BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0147a.4
(354 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q84ZV5 Polyprotein [Glycine max] 172 2e-41
UniRef100_Q9SQW9 Putative retroelement pol polyprotein [Arabidop... 171 3e-41
UniRef100_Q9XIG5 T10P12.3 protein [Arabidopsis thaliana] 171 4e-41
UniRef100_Q94LP8 Putative polyprotein [Oryza sativa] 169 1e-40
UniRef100_Q9FWC5 Putative plant disease resistance polyprotein [... 166 9e-40
UniRef100_Q7XEK0 Hypothetical protein [Oryza sativa] 166 9e-40
UniRef100_Q9FW76 Putative gag-pol polyprotein [Oryza sativa] 166 1e-39
UniRef100_Q9LHM4 Retroelement pol polyprotein [Arabidopsis thali... 165 2e-39
UniRef100_Q75LZ2 Putative gag-pol polyprotein [Oryza sativa] 165 2e-39
UniRef100_Q7XJX3 OSJNBa0004L19.16 protein [Oryza sativa] 165 2e-39
UniRef100_Q7XW39 OSJNBb0062H02.17 protein [Oryza sativa] 164 4e-39
UniRef100_Q7XPJ7 OSJNBa0087O24.13 protein [Oryza sativa] 163 6e-39
UniRef100_Q7XKR1 OSJNBa0053B21.10 protein [Oryza sativa] 163 6e-39
UniRef100_Q60E20 Putative polyprotein [Oryza sativa] 161 3e-38
UniRef100_Q7XL81 OSJNBb0014D23.8 protein [Oryza sativa] 161 3e-38
UniRef100_Q7Y1L5 Putative polyprotein [Oryza sativa] 160 4e-38
UniRef100_Q9C7H8 Gypsy/Ty3 element polyprotein, putative [Arabid... 160 6e-38
UniRef100_Q8SA93 Putative polyprotein [Zea mays] 157 4e-37
UniRef100_Q8W150 Polyprotein [Oryza sativa] 157 4e-37
UniRef100_Q7F9M4 OSJNBa0017P10.11 protein [Oryza sativa] 156 7e-37
>UniRef100_Q84ZV5 Polyprotein [Glycine max]
Length = 1552
Score = 172 bits (435), Expect = 2e-41
Identities = 84/165 (50%), Positives = 111/165 (66%), Gaps = 1/165 (0%)
Query: 4 PTTVWENIYMDSIGGLPKSKGKETILVVVDRLTKFAHFLPLCHLFSASEVAAGFIQEIIR 63
P VWE++ MD I GLP S G I+VV+DRLTK+AHF+PL +++ VA F+ I++
Sbjct: 1139 PQQVWEDVAMDFITGLPNSFGLSVIMVVIDRLTKYAHFIPLKADYNSKVVAEAFMSHIVK 1198
Query: 64 LHGFPSTIVSDHDS-FPE*FLEVLIQGAGTQLKFSSAYHPQTDGQTEVVNRCLEAYLRRL 122
LHG P +IVSD D F F + L + GT L SSAYHPQ+DGQ+EV+N+CLE YLR
Sbjct: 1199 LHGIPRSIVSDRDRVFTSTFWQHLFKLQGTTLAMSSAYHPQSDGQSEVLNKCLEMYLRCF 1258
Query: 123 IWTCPKNWSNCLAWAEFWFNTNYNTSRNMSPFNALSGQDPLSLLK 167
+ PK W L WAEFW+NT Y+ S M+PF AL G++P +L +
Sbjct: 1259 TYEHPKGWVKALPWAEFWYNTAYHMSLGMTPFRALYGREPPTLTR 1303
>UniRef100_Q9SQW9 Putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1661
Score = 171 bits (433), Expect = 3e-41
Identities = 81/165 (49%), Positives = 114/165 (69%), Gaps = 1/165 (0%)
Query: 4 PTTVWENIYMDSIGGLPKSKGKETILVVVDRLTKFAHFLPLCHLFSASEVAAGFIQEIIR 63
P +W ++ +D + GLP S ILVVVDRL+K++HF+PL H F+A V FI+++++
Sbjct: 1264 PQQIWSDVSLDFVEGLPSSNRFNCILVVVDRLSKYSHFIPLKHPFTAKTVVEAFIRDVVK 1323
Query: 64 LHGFPSTIVSDHDS-FPE*FLEVLIQGAGTQLKFSSAYHPQTDGQTEVVNRCLEAYLRRL 122
LHGFP+T+VSD D F F L + GT L+ S+AYHPQTDGQTEVVNRCLE+YLR
Sbjct: 1324 LHGFPNTLVSDRDRIFLSGFWSELFKLQGTGLQKSTAYHPQTDGQTEVVNRCLESYLRCF 1383
Query: 123 IWTCPKNWSNCLAWAEFWFNTNYNTSRNMSPFNALSGQDPLSLLK 167
P +W L WAE+W+NT+Y+++ +PF A+ G++P LL+
Sbjct: 1384 AGRRPTSWFQWLPWAEYWYNTSYHSATKTTPFQAVYGREPPVLLR 1428
Score = 37.7 bits (86), Expect = 0.48
Identities = 16/30 (53%), Positives = 23/30 (76%)
Query: 218 VFLKLQPYFRRCLARRINEKLSPRFYGPLQ 247
V+LKL+PY + +A R NEKLS R++GP +
Sbjct: 1483 VYLKLRPYRQSSVAHRKNEKLSQRYFGPFK 1512
>UniRef100_Q9XIG5 T10P12.3 protein [Arabidopsis thaliana]
Length = 1264
Score = 171 bits (432), Expect = 4e-41
Identities = 108/253 (42%), Positives = 146/253 (57%), Gaps = 9/253 (3%)
Query: 6 TVWENIYMDSIGGLPKSKGKETILVVVDRLTKFAHFLPLCHLFSASEVAAGFIQEIIRLH 65
TVWE+I +D I GLP S G ILVVVDRL+K +FL L HLF A +VA F+ E+++L+
Sbjct: 845 TVWEDISVDFIEGLPTSGGVNVILVVVDRLSKAVYFLGLKHLFKAIDVANKFVSEVVKLY 904
Query: 66 GFPSTIVSDHDS-FPE*FLEVLIQGAGTQLKFSSAYHPQTDGQTEVVNRCLEAYLRRLIW 124
GFP +IVSD D F + + + +GTQLK S++Y PQTDGQTEV+NRCLE YLR
Sbjct: 905 GFPKSIVSDRDRIFLGAVWKDMFKLSGTQLKHSTSYRPQTDGQTEVLNRCLETYLRCFTS 964
Query: 125 TCPKNWSNCLAWAEFWFNTNYNTSRNMSPFNALSGQDPLSLLK-GLSYHQGWKR*IS*YV 183
+ P+ W LAW EF FNT Y+++ SPF + G+DP SL++ L W +
Sbjct: 965 SHPRAWHKYLAWVEFSFNTAYHSALKTSPFKVVYGRDPPSLVRFELGSTDNWDLEVQLKE 1024
Query: 184 VEMSCWLI*GKIC*HDAFFC**A*AR-----CGVCSW*LVFLKLQPYFRRCLARRINEKL 238
++ I + A + V W V LKLQPY +R + RR KL
Sbjct: 1025 RDLMLEHIRANLQRAQEIMKRNADMKRRDVVFAVGDW--VHLKLQPYRQRTVVRRPCYKL 1082
Query: 239 SPRFYGPLQG*ER 251
+ +F+GP + ER
Sbjct: 1083 AAKFFGPFEIVER 1095
>UniRef100_Q94LP8 Putative polyprotein [Oryza sativa]
Length = 1409
Score = 169 bits (428), Expect = 1e-40
Identities = 83/160 (51%), Positives = 107/160 (66%), Gaps = 1/160 (0%)
Query: 4 PTTVWENIYMDSIGGLPKSKGKETILVVVDRLTKFAHFLPLCHLFSASEVAAGFIQEIIR 63
P W +I MD I GLPKSKGK+ ILVVVDRLTK+AHFL L H +S +V F+ I +
Sbjct: 1155 PDMAWTHITMDFIEGLPKSKGKDVILVVVDRLTKYAHFLALTHPYSVEQVVEVFMDNIHK 1214
Query: 64 LHGFPSTIVSDHDS-FPE*FLEVLIQGAGTQLKFSSAYHPQTDGQTEVVNRCLEAYLRRL 122
LHG P I++D D F + + + QL+FS+AYHPQTDGQTE VN+CLE+YLR +
Sbjct: 1215 LHGMPMAIITDRDRIFTSQLFQEVFKAMKVQLRFSTAYHPQTDGQTERVNQCLESYLRSM 1274
Query: 123 IWTCPKNWSNCLAWAEFWFNTNYNTSRNMSPFNALSGQDP 162
+ P W + LA AE+W+NT Y+TS M+PF A+ G P
Sbjct: 1275 AFQEPHQWYSWLALAEWWYNTTYHTSLQMTPFQAMYGYPP 1314
>UniRef100_Q9FWC5 Putative plant disease resistance polyprotein [Oryza sativa]
Length = 921
Score = 166 bits (420), Expect = 9e-40
Identities = 85/160 (53%), Positives = 105/160 (65%), Gaps = 1/160 (0%)
Query: 4 PTTVWENIYMDSIGGLPKSKGKETILVVVDRLTKFAHFLPLCHLFSASEVAAGFIQEIIR 63
P W++I MD I GLP+S G ILVVVDR TK+A+F+PLCH F+AS+VA + + +
Sbjct: 546 PKEAWQDISMDFIEGLPRSDGYNAILVVVDRFTKYANFIPLCHPFTASQVAHLVDKTVFK 605
Query: 64 LHGFPSTIVSDHDS-FPE*FLEVLIQGAGTQLKFSSAYHPQTDGQTEVVNRCLEAYLRRL 122
HG P +IVSD D F F L TQL+ S+AYHPQ DGQTE VN+CLE YLR +
Sbjct: 606 THGIPRSIVSDRDRLFTSKFWTTLFATWDTQLQMSTAYHPQIDGQTERVNQCLEMYLRCM 665
Query: 123 IWTCPKNWSNCLAWAEFWFNTNYNTSRNMSPFNALSGQDP 162
PK WS+ + AEFW+NTNY+TS SP AL G DP
Sbjct: 666 TQANPKKWSHWIHLAEFWYNTNYHTSLGCSPHKALFGVDP 705
>UniRef100_Q7XEK0 Hypothetical protein [Oryza sativa]
Length = 1611
Score = 166 bits (420), Expect = 9e-40
Identities = 82/160 (51%), Positives = 109/160 (67%), Gaps = 1/160 (0%)
Query: 4 PTTVWENIYMDSIGGLPKSKGKETILVVVDRLTKFAHFLPLCHLFSASEVAAGFIQEIIR 63
P W +I MD I GLPKS+GK+ ILVVVDRLTK+AHFL L H ++ +V F+ I +
Sbjct: 1259 PDMAWTHITMDFIEGLPKSQGKDVILVVVDRLTKYAHFLALSHPYTVEQVVQIFMDNIHK 1318
Query: 64 LHGFPSTIVSDHDS-FPE*FLEVLIQGAGTQLKFSSAYHPQTDGQTEVVNRCLEAYLRRL 122
LHG P IV+D D F F + + + +L+FS+A+HPQTDGQTE VN+CLE+YLR +
Sbjct: 1319 LHGMPMVIVTDRDRVFTSNFFQEIFKTQKVKLRFSTAHHPQTDGQTERVNQCLESYLRSM 1378
Query: 123 IWTCPKNWSNCLAWAEFWFNTNYNTSRNMSPFNALSGQDP 162
+ P+ W + LA AE+W+NT Y+TS M+PF AL G P
Sbjct: 1379 TFQEPQKWFSWLALAEWWYNTTYHTSIQMTPFQALYGYPP 1418
>UniRef100_Q9FW76 Putative gag-pol polyprotein [Oryza sativa]
Length = 1608
Score = 166 bits (419), Expect = 1e-39
Identities = 103/265 (38%), Positives = 138/265 (51%), Gaps = 38/265 (14%)
Query: 4 PTTVWENIYMDSIGGLPKSKGKETILVVVDRLTKFAHFLPLCHLFSASEVAAGFIQEIIR 63
P W+ I +D I GLP+S ILVVVD+ +K++HF+PL H F+A VA F++ I +
Sbjct: 1188 PAGAWQTISLDFIEGLPRSSHYNCILVVVDKFSKYSHFIPLSHPFNAGGVAQEFMKNIYK 1247
Query: 64 LHGFPSTIVSDHDS-FPE*FLEVLIQGAGTQLKFSSAYHPQTDGQTEVVNRCLEAYLRRL 122
LHG P I+SD D F F + L GT L SSAYHPQ+DGQTE VN+CLE YLR
Sbjct: 1248 LHGLPRAIISDRDKIFTSQFWDQLFSKFGTDLHMSSAYHPQSDGQTERVNQCLEIYLRCF 1307
Query: 123 IWTCPKNWSNCLAWAEFWFNTNYNTSRNMSPFNALSGQDPLSLLKGLSYHQGWKR*IS*Y 182
+ P WS+ L AEFW+NT+++++ N +PF L G P GL Q
Sbjct: 1308 VHAAPHKWSSWLYLAEFWYNTSFHSTLNKTPFEVLYGYTPSHFGIGLDDCQ--------- 1358
Query: 183 VVEMSCWLI*GKI---------------C*HDA-----FFC**A*ARCGVCSW*LVFLKL 222
+ ++ W K H A F + V W V+LKL
Sbjct: 1359 IADLHEWHTERKFMQQLLQQHLNRAQQQMKHQADKKRSF------RQFAVGDW--VYLKL 1410
Query: 223 QPYFRRCLARRINEKLSPRFYGPLQ 247
QPY + +A+R KL+ R+YGP Q
Sbjct: 1411 QPYVQTFVAQRACHKLAFRYYGPFQ 1435
>UniRef100_Q9LHM4 Retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1499
Score = 165 bits (418), Expect = 2e-39
Identities = 83/160 (51%), Positives = 105/160 (64%), Gaps = 1/160 (0%)
Query: 4 PTTVWENIYMDSIGGLPKSKGKETILVVVDRLTKFAHFLPLCHLFSASEVAAGFIQEIIR 63
P T+W + MD I GLP S GK I+VVVDRL+K AHF+ L H +SA VA ++ + +
Sbjct: 1149 PDTIWSEVSMDFIEGLPVSGGKTVIMVVVDRLSKAAHFIALSHPYSALTVAHAYLDNVFK 1208
Query: 64 LHGFPSTIVSDHDS-FPE*FLEVLIQGAGTQLKFSSAYHPQTDGQTEVVNRCLEAYLRRL 122
LHG P++IVSD D F F G LK +SAYHPQ+DGQTEVVNRCLE YLR +
Sbjct: 1209 LHGCPTSIVSDRDVVFTSEFWREFFTLQGVALKLTSAYHPQSDGQTEVVNRCLETYLRCM 1268
Query: 123 IWTCPKNWSNCLAWAEFWFNTNYNTSRNMSPFNALSGQDP 162
P+ WS LA AE+W+NTNY++S M+PF + GQ P
Sbjct: 1269 CHDRPQLWSKWLALAEYWYNTNYHSSSRMTPFEIVYGQVP 1308
Score = 38.1 bits (87), Expect = 0.37
Identities = 14/28 (50%), Positives = 23/28 (82%)
Query: 218 VFLKLQPYFRRCLARRINEKLSPRFYGP 245
V++KLQPY ++ + R N+KLSP+++GP
Sbjct: 1368 VYVKLQPYRQQSVVMRANQKLSPKYFGP 1395
>UniRef100_Q75LZ2 Putative gag-pol polyprotein [Oryza sativa]
Length = 1377
Score = 165 bits (417), Expect = 2e-39
Identities = 79/163 (48%), Positives = 109/163 (66%), Gaps = 1/163 (0%)
Query: 1 IRPPTTVWENIYMDSIGGLPKSKGKETILVVVDRLTKFAHFLPLCHLFSASEVAAGFIQE 60
++ P W+ I MD I GLP+S +ILV+VD+ TKFAHFLPL H F+A VA F+
Sbjct: 1087 VQIPEHAWQVISMDFIEGLPRSASYNSILVIVDKFTKFAHFLPLSHPFTAVSVAQLFMDR 1146
Query: 61 IIRLHGFPSTIVSDHDS-FPE*FLEVLIQGAGTQLKFSSAYHPQTDGQTEVVNRCLEAYL 119
I +HG P I+SD D F F + L + +GTQL+ SS+YHPQTDGQTE VN+CLE +L
Sbjct: 1147 IHSIHGLPQAIISDRDRVFTSIFWKELFRRSGTQLQMSSSYHPQTDGQTERVNQCLEMFL 1206
Query: 120 RRLIWTCPKNWSNCLAWAEFWFNTNYNTSRNMSPFNALSGQDP 162
R + CP WS L+ A+FW+NT+++++ ++PF A+ G P
Sbjct: 1207 RCFVHACPSRWSKWLSLAQFWYNTSFHSTLMLTPFEAMFGHKP 1249
Score = 39.3 bits (90), Expect = 0.17
Identities = 16/30 (53%), Positives = 23/30 (76%)
Query: 218 VFLKLQPYFRRCLARRINEKLSPRFYGPLQ 247
VF+KLQPY ++ + R N+KL+ +FYGP Q
Sbjct: 1309 VFMKLQPYVQQSVMTRANQKLAFKFYGPFQ 1338
>UniRef100_Q7XJX3 OSJNBa0004L19.16 protein [Oryza sativa]
Length = 1586
Score = 165 bits (417), Expect = 2e-39
Identities = 79/160 (49%), Positives = 106/160 (65%), Gaps = 1/160 (0%)
Query: 4 PTTVWENIYMDSIGGLPKSKGKETILVVVDRLTKFAHFLPLCHLFSASEVAAGFIQEIIR 63
P W +I MD + GLPKS GK+ ILVVVDRLTK+AHF+ + H ++ +V F+ I R
Sbjct: 1234 PDMAWAHITMDFVEGLPKSNGKDVILVVVDRLTKYAHFIAMAHPYTVEQVVELFMNNIHR 1293
Query: 64 LHGFPSTIVSDHDS-FPE*FLEVLIQGAGTQLKFSSAYHPQTDGQTEVVNRCLEAYLRRL 122
LHG P I++D D F + + + +LKFS++YHPQTDGQTE VN+CLE+YLR +
Sbjct: 1294 LHGMPMAIITDRDRIFTSQLFQEIFKSMKVRLKFSTSYHPQTDGQTERVNQCLESYLRSM 1353
Query: 123 IWTCPKNWSNCLAWAEFWFNTNYNTSRNMSPFNALSGQDP 162
+ P W + LA AE+W+NT Y+TS M+PF AL G P
Sbjct: 1354 TFQEPTRWHSWLALAEWWYNTTYHTSIQMTPFQALYGYPP 1393
>UniRef100_Q7XW39 OSJNBb0062H02.17 protein [Oryza sativa]
Length = 1629
Score = 164 bits (414), Expect = 4e-39
Identities = 77/160 (48%), Positives = 106/160 (66%), Gaps = 1/160 (0%)
Query: 4 PTTVWENIYMDSIGGLPKSKGKETILVVVDRLTKFAHFLPLCHLFSASEVAAGFIQEIIR 63
P W+ + +D + GLPKS ILVVVD+ +K++HF+PL H FSA +VA ++Q I R
Sbjct: 1229 PDHAWQIVSLDFVEGLPKSASFNCILVVVDKFSKYSHFVPLTHPFSALDVAEAYMQHIHR 1288
Query: 64 LHGFPSTIVSDHDS-FPE*FLEVLIQGAGTQLKFSSAYHPQTDGQTEVVNRCLEAYLRRL 122
LHG P +++SD D F L + AGTQL+ SS+YHPQTDGQTE VN+CLE +LR
Sbjct: 1289 LHGLPQSLISDRDRIFTSTLWTTLFRLAGTQLRMSSSYHPQTDGQTERVNQCLETFLRCF 1348
Query: 123 IWTCPKNWSNCLAWAEFWFNTNYNTSRNMSPFNALSGQDP 162
+ CP WS LA AE+W+NT+++++ +PF L G P
Sbjct: 1349 VHACPSQWSRWLALAEYWYNTSFHSALGTTPFEVLYGHKP 1388
Score = 39.3 bits (90), Expect = 0.17
Identities = 17/30 (56%), Positives = 22/30 (72%)
Query: 218 VFLKLQPYFRRCLARRINEKLSPRFYGPLQ 247
V+LKLQP+ ++ + R N KLS RFYGP Q
Sbjct: 1448 VYLKLQPFVQQSVVTRANRKLSFRFYGPFQ 1477
>UniRef100_Q7XPJ7 OSJNBa0087O24.13 protein [Oryza sativa]
Length = 1311
Score = 163 bits (413), Expect = 6e-39
Identities = 78/160 (48%), Positives = 108/160 (66%), Gaps = 1/160 (0%)
Query: 4 PTTVWENIYMDSIGGLPKSKGKETILVVVDRLTKFAHFLPLCHLFSASEVAAGFIQEIIR 63
P W +I MD I GLPKS K+ I V+VDR TK+AHF+ L H F+A ++ F++ +
Sbjct: 959 PEMAWTHISMDFIEGLPKSDNKDVIWVIVDRFTKYAHFVALSHPFTADQIVTQFVENYYK 1018
Query: 64 LHGFPSTIVSDHDS-FPE*FLEVLIQGAGTQLKFSSAYHPQTDGQTEVVNRCLEAYLRRL 122
HG P+ IVSD D F + + + AG +L FSSAYHPQTDGQTE VN+CLE YLR +
Sbjct: 1019 HHGLPAVIVSDRDRIFTSQTWKDVFEKAGVKLHFSSAYHPQTDGQTERVNQCLENYLRCM 1078
Query: 123 IWTCPKNWSNCLAWAEFWFNTNYNTSRNMSPFNALSGQDP 162
+T PK W + LA+A++W+NT+++T+ M+P+ AL G P
Sbjct: 1079 TFTKPKKWKSLLAYAKWWYNTSFHTTLGMTPYQALHGVPP 1118
>UniRef100_Q7XKR1 OSJNBa0053B21.10 protein [Oryza sativa]
Length = 582
Score = 163 bits (413), Expect = 6e-39
Identities = 79/163 (48%), Positives = 109/163 (66%), Gaps = 1/163 (0%)
Query: 4 PTTVWENIYMDSIGGLPKSKGKETILVVVDRLTKFAHFLPLCHLFSASEVAAGFIQEIIR 63
P+ VW +I MD + GLP+ GK IL VVDR +KFAHF+P+ H ++A+ VAA F EI+R
Sbjct: 196 PSAVWADIAMDFVEGLPRVHGKTVILTVVDRFSKFAHFIPMAHPYTATSVAAAFFSEIVR 255
Query: 64 LHGFPSTIVSDHDS-FPE*FLEVLIQGAGTQLKFSSAYHPQTDGQTEVVNRCLEAYLRRL 122
LHG P++IVSD D F F L + AG +L SSA+HPQ+DGQ+EV N+ + YLR L
Sbjct: 256 LHGVPASIVSDRDPVFTSTFWRELFRLAGVRLNLSSAFHPQSDGQSEVTNKIIAMYLRCL 315
Query: 123 IWTCPKNWSNCLAWAEFWFNTNYNTSRNMSPFNALSGQDPLSL 165
P++W L WAE+ +NT+Y +S SPF + G++P +L
Sbjct: 316 TGDRPRHWLRWLPWAEYCYNTSYQSSLRTSPFRVVYGREPPTL 358
>UniRef100_Q60E20 Putative polyprotein [Oryza sativa]
Length = 1475
Score = 161 bits (407), Expect = 3e-38
Identities = 76/160 (47%), Positives = 105/160 (65%), