_Q7XW90 OSJNBb0043H09.7 protein [Oryza sativa] 272 1e-71
UniRef100_Q7XP54 OSJNBa0013K16.13 protein [Oryza sativa] 272 1e-71
UniRef100_Q84RZ7 Hypothetical polyprotein [Oryza sativa] 272 2e-71
UniRef100_Q75HC1 Putative Integrase core domain containing prote... 272 2e-71
>UniRef100_Q69FA4 Gag-pol polyprotein [Phaseolus vulgaris]
Length = 1290
Score = 304 bits (778), Expect = 4e-81
Identities = 153/298 (51%), Positives = 216/298 (72%)
Query: 147 SGKAVMTCLYVDDMLIFGTDLNEVEKTKSFLSNSFDMKDLGEADVILGIKIIRDGEIIGL 206
+G+ V+ CLYVDDMLIFGT + V KTK FL + F+MKD+GEA VILG+KIIR G+ I L
Sbjct: 956 NGEYVIICLYVDDMLIFGTCNDIVFKTKLFLGSKFEMKDMGEASVILGVKIIRKGDSILL 1015
Query: 207 SQSHYIEKVLKKFDHFDCKSVSTPFDQNTKLQPHKRCPVAQLEYSKAIRCLMYAMTCTRP 266
SQ Y EK+LKKF ++D KSVSTP+D N+KL+ ++ ++Q +Y++ I L++ M+ +RP
Sbjct: 1016 SQEKYTEKLLKKFGYYDFKSVSTPYDANSKLKKNRGESISQTQYAQIIGSLLHLMSFSRP 1075
Query: 267 DIAYVVGRLSRYTCNPSKDHWHVVNRVLKYLNGTINYSLIYNGYPSVLEGYTYASWVTCV 326
DIAY VGRLSR T PS+DHW + R++KYL GT++Y++ Y+G+P+VLEGY+ A+W++
Sbjct: 1076 DIAYAVGRLSRCTQCPSQDHWEALARLMKYLRGTMDYAIEYSGFPAVLEGYSDANWISDS 1135
Query: 327 KDHASTSG*IFNLGGGAVSWGSKKQTCIADSTMAAEFIALAACSKETV*LRNLLYEILIW 386
+ STSG +F LGGGAV+W S +QT IA STM +EF+AL E L+N L I +
Sbjct: 1136 DETKSTSGYVFTLGGGAVTWRSARQTIIARSTMESEFVALEMAGSEAEWLKNFLANIPLG 1195
Query: 387 PKLMRQVSIHCDSQCTLSKAYSQVYNGKSRHIVLRHSHVKDLITNGVISIVFVRTVKE 444
K VS+HCD Q ++ A ++ YNGK+RHI LRH+ VK L+ +G ISI +V++ ++
Sbjct: 1196 MKPTPSVSMHCDCQSAIAIAKNKSYNGKNRHIQLRHNLVKQLLKSGTISIDYVKSERD 1253
>UniRef100_Q6L408 Putative polyprotein [Solanum demissum]
Length = 1415
Score = 281 bits (719), Expect = 3e-74
Identities = 140/291 (48%), Positives = 197/291 (67%)
Query: 151 VMTCLYVDDMLIFGTDLNEVEKTKSFLSNSFDMKDLGEADVILGIKIIRDGEIIGLSQSH 210
V+ LYVDDMLI D++++ TK LS+ F MKDLG ADVILGI+I++ + + LSQSH
Sbjct: 1018 VIVFLYVDDMLIMSKDIDDINATKRMLSSKFAMKDLGVADVILGIRILKTPQGLALSQSH 1077
Query: 211 YIEKVLKKFDHFDCKSVSTPFDQNTKLQPHKRCPVAQLEYSKAIRCLMYAMTCTRPDIAY 270
YIEK+L KF + + V P D + Q + +QLEY++ + LMY M CTRPDI+
Sbjct: 1078 YIEKILDKFKYLNFNVVKIPIDLSCTFQKNVGESDSQLEYARVLGSLMYIMNCTRPDISC 1137
Query: 271 VVGRLSRYTCNPSKDHWHVVNRVLKYLNGTINYSLIYNGYPSVLEGYTYASWVTCVKDHA 330
+ +LSR+T NP++ HW + VL YL + +Y+L YN YP+++EGY+ A+W+T +
Sbjct: 1138 AISKLSRFTSNPNQTHWMAMKHVLGYLKHSQHYALHYNKYPAMIEGYSDANWITGSNEVK 1197
Query: 331 STSG*IFNLGGGAVSWGSKKQTCIADSTMAAEFIALAACSKETV*LRNLLYEILIWPKLM 390
STSG +F LG GAVSW S KQTCIA STM ++FIAL KE L+N L +I WPK +
Sbjct: 1198 STSGYVFTLGRGAVSWKSSKQTCIARSTMESKFIALDKAGKEAEWLQNFLEDIPFWPKPV 1257
Query: 391 RQVSIHCDSQCTLSKAYSQVYNGKSRHIVLRHSHVKDLITNGVISIVFVRT 441
+ IHCDSQ + +A S +YNGKSRHI R + V+ L+++G+I+I +V++
Sbjct: 1258 GPICIHCDSQAAIGRARSVMYNGKSRHIRWRQNTVRQLLSSGIITIDYVKS 1308
>UniRef100_Q8LSK0 Gag and Pol [Zea mays]
Length = 1264
Score = 279 bits (713), Expect = 1e-73
Identities = 142/303 (46%), Positives = 201/303 (65%), Gaps = 1/303 (0%)
Query: 148 GKAVMTCLYVDDMLIFGTDLNEVEKTKSFLSNSFDMKDLGEADVILGIKIIRDGEIIGLS 207
G+ V+ CLYVDD+LIFGT+++ + + KSFLS SFDMKDLGEADVIL IK+I+ I LS
Sbjct: 941 GEGVILCLYVDDILIFGTNIDVINEVKSFLSKSFDMKDLGEADVILNIKLIKADGGITLS 1000
Query: 208 QSHYIEKVLKKFDHFDCKSVSTPFDQNTKLQPHKRCPVAQLEYSKAIRCLMYAMTCTRPD 267
QSHY+EKVLK+F +CK TP+D + L+ +KR + QL YS+ + LMY TRPD
Sbjct: 1001 QSHYVEKVLKRFGFSECKPSPTPYDPSVTLRKNKRIGLDQLRYSQIVGSLMYLAGATRPD 1060
Query: 268 IAYVVGRLSRYTCNPSKDHWHVVNRVLKYLNGTINYSLIYNGYPSVLEGYTYASWVTCVK 327
I++ V +LSR+ NP DHWH + RV++YL GT++Y + Y+G +VLEGY+ ++W++
Sbjct: 1061 ISFAVSKLSRFMSNPGTDHWHALERVMRYLQGTMSYGIHYSGQHAVLEGYSDSNWISDAD 1120
Query: 328 DHASTSG*IFNLGGGAVSWGSKKQTCIADSTMAAEFIALAACSKETV*LRNLLYEILIWP 387
+ +TSG +F +GGGAVSW S KQT + STM AE AL + E LR LL ++ +
Sbjct: 1121 ELYATSGYVFTIGGGAVSWRSCKQTILTRSTMEAELAALDTATVEAEWLRELLMDLPVVE 1180
Query: 388 KLMRQVSIHCDSQCTLSKAYSQVYNGK-SRHIVLRHSHVKDLITNGVISIVFVRTVKESC 446
K + + ++CD+Q ++K S NGK SRH+ R V+ L +GVIS+ ++ T K
Sbjct: 1181 KPIPAILMNCDNQTVIAKVTSSKDNGKSSRHVKRRLKSVRKLRNSGVISVTYISTDKNLA 1240
Query: 447 RSF 449
F
Sbjct: 1241 DPF 1243
>UniRef100_Q7XML8 OSJNBa0040D17.9 protein [Oryza sativa]
Length = 1319
Score = 275 bits (704), Expect = 2e-72
Identities = 143/303 (47%), Positives = 199/303 (65%), Gaps = 1/303 (0%)
Query: 148 GKAVMTCLYVDDMLIFGTDLNEVEKTKSFLSNSFDMKDLGEADVILGIKIIRDGEIIGLS 207
G+ V+ CLYVDD+LIFGT+L + + KSFLS +FDMKDLG ADVIL IK+IR I L
Sbjct: 979 GEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLL 1038
Query: 208 QSHYIEKVLKKFDHFDCKSVSTPFDQNTKLQPHKRCPVAQLEYSKAIRCLMYAMTCTRPD 267
QSHY+EK+L +F + D K TP+D + L+ +KR QLEYS+ I LMY + TRPD
Sbjct: 1039 QSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGSLMYLASATRPD 1098
Query: 268 IAYVVGRLSRYTCNPSKDHWHVVNRVLKYLNGTINYSLIYNGYPSVLEGYTYASWVTCVK 327
I++ V +LSR+T NP DHW V+ RV++YL GT+ L Y GYP+VLEGY+ ++W++ V
Sbjct: 1099 ISFAVSKLSRFTSNPGDDHWRVLERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVD 1158
Query: 328 DHASTSG*IFNLGGGAVSWGSKKQTCIADSTMAAEFIALAACSKETV*LRNLLYEILIWP 387
+ +TSG +F LGGGAVSW S KQT + STM AE AL + E LR+LL ++ +
Sbjct: 1159 EIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVE 1218
Query: 388 KLMRQVSIHCDSQCTLSKAYSQVYNGK-SRHIVLRHSHVKDLITNGVISIVFVRTVKESC 446
K + + ++CD+Q + K S N K SRH+ R V+ L +GVI++ +++T +
Sbjct: 1219 KPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLA 1278
Query: 447 RSF 449
F
Sbjct: 1279 DPF 1281
>UniRef100_Q75J10 Putative gag and pol protein [Oryza sativa]
Length = 1302
Score = 275 bits (702), Expect = 3e-72
Identities = 142/303 (46%), Positives = 198/303 (64%), Gaps = 1/303 (0%)
Query: 148 GKAVMTCLYVDDMLIFGTDLNEVEKTKSFLSNSFDMKDLGEADVILGIKIIRDGEIIGLS 207
G+ V+ CLYVDD+LIFGT+L + + KSFLS +FDMKDLG ADVIL IK+IR I L
Sbjct: 979 GEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLL 1038
Query: 208 QSHYIEKVLKKFDHFDCKSVSTPFDQNTKLQPHKRCPVAQLEYSKAIRCLMYAMTCTRPD 267
QSHY+EK+L +F + D K TP+D + L+ +KR QLEYS+ I LMY + TRPD
Sbjct: 1039 QSHYVEKILNRFGYIDSKPSPTPYDPSLSLRKNKRIARNQLEYSQIIGSLMYLASATRPD 1098
Query: 268 IAYVVGRLSRYTCNPSKDHWHVVNRVLKYLNGTINYSLIYNGYPSVLEGYTYASWVTCVK 327
I++ V +LSR+T NP DHW + RV++YL GT+ L Y GYP+VLEGY+ ++W++ V
Sbjct: 1099 ISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVD 1158
Query: 328 DHASTSG*IFNLGGGAVSWGSKKQTCIADSTMAAEFIALAACSKETV*LRNLLYEILIWP 387
+ +TSG +F LGGGAVSW S KQT + STM AE AL + E LR+LL ++ +
Sbjct: 1159 EIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVE 1218
Query: 388 KLMRQVSIHCDSQCTLSKAYSQVYNGK-SRHIVLRHSHVKDLITNGVISIVFVRTVKESC 446
K + + ++CD+Q + K S N K SRH+ R V+ L +GVI++ +++T +
Sbjct: 1219 KPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLA 1278
Query: 447 RSF 449
F
Sbjct: 1279 DPF 1281
>UniRef100_Q9S7F1 Similar to Oryza australiensis retrotransposon RIRE1 [Oryza sativa]
Length = 1302
Score = 274 bits (700), Expect = 5e-72
Identities = 142/303 (46%), Positives = 198/303 (64%), Gaps = 1/303 (0%)
Query: 148 GKAVMTCLYVDDMLIFGTDLNEVEKTKSFLSNSFDMKDLGEADVILGIKIIRDGEIIGLS 207
G+ V+ CLYVDD+LIFGT+L + + KSFLS +FDMKDLG ADVIL IK+IR I L
Sbjct: 979 GEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLL 1038
Query: 208 QSHYIEKVLKKFDHFDCKSVSTPFDQNTKLQPHKRCPVAQLEYSKAIRCLMYAMTCTRPD 267
QSHY+EK+L +F + D K TP+D + L+ +KR QLEYS+ I LMY + TRPD
Sbjct: 1039 QSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGSLMYLASATRPD 1098
Query: 268 IAYVVGRLSRYTCNPSKDHWHVVNRVLKYLNGTINYSLIYNGYPSVLEGYTYASWVTCVK 327
I++ V +LSR+T NP DHW + RV++YL GT+ L Y GYP+VLEGY+ ++W++ V
Sbjct: 1099 ISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVD 1158
Query: 328 DHASTSG*IFNLGGGAVSWGSKKQTCIADSTMAAEFIALAACSKETV*LRNLLYEILIWP 387
+ +TSG +F LGGGAVSW S KQT + STM AE AL + E LR+LL ++ +
Sbjct: 1159 EIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVE 1218
Query: 388 KLMRQVSIHCDSQCTLSKAYSQVYNGK-SRHIVLRHSHVKDLITNGVISIVFVRTVKESC 446
K + + ++CD+Q + K S N K SRH+ R V+ L +GVI++ +++T +
Sbjct: 1219 KPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLA 1278
Query: 447 RSF 449
F
Sbjct: 1279 DPF 1281
>UniRef100_Q65XF0 Putative polyprotein [Oryza sativa]
Length = 1391
Score = 274 bits (700), Expect = 5e-72
Identities = 142/303 (46%), Positives = 198/303 (64%), Gaps = 1/303 (0%)
Query: 148 GKAVMTCLYVDDMLIFGTDLNEVEKTKSFLSNSFDMKDLGEADVILGIKIIRDGEIIGLS 207
G+ V+ CLYVDD+LIFGT+L + + KSFLS +FDMKDLG ADVIL IK+IR I L
Sbjct: 1068 GEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLL 1127
Query: 208 QSHYIEKVLKKFDHFDCKSVSTPFDQNTKLQPHKRCPVAQLEYSKAIRCLMYAMTCTRPD 267
QSHY+EK+L +F + D K TP+D + L+ +KR QLEYS+ I LMY + TRPD
Sbjct: 1128 QSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGSLMYLASATRPD 1187
Query: 268 IAYVVGRLSRYTCNPSKDHWHVVNRVLKYLNGTINYSLIYNGYPSVLEGYTYASWVTCVK 327
I++ V +LSR+T NP DHW + RV++YL GT+ L Y GYP+VLEGY+ ++W++ V
Sbjct: 1188 ISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVD 1247
Query: 328 DHASTSG*IFNLGGGAVSWGSKKQTCIADSTMAAEFIALAACSKETV*LRNLLYEILIWP 387
+ +TSG +F LGGGAVSW S KQT + STM AE AL + E LR+LL ++ +
Sbjct: 1248 EIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVE 1307
Query: 388 KLMRQVSIHCDSQCTLSKAYSQVYNGK-SRHIVLRHSHVKDLITNGVISIVFVRTVKESC 446
K + + ++CD+Q + K S N K SRH+ R V+ L +GVI++ +++T +
Sbjct: 1308 KPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLA 1367
Query: 447 RSF 449
F
Sbjct: 1368 DPF 1370
>UniRef100_Q84ME8 Putative polyprotein [Oryza sativa]
Length = 1302
Score = 274 bits (700), Expect = 5e-72
Identities = 142/303 (46%), Positives = 198/303 (64%), Gaps = 1/303 (0%)
Query: 148 GKAVMTCLYVDDMLIFGTDLNEVEKTKSFLSNSFDMKDLGEADVILGIKIIRDGEIIGLS 207
G+ V+ CLYVDD+LIFGT+L + + KSFLS +FDMKDLG ADVIL IK+IR I L
Sbjct: 979 GEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLL 1038
Query: 208 QSHYIEKVLKKFDHFDCKSVSTPFDQNTKLQPHKRCPVAQLEYSKAIRCLMYAMTCTRPD 267
QSHY+EK+L +F + D K TP+D + L+ +KR QLEYS+ I LMY + TRPD
Sbjct: 1039 QSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGSLMYLASATRPD 1098
Query: 268 IAYVVGRLSRYTCNPSKDHWHVVNRVLKYLNGTINYSLIYNGYPSVLEGYTYASWVTCVK 327
I++ V +LSR+T NP DHW + RV++YL GT+ L Y GYP+VLEGY+ ++W++ V
Sbjct: 1099 ISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVD 1158
Query: 328 DHASTSG*IFNLGGGAVSWGSKKQTCIADSTMAAEFIALAACSKETV*LRNLLYEILIWP 387
+ +TSG +F LGGGAVSW S KQT + STM AE AL + E LR+LL ++ +
