BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0173a.1
(217 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_O23757 Reverse transcriptase [Beta vulgaris subsp. vul... 104 1e-21
UniRef100_Q9SL12 Putative non-LTR retroelement reverse transcrip... 86 5e-16
UniRef100_Q7XF82 Putative retroelement [Oryza sativa] 85 2e-15
UniRef100_Q7FS87 Putative glycerol 3-phosphate permease [Zea mays] 81 2e-14
UniRef100_Q7XWB0 OSJNBa0061A09.16 protein [Oryza sativa] 80 3e-14
UniRef100_Q7X5Z1 OSJNBa0006A01.14 protein [Oryza sativa] 80 4e-14
UniRef100_Q7XFN5 Putative retroelement [Oryza sativa] 80 5e-14
UniRef100_Q65WR1 Putative polyprotein [Oryza sativa] 80 5e-14
UniRef100_Q84Q63 Putative reverse transcriptase [Oryza sativa] 80 5e-14
UniRef100_Q7XKK3 OSJNBa0038O10.4 protein [Oryza sativa] 80 5e-14
UniRef100_O65244 F21E10.5 protein [Arabidopsis thaliana] 79 6e-14
UniRef100_O64473 Putative non-LTR retroelement reverse transcrip... 79 6e-14
UniRef100_Q9M1N9 Hypothetical protein T18B22.50 [Arabidopsis tha... 79 8e-14
UniRef100_Q7XXA4 OSJNBa0019G23.12 protein [Oryza sativa] 79 8e-14
UniRef100_O82216 Putative non-LTR retroelement reverse transcrip... 79 8e-14
UniRef100_O81068 Putative non-LTR retroelement reverse transcrip... 79 8e-14
UniRef100_Q7XE51 Putative non-LTR retroelement reverse transcrip... 77 4e-13
UniRef100_O64612 Putative reverse transcriptase [Arabidopsis tha... 77 4e-13
UniRef100_Q9ZVF0 Putative non-LTR retroelement reverse transcrip... 77 4e-13
UniRef100_Q9FL83 Non-LTR retroelement reverse transcriptase-like... 77 4e-13
>UniRef100_O23757 Reverse transcriptase [Beta vulgaris subsp. vulgaris]
Length = 507
Score = 104 bits (260), Expect = 1e-21
Identities = 58/134 (43%), Positives = 77/134 (57%)
Query: 84 GDGF*KVKVEDKSMLEVAFTSEEIWEVVIACDGNRALGPYGFNFIFFREFWDIIKDDMMK 143
G F K+ + S L FT EEI E V +CD +A GP GFNF F + W++IK D+ K
Sbjct: 280 GLNFNKLSESECSSLIAPFTHEEIDEAVDSCDAQKAPGPDGFNFKFIKSSWEVIKKDIYK 339
Query: 144 LFVEFYEFGKLVEGLNLKFIALIPKKKILEAVSVYRPISLTGSIYILIAKDLT*RFHMVM 203
+ +F+ G L G N FIALIPK + + +RPIS+ G +Y +IAK L R VM
Sbjct: 340 IVEDFWASGSLPHGCNSAFIALIPKTQHPRGFNEFRPISMVGCLYKIIAKILARRLQRVM 399
Query: 204 PYLLSWNQFSFTKG 217
+L+ Q SF KG
Sbjct: 400 DHLIGPYQSSFIKG 413
>UniRef100_Q9SL12 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 977
Score = 86.3 bits (212), Expect = 5e-16
Identities = 48/128 (37%), Positives = 72/128 (55%)
Query: 89 KVKVEDKSMLEVAFTSEEIWEVVIACDGNRALGPYGFNFIFFREFWDIIKDDMMKLFVEF 148
