BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0177.9
(113 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q9BBS7 DNA-directed RNA polymerase beta'' chain [Lotus... 210 7e-54
UniRef100_P12227 DNA-directed RNA polymerase beta'' chain [Pisum... 201 3e-51
UniRef100_Q8HVY3 DNA-directed RNA polymerase beta'' chain [Glyci... 198 3e-50
UniRef100_Q7YJY0 DNA-directed RNA polymerase beta'' chain [Calyc... 198 3e-50
UniRef100_Q8S8Y1 DNA-directed RNA polymerase beta'' chain [Atrop... 196 1e-49
UniRef100_Q6EW58 RNA polymerase beta' subunit-2 [Nymphaea alba] 195 2e-49
UniRef100_P38550 DNA-directed RNA polymerase beta'' chain [Nicot... 195 2e-49
UniRef100_P11704 DNA-directed RNA polymerase beta'' chain [Spina... 193 7e-49
UniRef100_P56764 DNA-directed RNA polymerase beta'' chain [Arabi... 193 7e-49
UniRef100_Q5QA61 RpoC2 [Acorus gramineus] 193 9e-49
UniRef100_Q9MTM3 DNA-directed RNA polymerase beta'' chain [Oenot... 192 1e-48
UniRef100_Q9THV5 DNA-directed RNA polymerase beta'' chain [Sinap... 191 3e-48
UniRef100_Q68S16 RNA polymerase beta II subunit [Panax ginseng] 191 4e-48
UniRef100_Q6QY81 RNA polymerase beta'' chain [Oryza sativa] 190 8e-48
UniRef100_Q6ENI2 RNA polymerase beta' subunit-2 [Oryza nivara] 190 8e-48
UniRef100_Q9XPS9 DNA-directed RNA polymerase beta'' chain [Triti... 190 8e-48
UniRef100_P12093 DNA-directed RNA polymerase beta'' chain [Oryza... 190 8e-48
UniRef100_Q7F9Z9 OSJNBa0079C19.18 protein [Oryza sativa] 188 2e-47
UniRef100_Q7YJ43 RNA polymerase beta'' subunit [Nicotiana sylves... 188 3e-47
UniRef100_Q6ENX1 RNA polymerase beta subunit [Saccharum officina... 187 4e-47
>UniRef100_Q9BBS7 DNA-directed RNA polymerase beta'' chain [Lotus japonicus]
Length = 1332
Score = 210 bits (534), Expect = 7e-54
Identities = 110/113 (97%), Positives = 112/113 (98%)
Query: 1 AQSRISLVNKIQRVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFSLGELIGLLRA 60
AQSRISLVNKIQRVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFS GELIGLLRA
Sbjct: 1172 AQSRISLVNKIQRVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRA 1231
Query: 61 QRTGRALEESICYRTILLGITKTSMNTQSFISEASFQETARVLAKAALRGRID 113
QRTGRALEESICYRT+LLGITKTS+NTQSFISEASFQETARVLAKAALRGRID
Sbjct: 1232 QRTGRALEESICYRTLLLGITKTSLNTQSFISEASFQETARVLAKAALRGRID 1284
>UniRef100_P12227 DNA-directed RNA polymerase beta'' chain [Pisum sativum]
Length = 1163
Score = 201 bits (512), Expect = 3e-51
Identities = 103/113 (91%), Positives = 110/113 (97%)
Query: 1 AQSRISLVNKIQRVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFSLGELIGLLRA 60
AQSRISLVNKIQ+VYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSN+F GELIGLLRA
Sbjct: 984 AQSRISLVNKIQKVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNIFLPGELIGLLRA 1043
Query: 61 QRTGRALEESICYRTILLGITKTSMNTQSFISEASFQETARVLAKAALRGRID 113
+RTGRALEE+ICYR +LLG+TKTS+NTQSFISEASFQETARVLAKAALRGRID
Sbjct: 1044 ERTGRALEEAICYRALLLGVTKTSLNTQSFISEASFQETARVLAKAALRGRID 1096
>UniRef100_Q8HVY3 DNA-directed RNA polymerase beta'' chain [Glycine max]
Length = 1384
Score = 198 bits (503), Expect = 3e-50
Identities = 102/113 (90%), Positives = 109/113 (96%)
Query: 1 AQSRISLVNKIQRVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFSLGELIGLLRA 60
AQSRISLVNKIQ+VYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVF GELIGLLRA
Sbjct: 1200 AQSRISLVNKIQKVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRA 1259
Query: 61 QRTGRALEESICYRTILLGITKTSMNTQSFISEASFQETARVLAKAALRGRID 113
+R GR+LEE+ICYR +LLGITKTS+NTQSFISEASFQETARVL+KAALRGRID
Sbjct: 1260 ERAGRSLEEAICYRVLLLGITKTSLNTQSFISEASFQETARVLSKAALRGRID 1312
>UniRef100_Q7YJY0 DNA-directed RNA polymerase beta'' chain [Calycanthus fertilis var.