Sbjct: 1159 EIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVE 1218
Query: 388 KLMRQVSIHCDSQCTLSKAYSQVYNGK-SRHIVLRHSHVKDLITNGVISIVFVRTVKESC 446
K + + ++CD+Q + K S N K SRH+ R V+ L +GVI++ +++T +
Sbjct: 1219 KPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLA 1278
Query: 447 RSF 449
F
Sbjct: 1279 DPF 1281
>UniRef100_Q7XVB4 OSJNBa0072D21.4 protein [Oryza sativa]
Length = 1319
Score = 274 bits (700), Expect = 5e-72
Identities = 142/303 (46%), Positives = 198/303 (64%), Gaps = 1/303 (0%)
Query: 148 GKAVMTCLYVDDMLIFGTDLNEVEKTKSFLSNSFDMKDLGEADVILGIKIIRDGEIIGLS 207
G+ V+ CLYVDD+LIFGT+L + + KSFLS +FDMKDLG ADVIL IK+IR I L
Sbjct: 979 GEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLL 1038
Query: 208 QSHYIEKVLKKFDHFDCKSVSTPFDQNTKLQPHKRCPVAQLEYSKAIRCLMYAMTCTRPD 267
QSHY+EK+L +F + D K TP+D + L+ +KR QLEYS+ I LMY + TRPD
Sbjct: 1039 QSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGSLMYLASATRPD 1098
Query: 268 IAYVVGRLSRYTCNPSKDHWHVVNRVLKYLNGTINYSLIYNGYPSVLEGYTYASWVTCVK 327
I++ V +LSR+T NP DHW + RV++YL GT+ L Y GYP+VLEGY+ ++W++ V
Sbjct: 1099 ISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVD 1158
Query: 328 DHASTSG*IFNLGGGAVSWGSKKQTCIADSTMAAEFIALAACSKETV*LRNLLYEILIWP 387
+ +TSG +F LGGGAVSW S KQT + STM AE AL + E LR+LL ++ +
Sbjct: 1159 EIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVE 1218
Query: 388 KLMRQVSIHCDSQCTLSKAYSQVYNGK-SRHIVLRHSHVKDLITNGVISIVFVRTVKESC 446
K + + ++CD+Q + K S N K SRH+ R V+ L +GVI++ +++T +
Sbjct: 1219 KPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLA 1278
Query: 447 RSF 449
F
Sbjct: 1279 DPF 1281
>UniRef100_Q7XTI8 OSJNBa0020P07.16 protein [Oryza sativa]
Length = 1314
Score = 274 bits (700), Expect = 5e-72
Identities = 142/303 (46%), Positives = 198/303 (64%), Gaps = 1/303 (0%)
Query: 148 GKAVMTCLYVDDMLIFGTDLNEVEKTKSFLSNSFDMKDLGEADVILGIKIIRDGEIIGLS 207
G+ V+ CLYVDD+LIFGT+L + + KSFLS +FDMKDLG ADVIL IK+IR I L
Sbjct: 951 GEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLL 1010
Query: 208 QSHYIEKVLKKFDHFDCKSVSTPFDQNTKLQPHKRCPVAQLEYSKAIRCLMYAMTCTRPD 267
QSHY+EK+L +F + D K TP+D + L+ +KR QLEYS+ I LMY + TRPD
Sbjct: 1011 QSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGSLMYLASATRPD 1070
Query: 268 IAYVVGRLSRYTCNPSKDHWHVVNRVLKYLNGTINYSLIYNGYPSVLEGYTYASWVTCVK 327
I++ V +LSR+T NP DHW + RV++YL GT+ L Y GYP+VLEGY+ ++W++ V
Sbjct: 1071 ISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVD 1130
Query: 328 DHASTSG*IFNLGGGAVSWGSKKQTCIADSTMAAEFIALAACSKETV*LRNLLYEILIWP 387
+ +TSG +F LGGGAVSW S KQT + STM AE AL + E LR+LL ++ +
Sbjct: 1131 EIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVE 1190
Query: 388 KLMRQVSIHCDSQCTLSKAYSQVYNGK-SRHIVLRHSHVKDLITNGVISIVFVRTVKESC 446
K + + ++CD+Q + K S N K SRH+ R V+ L +GVI++ +++T +
Sbjct: 1191 KPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLA 1250
Query: 447 RSF 449
F
Sbjct: 1251 DPF 1253
>UniRef100_Q8LJ12 Putative gag and pol [Oryza sativa]
Length = 1302
Score = 274 bits (700), Expect = 5e-72
Identities = 142/303 (46%), Positives = 198/303 (64%), Gaps = 1/303 (0%)
Query: 148 GKAVMTCLYVDDMLIFGTDLNEVEKTKSFLSNSFDMKDLGEADVILGIKIIRDGEIIGLS 207
G+ V+ CLYVDD+LIFGT+L + + KSFLS +FDMKDLG ADVIL IK+IR I L
Sbjct: 979 GEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLL 1038
Query: 208 QSHYIEKVLKKFDHFDCKSVSTPFDQNTKLQPHKRCPVAQLEYSKAIRCLMYAMTCTRPD 267
