BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0175.11
         (923 letters)

Database: uniref100 
           2,790,947 sequences; 848,049,833 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

UniRef100_P35100 ATP-dependent Clp protease ATP-binding subunit ...  1582  0.0
UniRef100_P31542 ATP-dependent Clp protease ATP-binding subunit ...  1525  0.0
UniRef100_P31541 ATP-dependent Clp protease ATP-binding subunit ...  1515  0.0
UniRef100_Q9FI56 ATP-dependent Clp protease, ATP-binding subunit...  1511  0.0
UniRef100_Q7F9I1 OSJNBa0039C07.4 protein [Oryza sativa]              1497  0.0
UniRef100_O48931 ClpC [Arabidopsis thaliana]                         1494  0.0
UniRef100_Q9SXJ7 AtClpC [Arabidopsis thaliana]                       1470  0.0
UniRef100_Q9M2Z6 AtClpC [Arabidopsis thaliana]                       1469  0.0
UniRef100_O98447 ClpC protease [Spinacia oleracea]                   1431  0.0
UniRef100_P46523 ATP-dependent Clp protease ATP-binding subunit ...  1415  0.0
UniRef100_Q8DM17 ATP-dependent Clp protease regulatory subunit [...  1251  0.0
UniRef100_Q55023 ClpC [Synechococcus sp]                             1247  0.0
UniRef100_Q8YST5 Endopeptidase Clp ATP-binding chain [Anabaena sp.]  1244  0.0
UniRef100_Q55662 ATP-dependent Clp protease regulatory subunit [...  1238  0.0
UniRef100_UPI000026139F UPI000026139F UniRef100 entry                1223  0.0
UniRef100_Q7U7P3 Endopeptidase Clp ATP-binding chain C [Synechoc...  1221  0.0
UniRef100_UPI00002D70CD UPI00002D70CD UniRef100 entry                1221  0.0
UniRef100_UPI000025FE2C UPI000025FE2C UniRef100 entry                1219  0.0
UniRef100_UPI000033BB5B UPI000033BB5B UniRef100 entry                1219  0.0
UniRef100_O78410 ATP-dependent Clp protease ATP-binding subunit ...  1219  0.0

>UniRef100_P35100 ATP-dependent Clp protease ATP-binding subunit clpA homolog,
           chloroplast precursor [Pisum sativum]
          Length = 922

 Score = 1582 bits (4095), Expect = 0.0
 Identities = 809/923 (87%), Positives = 865/923 (93%), Gaps = 1/923 (0%)

Query: 1   MSRVLAQSITIPGLVCGRSHGHNNRSTMSRRSLKMMSTLQAPALRMSGFSGLRTYNNLDT 60
           M+RVLAQS+++PGLV G     +  S  S+RS+K M  L+   LRMSGFSGLRT+N+L+T
Sbjct: 1   MARVLAQSLSVPGLVAGHKDSQHKGSGKSKRSVKTMCALRTSGLRMSGFSGLRTFNHLNT 60

Query: 61  MLRPGLDFRSKVFGVTTSRKARASRCIPKAMFERFTEKAIKVIMLSQEEARRLGHNFVGT 120
           M+RPGLDF SKV    +SR+ARA R IP+AMFERFTEKAIKVIML+QEEARRLGHNFVGT
Sbjct: 61  MMRPGLDFHSKVSKAVSSRRARAKRFIPRAMFERFTEKAIKVIMLAQEEARRLGHNFVGT 120

Query: 121 EQILLGLVGEGTGIAARVLKAMGISLKDARVEVEKTIGRGSGFVAVEIPFTPRAKRVLEL 180
           EQILLGL+GEGTGIAA+VLK+MGI+LKDARVEVEK IGRGSGFVAVEIPFTPRAKRVLEL
Sbjct: 121 EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL 180

Query: 181 SLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLQDLGADPNNIRAQVIRMVGESNNETA 240
           S EEARQLGHNYIGSEHLLLGLLREGEGVAARVL++LGADP NIR QVIRMVGES +   
Sbjct: 181 SQEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPTNIRTQVIRMVGESADSVT 240

Query: 241 GVAVGRGGSSNKMPTLEEYGTNLTKLANEGKLDPVVGRQQQIERVIQILGRRTKNNPCLV 300
              VG G S+NK PTLEEYGTNLTKLA EGKLDPVVGRQ QIERV QILGRRTKNNPCL+
Sbjct: 241 AT-VGSGSSNNKTPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLI 299

Query: 301 GEPGVGKTAIAEGLAQRIATGDVPETIEGKEVITLDMGLLVAGTKYRGEFEERLKKLMEE 360
           GEPGVGKTAIAEGLAQRIA GDVPETIEGK+VITLDMGLLVAGTKYRGEFEERLKKLMEE
Sbjct: 300 GEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEE 359

Query: 361 IKQNDNIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKD 420
           IKQ+D+IILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKD
Sbjct: 360 IKQSDDIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKD 419

Query: 421 PALERRFQPVRVPEPTVDESIQILRGLRERYERHHKLSYTDDALVAASQLSHQYISDRFL 480
           P LERRFQPV+VPEPTVDE+IQIL+GLRERYE HHKL YTD+AL+AA+QLS+QYISDRFL
Sbjct: 420 PDLERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDEALIAAAQLSYQYISDRFL 479

Query: 481 PDKAIDLIDEAGSRVRLRHAQLPEEARELDKEVRQIVKEKDEAVRNQDFEKAGELRDREM 540
           PDKAIDL+DEAGSRVRL+HAQLPEEA+ELDKEVR+IVKEK+E VRNQDFEKAGELRD+EM
Sbjct: 480 PDKAIDLVDEAGSRVRLQHAQLPEEAKELDKEVRKIVKEKEEYVRNQDFEKAGELRDKEM 539

Query: 541 DLKTQISALIEKGKEMSKAESEADGAGPVVTEVDIQHIVASWTGVPVDKVSSDESDRLLK 600
           DLK QISALIEKGKEMSKAE+E    GP+VTEVDIQHIV+SWTG+PVDKVS+DESDRLLK
Sbjct: 540 DLKAQISALIEKGKEMSKAETETADEGPIVTEVDIQHIVSSWTGIPVDKVSADESDRLLK 599

Query: 601 MEETLHKRVIGQDEAVKAICRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKTLASY 660
           ME+TLHKR+IGQDEAV+AI RAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK LA+Y
Sbjct: 600 MEDTLHKRIIGQDEAVQAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAY 659

Query: 661 YFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEK 720
           YFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEK
Sbjct: 660 YFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEK 719

Query: 721 AHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRKIGFDLDYDEK 780
           AHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR+IGFDLDYDEK
Sbjct: 720 AHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEK 779

Query: 781 DSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKE 840
           DSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVF RLKTKE
Sbjct: 780 DSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFQRLKTKE 839

Query: 841 IDLSVTERFRDRVVEEGYDPSYGARPLRRAIMRLLEDSMAEKMLAGEIKEGDSVIIDADS 900
           I+L VTERFRDRVV+EGY+PSYGARPLRRAIMRLLEDSMAEKMLA EIKEGDSVI+D DS
Sbjct: 840 IELQVTERFRDRVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 899

Query: 901 DGKVIVLNGSSGAPESLPEALPV 923
           DGKVIVLNGSSG PESLPEAL +
Sbjct: 900 DGKVIVLNGSSGTPESLPEALSI 922


>UniRef100_P31542 ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B,
           chloroplast precursor [Lycopersicon esculentum]
          Length = 923

 Score = 1525 bits (3948), Expect = 0.0
 Identities = 787/924 (85%), Positives = 844/924 (91%), Gaps = 2/924 (0%)

Query: 1   MSRVLAQSITIPGLVCGRSHGHNNRSTMSRRSLKMMSTLQAPALRMSGFSGLRTYNNLDT 60
           M+R L QS +IP  V G      N S  ++R++ M+   Q+ +L +  F+GLR  N +DT
Sbjct: 1   MARALVQSTSIPSSVAGERTTKFNGSGKTKRAVTMLCNAQSSSLTLRDFTGLRGCNAIDT 60

Query: 61  MLRPGLDFRSKVFGVTTSRKARASRCIPKAMFERFTEKAIKVIMLSQEEARRLGHNFVGT 120
           ++R G   +SKV   T  R+ R  R +PKAMFERFTEKAIKVIML+QEEARRLGHNFVGT
Sbjct: 61  LVRSGETLQSKVAAATYVRRPRGCRFVPKAMFERFTEKAIKVIMLAQEEARRLGHNFVGT 120

Query: 121 EQILLGLVGEGTGIAARVLKAMGISLKDARVEVEKTIGRGSGFVAVEIPFTPRAKRVLEL 180
           EQILLGL+GEGTGIAA+VLK+MGI+LKDARVEVEK IGRGSGFVAVEIPFTPRAKRVLEL
Sbjct: 121 EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL 180

Query: 181 SLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLQDLGADPNNIRAQVIRMVGESNNETA 240
           SLEEARQLGHNYIGSEHLLLGLLREGEGVAARVL++LGADP+NIR QVIRMVGESN E  
Sbjct: 181 SLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGESN-EAV 239

Query: 241 GVAVGRGGSSNKMPTLEEYGTNLTKLANEGKLDPVVGRQQQIERVIQILGRRTKNNPCLV 300
           G +VG G S  KMPTLEEYGTNLTKLA EGKLDPVVGRQ QIERV QILGRRTKNNPCL+
Sbjct: 240 GASVGGGTSGQKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLI 299

Query: 301 GEPGVGKTAIAEGLAQRIATGDVPETIEGKEVITLDMGLLVAGTKYRGEFEERLKKLMEE 360
           GEPGVGKTAIAEGLAQRIA GDVPETIEGK+VITLDMGLLVAGTKYRGEFEERLKKLMEE
Sbjct: 300 GEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEE 359

Query: 361 IKQNDNIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKD 420
           IKQ+D IILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKD
Sbjct: 360 IKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKD 419

Query: 421 PALERRFQPVRVPEPTVDESIQILRGLRERYERHHKLSYTDDALVAASQLSHQYISDRFL 480
           PALERRFQPV+VPEPTVDE+IQIL+GLRERYE HHKL YTD+ LVAA+QLS+QYISDRFL
Sbjct: 420 PALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDEDLVAAAQLSYQYISDRFL 479

Query: 481 PDKAIDLIDEAGSRVRLRHAQLPEEARELDKEVRQIVKEKDEAVRNQDFEKAGELRDREM 540
           PDKAIDLIDEAGSRVRLRHAQLPEEA+EL+KE+RQI KEK+EAVR QDFEKAGELRDREM
Sbjct: 480 PDKAIDLIDEAGSRVRLRHAQLPEEAKELEKELRQITKEKNEAVRGQDFEKAGELRDREM 539

Query: 541 DLKTQISALIEKGKEMSKAESEADGAGPVVTEVDIQHIVASWTGVPVDKVSSDESDRLLK 600
           DLK QI+ALI+K KE+SKAESEA   GP+VTE DIQHIV+SWTG+PV+KVS+DESDRLLK
Sbjct: 540 DLKAQITALIDKNKEVSKAESEAADTGPLVTEADIQHIVSSWTGIPVEKVSTDESDRLLK 599

Query: 601 MEETLHKRVIGQDEAVKAICRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKTLASY 660
           MEETLH R+IGQDEAVKAI RAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK LA+Y
Sbjct: 600 MEETLHTRIIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAY 659

Query: 661 YFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEK 720
           YFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEK
Sbjct: 660 YFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEK 719

Query: 721 AHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRKIGFDLDYDEK 780
           AHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR+IGFDLD DEK
Sbjct: 720 AHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDLDEK 779

Query: 781 DSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKE 840
           DSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVF+RLK KE
Sbjct: 780 DSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFERLKVKE 839

Query: 841 IDLSVTERFRDRVVEEGYDPSYGARPLRRAIMRLLEDSMAEKMLAGEIKEGDSVIIDADS 900
           I+L VTERFRDRVV+EGY+PSYGARPLRRAIMRLLEDSMAEKMLA EIKEGDSVI+D DS
Sbjct: 840 IELQVTERFRDRVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLANEIKEGDSVIVDVDS 899

Query: 901 DGKVIVLNGSSGAP-ESLPEALPV 923
           DG V VLNGSSG P +  PE +PV
Sbjct: 900 DGNVTVLNGSSGTPSDPAPEPIPV 923


>UniRef100_P31541 ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4A,
           chloroplast precursor [Lycopersicon esculentum]
          Length = 926

 Score = 1515 bits (3923), Expect = 0.0
 Identities = 788/926 (85%), Positives = 845/926 (91%), Gaps = 4/926 (0%)

Query: 1   MSRVLAQSITIPGLVCGRSHGHNNRSTMSRRSLKMMSTLQAPALRMSGFSGLRTYNNLDT 60
           M+R L QS  I   V G   G  N S   +R+++M+  ++  + R++ F+GLR  N LDT
Sbjct: 2   MARALVQSTNILPSVAGERAGQFNGSRKDQRTVRMLCNVKCCSSRLNNFAGLRGCNALDT 61

Query: 61  ML-RPGLDFRSKVFGVTTSRKARASRCIPKAMFERFTEKAIKVIMLSQEEARRLGHNFVG 119
           +L + G    SKV   T  R+ R  R +PKAMFERFTEKAIKVIML+QEEARRLGHNFVG
Sbjct: 62  LLVKSGETLHSKVAAATFVRRPRGCRFVPKAMFERFTEKAIKVIMLAQEEARRLGHNFVG 121

Query: 120 TEQILLGLVGEGTGIAARVLKAMGISLKDARVEVEKTIGRGSGFVAVEIPFTPRAKRVLE 179
           TEQILLGL+GEGTGIAA+VLK+MGI+LKDARVEVEK IGRGSGF+AVEIPFTPRAKRVLE
Sbjct: 122 TEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFIAVEIPFTPRAKRVLE 181

Query: 180 LSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLQDLGADPNNIRAQVIRMVGESNNET 239
           LSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVL++LGADP NIR QVIRMVGES+ E 
Sbjct: 182 LSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPTNIRTQVIRMVGESS-EA 240

Query: 240 AGVAVGRGGSSNKMPTLEEYGTNLTKLANEGKLDPVVGRQQQIERVIQILGRRTKNNPCL 299
            G +VG G S  KMPTLEEYGTNLTKLA EGKLDPVVGRQ QIERV QILGRRTKNNPCL
Sbjct: 241 VGASVGGGTSGLKMPTLEEYGTNLTKLAEEGKLDPVVGRQAQIERVTQILGRRTKNNPCL 300

Query: 300 VGEPGVGKTAIAEGLAQRIATGDVPETIEGKEVITLDMGLLVAGTKYRGEFEERLKKLME 359
           +GEPGVGKTAIAEGLAQRIA GDVPETIEGK+VITLDMGLLVAGTKYRGEFEERLKKLME
Sbjct: 301 IGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLME 360

Query: 360 EIKQNDNIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEK 419
           EIKQ+D IILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEK
Sbjct: 361 EIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEK 420

Query: 420 DPALERRFQPVRVPEPTVDESIQILRGLRERYERHHKLSYTDDALVAASQLSHQYISDRF 479
           DPALERRFQPV+VPEP+VDE+IQIL+GLRERYE HHKL YTD+A+ AA++LSHQYISDRF
Sbjct: 421 DPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLHYTDEAIEAAAKLSHQYISDRF 480

Query: 480 LPDKAIDLIDEAGSRVRLRHAQLPEEARELDKEVRQIVKEKDEAVRNQDFEKAGELRDRE 539
           LPDKAIDLIDEAGSRVRLRHAQLPEEAREL+KE+RQI KEK+EAVR QDFEKAGELRDRE
Sbjct: 481 LPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDRE 540

Query: 540 MDLKTQISALIEKGKEMSKAESEA-DGAGPVVTEVDIQHIVASWTGVPVDKVSSDESDRL 598
           MDLK QISALI+K KE SKAESEA D AGP+VTE DIQHIV+SWTG+PV+KVS+DESDRL
Sbjct: 541 MDLKAQISALIDKNKEKSKAESEAGDAAGPIVTEADIQHIVSSWTGIPVEKVSTDESDRL 600

Query: 599 LKMEETLHKRVIGQDEAVKAICRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKTLA 658
           LKMEETLH RVIGQDEAVKAI RAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK+LA
Sbjct: 601 LKMEETLHTRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKSLA 660

Query: 659 SYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEI 718
           +YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEI
Sbjct: 661 TYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEI 720

Query: 719 EKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRKIGFDLDYD 778
           EKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR+IGFDLD+D
Sbjct: 721 EKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDFD 780

Query: 779 EKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKT 838
           EKDSSYNRIKSLVTEELKQYFRPEFLNRL EMIVFRQLTKLEVKEIADIMLKEVF RLK 
Sbjct: 781 EKDSSYNRIKSLVTEELKQYFRPEFLNRLSEMIVFRQLTKLEVKEIADIMLKEVFVRLKN 840

Query: 839 KEIDLSVTERFRDRVVEEGYDPSYGARPLRRAIMRLLEDSMAEKMLAGEIKEGDSVIIDA 898
           KEI+L VTERFRDRVV+EGY+PSYGARPLRRAIMRLLEDSMAEKMLAGEIKEGDSVI+D 
Sbjct: 841 KEIELQVTERFRDRVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAGEIKEGDSVIVDV 900

Query: 899 DSDGKVIVLNGSSGAP-ESLPEALPV 923
           DSDG V VLNG+SGAP +S PE + V
Sbjct: 901 DSDGNVTVLNGTSGAPSDSAPEPILV 926


>UniRef100_Q9FI56 ATP-dependent Clp protease, ATP-binding subunit [Arabidopsis
           thaliana]
          Length = 929

 Score = 1511 bits (3913), Expect = 0.0
 Identities = 787/927 (84%), Positives = 847/927 (90%), Gaps = 8/927 (0%)

Query: 2   SRVLAQSITIPGLVCGRSHGHNNRSTMSRRSLKMM-STLQAPALRMSGFSGLRTYNNLDT 60
           +RVLAQS T P L C + +  +  S  SRRS+KMM S LQ   LRM GF GLR  N LDT
Sbjct: 5   TRVLAQS-TPPSLACYQRNVPSRGSGRSRRSVKMMCSQLQVSGLRMQGFMGLRGNNALDT 63

Query: 61  MLRPGLDFRSKVFGVTTSRKARASRCIPKAMFERFTEKAIKVIMLSQEEARRLGHNFVGT 120
           + +   DF SKV       K +ASR   KAMFERFTEKAIKVIML+QEEARRLGHNFVGT
Sbjct: 64  LGKSRQDFHSKVRQAMNVPKGKASRFTVKAMFERFTEKAIKVIMLAQEEARRLGHNFVGT 123

Query: 121 EQILLGLVGEGTGIAARVLKAMGISLKDARVEVEKTIGRGSGFVAVEIPFTPRAKRVLEL 180
           EQILLGL+GEGTGIAA+VLK+MGI+LKDARVEVEK IGRGSGFVAVEIPFTPRAKRVLEL
Sbjct: 124 EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL 183

Query: 181 SLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLQDLGADPNNIRAQVIRMVGESNNETA 240
           SLEEARQLGHNYIGSEHLLLGLLREGEGVAARVL++LGADP+NIR QVIRMVGE+N  TA
Sbjct: 184 SLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGENNEVTA 243

Query: 241 GVAVGRGGSSNKMPTLEEYGTNLTKLANEGKLDPVVGRQQQIERVIQILGRRTKNNPCLV 300
            V  G G SSNKMPTLEEYGTNLTKLA EGKLDPVVGRQ QIERV+QILGRRTKNNPCL+
Sbjct: 244 NV--GGGSSSNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLI 301

Query: 301 GEPGVGKTAIAEGLAQRIATGDVPETIEGKEVITLDMGLLVAGTKYRGEFEERLKKLMEE 360
           GEPGVGKTAIAEGLAQRIA+GDVPETIEGK+VITLDMGLLVAGTKYRGEFEERLKKLMEE
Sbjct: 302 GEPGVGKTAIAEGLAQRIASGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEE 361

Query: 361 IKQNDNIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKD 420
           I+Q+D IILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKD
Sbjct: 362 IRQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKD 421

Query: 421 PALERRFQPVRVPEPTVDESIQILRGLRERYERHHKLSYTDDALVAASQLSHQYISDRFL 480
           PALERRFQPV+VPEPTVDE+IQIL+GLRERYE HHKL YTD++LVAA+QLS+QYISDRFL
Sbjct: 422 PALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDESLVAAAQLSYQYISDRFL 481

Query: 481 PDKAIDLIDEAGSRVRLRHAQLPEEARELDKEVRQIVKEKDEAVRNQDFEKAGELRDREM 540
           PDKAIDLIDEAGSRVRLRHAQ+PEEAREL+KE+RQI KEK+EAVR QDFEKAG LRDRE+
Sbjct: 482 PDKAIDLIDEAGSRVRLRHAQVPEEARELEKELRQITKEKNEAVRGQDFEKAGTLRDREI 541

Query: 541 DLKTQISALIEKGKEMSKAESEADGAGPVVTEVDIQHIVASWTGVPVDKVSSDESDRLLK 600
           +L+ ++SA+  KGKEMSKAESE    GP+VTE DIQHIV+SWTG+PV+KVS+DESDRLLK
Sbjct: 542 ELRAEVSAIQAKGKEMSKAESETGEEGPMVTESDIQHIVSSWTGIPVEKVSTDESDRLLK 601

Query: 601 MEETLHKRVIGQDEAVKAICRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKTLASY 660
           MEETLHKR+IGQDEAVKAI RAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK LA+Y
Sbjct: 602 MEETLHKRIIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAY 661

Query: 661 YFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEK 720
           YFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEK
Sbjct: 662 YFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEK 721

Query: 721 AHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRKIGFDLDYDEK 780
           AHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR+IGFDLDYDEK
Sbjct: 722 AHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEK 781

Query: 781 DSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKE 840
           DSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI+LKEVF+RLK KE
Sbjct: 782 DSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADILLKEVFERLKKKE 841

Query: 841 IDLSVTERFRDRVVEEGYDPSYGARPLRRAIMRLLEDSMAEKMLAGEIKEGDSVIIDADS 900
           I+L VTERF++RVV+EGY+PSYGARPLRRAIMRLLEDSMAEKMLA EIKEGDSVI+D D+
Sbjct: 842 IELQVTERFKERVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDA 901

Query: 901 DGKVIVLNGSSGAP----ESLPEALPV 923
           +G V VLNG SG P    E   ++LPV
Sbjct: 902 EGNVTVLNGGSGTPTTSLEEQEDSLPV 928


>UniRef100_Q7F9I1 OSJNBa0039C07.4 protein [Oryza sativa]
          Length = 888

 Score = 1497 bits (3875), Expect = 0.0
 Identities = 768/889 (86%), Positives = 818/889 (91%), Gaps = 1/889 (0%)

Query: 35  MMSTLQAPALRMSGFSGLRTYNNLDTMLRPGLDFRSKVFGVTTSRKARASRCIPKAMFER 94
           MM T+    L + GF GLR  N LD+      DF S V    +  +   SR + +AMFER
Sbjct: 1   MMRTMPTRTLTLGGFQGLRQTNFLDSRSVIKRDFGSIVASQISRPRGLGSRGVVRAMFER 60

Query: 95  FTEKAIKVIMLSQEEARRLGHNFVGTEQILLGLVGEGTGIAARVLKAMGISLKDARVEVE 154
           FTEKAIKVIML+QEEARRLGHNFVGTEQILLGL+GEGTGIAA+VLK+MGI+LKDARVEVE
Sbjct: 61  FTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVE 120

Query: 155 KTIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVL 214
           K IGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVL
Sbjct: 121 KIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVL 180

Query: 215 QDLGADPNNIRAQVIRMVGESNNETAGVAVGRGGSSNKMPTLEEYGTNLTKLANEGKLDP 274
           + LGADPNNIR QVIRMVGES  E  G  VG G S  KMPTLEEYGTNLTKLA EGKLDP
Sbjct: 181 ESLGADPNNIRTQVIRMVGEST-EAVGAGVGGGSSGQKMPTLEEYGTNLTKLAEEGKLDP 239

Query: 275 VVGRQQQIERVIQILGRRTKNNPCLVGEPGVGKTAIAEGLAQRIATGDVPETIEGKEVIT 334
           VVGRQ QIERV QILGRRTKNNPCL+GEPGVGKTAIAEGLAQRI+ GDVPETIEGK+VIT
Sbjct: 240 VVGRQDQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRISNGDVPETIEGKKVIT 299

Query: 335 LDMGLLVAGTKYRGEFEERLKKLMEEIKQNDNIILFIDEVHTLIGAGAAEGAIDAANILK 394
           LDMGLLVAGTKYRGEFEERLKKLMEEIKQND+IILFIDEVHTLIGAGAAEGAIDAANILK
Sbjct: 300 LDMGLLVAGTKYRGEFEERLKKLMEEIKQNDDIILFIDEVHTLIGAGAAEGAIDAANILK 359

Query: 395 PALARGELQCIGATTLDEYRKHIEKDPALERRFQPVRVPEPTVDESIQILRGLRERYERH 454
           PALARGELQCIGATTLDEYRKHIEKDPALERRFQPV+VPEPTVDE+IQILRGLRERYE H
Sbjct: 360 PALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETIQILRGLRERYELH 419

Query: 455 HKLSYTDDALVAASQLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELDKEVR 514
           HKL YTDD+L+AA+QLS+QYISDRFLPDKAIDLIDEAGSRVRLRHAQLP+EA+ELDKE+R
Sbjct: 420 HKLRYTDDSLIAAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPDEAKELDKELR 479

Query: 515 QIVKEKDEAVRNQDFEKAGELRDREMDLKTQISALIEKGKEMSKAESEADGAGPVVTEVD 574
           Q+ K+K+EAVR QDFEKAGELRDREM+LK QI+A+I+K KEM KAE+E+   GP+VTE D
Sbjct: 480 QVTKDKNEAVRGQDFEKAGELRDREMELKAQITAIIDKSKEMVKAETESGEVGPLVTEAD 539

Query: 575 IQHIVASWTGVPVDKVSSDESDRLLKMEETLHKRVIGQDEAVKAICRAIRRARVGLKNPN 634
           IQHIV+SWTG+PV+KVSSDESDRLLKMEETLH R+IGQDEAVKAI RAIRRARVGLKNPN
Sbjct: 540 IQHIVSSWTGIPVEKVSSDESDRLLKMEETLHTRIIGQDEAVKAISRAIRRARVGLKNPN 599

Query: 635 RPIASFIFSGPTGVGKSELAKTLASYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVG 694
           RPIASFIFSGPTGVGKSELAK LA+YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVG
Sbjct: 600 RPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVG 659

Query: 695 YTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLI 754
           YTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLI
Sbjct: 660 YTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLI 719

Query: 755 MTSNVGSSVIEKGGRKIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFR 814
           MTSNVGSSVIEKGGRKIGFDLDYDEKD+SYNRIKSLVTEELKQYFRPEFLNRLDEMIVFR
Sbjct: 720 MTSNVGSSVIEKGGRKIGFDLDYDEKDTSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFR 779

Query: 815 QLTKLEVKEIADIMLKEVFDRLKTKEIDLSVTERFRDRVVEEGYDPSYGARPLRRAIMRL 874
           QLTKLEVKEIADIMLKEVFDRLK K+IDL VTE+FRDRVV+EGY+PSYGARPLRRAIMRL
Sbjct: 780 QLTKLEVKEIADIMLKEVFDRLKAKDIDLQVTEKFRDRVVDEGYNPSYGARPLRRAIMRL 839