KV EDK ML T EEI VV + +++LGP G+ F++ WDII ++ + F
Sbjct: 555 KVAEEDKGMLTTEVTKEEIKRVVFSMPKDKSLGPDGYRTEFYKATWDIIGEEFVLAIKSF 614
Query: 149 YEFGKLVEGLNLKFIALIPKKKILEAVSVYRPISLTGSIYILIAKDLT*RFHMVMPYLLS 208
+E G L +G+N +ALIPKK + YRPIS IY +I+K + R ++P ++
Sbjct: 615 FEKGFLPKGVNSTILALIPKKLEEIEMKDYRPISCCNVIYKVISKIIANRLKRLLPNFIA 674
Query: 209 WNQFSFTK 216
NQ +F +
Sbjct: 675 GNQSAFVQ 682
>UniRef100_Q7XF82 Putative retroelement [Oryza sativa]
Length = 586
Score = 84.7 bits (208), Expect = 2e-15
Identities = 50/132 (37%), Positives = 72/132 (53%)
Query: 85 DGF*KVKVEDKSMLEVAFTSEEIWEVVIACDGNRALGPYGFNFIFFREFWDIIKDDMMKL 144
+G +V EDK L F+ EE+ +VV NRA GP GF F+ +FW IIK +++ L
Sbjct: 2 EGVTQVSKEDKVELTKPFSLEEVKKVVFEMRQNRAPGPDGFPAEFYVKFWGIIKFELLDL 61
Query: 145 FVEFYEFGKLVEGLNLKFIALIPKKKILEAVSVYRPISLTGSIYILIAKDLT*RFHMVMP 204
+F+ VE LN + L+PK K E + +RPI L + +I K L R +M
Sbjct: 62 INDFHNGFLEVERLNYGIVTLVPKTKDAEQIQKFRPICLLNVSFKIITKVLMNRLDRIMT 121
Query: 205 YLLSWNQFSFTK 216
Y++S NQ +F K
Sbjct: 122 YIISKNQTAFLK 133
>UniRef100_Q7FS87 Putative glycerol 3-phosphate permease [Zea mays]
Length = 1279
Score = 81.3 bits (199), Expect = 2e-14
Identities = 42/121 (34%), Positives = 67/121 (54%)
Query: 96 SMLEVAFTSEEIWEVVIACDGNRALGPYGFNFIFFREFWDIIKDDMMKLFVEFYEFGKLV 155
S LE F+S EI +++ N++ GP GFN F +++W +I D LF +F+E +
Sbjct: 43 SELEQPFSSREIDQIIACLPSNKSPGPDGFNIDFVKKYWPVIAPDFYDLFNKFFEGSLCM 102
Query: 156 EGLNLKFIALIPKKKILEAVSVYRPISLTGSIYILIAKDLT*RFHMVMPYLLSWNQFSFT 215
+N ++ LIPK ++V YRPISL + ++ K L R +V+ L+ NQ+ F
Sbjct: 103 HSINGSYVTLIPKNGSPDSVGDYRPISLLNTSVKVLTKILANRLQLVITKLVHQNQYGFI 162
Query: 216 K 216
K
Sbjct: 163 K 163
>UniRef100_Q7XWB0 OSJNBa0061A09.16 protein [Oryza sativa]
Length = 764
Score = 80.5 bits (197), Expect = 3e-14
Identities = 48/115 (41%), Positives = 60/115 (51%)
Query: 102 FTSEEIWEVVIACDGNRALGPYGFNFIFFREFWDIIKDDMMKLFVEFYEFGKLVEGLNLK 161
F+ EI EVV +RA GP GFN F + W II+ D L +F E +E LN
Sbjct: 465 FSISEIDEVVKRMPTDRAPGPDGFNGCFIKSCWPIIRQDFYTLCAQFCEGNLALESLNRS 524
Query: 162 FIALIPKKKILEAVSVYRPISLTGSIYILIAKDLT*RFHMVMPYLLSWNQFSFTK 216
FI L+PKK E V+ YRPISL L+ K L R V+ L+ NQ+ F K
Sbjct: 525 FITLVPKKSTPERVNDYRPISLQSVALKLLTKVLADRLQSVITELIHQNQYGFIK 579
>UniRef100_Q7X5Z1 OSJNBa0006A01.14 protein [Oryza sativa]
Length = 1189
Score = 80.1 bits (196), Expect = 4e-14
Identities = 52/125 (41%), Positives = 68/125 (53%), Gaps = 1/125 (0%)
Query: 94 DKSMLEVAFTSEEIWEVVIACDGNRALGPYGFNFIFFREFWDIIKDDMMKLFVEFYEFGK 153
D + L FT EE+ + + ++A GP GF FF+ W+IIKDD++ +F Y