ferax]
Length = 1377
Score = 198 bits (503), Expect = 3e-50
Identities = 103/113 (91%), Positives = 109/113 (96%)
Query: 1 AQSRISLVNKIQRVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFSLGELIGLLRA 60
AQSRISLVNKIQ+VYRSQGV IHNRHIEIIVRQITS+VLVSEDGMSNVFS GELIGLLRA
Sbjct: 1193 AQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQITSRVLVSEDGMSNVFSPGELIGLLRA 1252
Query: 61 QRTGRALEESICYRTILLGITKTSMNTQSFISEASFQETARVLAKAALRGRID 113
+RTGRALEE+ICYR ILLGIT+ S+NTQSFISEASFQETARVLAKAALRGRID
Sbjct: 1253 ERTGRALEEAICYRAILLGITRASLNTQSFISEASFQETARVLAKAALRGRID 1305
>UniRef100_Q8S8Y1 DNA-directed RNA polymerase beta'' chain [Atropa belladonna]
Length = 1389
Score = 196 bits (498), Expect = 1e-49
Identities = 102/113 (90%), Positives = 108/113 (95%)
Query: 1 AQSRISLVNKIQRVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFSLGELIGLLRA 60
AQSRISLVNKIQ+VYRSQGV IHNRHIEIIVRQITSKVLVSEDGMSNVFS GELIGLLRA
Sbjct: 1196 AQSRISLVNKIQQVYRSQGVQIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRA 1255
Query: 61 QRTGRALEESICYRTILLGITKTSMNTQSFISEASFQETARVLAKAALRGRID 113
+R GRALEE+ICYR +LLGIT+ S+NTQSFISEASFQETARVLAKAALRGRID
Sbjct: 1256 ERMGRALEEAICYRVVLLGITRASLNTQSFISEASFQETARVLAKAALRGRID 1308
>UniRef100_Q6EW58 RNA polymerase beta' subunit-2 [Nymphaea alba]
Length = 1401
Score = 195 bits (496), Expect = 2e-49
Identities = 100/113 (88%), Positives = 108/113 (95%)
Query: 1 AQSRISLVNKIQRVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFSLGELIGLLRA 60
AQSR+SLVNKIQ+VYRSQGV IHN+HIEIIVRQITSKVLVSEDGMSNVFS GELIGLLRA
Sbjct: 1195 AQSRVSLVNKIQKVYRSQGVQIHNKHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRA 1254
Query: 61 QRTGRALEESICYRTILLGITKTSMNTQSFISEASFQETARVLAKAALRGRID 113
+R GRALEE+ICYR +LLGIT+ S+NTQSFISEASFQETARVLAKAALRGRID
Sbjct: 1255 ERAGRALEEAICYRAVLLGITRASLNTQSFISEASFQETARVLAKAALRGRID 1307
>UniRef100_P38550 DNA-directed RNA polymerase beta'' chain [Nicotiana tabacum]
Length = 1388
Score = 195 bits (496), Expect = 2e-49
Identities = 101/113 (89%), Positives = 108/113 (95%)
Query: 1 AQSRISLVNKIQRVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFSLGELIGLLRA 60
AQSRISLVNKIQ+VYRSQGV IHNRH+EIIVRQITSKVLVSEDGMSNVFS GELIGLLRA
Sbjct: 1195 AQSRISLVNKIQQVYRSQGVQIHNRHLEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRA 1254
Query: 61 QRTGRALEESICYRTILLGITKTSMNTQSFISEASFQETARVLAKAALRGRID 113
+R GRALEE+ICYR +LLGIT+ S+NTQSFISEASFQETARVLAKAALRGRID
Sbjct: 1255 ERMGRALEEAICYRVVLLGITRASLNTQSFISEASFQETARVLAKAALRGRID 1307
>UniRef100_P11704 DNA-directed RNA polymerase beta'' chain [Spinacia oleracea]
Length = 1361
Score = 193 bits (491), Expect = 7e-49
Identities = 101/113 (89%), Positives = 106/113 (93%)
Query: 1 AQSRISLVNKIQRVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFSLGELIGLLRA 60
AQSRISLVNKIQ+VYRSQGV IHNRHIEIIVRQITSKVLVSEDGMSNVF GELIGL RA