Query: 875 LEDSMAEKMLAGEIKEGDSVIIDADSDGKVIVLNGSSGAPESLPEALPV 923
           LEDS+AEKMLAGE+KEGDS I+D DS+GKVIVLNG SG PE L  AL V
Sbjct: 840 LEDSLAEKMLAGEVKEGDSAIVDVDSEGKVIVLNGGSGVPEPLAPALSV 888


>UniRef100_O48931 ClpC [Arabidopsis thaliana]
          Length = 928

 Score = 1494 bits (3867), Expect = 0.0
 Identities = 778/926 (84%), Positives = 839/926 (90%), Gaps = 7/926 (0%)

Query: 2   SRVLAQSITIPGLVCGRSHGHNNRSTMSRRSLKMMSTLQAPALRMSGFSGLRTYNNLDTM 61
           +RVLAQS T P L C + +  +  S  SRRS+KMM  +    L M GF GLR  N LDT+
Sbjct: 5   TRVLAQS-TPPSLACYQRNVPSRGSGRSRRSVKMMCIIFNVWLPMQGFMGLRGNNALDTL 63

Query: 62  LRPGLDFRSKVFGVTTSRKARASRCIPKAMFERFTEKAIKVIMLSQEEARRLGHNFVGTE 121
            +   DF SKV       K +ASR   KAMFERFTEKAIKVIML+QEEARRLGHNFVGTE
Sbjct: 64  GKSRQDFHSKVRQAMNVPKGKASRFTVKAMFERFTEKAIKVIMLAQEEARRLGHNFVGTE 123

Query: 122 QILLGLVGEGTGIAARVLKAMGISLKDARVEVEKTIGRGSGFVAVEIPFTPRAKRVLELS 181
           QILLGL+GEGTGIAA+VLK+MGI+LKDARVEVEK IGRGSGFVAVEIPFTPRAKRVLELS
Sbjct: 124 QILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELS 183

Query: 182 LEEARQLGHNYIGSEHLLLGLLREGEGVAARVLQDLGADPNNIRAQVIRMVGESNNETAG 241
           LE  RQLGHNYIGSEHLLLGLLREGEGVAARVL++LGADP+NIR QVIRMVGE+N  TA 
Sbjct: 184 LEATRQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGENNEVTAN 243

Query: 242 VAVGRGGSSNKMPTLEEYGTNLTKLANEGKLDPVVGRQQQIERVIQILGRRTKNNPCLVG 301
           V  G G SSNKMPTLEEYGTNLTKLA EGKLDPVVGRQ QIERV+QILGRRTKNNPCL+G
Sbjct: 244 V--GGGSSSNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIG 301

Query: 302 EPGVGKTAIAEGLAQRIATGDVPETIEGKEVITLDMGLLVAGTKYRGEFEERLKKLMEEI 361
           EPGVGKTAIAEGLAQRIA+GDVPETIEGK+VITLDMGLLVAGTKYRGEFEERLKKLMEEI
Sbjct: 302 EPGVGKTAIAEGLAQRIASGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEI 361

Query: 362 KQNDNIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDP 421
           +Q+D IILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDP
Sbjct: 362 RQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDP 421

Query: 422 ALERRFQPVRVPEPTVDESIQILRGLRERYERHHKLSYTDDALVAASQLSHQYISDRFLP 481
           ALERRFQPV+VPEPTVDE+IQIL+GLRERYE HHKL YTD++LVAA+QLS+QYISDRFLP
Sbjct: 422 ALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDESLVAAAQLSYQYISDRFLP 481

Query: 482 DKAIDLIDEAGSRVRLRHAQLPEEARELDKEVRQIVKEKDEAVRNQDFEKAGELRDREMD 541
           DKAIDLIDEAGSRVRLRHAQ+PEE REL+KE+RQI KEK+EAVR QDFEKAG LRDRE++
Sbjct: 482 DKAIDLIDEAGSRVRLRHAQVPEEVRELEKELRQITKEKNEAVRGQDFEKAGTLRDREIE 541

Query: 542 LKTQISALIEKGKEMSKAESEADGAGPVVTEVDIQHIVASWTGVPVDKVSSDESDRLLKM 601
           L+ ++SA+  KGKEMSKAESE    GP+VTE DIQHIV+SWTG+PV+KVS+DESDRLLKM
Sbjct: 542 LRAEVSAIQAKGKEMSKAESETGEEGPMVTESDIQHIVSSWTGIPVEKVSTDESDRLLKM 601

Query: 602 EETLHKRVIGQDEAVKAICRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKTLASYY 661
           EETLHKR+IGQDEAVKAI RAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK LA+YY
Sbjct: 602 EETLHKRIIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYY 661

Query: 662 FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKA 721
           FGSEEAMIRLDMSEFMERHTVS LIGS PGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKA
Sbjct: 662 FGSEEAMIRLDMSEFMERHTVSTLIGSLPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKA 721

Query: 722 HPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRKIGFDLDYDEKD 781
           HPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR+IGFDLDYDEKD
Sbjct: 722 HPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKD 781

Query: 782 SSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKEI 841
           SSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI+LKEVF+RLK KEI
Sbjct: 782 SSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADILLKEVFERLKKKEI 841

Query: 842 DLSVTERFRDRVVEEGYDPSYGARPLRRAIMRLLEDSMAEKMLAGEIKEGDSVIIDADSD 901
           +L VTERF++RVV+EGY+PSYGARPLRRAIMRLLEDSMAEKMLA EIKEGDSVI+D D++
Sbjct: 842 ELQVTERFKERVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDAE 901

Query: 902 GKVIVLNGSSGAP----ESLPEALPV 923
           G V VLNG SG P    E   ++LPV
Sbjct: 902 GNVTVLNGGSGTPTTSLEEQEDSLPV 927


>UniRef100_Q9SXJ7 AtClpC [Arabidopsis thaliana]
          Length = 952

 Score = 1470 bits (3806), Expect = 0.0
 Identities = 753/900 (83%), Positives = 829/900 (91%), Gaps = 7/900 (0%)

Query: 30  RRSLKMMSTLQAPALRMSGFSGLRTYNNLDTMLRPGLDFRSKVFGVTTSRKARASRCIPK 89
           R  +KMMS+LQAP L +  FSGLR  + LD + RP   F  K     +S + +ASRC+PK
Sbjct: 53  RGRVKMMSSLQAPLLTIQSFSGLRAPSALDYLGRPSPGFLVKYKLAKSSGREKASRCVPK 112

Query: 90  AMFERFTEKAIKVIMLSQEEARRLGHNFVGTEQILLGLVGEGTGIAARVLKAMGISLKDA 149
           AMFERFTEKAIKVIMLSQEEARRLGHNFVGTEQILLGL+GEGTGIAA+VLK+MGI+LKD+
Sbjct: 113 AMFERFTEKAIKVIMLSQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDS 172

Query: 150 RVEVEKTIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGV 209
           RVEVEK IGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGV
Sbjct: 173 RVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGV 232

Query: 210 AARVLQDLGADPNNIRAQVIRMVGESNNETAGVAVGRGGSSNKMPTLEEYGTNLTKLANE 269
           AARVL++LGADP+NIR QVIRMVGE+N  TA V  G  G+S KMPTLEEYGTNLTKLA E
Sbjct: 233 AARVLENLGADPSNIRTQVIRMVGENNEVTASVGGGSSGNS-KMPTLEEYGTNLTKLAEE 291

Query: 270 GKLDPVVGRQQQIERVIQILGRRTKNNPCLVGEPGVGKTAIAEGLAQRIATGDVPETIEG 329
           GKLDPVVGRQ QIERV+QIL RRTKNNPCL+GEPGVGKTAIAEGLAQRIA+GDVPETIEG
Sbjct: 292 GKLDPVVGRQPQIERVVQILARRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPETIEG 351

Query: 330 KEVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQNDNIILFIDEVHTLIGAGAAEGAIDA 389
           K VITLDMGLLVAGTKYRGEFEERLKKLMEEI+Q+D IILFIDEVHTLIGAGAAEGAIDA
Sbjct: 352 KTVITLDMGLLVAGTKYRGEFEERLKKLMEEIRQSDEIILFIDEVHTLIGAGAAEGAIDA 411

Query: 390 ANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVRVPEPTVDESIQILRGLRE 449
           ANILKPALARGELQCIGATT+DEYRKHIEKDPALERRFQPV+VPEPTV+E+IQIL+GLRE
Sbjct: 412 ANILKPALARGELQCIGATTIDEYRKHIEKDPALERRFQPVKVPEPTVEEAIQILQGLRE 471

Query: 450 RYERHHKLSYTDDALVAASQLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEAREL 509
           RYE HHKL YTD+ALVAA+QLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEAREL
Sbjct: 472 RYEIHHKLRYTDEALVAAAQLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEAREL 531

Query: 510 DKEVRQIVKEKDEAVRNQDFEKAGELRDREMDLKTQISALIEKGKEMSKAESEADGAGPV 569
           +K++RQI KEK+EAVR+QDFE AG  RDRE++LK +I+ ++ +GKE++KAE+EA+  GP 
Sbjct: 532 EKQLRQITKEKNEAVRSQDFEMAGSHRDREIELKAEIANVLSRGKEVAKAENEAEEGGPT 591

Query: 570 VTEVDIQHIVASWTGVPVDKVSSDESDRLLKMEETLHKRVIGQDEAVKAICRAIRRARVG 629
           VTE DIQHIVA+WTG+PV+KVSSDES RLL+ME+TLH RVIGQDEAVKAI RAIRRARVG
Sbjct: 592 VTESDIQHIVATWTGIPVEKVSSDESSRLLQMEQTLHTRVIGQDEAVKAISRAIRRARVG 651

Query: 630 LKNPNRPIASFIFSGPTGVGKSELAKTLASYYFGSEEAMIRLDMSEFMERHTVSKLIGSP 689
           LKNPNRPIASFIFSGPTGVGKSELAK LA+YYFGSEEAMIRLDMSEFMERHTVSKLIGSP
Sbjct: 652 LKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSP 711

Query: 690 PGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFK 749
           PGYVGYTEGGQLTEAVRRRPYT+VLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFK
Sbjct: 712 PGYVGYTEGGQLTEAVRRRPYTLVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFK 771

Query: 750 NTLLIMTSNVGSSVIEKGGRKIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDE 809
           NTLLIMTSNVGSSVIEKGGR+IGFDLD+DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDE
Sbjct: 772 NTLLIMTSNVGSSVIEKGGRRIGFDLDHDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDE 831

Query: 810 MIVFRQLTKLEVKEIADIMLKEVFDRLKTKEIDLSVTERFRDRVVEEGYDPSYGARPLRR 869
           MIVFRQLTKLEVKEIADIMLKEV  RL+ KEI+L VTERF++RVV+EG+DPSYGARPLRR
Sbjct: 832 MIVFRQLTKLEVKEIADIMLKEVVARLEVKEIELQVTERFKERVVDEGFDPSYGARPLRR 891

Query: 870 AIMRLLEDSMAEKMLAGEIKEGDSVIIDADSDGKVIVLNGSSG------APESLPEALPV 923
           AIMRLLEDSMAEKML+ +IKEGDSVI+D D++G V+VL+G++G      A E++ + +P+
Sbjct: 892 AIMRLLEDSMAEKMLSRDIKEGDSVIVDVDAEGSVVVLSGTTGRVGGFAAEEAMEDPIPI 951


>UniRef100_Q9M2Z6 AtClpC [Arabidopsis thaliana]
          Length = 952

 Score = 1469 bits (3803), Expect = 0.0
 Identities = 752/900 (83%), Positives = 829/900 (91%), Gaps = 7/900 (0%)

Query: 30  RRSLKMMSTLQAPALRMSGFSGLRTYNNLDTMLRPGLDFRSKVFGVTTSRKARASRCIPK 89
           R  +KMMS+LQAP L +  FSGLR  + LD + RP   F  K     +S + +ASRC+PK
Sbjct: 53  RGRVKMMSSLQAPLLTIQSFSGLRAPSALDYLGRPSPGFLVKYKLAKSSGREKASRCVPK 112

Query: 90  AMFERFTEKAIKVIMLSQEEARRLGHNFVGTEQILLGLVGEGTGIAARVLKAMGISLKDA 149
           AMFERFTEKAIKVIMLSQEEARRLGHNFVGTEQILLGL+GEGTGIAA+VLK+MGI+LKD+
Sbjct: 113 AMFERFTEKAIKVIMLSQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDS 172

Query: 150 RVEVEKTIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGV 209
           RVEVEK IGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGV
Sbjct: 173 RVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGV 232

Query: 210 AARVLQDLGADPNNIRAQVIRMVGESNNETAGVAVGRGGSSNKMPTLEEYGTNLTKLANE 269
           AARVL++LGADP+NIR QVIRMVGE+N  TA V  G  G+S KMPTLEEYGTNLTKLA E
Sbjct: 233 AARVLENLGADPSNIRTQVIRMVGENNEVTASVGGGSSGNS-KMPTLEEYGTNLTKLAEE 291

Query: 270 GKLDPVVGRQQQIERVIQILGRRTKNNPCLVGEPGVGKTAIAEGLAQRIATGDVPETIEG 329
           GKLDPVVGRQ QIER++QIL RRTKNNPCL+GEPGVGKTAIAEGLAQRIA+GDVPETIEG
Sbjct: 292 GKLDPVVGRQPQIERMVQILARRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPETIEG 351

Query: 330 KEVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQNDNIILFIDEVHTLIGAGAAEGAIDA 389
           K VITLDMGLLVAGTKYRGEFEERLKKLMEEI+Q+D IILFIDEVHTLIGAGAAEGAIDA
Sbjct: 352 KTVITLDMGLLVAGTKYRGEFEERLKKLMEEIRQSDEIILFIDEVHTLIGAGAAEGAIDA 411