QSHY+EK+L +F + D K TP+D + L+ +KR QLEYS+ I LMY + TRPD
Sbjct: 1039 QSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGSLMYLASATRPD 1098
Query: 268 IAYVVGRLSRYTCNPSKDHWHVVNRVLKYLNGTINYSLIYNGYPSVLEGYTYASWVTCVK 327
I++ V +LSR+T NP DHW + RV++YL GT+ L Y GYP+VLEGY+ ++W++ V
Sbjct: 1099 ISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVD 1158
Query: 328 DHASTSG*IFNLGGGAVSWGSKKQTCIADSTMAAEFIALAACSKETV*LRNLLYEILIWP 387
+ +TSG +F LGGGAVSW S KQT + STM AE AL + E LR+LL ++ +
Sbjct: 1159 EIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVE 1218
Query: 388 KLMRQVSIHCDSQCTLSKAYSQVYNGK-SRHIVLRHSHVKDLITNGVISIVFVRTVKESC 446
K + + ++CD+Q + K S N K SRH+ R V+ L +GVI++ +++T +
Sbjct: 1219 KPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLA 1278
Query: 447 RSF 449
F
Sbjct: 1279 DPF 1281
>UniRef100_Q6L5B9 Putative polyprotein [Oryza sativa]
Length = 1302
Score = 273 bits (699), Expect = 6e-72
Identities = 142/303 (46%), Positives = 198/303 (64%), Gaps = 1/303 (0%)
Query: 148 GKAVMTCLYVDDMLIFGTDLNEVEKTKSFLSNSFDMKDLGEADVILGIKIIRDGEIIGLS 207
G+ V+ CLYVDD+LIFGT+L + + KSFLS +FDMKDLG ADVIL IK+IR I L
Sbjct: 979 GEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLL 1038
Query: 208 QSHYIEKVLKKFDHFDCKSVSTPFDQNTKLQPHKRCPVAQLEYSKAIRCLMYAMTCTRPD 267
QSHY+EK+L +F + D K TP+D + L+ +KR QLEYS+ I LMY + TRPD
Sbjct: 1039 QSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGSLMYLASATRPD 1098
Query: 268 IAYVVGRLSRYTCNPSKDHWHVVNRVLKYLNGTINYSLIYNGYPSVLEGYTYASWVTCVK 327
I++ V +LSR+T NP DHW + RV++YL GT+ L Y YP+VLEGY+ ++W++ V
Sbjct: 1099 ISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTRYPAVLEGYSDSNWISDVD 1158
Query: 328 DHASTSG*IFNLGGGAVSWGSKKQTCIADSTMAAEFIALAACSKETV*LRNLLYEILIWP 387
+ +TSG +F LGGGAVSW S KQT + STM AE AL + E LR+LL ++ +
Sbjct: 1159 EIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVE 1218
Query: 388 KLMRQVSIHCDSQCTLSKAYSQVYNGK-SRHIVLRHSHVKDLITNGVISIVFVRTVKESC 446
KL+ + ++CD+Q + K S N K SRH+ R V+ L +GVI++ +++T +
Sbjct: 1219 KLVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLA 1278
Query: 447 RSF 449
F
Sbjct: 1279 DPF 1281
>UniRef100_Q7X7X3 OSJNBb0112E13.7 protein [Oryza sativa]
Length = 1342
Score = 273 bits (698), Expect = 8e-72
Identities = 141/303 (46%), Positives = 197/303 (64%), Gaps = 1/303 (0%)
Query: 148 GKAVMTCLYVDDMLIFGTDLNEVEKTKSFLSNSFDMKDLGEADVILGIKIIRDGEIIGLS 207
GK V+ CLYVDD+LIFGT+L + + KSFLS +FDMKDLG ADVIL IK+IR I L
Sbjct: 979 GKGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLL 1038
Query: 208 QSHYIEKVLKKFDHFDCKSVSTPFDQNTKLQPHKRCPVAQLEYSKAIRCLMYAMTCTRPD 267
QSHY+EK+L +F + D K TP+D + L+ + R QLEYS+ I LMY + TRPD
Sbjct: 1039 QSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNNRIARNQLEYSQIIGSLMYLASATRPD 1098
Query: 268 IAYVVGRLSRYTCNPSKDHWHVVNRVLKYLNGTINYSLIYNGYPSVLEGYTYASWVTCVK 327
I++ V +LSR+T NP DHW + R+++YL GT+ L Y GYP+VLEGY+ ++W++ V
Sbjct: 1099 ISFAVSKLSRFTSNPGDDHWRALERIMRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVD 1158
Query: 328 DHASTSG*IFNLGGGAVSWGSKKQTCIADSTMAAEFIALAACSKETV*LRNLLYEILIWP 387
+ +TSG +F LGGGAVSW S KQT + STM AE AL + E LR+LL ++ +
Sbjct: 1159 EIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVE 1218
Query: 388 KLMRQVSIHCDSQCTLSKAYSQVYNGK-SRHIVLRHSHVKDLITNGVISIVFVRTVKESC 446
K + + ++CD+Q + K S N K SRH+ R V+ L +GVI++ +++T +
Sbjct: 1219 KPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLA 1278
Query: 447 RSF 449
F
Sbjct: 1279 DPF 1281
>UniRef100_Q8RU93 Putative polyprotein from transposon TNT 1-94 [Oryza sativa]
Length = 1302
Score = 273 bits (697), Expect = 1e-71
Identities = 140/303 (46%), Positives = 198/303 (65%), Gaps = 1/303 (0%)
Query: 148 GKAVMTCLYVDDMLIFGTDLNEVEKTKSFLSNSFDMKDLGEADVILGIKIIRDGEIIGLS 207
G+ V+ CLYVDD+LIFGT++ + + KSFLS +FDMKDLG ADVIL IK+IR I L
Sbjct: 979 GEGVILCLYVDDILIFGTNIEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLL 1038
Query: 208 QSHYIEKVLKKFDHFDCKSVSTPFDQNTKLQPHKRCPVAQLEYSKAIRCLMYAMTCTRPD 267
QSHY+EK+L +F + D K TP+D + L+ +KR QLEYS+ I LMY + TRPD
Sbjct: 1039 QSHYVEKILNRFGYIDSKPSPTPYDPSLSLRKNKRIARNQLEYSQIIGSLMYLASATRPD 1098
Query: 268 IAYVVGRLSRYTCNPSKDHWHVVNRVLKYLNGTINYSLIYNGYPSVLEGYTYASWVTCVK 327
I++ V +LSR+T NP DHW + RV++YL GT+ L Y GYP+VLEGY+ ++W++ V
Sbjct: 1099 ISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVD 1158
Query: 328 DHASTSG*IFNLGGGAVSWGSKKQTCIADSTMAAEFIALAACSKETV*LRNLLYEILIWP 387
+ +TSG +F LGGGAVSW S KQT + STM AE AL + E LR+LL ++ +
Sbjct: 1159 EIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVE 1218
Query: 388 KLMRQVSIHCDSQCTLSKAYSQVYNGK-SRHIVLRHSHVKDLITNGVISIVFVRTVKESC 446
K + + ++CD+Q + K + N K SRH+ R V+ L +GVI++ +++T +
Sbjct: 1219 KPVPAILMNCDNQTVIVKVNNSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLA 1278
Query: 447 RSF 449
F
Sbjct: 1279 DPF 1281
>UniRef100_Q8H7V4 Putative polyprotein from transposon TNT [Oryza sativa]
Length = 1911
Score = 273 bits (697), Expect = 1e-71
Identities = 140/303 (46%), Positives = 198/303 (65%), Gaps = 1/303 (0%)
Query: 148 GKAVMTCLYVDDMLIFGTDLNEVEKTKSFLSNSFDMKDLGEADVILGIKIIRDGEIIGLS 207
G+ V+ CLYVDD+LIFGT++ + + KSFLS +FDMKDLG ADVIL IK+IR I L
Sbjct: 979 GEGVILCLYVDDILIFGTNIEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLL 1038
Query: 208 QSHYIEKVLKKFDHFDCKSVSTPFDQNTKLQPHKRCPVAQLEYSKAIRCLMYAMTCTRPD 267
QSHY+EK+L +F + D K TP+D + L+ +KR QLEYS+ I LMY + TRPD
Sbjct: 1039 QSHYVEKILNRFGYIDSKPSPTPYDPSLSLRKNKRIARNQLEYSQIIGSLMYLASATRPD 1098
Query: 268 IAYVVGRLSRYTCNPSKDHWHVVNRVLKYLNGTINYSLIYNGYPSVLEGYTYASWVTCVK 327
I++ V +LSR+T NP DHW + RV++YL GT+ L Y GYP+VLEGY+ ++W++ V
Sbjct: 1099 ISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVD 1158
Query: 328 DHASTSG*IFNLGGGAVSWGSKKQTCIADSTMAAEFIALAACSKETV*LRNLLYEILIWP 387
+ +TSG +F LGGGAVSW S KQT + STM AE AL + E LR+LL ++ +
Sbjct: 1159 EIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVE 1218
Query: 388 KLMRQVSIHCDSQCTLSKAYSQVYNGK-SRHIVLRHSHVKDLITNGVISIVFVRTVKESC 446
K + + ++CD+Q + K + N K SRH+ R V+ L +GVI++ +++T +
Sbjct: 1219 KPVPAILMNCDNQTVIVKVNNSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLA 1278
Query: 447 RSF 449
F
Sbjct: 1279 DPF 1281
>UniRef100_Q84TW9 Putative polyprotein [Oryza sativa]
Length = 1224
Score = 272 bits (696), Expect = 1e-71
Identities = 142/303 (46%), Positives = 196/303 (63%), Gaps = 1/303 (0%)
Query: 148 GKAVMTCLYVDDMLIFGTDLNEVEKTKSFLSNSFDMKDLGEADVILGIKIIRDGEIIGLS 207
G+ V+ CLYVDD+LIFGT+L + + KSFLS +FDMKDLG ADVIL IK+IR I L
Sbjct: 901 GEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLL 960
Query: 208 QSHYIEKVLKKFDHFDCKSVSTPFDQNTKLQPHKRCPVAQLEYSKAIRCLMYAMTCTRPD 267
QSHY+EK+L +F + D K TP+D + L +KR QLEYS+ I LMY + TRPD
Sbjct: 961 QSHYVEKILNRFGYIDSKPSPTPYDPSLLLHKNKRIARNQLEYSQIIGSLMYLASATRPD 1020
Query: 268 IAYVVGRLSRYTCNPSKDHWHVVNRVLKYLNGTINYSLIYNGYPSVLEGYTYASWVTCVK 327
I++ V +LSR+T NP DHW + RV++YL GT+ L Y GYP+VLEGY+ ++W++ V
Sbjct: 1021 ISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVD 1080
Query: 328 DHASTSG*IFNLGGGAVSWGSKKQTCIADSTMAAEFIALAACSKETV*LRNLLYEILIWP 387
+TSG +F LGGGAVSW S KQT + STM AE AL + E LR+LL ++ +
Sbjct: 1081 KIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVE 1140
Query: 388 KLMRQVSIHCDSQCTLSKAYSQVYNGK-SRHIVLRHSHVKDLITNGVISIVFVRTVKESC 446
K + + ++CD+Q + K S N K SRH+ R V+ L +GVI++ +++T +
Sbjct: 1141 KPVPAILMNCDNQMVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLA 1200
Query: 447 RSF 449
F
Sbjct: 1201 DPF 1203
>UniRef100_Q7XW90 OSJNBb0043H09.7 protein [Oryza sativa]
Length = 1302
Score = 272 bits (696), Expect = 1e-71
Identities = 141/303 (46%), Positives = 197/303 (64%), Gaps = 1/303 (0%)
Query: 148 GKAVMTCLYVDDMLIFGTDLNEVEKTKSFLSNSFDMKDLGEADVILGIKIIRDGEIIGLS 207
G+ V+ CLYVDD+LIFGT+L + + KSFLS +FDMKDLG ADVIL IK+IR I L
Sbjct: 979 GEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLL 1038
Query: 208 QSHYIEKVLKKFDHFDCKSVSTPFDQNTKLQPHKRCPVAQLEYSKAIRCLMYAMTCTRPD 267
QSHY+EK+L +F + D K TP+D + L+ +KR QLEYS+ I LMY + TRPD
Sbjct: 1039 QSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGSLMYLASATRPD 1098
Query: 268 IAYVVGRLSRYTCNPSKDHWHVVNRVLKYLNGTINYSLIYNGYPSVLEGYTYASWVTCVK 327
I++ V +LSR+T NP DHW + RV++YL GT+ Y GYP+VLEGY+ ++W++ V
Sbjct: 1099 ISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGFHYTGYPAVLEGYSDSNWISDVD 1158
Query: 328 DHASTSG*IFNLGGGAVSWGSKKQTCIADSTMAAEFIALAACSKETV*LRNLLYEILIWP 387
+ +TSG +F LGGGAVSW S KQT + STM AE AL + E LR+LL ++ +
Sbjct: 1159 EIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVE 1218
Query: 388 KLMRQVSIHCDSQCTLSKAYSQVYNGK-SRHIVLRHSHVKDLITNGVISIVFVRTVKESC 446
K + + ++CD+Q + K S N K SRH+ R V+ L +GVI++ +++T +
Sbjct: 1219 KPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLA 1278
Query: 447 RSF 449
F
Sbjct: 1279 DPF 1281
>UniRef100_Q7XP54 OSJNBa0013K16.13 protein [Oryza sativa]
Length = 1264
Score = 272 bits (696), Expect = 1e-71
Identities = 140/303 (46%), Positives = 198/303 (65%), Gaps = 1/303 (0%)
Query: 148 GKAVMTCLYVDDMLIFGTDLNEVEKTKSFLSNSFDMKDLGEADVILGIKIIRDGEIIGLS 207
G+ V+ CLYVDD+LIFGT+L + + KSFLS +FDMKDLG AD+IL IK+IR I L
Sbjct: 941 GEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADIILNIKLIRGENGITLL 1000
Query: 208 QSHYIEKVLKKFDHFDCKSVSTPFDQNTKLQPHKRCPVAQLEYSKAIRCLMYAMTCTRPD 267
QSHY+EK+L +F + D K TP+D + L+ +KR QLEYS+ I LMY + TRPD
Sbjct: 1001 QSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGSLMYLASATRPD 1060
Query: 268 IAYVVGRLSRYTCNPSKDHWHVVNRVLKYLNGTINYSLIYNGYPSVLEGYTYASWVTCVK 327
I++ V +LSR+T NP DHW + RV++YL GT+ + Y GYP+VLEGY+ ++W++ V
Sbjct: 1061 ISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVGLGVHYTGYPAVLEGYSDSNWISDVD 1120
Query: 328 DHASTSG*IFNLGGGAVSWGSKKQTCIADSTMAAEFIALAACSKETV*LRNLLYEILIWP 387
+ +TSG +F LGGGAVSW S KQT + STM AE AL + E LR+LL ++ +
Sbjct: 1121 EIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVE 1180
Query: 388 KLMRQVSIHCDSQCTLSKAYSQVYNGK-SRHIVLRHSHVKDLITNGVISIVFVRTVKESC 446
K + + ++CD+Q + K S N K SRH+ R V+ L +GVI++ +++T +
Sbjct: 1181 KPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLA 1240
Query: 447 RSF 449
F
Sbjct: 1241 DPF 1243
>UniRef100_Q84RZ7 Hypothetical polyprotein [Oryza sativa]
Length = 1268
Score = 272 bits (695), Expect = 2e-71
Identities = 141/304 (46%), Positives = 198/304 (64%), Gaps = 2/304 (0%)
Query: 148 GKAVMTCLYVDDMLIFGTDLNEVEKTKSFLSNSFDMKDLGEADVILGIKIIRDGEI-IGL 206
G+ V+ CLYVDD+LIFGT LN +E+ K FLS SF+MKDLG ADVIL IK++R E I L
Sbjct: 944 GEGVILCLYVDDILIFGTSLNVIEEVKDFLSKSFEMKDLGVADVILNIKLLRGDEGGITL 1003
Query: 207 SQSHYIEKVLKKFDHFDCKSVSTPFDQNTKLQPHKRCPVAQLEYSKAIRCLMYAMTCTRP 266
QSHY++KVL +F + DCK+ TP+D + L+ ++R QL YS+ I LMY + TRP
Sbjct: 1004 VQSHYVDKVLSRFGYSDCKAAPTPYDPSVLLRKNRRIARDQLRYSQIIGSLMYLASATRP 1063
Query: 267 DIAYVVGRLSRYTCNPSKDHWHVVNRVLKYLNGTINYSLIYNGYPSVLEGYTYASWVTCV 326
DI++ V +LS++ NP DHWH + RV++YL GT++Y + Y GYP VLEGY+ ++W++
Sbjct: 1064 DISFAVSKLSQFVSNPGDDHWHALERVMRYLKGTMSYGIHYAGYPKVLEGYSDSNWISDA 1123
Query: 327 KDHASTSG*IFNLGGGAVSWGSKKQTCIADSTMAAEFIALAACSKETV*LRNLLYEILIW 386
+ +TSG +F LGGGAVSW S KQT + STM AE AL + E LR LL ++ +
Sbjct: 1124 DEIKATSGYVFTLGGGAVSWKSCKQTILTRSTMEAELTALDTATVEAEWLRELLMDLPVV 1183
Query: 387 PKLMRQVSIHCDSQCTLSKAYSQVYNGK-SRHIVLRHSHVKDLITNGVISIVFVRTVKES 445
K + + ++CD+Q + K S N K SRH+ R V+ +GVI++ +V+T K
Sbjct: 1184 EKPVPAILMNCDNQTVIIKVNSSKDNMKSSRHVKRRLKSVRKQKNSGVIALDYVQTAKNL 1243
Query: 446 CRSF 449
F
Sbjct: 1244 ADQF 1247
>UniRef100_Q75HC1 Putative Integrase core domain containing protein [Oryza sativa]
Length = 1180
Score = 272 bits (695), Expect = 2e-71
Identities = 142/303 (46%), Positives = 197/303 (64%), Gaps = 1/303 (0%)
Query: 148 GKAVMTCLYVDDMLIFGTDLNEVEKTKSFLSNSFDMKDLGEADVILGIKIIRDGEIIGLS 207
G+ V+ CLYVDD+LIFGT+L + + KSFLS +FDMKDLG ADVIL IK+IR I L
Sbjct: 857 GEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLL 916
Query: 208 QSHYIEKVLKKFDHFDCKSVSTPFDQNTKLQPHKRCPVAQLEYSKAIRCLMYAMTCTRPD 267
QSHY+EK+L +F + D K TP+D + L+ +KR QLEYS+ I LMY + TRPD
Sbjct: 917 QSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIAGNQLEYSQIIGSLMYLASATRPD 976
Query: 268 IAYVVGRLSRYTCNPSKDHWHVVNRVLKYLNGTINYSLIYNGYPSVLEGYTYASWVTCVK 327
I++VV +LSR+T NP DHW + RV+ YL GT+ L Y GYP+VLEGY+ ++W++ V
Sbjct: 977 ISFVVSKLSRFTSNPGDDHWRALERVMCYLKGTVELGLHYTGYPAVLEGYSDSNWISDVD 1036
Query: 328 DHASTSG*IFNLGGGAVSWGSKKQTCIADSTMAAEFIALAACSKETV*LRNLLYEILIWP 387
+ +TSG +F LGGGAVSW S KQT + STM E AL + E LR+LL ++ +
Sbjct: 1037 EIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEVELTALDTATVEAEWLRDLLMDLPVVE 1096
Query: 388 KLMRQVSIHCDSQCTLSKAYSQVYNGK-SRHIVLRHSHVKDLITNGVISIVFVRTVKESC 446
K + + ++CD+Q + K S N K SRH+ R V+ L +GVI++ +++T +
Sbjct: 1097 KPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLA 1156
Query: 447 RSF 449
F
Sbjct: 1157 DPF 1159
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.351 0.154 0.546
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 691,247,674
Number of Sequences: 2790947
Number of extensions: 26302108
Number of successful extensions: 131178
Number of sequences better than 10.0: 783
Number of HSP's better than 10.0 without gapping: 701
Number of HSP's successfully gapped in prelim test: 82
Number of HSP's that attempted gapping in prelim test: 128944
Number of HSP's gapped (non-prelim): 983
length of query: 469
length of database: 848,049,833
effective HSP length: 131
effective length of query: 338
effective length of database: 482,435,776
effective search space: 163063292288
effective search space used: 163063292288
T: 11
A: 40
X1: 14 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 38 (21.9 bits)
S2: 77 (34.3 bits)
Lotus: description of TM0185.17