Sbjct: 431 DLATLGEPFTEEEVHKAIKEMPADKAPGPDGFTGAFFKVCWEIIKDDILLVFSSIYNLRC 490
Query: 154 L-VEGLNLKFIALIPKKKILEAVSVYRPISLTGSIYILIAKDLT*RFHMVMPYLLSWNQF 212
+ LN I LIPKK E+VS YRPISL SI + AK L R M L+S NQ
Sbjct: 491 AHLNLLNSANIVLIPKKDGAESVSDYRPISLIHSIAKIFAKMLALRLRPHMHELISVNQS 550
Query: 213 SFTKG 217
+F KG
Sbjct: 551 AFIKG 555
>UniRef100_Q7XFN5 Putative retroelement [Oryza sativa]
Length = 365
Score = 79.7 bits (195), Expect = 5e-14
Identities = 42/124 (33%), Positives = 68/124 (53%)
Query: 94 DKSMLEVAFTSEEIWEVVIACDGNRALGPYGFNFIFFREFWDIIKDDMMKLFVEFYEFGK 153
+ ML FT EE+ + +I + N+A GP GF F++ FW++IK+D+M +F EF+E
Sbjct: 16 ENEMLIKIFTEEEVKQAIIQMEQNKAPGPNGFPVEFYQVFWEVIKEDLMAIFTEFHEGIL 75
Query: 154 LVEGLNLKFIALIPKKKILEAVSVYRPISLTGSIYILIAKDLT*RFHMVMPYLLSWNQFS 213
+ LN I L+PK+K + Y PI L + + K +T R +V ++ +Q +
Sbjct: 76 PLHSLNFVIITLLPKQKEPRQIKQYIPICLLNVSFKIFPKVMTNRIALVAQKVIRSSQTA 135
Query: 214 FTKG 217
F G
Sbjct: 136 FLPG 139
>UniRef100_Q65WR1 Putative polyprotein [Oryza sativa]
Length = 1023
Score = 79.7 bits (195), Expect = 5e-14
Identities = 52/125 (41%), Positives = 67/125 (53%), Gaps = 1/125 (0%)
Query: 94 DKSMLEVAFTSEEIWEVVIACDGNRALGPYGFNFIFFREFWDIIKDDMMKLFVEFYEFGK 153
D + L FT EE+ + ++A GP GF FF+ W+IIKDD++ +F Y
Sbjct: 265 DLATLGEPFTEEEVHRAIKEMPADKAPGPDGFTGAFFKVCWEIIKDDILLVFSSIYNLRC 324
Query: 154 L-VEGLNLKFIALIPKKKILEAVSVYRPISLTGSIYILIAKDLT*RFHMVMPYLLSWNQF 212
+ LN I LIPKK E+VS YRPISL SI + AK L R M L+S NQ
Sbjct: 325 AHLNLLNSANIVLIPKKDGAESVSDYRPISLIHSIAKIFAKMLALRLRPHMHELISVNQS 384
Query: 213 SFTKG 217
+F KG
Sbjct: 385 AFIKG 389
>UniRef100_Q84Q63 Putative reverse transcriptase [Oryza sativa]
Length = 870
Score = 79.7 bits (195), Expect = 5e-14
Identities = 52/125 (41%), Positives = 67/125 (53%), Gaps = 1/125 (0%)
Query: 94 DKSMLEVAFTSEEIWEVVIACDGNRALGPYGFNFIFFREFWDIIKDDMMKLFVEFYEFGK 153
D + L FT EE+ + ++A GP GF FF+ W+IIKDD++ +F Y
Sbjct: 431 DLATLGEPFTEEEVHRAIKEMPADKAPGPDGFTGAFFKVCWEIIKDDILLVFSSIYNLRC 490
Query: 154 L-VEGLNLKFIALIPKKKILEAVSVYRPISLTGSIYILIAKDLT*RFHMVMPYLLSWNQF 212
+ LN I LIPKK E+VS YRPISL SI + AK L R M L+S NQ
Sbjct: 491 AHLNLLNSANIVLIPKKDGAESVSDYRPISLIHSIAKIFAKMLALRLRPHMHELISVNQS 550
Query: 213 SFTKG 217
+F KG
Sbjct: 551 AFIKG 555
>UniRef100_Q7XKK3 OSJNBa0038O10.4 protein [Oryza sativa]
Length = 1045
Score = 79.7 bits (195), Expect = 5e-14
Identities = 51/125 (40%), Positives = 70/125 (55%), Gaps = 1/125 (0%)
Query: 94 DKSMLEVAFTSEEIWEVVIACDGNRALGPYGFNFIFFREFWDIIKDDMMKLFVEFYEFGK 153
D S LE F+ +EI + +++ GP G+ IFF+ WDI+K+D+ +F +
Sbjct: 381 DLSTLEEPFSEQEIHRAIKEMPVDKSPGPDGYTGIFFKSCWDIVKEDVSLVFNSIFNLRC 440
Query: 154 LVEGL-NLKFIALIPKKKILEAVSVYRPISLTGSIYILIAKDLT*RFHMVMPYLLSWNQF 212
GL NL I LIPKK+ E+VS YRPISL SI + +K L R M L+S NQ
Sbjct: 441 ASLGLLNLANIVLIPKKEGAESVSDYRPISLIHSIAKIFSKLLALRLRPHMRSLVSINQS 500
Query: 213 SFTKG 217
+F KG
Sbjct: 501 AFIKG 505
>UniRef100_O65244 F21E10.5 protein [Arabidopsis thaliana]
Length = 928
Score = 79.3 bits (194), Expect = 6e-14
Identities = 43/123 (34%), Positives = 70/123 (55%)
Query: 94 DKSMLEVAFTSEEIWEVVIACDGNRALGPYGFNFIFFREFWDIIKDDMMKLFVEFYEFGK 153
DK ML ++EEI +VV + +++ GP G+ F++ W+II + + F+ G
Sbjct: 333 DKEMLTNHVSAEEIHKVVFSMPNDKSPGPDGYTAEFYKGAWNIIGAEFILAIQSFFAKGF 392
Query: 154 LVEGLNLKFIALIPKKKILEAVSVYRPISLTGSIYILIAKDLT*RFHMVMPYLLSWNQFS 213
L +G+N +ALIPKKK + + YRPIS +Y +I+K + R +V+P + NQ +
Sbjct: 393 LPKGINSTILALIPKKKEAKEMKDYRPISCCNVLYKVISKIIANRLKLVLPKFIVGNQSA 452
Query: 214 FTK 216
F K
Sbjct: 453 FVK 455
>UniRef100_O64473 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1447
Score = 79.3 bits (194), Expect = 6e-14
Identities = 42/123 (34%), Positives = 70/123 (56%)
Query: 94 DKSMLEVAFTSEEIWEVVIACDGNRALGPYGFNFIFFREFWDIIKDDMMKLFVEFYEFGK 153
+ +L T+EEI +V+ + +++ GP GF FF+ W+I+ ++ + F+ G
Sbjct: 853 EHELLTRVVTAEEIKKVLFSMPNDKSPGPDGFTSEFFKATWEILGNEFILAIQSFFAKGF 912
Query: 154 LVEGLNLKFIALIPKKKILEAVSVYRPISLTGSIYILIAKDLT*RFHMVMPYLLSWNQFS 213
L +G+N +ALIPKKK + + YRPIS IY +I+K + R +V P ++ NQ +
Sbjct: 913 LPKGINTTILALIPKKKEAKEMKDYRPISCCNVIYKVISKIIANRLKLVPPKFIAGNQSA 972
Query: 214 FTK 216
F K
Sbjct: 973 FVK 975
>UniRef100_Q9M1N9 Hypothetical protein T18B22.50 [Arabidopsis thaliana]
Length = 762
Score = 79.0 bits (193), Expect = 8e-14
Identities = 42/120 (35%), Positives = 69/120 (57%)
Query: 97 MLEVAFTSEEIWEVVIACDGNRALGPYGFNFIFFREFWDIIKDDMMKLFVEFYEFGKLVE 156
ML ++EEI +V+ + +++ GP GF FF+E W+I+ + + F+ G L +
Sbjct: 1 MLTRVVSAEEIKKVLFSMPNDKSPGPDGFTSEFFKESWEILGPEFILAIQSFFALGFLPK 60
Query: 157 GLNLKFIALIPKKKILEAVSVYRPISLTGSIYILIAKDLT*RFHMVMPYLLSWNQFSFTK 216
G+N +ALIPKK + + YRPIS +Y +I+K L R +++P ++ NQ SF K
Sbjct: 61 GVNSTILALIPKKLESKEMKDYRPISCCNVMYKVISKILANRLKLLLPQFIAGNQSSFVK 120
>UniRef100_Q7XXA4 OSJNBa0019G23.12 protein [Oryza sativa]
Length = 1140
Score = 79.0 bits (193), Expect = 8e-14
Identities = 45/124 (36%), Positives = 65/124 (52%)
Query: 94 DKSMLEVAFTSEEIWEVVIACDGNRALGPYGFNFIFFREFWDIIKDDMMKLFVEFYEFGK 153
+K M + EI E + A D N+A GP GF F+++FW++IK D++ LF EF+
Sbjct: 656 NKKMSALRRHLREIKEAIFAMDHNKAPGPDGFPVEFYQKFWEVIKHDLLNLFNEFHSGSL 715
Query: 154 LVEGLNLKFIALIPKKKILEAVSVYRPISLTGSIYILIAKDLT*RFHMVMPYLLSWNQFS 213
+ GLN I LIPK + + YRPI L Y + K T R V L++ Q +
Sbjct: 716 PIFGLNFGVITLIPKVEEANRIQQYRPICLLNVSYKIFTKVATNRISSVADNLVNPTQTA 775
Query: 214 FTKG 217
F +G
Sbjct: 776 FMRG 779
>UniRef100_O82216 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1216
Score = 79.0 bits (193), Expect = 8e-14
Identities = 42/124 (33%), Positives = 68/124 (53%)
Query: 93 EDKSMLEVAFTSEEIWEVVIACDGNRALGPYGFNFIFFREFWDIIKDDMMKLFVEFYEFG 152
+D +L T EEI +V+ + +++ GP G+ F++ W+II D+++ F+ G
Sbjct: 165 DDHRLLTRVVTGEEIKKVIFSMPKDKSPGPDGYTSEFYKASWEIIGDEVIIAIQSFFAKG 224
Query: 153 KLVEGLNLKFIALIPKKKILEAVSVYRPISLTGSIYILIAKDLT*RFHMVMPYLLSWNQF 212
L +G+N +ALIPKKK + YRPIS +Y I+K L R ++P + NQ
Sbjct: 225 FLPKGVNSTILALIPKKKEAREIKDYRPISCCNVLYKAISKILANRLKRILPKFIVGNQS 284
Query: 213 SFTK 216
+F K
Sbjct: 285 AFVK 288
>UniRef100_O81068 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1529
Score = 79.0 bits (193), Expect = 8e-14
Identities = 44/128 (34%), Positives = 68/128 (52%)
Query: 89 KVKVEDKSMLEVAFTSEEIWEVVIACDGNRALGPYGFNFIFFREFWDIIKDDMMKLFVEF 148
+ V D+++L T EEI +V+ A N++ GP G+ FF+ W + D + F
Sbjct: 737 RCSVTDQNILTREVTGEEIQKVLFAMPNNKSPGPDGYTSEFFKATWSLTGPDFIAAIQSF 796
Query: 149 YEFGKLVEGLNLKFIALIPKKKILEAVSVYRPISLTGSIYILIAKDLT*RFHMVMPYLLS 208
+ G L +GLN +ALIPKK + YRPIS +Y +I+K L R +++P +
Sbjct: 797 FVKGFLPKGLNATILALIPKKDEAIEMKDYRPISCCNVLYKVISKILANRLKLLLPSFIL 856
Query: 209 WNQFSFTK 216
NQ +F K
Sbjct: 857 QNQSAFVK 864
>UniRef100_Q7XE51 Putative non-LTR retroelement reverse transcriptase [Oryza sativa]
Length = 1652
Score = 76.6 bits (187), Expect = 4e-13
Identities = 41/129 (31%), Positives = 67/129 (51%)
Query: 89 KVKVEDKSMLEVAFTSEEIWEVVIACDGNRALGPYGFNFIFFREFWDIIKDDMMKLFVEF 148
KV + +L +F E+ E + + N+A GP GF F++ FWD+IKDD+M +F +F
Sbjct: 1134 KVTDVENELLSESFKELEVKEAIFQMEHNKAPGPDGFPAEFYQVFWDVIKDDLMAVFCDF 1193
Query: 149 YEFGKLVEGLNLKFIALIPKKKILEAVSVYRPISLTGSIYILIAKDLT*RFHMVMPYLLS 208
+E + L I L+PK+K + YRPI L + + K + R +V ++
Sbjct: 1194 HEGTLPLHRLKFGIITLLPKQKDASRIQQYRPICLLNVSFKIFTKVMANRIALVAQKVIK 1253
Query: 209 WNQFSFTKG 217
+Q +F G
Sbjct: 1254 PSQTTFLSG 1262
>UniRef100_O64612 Putative reverse transcriptase [Arabidopsis thaliana]
Length = 1412
Score = 76.6 bits (187), Expect = 4e-13
Identities = 39/126 (30%), Positives = 68/126 (53%)
Query: 89 KVKVEDKSMLEVAFTSEEIWEVVIACDGNRALGPYGFNFIFFREFWDIIKDDMMKLFVEF 148
+ + ++++L T E+ +V + N++ GP G+ FFRE W +I ++ F
Sbjct: 706 RYSLHEQNLLVAEITEAEVMKVFFSIPLNKSPGPDGYTVEFFRETWSVIGQEVTMAIKSF 765
Query: 149 YEFGKLVEGLNLKFIALIPKKKILEAVSVYRPISLTGSIYILIAKDLT*RFHMVMPYLLS 208
+ +G L +GLN +ALIPK+ + + YRPIS +Y I+K L R ++P ++
Sbjct: 766 FTYGFLPKGLNSTILALIPKRTYAKEMKDYRPISCCNVLYKAISKLLANRLKCLLPEFIA 825
Query: 209 WNQFSF 214
NQ +F
Sbjct: 826 PNQSAF 831
>UniRef100_Q9ZVF0 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1449
Score = 76.6 bits (187), Expect = 4e-13
Identities = 41/123 (33%), Positives = 69/123 (55%)
Query: 94 DKSMLEVAFTSEEIWEVVIACDGNRALGPYGFNFIFFREFWDIIKDDMMKLFVEFYEFGK 153
+K ML + +++EI + + +++ GP G+ F++ WDII + + F+E G
Sbjct: 860 EKDMLTASVSAKEIRGALFSMPNDKSPGPDGYTSEFYKRAWDIIGAEFVLAVKSFFEKGF 919
Query: 154 LVEGLNLKFIALIPKKKILEAVSVYRPISLTGSIYILIAKDLT*RFHMVMPYLLSWNQFS 213
L +G+N +ALIPKK + + YRPIS IY +I+K + R V+P ++ NQ +
Sbjct: 920 LPKGVNTTILALIPKKLEAKEMKDYRPISCCNVIYKVISKIIANRLKHVLPNFIAGNQSA 979
Query: 214 FTK 216
F K
Sbjct: 980 FVK 982
>UniRef100_Q9FL83 Non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 1223
Score = 76.6 bits (187), Expect = 4e-13
Identities = 42/123 (34%), Positives = 67/123 (54%)
Query: 94 DKSMLEVAFTSEEIWEVVIACDGNRALGPYGFNFIFFREFWDIIKDDMMKLFVEFYEFGK 153
D+ L T+EEI +V+ +++ GP G+ FF+ W+II D+ F+ G
Sbjct: 445 DQQSLIRPVTAEEIRKVLFRMPSDKSPGPDGYTSEFFKATWEIIGDEFTLAVQSFFTKGF 504
Query: 154 LVEGLNLKFIALIPKKKILEAVSVYRPISLTGSIYILIAKDLT*RFHMVMPYLLSWNQFS 213
L +G+N +ALIPKK + YRPIS +Y +I+K + R +V+P ++ NQ +
Sbjct: 505 LPKGINSTILALIPKKTEAREMKDYRPISCCNVLYKVISKIIANRLKLVLPKFIAGNQSA 564
Query: 214 FTK 216
F K
Sbjct: 565 FVK 567
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.346 0.159 0.520
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 328,095,507
Number of Sequences: 2790947
Number of extensions: 12082338
Number of successful extensions: 48695
Number of sequences better than 10.0: 365
Number of HSP's better than 10.0 without gapping: 271
Number of HSP's successfully gapped in prelim test: 94
Number of HSP's that attempted gapping in prelim test: 48302
Number of HSP's gapped (non-prelim): 385
length of query: 217
length of database: 848,049,833
effective HSP length: 122
effective length of query: 95
effective length of database: 507,554,299
effective search space: 48217658405
effective search space used: 48217658405
T: 11
A: 40
X1: 15 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 38 (21.6 bits)
S2: 72 (32.3 bits)
Lotus: description of TM0173a.1