Query: 390 ANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVRVPEPTVDESIQILRGLRE 449
           ANILKPALARGELQCIGATT+DEYRKHIEKDPALERRFQPV+VPEPTV+E+IQIL+GLRE
Sbjct: 412 ANILKPALARGELQCIGATTIDEYRKHIEKDPALERRFQPVKVPEPTVEEAIQILQGLRE 471

Query: 450 RYERHHKLSYTDDALVAASQLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEAREL 509
           RYE HHKL YTD+ALVAA+QLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEAREL
Sbjct: 472 RYEIHHKLRYTDEALVAAAQLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEAREL 531

Query: 510 DKEVRQIVKEKDEAVRNQDFEKAGELRDREMDLKTQISALIEKGKEMSKAESEADGAGPV 569
           +K++RQI KEK+EAVR+QDFE AG  RDRE++LK +I+ ++ +GKE++KAE+EA+  GP 
Sbjct: 532 EKQLRQITKEKNEAVRSQDFEMAGSHRDREIELKAEIANVLSRGKEVAKAENEAEEGGPT 591

Query: 570 VTEVDIQHIVASWTGVPVDKVSSDESDRLLKMEETLHKRVIGQDEAVKAICRAIRRARVG 629
           VTE DIQHIVA+WTG+PV+KVSSDES RLL+ME+TLH RVIGQDEAVKAI RAIRRARVG
Sbjct: 592 VTESDIQHIVATWTGIPVEKVSSDESSRLLQMEQTLHTRVIGQDEAVKAISRAIRRARVG 651

Query: 630 LKNPNRPIASFIFSGPTGVGKSELAKTLASYYFGSEEAMIRLDMSEFMERHTVSKLIGSP 689
           LKNPNRPIASFIFSGPTGVGKSELAK LA+YYFGSEEAMIRLDMSEFMERHTVSKLIGSP
Sbjct: 652 LKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSP 711

Query: 690 PGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFK 749
           PGYVGYTEGGQLTEAVRRRPYT+VLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFK
Sbjct: 712 PGYVGYTEGGQLTEAVRRRPYTLVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFK 771

Query: 750 NTLLIMTSNVGSSVIEKGGRKIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDE 809
           NTLLIMTSNVGSSVIEKGGR+IGFDLD+DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDE
Sbjct: 772 NTLLIMTSNVGSSVIEKGGRRIGFDLDHDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDE 831

Query: 810 MIVFRQLTKLEVKEIADIMLKEVFDRLKTKEIDLSVTERFRDRVVEEGYDPSYGARPLRR 869
           MIVFRQLTKLEVKEIADIMLKEV  RL+ KEI+L VTERF++RVV+EG+DPSYGARPLRR
Sbjct: 832 MIVFRQLTKLEVKEIADIMLKEVVARLEVKEIELQVTERFKERVVDEGFDPSYGARPLRR 891

Query: 870 AIMRLLEDSMAEKMLAGEIKEGDSVIIDADSDGKVIVLNGSSG------APESLPEALPV 923
           AIMRLLEDSMAEKML+ +IKEGDSVI+D D++G V+VL+G++G      A E++ + +P+
Sbjct: 892 AIMRLLEDSMAEKMLSRDIKEGDSVIVDVDAEGSVVVLSGTTGRVGGFAAEEAMEDPIPI 951


>UniRef100_O98447 ClpC protease [Spinacia oleracea]
          Length = 891

 Score = 1431 bits (3705), Expect = 0.0
 Identities = 747/889 (84%), Positives = 799/889 (89%), Gaps = 2/889 (0%)

Query: 1   MSRVLAQSITIPGLVCGRSHGHNNRSTMSRRSLKMMSTLQAPALRMSGFSGLRTYNNLDT 60
           M+  L QS  IP L   + +G   RS    +++KMM++LQ P  RM  FSG+R  N LDT
Sbjct: 1   MAGALIQSTNIPSLAY-KVNGQFQRSDKGNKAVKMMASLQDPGYRMRTFSGVRGGNALDT 59

Query: 61  MLRPGLDFRSKVFGVTTSRKARASRCIPKAMFERFTEKAIKVIMLSQEEARRLGHNFVGT 120
           +      F SK+  V + RK  ASR + +AMFERFTEKAIKVIML+QEEARRLGHNFVGT
Sbjct: 60  LGTTSECFYSKMRAVLSVRKGTASRGVVRAMFERFTEKAIKVIMLAQEEARRLGHNFVGT 119

Query: 121 EQILLGLVGEGTGIAARVLKAMGISLKDARVEVEKTIGRGSGFVAVEIPFTPRAKRVLEL 180
           EQILLGL+GEGTGIAA+VLK+MGI+LKDARVEVEK IGRGSGFVAVEIPFTPRAKRVLEL
Sbjct: 120 EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL 179

Query: 181 SLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLQDLGADPNNIRAQVIRMVGESNNETA 240
           SLEEARQLGHNYIGSEHLLLGLLREGEGVAARVL++LGADP+NIR QVIRMVGE N E  
Sbjct: 180 SLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGE-NTEAV 238

Query: 241 GVAVGRGGSSNKMPTLEEYGTNLTKLANEGKLDPVVGRQQQIERVIQILGRRTKNNPCLV 300
           G  VG G + NKMPTLEEYGTNLTKLA EGKLDPVVGRQ QIERV QILGRRTKNNPCL+
Sbjct: 239 GAGVGGGTTGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQAQIERVTQILGRRTKNNPCLI 298

Query: 301 GEPGVGKTAIAEGLAQRIATGDVPETIEGKEVITLDMGLLVAGTKYRGEFEERLKKLMEE 360
           GEPGVGKTAIAEGLAQRIATGDVPETIEGK+VITL MGLLVAGTKYRGEFEERLKKLMEE
Sbjct: 299 GEPGVGKTAIAEGLAQRIATGDVPETIEGKKVITLHMGLLVAGTKYRGEFEERLKKLMEE 358

Query: 361 IKQNDNIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKD 420
           IKQ+D IILFIDEVHTLIGAGAAEGAID ANILKP   RGELQCIGATTLDEYRKHIEKD
Sbjct: 359 IKQSDEIILFIDEVHTLIGAGAAEGAIDRANILKPRFRRGELQCIGATTLDEYRKHIEKD 418

Query: 421 PALERRFQPVRVPEPTVDESIQILRGLRERYERHHKLSYTDDALVAASQLSHQYISDRFL 480
           PALERRFQPV+VPEPTVDE+IQIL+GLRERYE HHKL YTD+ALVAA+QLS+QYISDRFL
Sbjct: 419 PALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYISDRFL 478

Query: 481 PDKAIDLIDEAGSRVRLRHAQLPEEARELDKEVRQIVKEKDEAVRNQDFEKAGELRDREM 540
           PDKAIDLIDEAGSRV     +  E   + +KE+RQ+ KEK+EAVR QDFEKAGELRDREM
Sbjct: 479 PDKAIDLIDEAGSRVLPSSLKKLESWLQHEKELRQLTKEKNEAVRGQDFEKAGELRDREM 538

Query: 541 DLKTQISALIEKGKEMSKAESEADGAGPVVTEVDIQHIVASWTGVPVDKVSSDESDRLLK 600
           DLK QISAL+EK KEMSKAE+EA   GP+VTE DIQHIV+SWTG+PV+KVS+DESDRLLK
Sbjct: 539 DLKAQISALVEKKKEMSKAETEAGDVGPMVTESDIQHIVSSWTGIPVEKVSTDESDRLLK 598

Query: 601 MEETLHKRVIGQDEAVKAICRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKTLASY 660
           ME+TLH RVIGQDEAVKAI RAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK LA+Y
Sbjct: 599 MEDTLHTRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAY 658

Query: 661 YFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEK 720
           YFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEK
Sbjct: 659 YFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEK 718

Query: 721 AHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRKIGFDLDYDEK 780
           AHPDVFNMMLQILEDGRLTDSKGRT DFKNTLLIMTSNVGSSVIEKGGR+IGFDLDYDEK
Sbjct: 719 AHPDVFNMMLQILEDGRLTDSKGRTADFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEK 778

Query: 781 DSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKE 840
           DSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVF RLK KE
Sbjct: 779 DSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFGRLKNKE 838

Query: 841 IDLSVTERFRDRVVEEGYDPSYGARPLRRAIMRLLEDSMAEKMLAGEIK 889
           I+L VTERFRDRVV+EGY+PSYGARPLRRAIMRLLEDSMAEKMLA + K
Sbjct: 839 IELQVTERFRDRVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLARKSK 887


>UniRef100_P46523 ATP-dependent Clp protease ATP-binding subunit clpA homolog,
           chloroplast precursor [Brassica napus]
          Length = 874

 Score = 1415 bits (3664), Expect = 0.0
 Identities = 735/872 (84%), Positives = 797/872 (91%), Gaps = 8/872 (0%)

Query: 56  NNLDTMLRPGLDFRSKVFGVTTSRKARASRCIPKAMFERFTEKAIKVIMLSQEEARRLGH 115
           N LDT+ R    F  KV       K + SR + KAMFERFTEKAIKVIML+QEEARRLGH
Sbjct: 6   NVLDTLGRSRQSFGGKVRQAMNVPKGKGSRGVVKAMFERFTEKAIKVIMLAQEEARRLGH 65

Query: 116 NFVGTEQILLGLVGEGTGIAARVLKAMGISLKDARVEVEKTIGRGSGFVAVEIPFTPRAK 175
           NFVGTEQILLGL+GEGTGIAA+VLK+MGI+LKDARVEVEK IGRGSGFVAVEIPFTPRAK
Sbjct: 66  NFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAK 125

Query: 176 RVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLQDLGADPNNIRAQVIRMVGES 235
           RVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVL++LGADP+NIR QVIRMVGE+
Sbjct: 126 RVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGEN 185

Query: 236 NNETAGVAVGRGGSSNKMPTLEEYGTNLTKLANEGKLDPVVGRQQQIERVIQILGRRTKN 295
           N  TA V  G G  +NKMPTLEEYGTNLTKLA EGKLDPVVGR  QIERV+QILGRRTKN
Sbjct: 186 NEVTANV--GGGSGTNKMPTLEEYGTNLTKLAEEGKLDPVVGRHPQIERVVQILGRRTKN 243

Query: 296 NPCLVGEPGVGKTAIAEGLAQRIATGDVPETIEGKEVITLDMGLLVAGTKYRGEFEERLK 355
           NPCL+GEPGVGKTAIAEGLAQRIA+G V ET EGK+VITLDMGLL AGTKYRGEFEER+K
Sbjct: 244 NPCLIGEPGVGKTAIAEGLAQRIASGVVRETSEGKKVITLDMGLLAAGTKYRGEFEERVK 303

Query: 356 KLMEEIKQNDNIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRK 415
           KLMEEIKQ+D IILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRK
Sbjct: 304 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRK 363

Query: 416 HIEKDPALERRFQPVRVPEPTVDESIQILRGLRERYERHHKLSYTDDALVAASQLSHQYI 475
           HIEKDPALERRFQPV+VPEPTVDE+IQIL+GLRERYE HHKL YTD++LVAA+QLS+QYI
Sbjct: 364 HIEKDPALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDESLVAAAQLSYQYI 423

Query: 476 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELDKEVRQIVKEKDEAVRNQDFEKAGEL 535
           SDRFLPD+AIDL+DEAGSRVRLRHAQ+PEEAREL+KE+RQI KE +EAVR QDFEKAG L
Sbjct: 424 SDRFLPDRAIDLMDEAGSRVRLRHAQVPEEARELEKELRQITKE-NEAVRGQDFEKAGTL 482

Query: 536 RDREMDLKTQISALIEKGKEMSKAESEADGAGPVVTEVDIQHIVASWTGVPVDKVSSDES 595
           RDRE++L+ ++SA+  KGKEMSKAESE    GP+VTE DIQHIV+SWTG+ V+KVS+DES
Sbjct: 483 RDREIELRAEVSAIQAKGKEMSKAESETGDEGPMVTESDIQHIVSSWTGILVEKVSTDES 542

Query: 596 DRLLKMEETLHKRVIGQDEAVKAICRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 655
           D LLKMEETLHKRVIGQDEAVKAI RAIRRARVGLKNPNRPIASFIF GPTGVGKSELAK
Sbjct: 543 DLLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFFGPTGVGKSELAK 602

Query: 656 TLASYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 715
            LA+YYFG EEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTE  QLTEAVRRRPYTVVLF
Sbjct: 603 ALAAYYFGCEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEPPQLTEAVRRRPYTVVLF 662

Query: 716 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRKIGFDL 775
           DEIEKAHPDVFNMMLQILEDGRLT+SKGRTVDFKNTLLIMTSNVGSSVIEKGGR+IGFDL
Sbjct: 663 DEIEKAHPDVFNMMLQILEDGRLTNSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 722

Query: 776 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 835
           DY EKDSSYNRIKSLVT+ELKQYFRPEFLNRLDEMI+FRQLTKLEVKEIADI+L+E+F+R
Sbjct: 723 DY-EKDSSYNRIKSLVTQELKQYFRPEFLNRLDEMILFRQLTKLEVKEIADILLQELFER 781

Query: 836 LKTKEIDLSVTERFRDRVVEEGYDPSYGARPLRRAIMRLLEDSMAEKMLAGEIKEGDSVI 895
           LK KE++L VTERF++RVV+EGY+PSYGARPLRRAIMRLLEDSM EKMLA EIKEGDSVI
Sbjct: 782 LKKKEVELQVTERFKERVVDEGYNPSYGARPLRRAIMRLLEDSMEEKMLAREIKEGDSVI 841

Query: 896 IDADSDGKVIVLNGSSGAP----ESLPEALPV 923
           +D DS+GKV VLNG SG P    E   ++LPV
Sbjct: 842 VDVDSEGKVTVLNGGSGTPTTSLEEQEDSLPV 873