Sbjct: 1183 AQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLFRA 1242
Query: 61 QRTGRALEESICYRTILLGITKTSMNTQSFISEASFQETARVLAKAALRGRID 113
+RTGRALEE+ICYR LLGIT+ S+NTQSFISEASFQETARVLAKAALRGRID
Sbjct: 1243 ERTGRALEEAICYRATLLGITRASLNTQSFISEASFQETARVLAKAALRGRID 1295
>UniRef100_P56764 DNA-directed RNA polymerase beta'' chain [Arabidopsis thaliana]
Length = 1376
Score = 193 bits (491), Expect = 7e-49
Identities = 100/112 (89%), Positives = 107/112 (95%)
Query: 2 QSRISLVNKIQRVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFSLGELIGLLRAQ 61
QSRISLVNKIQ+VYRSQGV IHNRHIEIIVRQITSKVLVSE+GMSNVF GELIGLLRA+
Sbjct: 1191 QSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQITSKVLVSEEGMSNVFLPGELIGLLRAE 1250
Query: 62 RTGRALEESICYRTILLGITKTSMNTQSFISEASFQETARVLAKAALRGRID 113
RTGRALEE+ICYR +LLGIT+ S+NTQSFISEASFQETARVLAKAALRGRID
Sbjct: 1251 RTGRALEEAICYRAVLLGITRASLNTQSFISEASFQETARVLAKAALRGRID 1302
>UniRef100_Q5QA61 RpoC2 [Acorus gramineus]
Length = 602
Score = 193 bits (490), Expect = 9e-49
Identities = 101/113 (89%), Positives = 108/113 (95%)
Query: 1 AQSRISLVNKIQRVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFSLGELIGLLRA 60
AQSRISLVNKIQ+VYRSQGV IHN+HIEIIVRQITSKVLVSEDGMSNVFS GELIGLLRA
Sbjct: 408 AQSRISLVNKIQKVYRSQGVQIHNKHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRA 467
Query: 61 QRTGRALEESICYRTILLGITKTSMNTQSFISEASFQETARVLAKAALRGRID 113
+RTGRALEE+I YR ILLGIT+ S+NTQSFISEASFQETARVLAKAALRGR+D
Sbjct: 468 ERTGRALEEAIRYRAILLGITRASLNTQSFISEASFQETARVLAKAALRGRVD 520
>UniRef100_Q9MTM3 DNA-directed RNA polymerase beta'' chain [Oenothera hookeri]
Length = 1386
Score = 192 bits (489), Expect = 1e-48
Identities = 101/112 (90%), Positives = 106/112 (94%)
Query: 2 QSRISLVNKIQRVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFSLGELIGLLRAQ 61
QSRISLVNKIQ+VYRSQGV IHNRHIEIIVRQITSKVLVSEDGMSNVF ELIGLLRA+
Sbjct: 1195 QSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQITSKVLVSEDGMSNVFLPRELIGLLRAE 1254
Query: 62 RTGRALEESICYRTILLGITKTSMNTQSFISEASFQETARVLAKAALRGRID 113
RTGRALEESICY+ LLGIT+TS+NTQSFISEASFQETARVLAKAALRGRID
Sbjct: 1255 RTGRALEESICYKAFLLGITRTSLNTQSFISEASFQETARVLAKAALRGRID 1306
>UniRef100_Q9THV5 DNA-directed RNA polymerase beta'' chain [Sinapis alba]
Length = 1384
Score = 191 bits (486), Expect = 3e-48
Identities = 99/112 (88%), Positives = 107/112 (95%)
Query: 2 QSRISLVNKIQRVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFSLGELIGLLRAQ 61
QSRISLVNKI++VYRSQGV IHNRHIEIIVRQITSKVLVSE+GMSNVF GELIGLLRA+
Sbjct: 1199 QSRISLVNKIKQVYRSQGVQIHNRHIEIIVRQITSKVLVSEEGMSNVFLPGELIGLLRAE 1258
Query: 62 RTGRALEESICYRTILLGITKTSMNTQSFISEASFQETARVLAKAALRGRID 113
RTGRALEE+ICYR +LLGIT+ S+NTQSFISEASFQETARVLAKAALRGRID
Sbjct: 1259 RTGRALEEAICYRAVLLGITRASLNTQSFISEASFQETARVLAKAALRGRID 1310
>UniRef100_Q68S16 RNA polymerase beta II subunit [Panax ginseng]
Length = 1387
Score = 191 bits (484), Expect = 4e-48
Identities = 99/112 (88%), Positives = 105/112 (93%)
Query: 2 QSRISLVNKIQRVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFSLGELIGLLRAQ 61
QSRISLVNKIQ+VYRSQGV IHNRHIEIIVRQITSKVLVSEDGMSNVF GE IGLLRA+
Sbjct: 1195 QSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQITSKVLVSEDGMSNVFLPGEFIGLLRAE 1254
Query: 62 RTGRALEESICYRTILLGITKTSMNTQSFISEASFQETARVLAKAALRGRID 113
R GRALEE+ICY+ +LLGITK S+NTQSFISEASFQETARVLAKAALRGRID
Sbjct: 1255 RMGRALEEAICYQAVLLGITKASLNTQSFISEASFQETARVLAKAALRGRID 1306
>UniRef100_Q6QY81 RNA polymerase beta'' chain [Oryza sativa]
Length = 1513
Score = 190 bits (482), Expect = 8e-48
Identities = 99/113 (87%), Positives = 106/113 (93%)
Query: 1 AQSRISLVNKIQRVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFSLGELIGLLRA 60
AQSRISLVNKIQ+VYRSQGV IHNRHIEII+RQ+TSKV VSEDGMSNVFS GELIGLLRA
Sbjct: 1320 AQSRISLVNKIQKVYRSQGVQIHNRHIEIIIRQVTSKVRVSEDGMSNVFSPGELIGLLRA 1379
Query: 61 QRTGRALEESICYRTILLGITKTSMNTQSFISEASFQETARVLAKAALRGRID 113
+R GRAL+ESI YR ILLGIT+ S+NTQSFISEASFQETARVLAKAALRGRID
Sbjct: 1380 ERAGRALDESIYYRAILLGITRVSLNTQSFISEASFQETARVLAKAALRGRID 1432
>UniRef100_Q6ENI2 RNA polymerase beta' subunit-2 [Oryza nivara]
Length = 1513
Score = 190 bits (482), Expect = 8e-48
Identities = 99/113 (87%), Positives = 106/113 (93%)
Query: 1 AQSRISLVNKIQRVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFSLGELIGLLRA 60
AQSRISLVNKIQ+VYRSQGV IHNRHIEII+RQ+TSKV VSEDGMSNVFS GELIGLLRA
Sbjct: 1320 AQSRISLVNKIQKVYRSQGVQIHNRHIEIIIRQVTSKVRVSEDGMSNVFSPGELIGLLRA 1379
Query: 61 QRTGRALEESICYRTILLGITKTSMNTQSFISEASFQETARVLAKAALRGRID 113
+R GRAL+ESI YR ILLGIT+ S+NTQSFISEASFQETARVLAKAALRGRID
Sbjct: 1380 ERAGRALDESIYYRAILLGITRVSLNTQSFISEASFQETARVLAKAALRGRID 1432
>UniRef100_Q9XPS9 DNA-directed RNA polymerase beta'' chain [Triticum aestivum]
Length = 1479
Score = 190 bits (482), Expect = 8e-48
Identities = 99/113 (87%), Positives = 106/113 (93%)
Query: 1 AQSRISLVNKIQRVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFSLGELIGLLRA 60
AQSRISLVNKIQ+VYRSQGV IHNRHIEII+RQ+TSKV VSEDGMSNVFS GELIGLLRA
Sbjct: 1295 AQSRISLVNKIQKVYRSQGVQIHNRHIEIIIRQVTSKVRVSEDGMSNVFSPGELIGLLRA 1354
Query: 61 QRTGRALEESICYRTILLGITKTSMNTQSFISEASFQETARVLAKAALRGRID 113
+R GRAL+ESI YR ILLGIT+ S+NTQSFISEASFQETARVLAKAALRGRID
Sbjct: 1355 ERAGRALDESIYYRAILLGITRASLNTQSFISEASFQETARVLAKAALRGRID 1407
>UniRef100_P12093 DNA-directed RNA polymerase beta'' chain [Oryza sativa]
Length = 1513
Score = 190 bits (482), Expect = 8e-48
Identities = 99/113 (87%), Positives = 106/113 (93%)
Query: 1 AQSRISLVNKIQRVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFSLGELIGLLRA 60
AQSRISLVNKIQ+VYRSQGV IHNRHIEII+RQ+TSKV VSEDGMSNVFS GELIGLLRA
Sbjct: 1320 AQSRISLVNKIQKVYRSQGVQIHNRHIEIIIRQVTSKVRVSEDGMSNVFSPGELIGLLRA 1379