>UniRef100_Q8DM17 ATP-dependent Clp protease regulatory subunit [Synechococcus
           elongatus]
          Length = 824

 Score = 1251 bits (3236), Expect = 0.0
 Identities = 641/833 (76%), Positives = 738/833 (87%), Gaps = 12/833 (1%)

Query: 91  MFERFTEKAIKVIMLSQEEARRLGHNFVGTEQILLGLVGEGTGIAARVLKAMGISLKDAR 150
           MFERFTEKAIKVIML+QEEARRLGHNFVGTEQILLGL+GEGTG+AA+VL++MG++LKDAR
Sbjct: 1   MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLRSMGVNLKDAR 60

Query: 151 VEVEKTIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVA 210
           +EVEK IGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIG+EHLLLGL+REGEGVA
Sbjct: 61  IEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVA 120

Query: 211 ARVLQDLGADPNNIRAQVIRMVGESNNETAGVAVGRGGSSNKMPTLEEYGTNLTKLANEG 270
           ARVL++LG D + +R QVIRM+GE+   TAG + GR     K PTL+E+G NLT+LA EG
Sbjct: 121 ARVLENLGVDLSKVRTQVIRMLGETAEVTAGASQGR----TKTPTLDEFGVNLTQLAIEG 176

Query: 271 KLDPVVGRQQQIERVIQILGRRTKNNPCLVGEPGVGKTAIAEGLAQRIATGDVPETIEGK 330
           KLDPVVGRQ++IERVIQILGRRTKNNP L+GEPGVGKTAIAEGLAQRIA  DVP+ +E K
Sbjct: 177 KLDPVVGRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANKDVPDILEDK 236

Query: 331 EVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQNDNIILFIDEVHTLIGAGAAEGAIDAA 390
            V+TLD+GLLVAGTKYRGEFEERLKK+M+EI+Q  N+IL IDEVHTLIGAGAAEGAIDAA
Sbjct: 237 RVVTLDIGLLVAGTKYRGEFEERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAA 296

Query: 391 NILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVRVPEPTVDESIQILRGLRER 450
           NILKPALARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EP+V+E+I+IL GLRER
Sbjct: 297 NILKPALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVEETIEILYGLRER 356

Query: 451 YERHHKLSYTDDALVAASQLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELD 510
           YE+HHKL  +D+AL AA++LS +YISDR+LPDKAIDLIDEAGSRVRL ++QLP  A+ELD
Sbjct: 357 YEKHHKLKISDEALEAAAKLSDRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELD 416

Query: 511 KEVRQIVKEKDEAVRNQDFEKAGELRDREMDLKTQISALIEKGK-EMSKAESEADGAGPV 569
           +E+RQ++KEKD+AVR Q+F+KAGELRDREM+LK QI A+ ++ K E++  E E     PV
Sbjct: 417 RELRQVLKEKDDAVRAQNFDKAGELRDREMELKAQIRAIAQQKKAEIANGEEET----PV 472

Query: 570 VTEVDIQHIVASWTGVPVDKVSSDESDRLLKMEETLHKRVIGQDEAVKAICRAIRRARVG 629
           VTE DI HIVASWTGVPV K++  ES++LL MEETLH+RVIGQDEAVKAI RAIRRARVG
Sbjct: 473 VTEEDIAHIVASWTGVPVSKLTESESEKLLHMEETLHQRVIGQDEAVKAISRAIRRARVG 532

Query: 630 LKNPNRPIASFIFSGPTGVGKSELAKTLASYYFGSEEAMIRLDMSEFMERHTVSKLIGSP 689
           LKNPNRPIASFIFSGPTGVGK+EL K LA+Y+FGSEEAMIRLDMSE+MERHTVSKLIGSP
Sbjct: 533 LKNPNRPIASFIFSGPTGVGKTELTKALAAYFFGSEEAMIRLDMSEYMERHTVSKLIGSP 592

Query: 690 PGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFK 749
           PGYVGY EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN++LQILEDGRLTDSKGRTVDFK
Sbjct: 593 PGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQILEDGRLTDSKGRTVDFK 652

Query: 750 NTLLIMTSNVGSSVIEKGGRKIGFDL-DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLD 808
           NTLLIMTSN+GS VIEKG   +GF+    D  +S YNRI+SLV EELKQYFRPEFLNRLD
Sbjct: 653 NTLLIMTSNIGSKVIEKGAAGLGFEFGTEDAAESQYNRIRSLVNEELKQYFRPEFLNRLD 712

Query: 809 EMIVFRQLTKLEVKEIADIMLKEVFDRLKTKEIDLSVTERFRDRVVEEGYDPSYGARPLR 868
           E+IVFRQLTK EVK+IADI+LKEVF RL  K I L VTERF++R+++EGY+PSYGARPLR
Sbjct: 713 EIIVFRQLTKDEVKQIADILLKEVFSRLTEKGITLEVTERFKERLIDEGYNPSYGARPLR 772

Query: 869 RAIMRLLEDSMAEKMLAGEIKEGDSVIIDADSDGKVIVLNGSSGAPESLPEAL 921
           RAIMRLLED++AE+ML+G I+EGD+ +ID D  G+V +   +    E LP+A+
Sbjct: 773 RAIMRLLEDTLAEEMLSGRIREGDTALIDVDESGQVKI--QAQPRRELLPQAV 823


>UniRef100_Q55023 ClpC [Synechococcus sp]
          Length = 839

 Score = 1247 bits (3226), Expect = 0.0
 Identities = 633/834 (75%), Positives = 739/834 (87%), Gaps = 10/834 (1%)

Query: 89  KAMFERFTEKAIKVIMLSQEEARRLGHNFVGTEQILLGLVGEGTGIAARVLKAMGISLKD 148
           +AMFERFTEKAIKVIML+QEEARRLGHNFVGTEQILLGL+GEGTG+AA+VLK+MG++LKD
Sbjct: 14  EAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKD 73

Query: 149 ARVEVEKTIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEG 208
           AR+EVEK IGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIG+EHLLLGL+REGEG
Sbjct: 74  ARIEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEG 133

Query: 209 VAARVLQDLGADPNNIRAQVIRMVGESNNETAGVAVGRGGSSNKMPTLEEYGTNLTKLAN 268
           VAARVL++LG D + +R QVIRM+GE    TA V+ G G    K PTL+E+G+NLT+ A 
Sbjct: 134 VAARVLENLGVDLSKVRTQVIRMLGE----TAEVSTGGGQGRTKTPTLDEFGSNLTQQAA 189

Query: 269 EGKLDPVVGRQQQIERVIQILGRRTKNNPCLVGEPGVGKTAIAEGLAQRIATGDVPETIE 328
           +GKLDPVVGRQ++IERVIQILGRRTKNNP L+GEPGVGKTAIAEGLAQRIATGD+P+ +E
Sbjct: 190 DGKLDPVVGRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIATGDIPDILE 249

Query: 329 GKEVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQNDNIILFIDEVHTLIGAGAAEGAID 388
            K V+TLD+GLLVAGTKYRGEFEERLKK+M+EI+   N+IL IDEVHTLIGAGAAEGAID
Sbjct: 250 DKRVVTLDIGLLVAGTKYRGEFEERLKKIMDEIRSAGNVILVIDEVHTLIGAGAAEGAID 309

Query: 389 AANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVRVPEPTVDESIQILRGLR 448
           AANILKPALARGELQCIGATTLDEYRKHIE+D ALERRFQPV + EP+VD++I+ILRGLR
Sbjct: 310 AANILKPALARGELQCIGATTLDEYRKHIERDAALERRFQPVMLGEPSVDDTIEILRGLR 369

Query: 449 ERYERHHKLSYTDDALVAASQLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARE 508
           ERYE+HHKL   D+AL AA++L+ +YISD FLPDKAIDLIDEAGSRVRL ++QL   A+E
Sbjct: 370 ERYEQHHKLKIADEALEAAAKLADRYISDLFLPDKAIDLIDEAGSRVRLMNSQLAPAAKE 429

Query: 509 LDKEVRQIVKEKDEAVRNQDFEKAGELRDREMDLKTQISALIEKGKEMSKAESEADGAGP 568
           LDKE+RQ++K+KD+AVR+QDF+KAGELRDREM++KTQI ++ +  K  +   S  D + P
Sbjct: 430 LDKELRQVLKDKDDAVRSQDFDKAGELRDREMEIKTQIRSIAQSKK--ADGTSSTDDS-P 486

Query: 569 VVTEVDIQHIVASWTGVPVDKVSSDESDRLLKMEETLHKRVIGQDEAVKAICRAIRRARV 628
           +VTE DI HIVASWTGVPV+K++  ES +LL MEETLH R+IGQDEAVKA+ RAIRRARV
Sbjct: 487 IVTEEDIAHIVASWTGVPVNKLTESESTKLLNMEETLHSRLIGQDEAVKAVSRAIRRARV 546

Query: 629 GLKNPNRPIASFIFSGPTGVGKSELAKTLASYYFGSEEAMIRLDMSEFMERHTVSKLIGS 688
           GLKNPNRPIASFIFSGPTGVGK+EL K LA+Y+FGSEEAMIRLDMSE+MERHTVSKLIGS
Sbjct: 547 GLKNPNRPIASFIFSGPTGVGKTELTKALAAYFFGSEEAMIRLDMSEYMERHTVSKLIGS 606

Query: 689 PPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDF 748
           PPGYVGY EGGQLTEAVRRRPYTVVL DEIEKAHPDVFN++LQ+LEDGRLTD+KGRTVDF
Sbjct: 607 PPGYVGYNEGGQLTEAVRRRPYTVVLLDEIEKAHPDVFNLLLQLLEDGRLTDAKGRTVDF 666

Query: 749 KNTLLIMTSNVGSSVIEKGGRKIGFDLD-YDEKDSSYNRIKSLVTEELKQYFRPEFLNRL 807
           KNTL+I+TSN+GS VIEKGG  +GF+    DE ++ YNRI+SLV EELKQYFRPEFLNRL
Sbjct: 667 KNTLIILTSNIGSKVIEKGGGGLGFEFSGVDEAENQYNRIRSLVNEELKQYFRPEFLNRL 726

Query: 808 DEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKEIDLSVTERFRDRVVEEGYDPSYGARPL 867
           DE+IVFRQL K EVKEIADIML+EVF R+  K I LSVTE+F+DR+VEEGY+PSYGARPL
Sbjct: 727 DEIIVFRQLNKEEVKEIADIMLREVFGRMLEKGISLSVTEKFKDRLVEEGYNPSYGARPL 786

Query: 868 RRAIMRLLEDSMAEKMLAGEIKEGDSVIIDADSDGKVIVLNGSSGAPESLPEAL 921
           RRAIMRLLEDS+AE+ L+G+++EGD+ ++D   +GKV VL  +    E LP+A+
Sbjct: 787 RRAIMRLLEDSLAEEFLSGKLREGDTAVVDIGEEGKVQVL--AQEKRELLPQAV 838



 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 35/82 (42%), Positives = 57/82 (68%)

Query: 159 RGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLQDLG 218
           R +G  A+   FT +A +V+ L+ EEAR+LGHN++G+E +LLGL+ EG GVAA+VL+ +G
Sbjct: 9   RHAGREAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMG 68

Query: 219 ADPNNIRAQVIRMVGESNNETA 240
            +  + R +V +++G  +   A
Sbjct: 69  VNLKDARIEVEKIIGRGSGFVA 90


>UniRef100_Q8YST5 Endopeptidase Clp ATP-binding chain [Anabaena sp.]
          Length = 839

 Score = 1244 bits (3218), Expect = 0.0
 Identities = 632/832 (75%), Positives = 734/832 (87%), Gaps = 10/832 (1%)

Query: 90  AMFERFTEKAIKVIMLSQEEARRLGHNFVGTEQILLGLVGEGTGIAARVLKAMGISLKDA 149
           AMFERFTEKAIKVIML+QEEARRLGHNFVGTEQILLGL+GEGTG+AA+VLK+MG++LKDA
Sbjct: 16  AMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDA 75

Query: 150 RVEVEKTIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGV 209
           R+EVEK IGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIG+EHLLLGL+REGEGV
Sbjct: 76  RIEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGV 135

Query: 210 AARVLQDLGADPNNIRAQVIRMVGESNNETAGVAVGRGGSSNKMPTLEEYGTNLTKLANE 269
           AARVL++LG D + +R QVIRM+GE+   +A    GR     K PTL+E+G+NLT++A +
Sbjct: 136 AARVLENLGVDLSKVRTQVIRMLGETAEVSATGQSGR----TKTPTLDEFGSNLTQMATD 191

Query: 270 GKLDPVVGRQQQIERVIQILGRRTKNNPCLVGEPGVGKTAIAEGLAQRIATGDVPETIEG 329
            KLDPVVGR ++IERVIQILGRRTKNNP L+GEPGVGKTAIAEGLA RIA  DVP+ +E 
Sbjct: 192 NKLDPVVGRAKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLASRIANKDVPDILED 251

Query: 330 KEVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQNDNIILFIDEVHTLIGAGAAEGAIDA 389
           K V+TLD+GLLVAGTKYRGEFEERLKK+M+EI+Q  N+IL IDEVHTLIGAGAAEGAIDA
Sbjct: 252 KRVVTLDIGLLVAGTKYRGEFEERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDA 311

Query: 390 ANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVRVPEPTVDESIQILRGLRE 449
           ANILKPALARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EP+VDE+I+IL GLR+
Sbjct: 312 ANILKPALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVDETIEILYGLRD 371

Query: 450 RYERHHKLSYTDDALVAASQLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEAREL 509
           RYE+HHKL  +D+ALVAA++LS +YISDR+LPDKAIDL+DEAGSRVRL ++QLP  A+EL
Sbjct: 372 RYEQHHKLKISDEALVAAAKLSDRYISDRYLPDKAIDLVDEAGSRVRLMNSQLPPAAKEL 431

Query: 510 DKEVRQIVKEKDEAVRNQDFEKAGELRDREMDLKTQISALIEKGKEMSKAESEADGAGPV 569
           DKE+RQI+KEKD+AVR+QDF++AGELRDREM++K +I A+ +     S  E    G  PV
Sbjct: 432 DKELRQILKEKDDAVRSQDFDRAGELRDREMEIKAEIRAIAQSKTNASGTE----GQEPV 487

Query: 570 VTEVDIQHIVASWTGVPVDKVSSDESDRLLKMEETLHKRVIGQDEAVKAICRAIRRARVG 629
           VTE DI HIVASWTGVPV+K++  ES++LL ME+TLH+R+IGQ++AVKA+ RAIRRARVG
Sbjct: 488 VTEEDIAHIVASWTGVPVNKLTESESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVG 547

Query: 630 LKNPNRPIASFIFSGPTGVGKSELAKTLASYYFGSEEAMIRLDMSEFMERHTVSKLIGSP 689
           LKNPNRPIASF+FSGPTGVGK+ELAK+LASY+FGSEEAMIRLDMSE+MERHTVSKLIGSP
Sbjct: 548 LKNPNRPIASFVFSGPTGVGKTELAKSLASYFFGSEEAMIRLDMSEYMERHTVSKLIGSP 607

Query: 690 PGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFK 749
           PGYVGY EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFK
Sbjct: 608 PGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFK 667

Query: 750 NTLLIMTSNVGSSVIEKGGRKIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDE 809
           NTLLI+TSN+GS VIEKGG  IGF+   D+ ++ YNRI+SLV EELKQYFRPEFLNRLDE
Sbjct: 668 NTLLILTSNIGSKVIEKGGGGIGFEFSEDQTETQYNRIRSLVNEELKQYFRPEFLNRLDE 727

Query: 810 MIVFRQLTKLEVKEIADIMLKEVFDRLKTKEIDLSVTERFRDRVVEEGYDPSYGARPLRR 869
           +IVFRQL+KLEV EIADIMLKEVF RL  K I L V++RF+ R++EEGY PSYGARPLRR
Sbjct: 728 IIVFRQLSKLEVTEIADIMLKEVFGRLTEKGITLEVSDRFKGRLIEEGYSPSYGARPLRR 787

Query: 870 AIMRLLEDSMAEKMLAGEIKEGDSVIIDADSDGKVIVLNGSSGAPESLPEAL 921
           AIMRLLEDS+AE++L+G IK+GD  +ID D +G V V   S    E LP+ +
Sbjct: 788 AIMRLLEDSLAEEILSGRIKDGDVALIDIDENGNVQVT--SQQRRELLPQGV 837



 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 35/81 (43%), Positives = 56/81 (68%)

Query: 160 GSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLQDLGA 219
           G G  A+   FT +A +V+ L+ EEAR+LGHN++G+E +LLGL+ EG GVAA+VL+ +G 
Sbjct: 11  GDGKNAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGV 70

Query: 220 DPNNIRAQVIRMVGESNNETA 240
           +  + R +V +++G  +   A
Sbjct: 71  NLKDARIEVEKIIGRGSGFVA 91


>UniRef100_Q55662 ATP-dependent Clp protease regulatory subunit [Synechocystis sp.]
          Length = 821

 Score = 1238 bits (3202), Expect = 0.0
 Identities = 626/822 (76%), Positives = 728/822 (88%), Gaps = 11/822 (1%)

Query: 91  MFERFTEKAIKVIMLSQEEARRLGHNFVGTEQILLGLVGEGTGIAARVLKAMGISLKDAR 150
           MFERFTEKAIKVIML+QEEARRLGHNFVGTEQILLGL+GEGTG+AA+VLK+MG++LKDAR
Sbjct: 1   MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60

Query: 151 VEVEKTIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVA 210
           +EVEK IGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIG+EHLLLGL+REGEGVA
Sbjct: 61  IEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVA 120

Query: 211 ARVLQDLGADPNNIRAQVIRMVGESNNETAGVAVGRG-GSSNKMPTLEEYGTNLTKLANE 269
           ARVL++LG D + +R QVIRM+GE    TA VA G G G   K PTL+E+G+NLT++A E
Sbjct: 121 ARVLENLGVDLSKVRTQVIRMLGE----TAEVAAGGGSGGRTKTPTLDEFGSNLTQMAAE 176

Query: 270 GKLDPVVGRQQQIERVIQILGRRTKNNPCLVGEPGVGKTAIAEGLAQRIATGDVPETIEG 329
           GKLDPVVGRQ++IERVIQILGRRTKNNP L+GEPGVGKTAIAEGLAQRIA  D+P+ +E 
Sbjct: 177 GKLDPVVGRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANKDIPDILEE 236

Query: 330 KEVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQNDNIILFIDEVHTLIGAGAAEGAIDA 389
           K V+TLD+GLLVAGTKYRGEFEERLKK+M+EI+Q  NIIL IDEVHTLIGAGAAEGAIDA
Sbjct: 237 KRVVTLDIGLLVAGTKYRGEFEERLKKIMDEIRQAGNIILVIDEVHTLIGAGAAEGAIDA 296

Query: 390 ANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVRVPEPTVDESIQILRGLRE 449
           ANILKPALARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EP+V+E+I+IL GLRE
Sbjct: 297 ANILKPALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVEETIEILYGLRE 356

Query: 450 RYERHHKLSYTDDALVAASQLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEAREL 509
           RYE+HHKL   D+AL AA++LS +YISDRFLPDKAIDLIDEAGSRVRL ++QLP  A+EL
Sbjct: 357 RYEQHHKLKILDEALEAAAKLSDRYISDRFLPDKAIDLIDEAGSRVRLINSQLPPAAKEL 416

Query: 510 DKEVRQIVKEKDEAVRNQDFEKAGELRDREMDLKTQISALIEKGKEMSKAESEADGAGPV 569
           DKE+RQI+KEKD+AVRNQDFE+AGEL+DRE ++K QI A+       S  ++E D   P 
Sbjct: 417 DKELRQILKEKDDAVRNQDFEQAGELKDREDEIKKQIRAIA------SSKKAEGDNGEPE 470

Query: 570 VTEVDIQHIVASWTGVPVDKVSSDESDRLLKMEETLHKRVIGQDEAVKAICRAIRRARVG 629
           VT  +I HIVASWTGVPV+K++  ES++LL ME+TLH+R+IGQ++AVKA+ RAIRRARVG
Sbjct: 471 VTSEEIAHIVASWTGVPVNKLTESESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVG 530

Query: 630 LKNPNRPIASFIFSGPTGVGKSELAKTLASYYFGSEEAMIRLDMSEFMERHTVSKLIGSP 689
           LKNPNRPIASFIFSGPTGVGK+EL K LA+Y+FGSEEAMIRLDMSEFMERHTVSKLIGSP
Sbjct: 531 LKNPNRPIASFIFSGPTGVGKTELTKALAAYFFGSEEAMIRLDMSEFMERHTVSKLIGSP 590

Query: 690 PGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFK 749
           PGYVGY EGGQLTEAVRRRPYTVVLFDEIEKAHPD+FNM+LQILEDGRLTD+KGRTVDFK
Sbjct: 591 PGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDIFNMLLQILEDGRLTDAKGRTVDFK 650

Query: 750 NTLLIMTSNVGSSVIEKGGRKIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDE 809
           NTLLIMTSN+GS VIEKGG  +GFD   D+ +S YNRI+SLV EELK YFRPEFLNRLDE
Sbjct: 651 NTLLIMTSNIGSKVIEKGGGGLGFDFADDQAESQYNRIRSLVNEELKNYFRPEFLNRLDE 710

Query: 810 MIVFRQLTKLEVKEIADIMLKEVFDRLKTKEIDLSVTERFRDRVVEEGYDPSYGARPLRR 869
           +IVFRQL K EVKEI++I+L++VF RL  KEI L VT++F++R+VEEG++P+YGARPLRR
Sbjct: 711 IIVFRQLNKEEVKEISEILLRDVFARLVEKEISLQVTDKFKERIVEEGFNPAYGARPLRR 770

Query: 870 AIMRLLEDSMAEKMLAGEIKEGDSVIIDADSDGKVIVLNGSS 911
           AIMRLLED +AE++L+G +KEG   ++D   D +V+V+ G +
Sbjct: 771 AIMRLLEDVLAEEILSGRLKEGSQALVDIGEDNQVVVIPGET 812


>UniRef100_UPI000026139F UPI000026139F UniRef100 entry
          Length = 831

 Score = 1223 bits (3165), Expect = 0.0
 Identities = 619/832 (74%), Positives = 729/832 (87%), Gaps = 14/832 (1%)

Query: 91  MFERFTEKAIKVIMLSQEEARRLGHNFVGTEQILLGLVGEGTGIAARVLKAMGISLKDAR 150
           MFERFTEKAIKVIML+QEEARRLGHNFVGTEQILLGL+GEGTG+AA+VLK++G++LKD+R
Sbjct: 1   MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSLGVNLKDSR 60

Query: 151 VEVEKTIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVA 210
           +EVEK IGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIG+EHLLLGL+REGEGVA
Sbjct: 61  IEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVA 120

Query: 211 ARVLQDLGADPNNIRAQVIRMVGESNNETAGVAVGRGGSSNKMPTLEEYGTNLTKLANEG 270
           ARVL++L  D   +R QVIRM+GE+     G +  +G    K  TL+E+GTNLTKLA+E 
Sbjct: 121 ARVLENLNIDLTKVRTQVIRMLGETAEVGTGASTSKGNL--KTATLDEFGTNLTKLASES 178

Query: 271 KLDPVVGRQQQIERVIQILGRRTKNNPCLVGEPGVGKTAIAEGLAQRIATGDVPETIEGK 330
           KLDPVVGR  +I+RV+QILGRRTKNNP L+GEPGVGKTAIAEGLAQRI TGD+P+ +E K
Sbjct: 179 KLDPVVGRHSEIDRVVQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIQTGDIPDILEDK 238

Query: 331 EVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQNDNIILFIDEVHTLIGAGAAEGAIDAA 390
            V+TLD+GLLVAGTKYRGEFEERLKK+MEEIK   N+IL IDEVHTLIGAGAAEGAIDAA
Sbjct: 239 RVLTLDIGLLVAGTKYRGEFEERLKKIMEEIKSAGNVILVIDEVHTLIGAGAAEGAIDAA 298

Query: 391 NILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVRVPEPTVDESIQILRGLRER 450
           NILKPALARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EP+++++I+IL+GLRER
Sbjct: 299 NILKPALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSIEDTIEILKGLRER 358

Query: 451 YERHHKLSYTDDALVAASQLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELD 510
           YE+HH+L  TDDAL AA+ L  +YISDRFLPDKAIDLIDEAGSRVRL +++LP EA+++D
Sbjct: 359 YEQHHRLKITDDALEAAAHLGDRYISDRFLPDKAIDLIDEAGSRVRLINSKLPPEAKQID 418

Query: 511 KEVRQIVKEKDEAVRNQDFEKAGELRDREMDLKTQISALIEKGKEMSKA-ESEADGA--- 566
           KE+RQ+ K+K+E+VR+Q+F++AG+LR++EM+L  +I  ++   KE +   +S+AD     
Sbjct: 419 KELRQVQKQKEESVRDQNFDQAGQLREKEMELSAKIKEVLNNKKESTAGDQSDADNTLKS 478

Query: 567 ------GPVVTEVDIQHIVASWTGVPVDKVSSDESDRLLKMEETLHKRVIGQDEAVKAIC 620
                  P+V+E D+ HIVASWTGVPV K++  ES +LL MEETLH+R+IGQDEAVKA+ 
Sbjct: 479 DSKLLQSPLVSEEDVAHIVASWTGVPVQKLTETESVKLLNMEETLHQRLIGQDEAVKAVS 538

Query: 621 RAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKTLASYYFGSEEAMIRLDMSEFMERH 680
           RAIRRARVGLKNPNRPIASFIFSGPTGVGK+EL K+LASY+FGSEEAMIRLDMSEFMERH
Sbjct: 539 RAIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKSLASYFFGSEEAMIRLDMSEFMERH 598

Query: 681 TVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTD 740
           TVSKLIGSPPGYVG+ EGGQLTEAVRRRPYTVVLFDE+EKAHPDVFN++LQ+LEDGRLTD
Sbjct: 599 TVSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEVEKAHPDVFNLLLQLLEDGRLTD 658

Query: 741 SKGRTVDFKNTLLIMTSNVGSSVIEKGGRKIGFDLDYDE-KDSSYNRIKSLVTEELKQYF 799
           SKGRTVDFKNTLLIMTSN+GS VIEKGG  +GF+   D  +DS YNRIKSLV EELKQYF
Sbjct: 659 SKGRTVDFKNTLLIMTSNIGSKVIEKGGGGLGFEFSGDSVEDSQYNRIKSLVNEELKQYF 718

Query: 800 RPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKEIDLSVTERFRDRVVEEGYD 859
           RPEFLNRLDE+IVFRQLTK EVKEIA+IML EVF RL+ K I LSVT+ F++R+VEEGY+
Sbjct: 719 RPEFLNRLDEIIVFRQLTKNEVKEIAEIMLDEVFARLEDKGIKLSVTDAFKERLVEEGYN 778

Query: 860 PSYGARPLRRAIMRLLEDSMAEKMLAGEIKEGDSVIIDADSDGKVIVLNGSS 911
           PSYGARPLRRA+MRLLEDS+AE++L+G IK+GD+ ++D D D K + +N SS
Sbjct: 779 PSYGARPLRRAVMRLLEDSLAEEVLSGRIKDGDNALVDID-DNKKVTINISS 829


>UniRef100_Q7U7P3 Endopeptidase Clp ATP-binding chain C [Synechococcus sp.]
          Length = 846

 Score = 1221 bits (3160), Expect = 0.0
 Identities = 620/842 (73%), Positives = 729/842 (85%), Gaps = 15/842 (1%)

Query: 91  MFERFTEKAIKVIMLSQEEARRLGHNFVGTEQILLGLVGEGTGIAARVLKAMGISLKDAR 150
           MFERFTEKAIKVIML+QEEARRLGHNFVGTEQILLGL+GEGTG+AA+VLK+MG++LKDAR
Sbjct: 1   MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60

Query: 151 VEVEKTIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVA 210
           VEVEK IGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIG+EHLLLGL+REGEGVA
Sbjct: 61  VEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVA 120

Query: 211 ARVLQDLGADPNNIRAQVIRMVGESNNETAGVAVGRGGSSNKMPTLEEYGTNLTKLANEG 270
           ARVL++LG D   +R QVIRM+GE+   + G   G    S K PTL+E+G+NLT++ANE 
Sbjct: 121 ARVLENLGVDLAKVRTQVIRMLGETAEVSGGGGGGGAKGSTKTPTLDEFGSNLTQMANEA 180

Query: 271 KLDPVVGRQQQIERVIQILGRRTKNNPCLVGEPGVGKTAIAEGLAQRIATGDVPETIEGK 330
           KLDPVVGR  +IERVIQILGRRTKNNP L+GEPGVGKTAIAEGLAQRI  G++P+ +E K
Sbjct: 181 KLDPVVGRHNEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIQQGEIPDILEDK 240

Query: 331 EVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQNDNIILFIDEVHTLIGAGAAEGAIDAA 390
            V+TLD+GLLVAGTKYRGEFEERLKK+MEEIK   N+IL IDEVHTLIGAGAAEGAIDAA
Sbjct: 241 RVLTLDIGLLVAGTKYRGEFEERLKKIMEEIKAAGNVILVIDEVHTLIGAGAAEGAIDAA 300

Query: 391 NILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVRVPEPTVDESIQILRGLRER 450
           NILKPALARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EP++D++I+ILRGLRER
Sbjct: 301 NILKPALARGELQCIGATTLDEYRKHIERDAALERRFQPVNVGEPSIDDTIEILRGLRER 360

Query: 451 YERHHKLSYTDDALVAASQLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELD 510
           YE+HH+L  TDDALVAA+ L  +YISDRFLPDKAIDLIDEAGSRVRL +++LP EA+E+D
Sbjct: 361 YEQHHRLKITDDALVAAATLGDRYISDRFLPDKAIDLIDEAGSRVRLLNSKLPPEAKEVD 420

Query: 511 KEVRQIVKEKDEAVRNQDFEKAGELRDREMDLKTQISALIEKGKEMSKAESEADG----- 565
           KE+R + K+K++AVR+QDF KAGELR++E++L+ QI +L++  +  + A +EA       
Sbjct: 421 KELRGVQKQKEDAVRDQDFTKAGELREKEVELRDQIRSLLQANRTDATAVAEASADQSDA 480

Query: 566 -------AGPVVTEVDIQHIVASWTGVPVDKVSSDESDRLLKMEETLHKRVIGQDEAVKA 618
                  + P+V E DI  IVASWTGVPV K++  ES +LL MEETLH+R+IGQDEAVKA
Sbjct: 481 PAAESAESSPMVNEEDIAQIVASWTGVPVQKLTESESVKLLNMEETLHQRLIGQDEAVKA 540

Query: 619 ICRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKTLASYYFGSEEAMIRLDMSEFME 678
           + +AIRRARVGLKNPNRPIASFIFSGPTGVGK+EL K LA+Y+FGSEEAMIRLDMSEFME
Sbjct: 541 VSKAIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALATYFFGSEEAMIRLDMSEFME 600

Query: 679 RHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRL 738
           RHTVSKLIGSPPGYVG+ EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN++LQ+LEDGRL
Sbjct: 601 RHTVSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQLLEDGRL 660

Query: 739 TDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRKIGFDLDYDE-KDSSYNRIKSLVTEELKQ 797
           TDSKGRTVDFKNTL+IMTSN+GS VIEKGG  +GF+   +  ++S Y RI+SLV EELKQ
Sbjct: 661 TDSKGRTVDFKNTLVIMTSNIGSKVIEKGGGGLGFEFSGESAEESQYTRIRSLVNEELKQ 720

Query: 798 YFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKEIDLSVTERFRDRVVEEG 857
           YFRPEFLNRLDE+IVFRQL++ EVKEIA+IMLKEVF R+  K I L+V++ F++R+VEEG
Sbjct: 721 YFRPEFLNRLDEIIVFRQLSRDEVKEIAEIMLKEVFGRMGEKGITLTVSDAFKERLVEEG 780

Query: 858 YDPSYGARPLRRAIMRLLEDSMAEKMLAGEIKEGDSVIIDADSDGKVIVLNGSSGAPESL 917
           Y+P+YGARPLRRA+MRLLEDS+AE++L+G IK+GD   +D D D KV+V +   G  ES 
Sbjct: 781 YNPAYGARPLRRAVMRLLEDSLAEEVLSGRIKDGDHAEVDVDDDKKVVVRH--KGLAESS 838

Query: 918 PE 919
           P+
Sbjct: 839 PQ 840


>UniRef100_UPI00002D70CD UPI00002D70CD UniRef100 entry
          Length = 841

 Score = 1221 bits (3158), Expect = 0.0
 Identities = 616/841 (73%), Positives = 734/841 (87%), Gaps = 13/841 (1%)

Query: 91  MFERFTEKAIKVIMLSQEEARRLGHNFVGTEQILLGLVGEGTGIAARVLKAMGISLKDAR 150
           MFERFTEKAIKVIML+QEEARRLGHNFVGTEQILLGL+GEGTG+AA+VLK++G++LKD+R
Sbjct: 1   MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSLGVNLKDSR 60

Query: 151 VEVEKTIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVA 210
           +EVEK IGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIG+EHLLLGL+REGEGVA
Sbjct: 61  IEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVA 120

Query: 211 ARVLQDLGADPNNIRAQVIRMVGESNNETAGVAVGRGGSSNKMPTLEEYGTNLTKLANEG 270
           ARVL++L  D   +R QVIRM+GE+    +G +  +G    K  TL+E+GTNLTKLA+E 
Sbjct: 121 ARVLENLNIDLTKVRTQVIRMLGETAEVGSGASTTKGNL--KTATLDEFGTNLTKLASES 178

Query: 271 KLDPVVGRQQQIERVIQILGRRTKNNPCLVGEPGVGKTAIAEGLAQRIATGDVPETIEGK 330
           KLDPVVGR  +I+RV+QILGRRTKNNP L+GEPGVGKTAIAEGLAQRI TGD+P+ +E K
Sbjct: 179 KLDPVVGRHSEIDRVVQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIQTGDIPDILEDK 238

Query: 331 EVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQNDNIILFIDEVHTLIGAGAAEGAIDAA 390
            V+TLD+GLLVAGTKYRGEFEERLKK+MEEIK   N+IL IDEVHTLIGAGAAEGAIDAA
Sbjct: 239 RVLTLDIGLLVAGTKYRGEFEERLKKIMEEIKSAGNVILVIDEVHTLIGAGAAEGAIDAA 298

Query: 391 NILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVRVPEPTVDESIQILRGLRER 450
           NILKPALARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EP+++++I+IL+GLRER
Sbjct: 299 NILKPALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSIEDTIEILKGLRER 358

Query: 451 YERHHKLSYTDDALVAASQLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELD 510
           YE+HH+L  TDDAL AA+ L  +YISDRFLPDKAIDLIDEAGSRVRL +++LP EA+++D
Sbjct: 359 YEQHHRLKITDDALEAAAHLGDRYISDRFLPDKAIDLIDEAGSRVRLINSKLPPEAKQID 418

Query: 511 KEVRQIVKEKDEAVRNQDFEKAGELRDREMDLKTQISALIEKGKEMSKA-ESEADGA--- 566
           +E+RQ+ K+K+E+VR+Q+F++AG+LR++EM+L  +I  +++  KE +   +S+ D +   
Sbjct: 419 RELRQVQKQKEESVRDQNFDQAGQLREKEMELSAKIKEVLDNKKESTAGDQSDEDNSIKS 478

Query: 567 ------GPVVTEVDIQHIVASWTGVPVDKVSSDESDRLLKMEETLHKRVIGQDEAVKAIC 620
                  P+V+E D+ HIVASWTGVPV K++  ES +LL MEETLH+R+IGQDEAVKA+ 
Sbjct: 479 DSKLLRSPLVSEEDVAHIVASWTGVPVQKLTETESVKLLNMEETLHQRLIGQDEAVKAVS 538

Query: 621 RAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKTLASYYFGSEEAMIRLDMSEFMERH 680
           RAIRRARVGLKNPNRPIASFIFSGPTGVGK+EL K+LASY+FGSEEAMIRLDMSEFMERH
Sbjct: 539 RAIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKSLASYFFGSEEAMIRLDMSEFMERH 598

Query: 681 TVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTD 740
           TVSKLIGSPPGYVG+ EGGQLTEAVRRRPYTVVLFDE+EKAHPDVFN++LQ+LEDGRLTD
Sbjct: 599 TVSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEVEKAHPDVFNLLLQLLEDGRLTD 658

Query: 741 SKGRTVDFKNTLLIMTSNVGSSVIEKGGRKIGFDLDYDE-KDSSYNRIKSLVTEELKQYF 799
           SKGRTVDFKNTLLIMTSN+GS VIEKGG  +GF+   D  +DS YNRIKSLV EELKQYF
Sbjct: 659 SKGRTVDFKNTLLIMTSNIGSKVIEKGGGGLGFEFSGDSVEDSQYNRIKSLVNEELKQYF 718

Query: 800 RPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKEIDLSVTERFRDRVVEEGYD 859
           RPEFLNRLDE+IVFRQLTK EVKEIA+IML+EVF RL+ K I L+VT+ F++R+VEEGY+
Sbjct: 719 RPEFLNRLDEIIVFRQLTKNEVKEIAEIMLQEVFVRLQDKGIKLNVTDAFKERLVEEGYN 778

Query: 860 PSYGARPLRRAIMRLLEDSMAEKMLAGEIKEGDSVIIDADSDGKVIVLNGSSGAPESLPE 919
           PSYGARPLRRA+MRLLEDS+AE++L+G IK+GD+ ++D D + KV +   S  + + L  
Sbjct: 779 PSYGARPLRRAVMRLLEDSLAEEVLSGRIKDGDNALVDIDDNKKVTINISSEESSQELAG 838

Query: 920 A 920
           A
Sbjct: 839 A 839


>UniRef100_UPI000025FE2C UPI000025FE2C UniRef100 entry
          Length = 841

 Score = 1219 bits (3155), Expect = 0.0
 Identities = 616/841 (73%), Positives = 734/841 (87%), Gaps = 13/841 (1%)

Query: 91  MFERFTEKAIKVIMLSQEEARRLGHNFVGTEQILLGLVGEGTGIAARVLKAMGISLKDAR 150
           MFERFTEKAIKVIML+QEEARRLGHNFVGTEQILLGL+GEGTG+AA+VLK++G++LKD+R
Sbjct: 1   MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSLGVNLKDSR 60

Query: 151 VEVEKTIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVA 210
           +EVEK IGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIG+EHLLLGL+REGEGVA
Sbjct: 61  IEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVA 120

Query: 211 ARVLQDLGADPNNIRAQVIRMVGESNNETAGVAVGRGGSSNKMPTLEEYGTNLTKLANEG 270
           ARVL++L  D   +R QVIRM+GE++   AG +  +G    K  TL+E+GTNLTKLA+E 
Sbjct: 121 ARVLENLNIDLTKVRTQVIRMLGETSEVGAGASTTKGNL--KTATLDEFGTNLTKLASES 178

Query: 271 KLDPVVGRQQQIERVIQILGRRTKNNPCLVGEPGVGKTAIAEGLAQRIATGDVPETIEGK 330
           KLDPVVGR  +I+RV+QILGRRTKNNP L+GEPGVGKTAIAEGLAQRI TGD+P+ +E K
Sbjct: 179 KLDPVVGRHSEIDRVVQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIQTGDIPDILEDK 238

Query: 331 EVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQNDNIILFIDEVHTLIGAGAAEGAIDAA 390
            V+TLD+GLLVAGTKYRGEFEERLKK+MEEIK   N+IL IDEVHTLIGAGAAEGAIDAA
Sbjct: 239 RVLTLDIGLLVAGTKYRGEFEERLKKIMEEIKSAGNVILVIDEVHTLIGAGAAEGAIDAA 298

Query: 391 NILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVRVPEPTVDESIQILRGLRER 450
           NILKPALARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EP+++++I+IL+GLRER
Sbjct: 299 NILKPALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSIEDTIEILKGLRER 358

Query: 451 YERHHKLSYTDDALVAASQLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELD 510
           YE+HH+L  TDDAL AA+ L  +YISDRFLPDKAIDLIDEAGSRVRL +++LP EA+++D
Sbjct: 359 YEQHHRLKITDDALEAAAHLGDRYISDRFLPDKAIDLIDEAGSRVRLINSKLPPEAKQID 418

Query: 511 KEVRQIVKEKDEAVRNQDFEKAGELRDREMDLKTQISALIEKGKEMSKAES-EADGA--- 566
           +E+RQ+ K+K+E+VR+Q+F++AG+LR++EM+L  +I  +++  KE +  +  +AD +   
Sbjct: 419 RELRQVQKQKEESVRDQNFDQAGQLREKEMELSAKIKEVLDNKKESTAGDQPDADDSVKS 478

Query: 567 ------GPVVTEVDIQHIVASWTGVPVDKVSSDESDRLLKMEETLHKRVIGQDEAVKAIC 620
                  P+V+E D+ HIVASWTGVPV K++  ES +LL MEETLH+R+IGQDEAVKA+ 
Sbjct: 479 DSKLLQSPLVSEEDVAHIVASWTGVPVQKLTETESVKLLNMEETLHQRLIGQDEAVKAVS 538