Query: 61 QRTGRALEESICYRTILLGITKTSMNTQSFISEASFQETARVLAKAALRGRID 113
+R GRAL+ESI YR ILLGIT+ S+NTQSFISEASFQETARVLAKAALRGRID
Sbjct: 1380 ERAGRALDESIYYRAILLGITRVSLNTQSFISEASFQETARVLAKAALRGRID 1432
>UniRef100_Q7F9Z9 OSJNBa0079C19.18 protein [Oryza sativa]
Length = 1513
Score = 188 bits (478), Expect = 2e-47
Identities = 98/113 (86%), Positives = 106/113 (93%)
Query: 1 AQSRISLVNKIQRVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFSLGELIGLLRA 60
AQSRISLVNKIQ+VY+SQGV IHNRHIEII+RQ+TSKV VSEDGMSNVFS GELIGLLRA
Sbjct: 1320 AQSRISLVNKIQKVYQSQGVQIHNRHIEIIIRQVTSKVRVSEDGMSNVFSPGELIGLLRA 1379
Query: 61 QRTGRALEESICYRTILLGITKTSMNTQSFISEASFQETARVLAKAALRGRID 113
+R GRAL+ESI YR ILLGIT+ S+NTQSFISEASFQETARVLAKAALRGRID
Sbjct: 1380 ERAGRALDESIYYRAILLGITRVSLNTQSFISEASFQETARVLAKAALRGRID 1432
>UniRef100_Q7YJ43 RNA polymerase beta'' subunit [Nicotiana sylvestris]
Length = 112
Score = 188 bits (477), Expect = 3e-47
Identities = 97/110 (88%), Positives = 104/110 (94%)
Query: 4 RISLVNKIQRVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFSLGELIGLLRAQRT 63
RISLVNKIQ+VYRSQGV IHNRH+EIIVRQITSKVLVSEDGMSNVF GELIGLLRA+R
Sbjct: 1 RISLVNKIQQVYRSQGVQIHNRHLEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERM 60
Query: 64 GRALEESICYRTILLGITKTSMNTQSFISEASFQETARVLAKAALRGRID 113
GRALEE+ICYR +LLGIT+ S+NTQSFISEASFQETARVLAKAALRGRID
Sbjct: 61 GRALEEAICYRVVLLGITRASLNTQSFISEASFQETARVLAKAALRGRID 110
>UniRef100_Q6ENX1 RNA polymerase beta subunit [Saccharum officinarum]
Length = 1534
Score = 187 bits (476), Expect = 4e-47
Identities = 98/113 (86%), Positives = 105/113 (92%)
Query: 1 AQSRISLVNKIQRVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFSLGELIGLLRA 60
AQSRISLVNKIQ+VYRSQGV IHNRHIEII+RQ+TSKV VSEDGMSNVF GELIGLLRA
Sbjct: 1339 AQSRISLVNKIQKVYRSQGVQIHNRHIEIIIRQVTSKVRVSEDGMSNVFLPGELIGLLRA 1398
Query: 61 QRTGRALEESICYRTILLGITKTSMNTQSFISEASFQETARVLAKAALRGRID 113
+R GRAL+ESI YR ILLGIT+ S+NTQSFISEASFQETARVLAKAALRGRID
Sbjct: 1399 ERAGRALDESIYYRAILLGITRASLNTQSFISEASFQETARVLAKAALRGRID 1451
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.322 0.134 0.352
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 135,155,683
Number of Sequences: 2790947
Number of extensions: 4246977
Number of successful extensions: 11636
Number of sequences better than 10.0: 733
Number of HSP's better than 10.0 without gapping: 728
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 10343
Number of HSP's gapped (non-prelim): 802
length of query: 113
length of database: 848,049,833
effective HSP length: 89
effective length of query: 24
effective length of database: 599,655,550
effective search space: 14391733200
effective search space used: 14391733200
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 68 (30.8 bits)
Lotus: description of TM0177.9