Query: 621 RAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKTLASYYFGSEEAMIRLDMSEFMERH 680
           RAIRRARVGLKNPNRPIASFIFSGPTGVGK+EL K+LASY+FGSEEAMIRLDMSEFMERH
Sbjct: 539 RAIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKSLASYFFGSEEAMIRLDMSEFMERH 598

Query: 681 TVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTD 740
           TVSKLIGSPPGYVG+ EGGQLTEAVRRRPYTVVLFDE+EKAHPDVFN++LQ+LEDGRLTD
Sbjct: 599 TVSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEVEKAHPDVFNLLLQLLEDGRLTD 658

Query: 741 SKGRTVDFKNTLLIMTSNVGSSVIEKGGRKIGFDLDYDE-KDSSYNRIKSLVTEELKQYF 799
           SKGRTVDFKNTLLIMTSN+GS VIEKGG  +GF+   D  +DS YNRIKSLV EELKQYF
Sbjct: 659 SKGRTVDFKNTLLIMTSNIGSKVIEKGGGGLGFEFSGDSVEDSQYNRIKSLVNEELKQYF 718

Query: 800 RPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKEIDLSVTERFRDRVVEEGYD 859
           RPEFLNRLDE+IVFRQLTK EVKEIA+IML+EVF RL+ K I L+VT+ F++R+VEEGY+
Sbjct: 719 RPEFLNRLDEIIVFRQLTKNEVKEIAEIMLQEVFVRLQDKGIKLNVTDAFKERLVEEGYN 778

Query: 860 PSYGARPLRRAIMRLLEDSMAEKMLAGEIKEGDSVIIDADSDGKVIVLNGSSGAPESLPE 919
           PS GARPLRRA+MRLLEDS+AE++L+G IK+GD+ ++D D + KV +   S  + + L  
Sbjct: 779 PSKGARPLRRAVMRLLEDSLAEEVLSGRIKDGDNALVDIDDNKKVTINISSEESSQELAG 838

Query: 920 A 920
           A
Sbjct: 839 A 839


>UniRef100_UPI000033BB5B UPI000033BB5B UniRef100 entry
          Length = 846

 Score = 1219 bits (3153), Expect = 0.0
 Identities = 617/842 (73%), Positives = 729/842 (86%), Gaps = 15/842 (1%)

Query: 91  MFERFTEKAIKVIMLSQEEARRLGHNFVGTEQILLGLVGEGTGIAARVLKAMGISLKDAR 150
           MFERFTEKAIKVIML+QEEARRLGHNFVGTEQILLGL+GEGTG+AA+VLK+MG++LKDAR
Sbjct: 1   MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60

Query: 151 VEVEKTIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVA 210
           VEVEK IGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIG+EHLLLGL+REGEGVA
Sbjct: 61  VEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVA 120

Query: 211 ARVLQDLGADPNNIRAQVIRMVGESNNETAGVAVGRGGSSNKMPTLEEYGTNLTKLANEG 270
           ARVL++LG D   +R QVIRM+GE+   + G   G    S K PTL+E+G+NLT++A+E 
Sbjct: 121 ARVLENLGVDLAKVRTQVIRMLGETAEVSGGGGGGGAKGSTKTPTLDEFGSNLTQMASEA 180

Query: 271 KLDPVVGRQQQIERVIQILGRRTKNNPCLVGEPGVGKTAIAEGLAQRIATGDVPETIEGK 330
           KLDPVVGR  +I+RVIQILGRRTKNNP L+GEPGVGKTAIAEGLAQRI  G++P+ +E K
Sbjct: 181 KLDPVVGRHNEIDRVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIQQGEIPDILEDK 240

Query: 331 EVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQNDNIILFIDEVHTLIGAGAAEGAIDAA 390
            V+TLD+GLLVAGTKYRGEFEERLKK+MEEIK   N+IL IDEVHTLIGAGAAEGAIDAA
Sbjct: 241 RVLTLDIGLLVAGTKYRGEFEERLKKIMEEIKSAGNVILVIDEVHTLIGAGAAEGAIDAA 300

Query: 391 NILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVRVPEPTVDESIQILRGLRER 450
           NILKPALARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EP++D++I+ILRGLRER
Sbjct: 301 NILKPALARGELQCIGATTLDEYRKHIERDAALERRFQPVNVGEPSIDDTIEILRGLRER 360

Query: 451 YERHHKLSYTDDALVAASQLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELD 510
           YE+HH+L  TDDALVAA+ L  +YISDRFLPDKAIDLIDEAGSRVRL +++LP EA+E+D
Sbjct: 361 YEQHHRLKITDDALVAAATLGDRYISDRFLPDKAIDLIDEAGSRVRLLNSKLPPEAKEVD 420

Query: 511 KEVRQIVKEKDEAVRNQDFEKAGELRDREMDLKTQISALIEKGKEMSKAESEADG----- 565
           KE+R + K+K++AVR+QDF KAGELR++E++L+ QI +L++  +  +  ++EA       
Sbjct: 421 KELRGVQKQKEDAVRDQDFTKAGELREKEVELRDQIRSLLQANRTDATVDAEASADQSDA 480

Query: 566 -------AGPVVTEVDIQHIVASWTGVPVDKVSSDESDRLLKMEETLHKRVIGQDEAVKA 618
                  + P+V E DI  IVASWTGVPV K++  ES +LL MEETLH+R+IGQDEAVKA
Sbjct: 481 PAAESAESSPMVNEEDIAQIVASWTGVPVQKLTESESVKLLNMEETLHQRLIGQDEAVKA 540

Query: 619 ICRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKTLASYYFGSEEAMIRLDMSEFME 678
           + +AIRRARVGLKNPNRPIASFIFSGPTGVGK+EL K LA+Y+FGSEEAMIRLDMSEFME
Sbjct: 541 VSKAIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALATYFFGSEEAMIRLDMSEFME 600

Query: 679 RHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRL 738
           RHTVSKLIGSPPGYVG+ EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN++LQ+LEDGRL
Sbjct: 601 RHTVSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQLLEDGRL 660

Query: 739 TDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRKIGFDLDYDE-KDSSYNRIKSLVTEELKQ 797
           TDSKGRTVDFKNTL+IMTSN+GS VIEKGG  +GF+   +  ++S Y RI+SLV EELKQ
Sbjct: 661 TDSKGRTVDFKNTLVIMTSNIGSKVIEKGGGGLGFEFSGESAEESQYTRIRSLVNEELKQ 720

Query: 798 YFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKEIDLSVTERFRDRVVEEG 857
           YFRPEFLNRLDE+IVFRQL++ EVKEIA+IMLKEVF R+  K I L+V++ F++R+VEEG
Sbjct: 721 YFRPEFLNRLDEIIVFRQLSRDEVKEIAEIMLKEVFGRMGEKGITLTVSDAFKERLVEEG 780

Query: 858 YDPSYGARPLRRAIMRLLEDSMAEKMLAGEIKEGDSVIIDADSDGKVIVLNGSSGAPESL 917
           Y+P+YGARPLRRA+MRLLEDS+AE++L+G IK+GD   +D D D KV+V +   G  ES 
Sbjct: 781 YNPAYGARPLRRAVMRLLEDSLAEEVLSGRIKDGDHAEVDVDDDKKVVVRH--KGLAESS 838

Query: 918 PE 919
           P+
Sbjct: 839 PQ 840


>UniRef100_O78410 ATP-dependent Clp protease ATP-binding subunit clpA homolog
           [Guillardia theta]
          Length = 819

 Score = 1219 bits (3153), Expect = 0.0
 Identities = 618/819 (75%), Positives = 717/819 (87%), Gaps = 8/819 (0%)

Query: 91  MFERFTEKAIKVIMLSQEEARRLGHNFVGTEQILLGLVGEGTGIAARVLKAMGISLKDAR 150
           MFERFTEKAIKVIML+QEEARRLGHNFVGTEQILLGL+GEGTGIAA+VLK+MG++LKDAR
Sbjct: 1   MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGVNLKDAR 60

Query: 151 VEVEKTIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVA 210
           VEVEK IGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIG+EHLLLGL+REGEGVA
Sbjct: 61  VEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVA 120

Query: 211 ARVLQDLGADPNNIRAQVIRMVGESNNETAGVAVGRGGSSNKMPTLEEYGTNLTKLANEG 270
           ARVL++L  D   +R QVIR++G+    TA V+   G +  K PTLEE+G+NLT+ A EG
Sbjct: 121 ARVLENLALDLTKVRTQVIRLLGD----TAEVSATNGQTKGKTPTLEEFGSNLTQKAAEG 176

Query: 271 KLDPVVGRQQQIERVIQILGRRTKNNPCLVGEPGVGKTAIAEGLAQRIATGDVPETIEGK 330
           KLDPV+GRQ++IERVIQILGRRTKNNP L+GEPGVGKTAIAEGLAQRI   DVP+ +E K
Sbjct: 177 KLDPVIGRQKEIERVIQILGRRTKNNPILIGEPGVGKTAIAEGLAQRINNRDVPDILEDK 236

Query: 331 EVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQNDNIILFIDEVHTLIGAGAAEGAIDAA 390
            V+TLD+GLLVAGTKYRGEFEERLKK+++EI+  +N+IL IDEVHTLIGAGAAEGAIDAA
Sbjct: 237 RVVTLDIGLLVAGTKYRGEFEERLKKIIDEIRVANNVILVIDEVHTLIGAGAAEGAIDAA 296

Query: 391 NILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVRVPEPTVDESIQILRGLRER 450
           NILKPALARGE+QCIGATTL+EYRKHIEKD ALERRFQPV V EP+V+E+I+IL GLR+R
Sbjct: 297 NILKPALARGEMQCIGATTLEEYRKHIEKDSALERRFQPVMVGEPSVEETIEILYGLRDR 356

Query: 451 YERHHKLSYTDDALVAASQLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELD 510
           YE+HHKL  +D+AL AA++ + QYI+DRFLPDKAIDLIDEAGSRVRL ++QLP  ARELD
Sbjct: 357 YEKHHKLVISDEALSAAAKFADQYIADRFLPDKAIDLIDEAGSRVRLMNSQLPPAARELD 416

Query: 511 KEVRQIVKEKDEAVRNQDFEKAGELRDREMDLKTQISALIEKGKEMSKAESEADGAGPVV 570
           KE+R+I+K+KDEAVR+QDFE AG+LRDREM++K QI+A+        K + E      VV
Sbjct: 417 KELREILKQKDEAVRSQDFETAGQLRDREMEIKAQIAAIAHS----KKGDEENTKEVSVV 472

Query: 571 TEVDIQHIVASWTGVPVDKVSSDESDRLLKMEETLHKRVIGQDEAVKAICRAIRRARVGL 630
           TE DI  IVA+WTG+PV+K++  ES++LL+MEETLH R+IGQDEAV A+ +AIRRARVGL
Sbjct: 473 TEEDIAQIVAAWTGIPVNKMTRSESEKLLQMEETLHGRIIGQDEAVVAVSKAIRRARVGL 532

Query: 631 KNPNRPIASFIFSGPTGVGKSELAKTLASYYFGSEEAMIRLDMSEFMERHTVSKLIGSPP 690
           KNPNRPIASFIFSGPTGVGK+EL K LASY+FGSEEAM+RLDMSE+MERHTVSKLIGSPP
Sbjct: 533 KNPNRPIASFIFSGPTGVGKTELTKALASYFFGSEEAMVRLDMSEYMERHTVSKLIGSPP 592

Query: 691 GYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKN 750
           GYVGY EGGQLTE+VRRRPYTVVLFDEIEK HPDVFN++LQILEDGRLTDSKGRTVDFKN
Sbjct: 593 GYVGYNEGGQLTESVRRRPYTVVLFDEIEKGHPDVFNLLLQILEDGRLTDSKGRTVDFKN 652

Query: 751 TLLIMTSNVGSSVIEKGGRKIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEM 810
           TLLI+TSNVGS VIEKGG  +GFDL  D+ +S Y RIK+LV EELKQYFRPEFLNRLDE+
Sbjct: 653 TLLILTSNVGSKVIEKGGGGLGFDLSEDQTESQYGRIKALVNEELKQYFRPEFLNRLDEI 712

Query: 811 IVFRQLTKLEVKEIADIMLKEVFDRLKTKEIDLSVTERFRDRVVEEGYDPSYGARPLRRA 870
           IVFRQLTK EV EIA+IMLKEVF R+  K I L VT RF+  ++ EGY+P YGARPLRRA
Sbjct: 713 IVFRQLTKDEVGEIAEIMLKEVFTRISEKGIQLEVTARFKTHLINEGYNPIYGARPLRRA 772

Query: 871 IMRLLEDSMAEKMLAGEIKEGDSVIIDADSDGKVIVLNG 909
           +MRLLED+++E+ LA +IKEGD+ ++D D DGKV VL G
Sbjct: 773 VMRLLEDTLSEEFLAEKIKEGDTAVVDVDDDGKVKVLLG 811


  Database: uniref100
    Posted date:  Jan 5, 2005  1:24 AM
  Number of letters in database: 848,049,833
  Number of sequences in database:  2,790,947
  
Lambda     K      H
   0.317    0.136    0.373 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,456,996,043
Number of Sequences: 2790947
Number of extensions: 62375427
Number of successful extensions: 260207
Number of sequences better than 10.0: 4472
Number of HSP's better than 10.0 without gapping: 1524
Number of HSP's successfully gapped in prelim test: 2955
Number of HSP's that attempted gapping in prelim test: 248965
Number of HSP's gapped (non-prelim): 8998
length of query: 923
length of database: 848,049,833
effective HSP length: 137
effective length of query: 786
effective length of database: 465,690,094
effective search space: 366032413884
effective search space used: 366032413884
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 80 (35.4 bits)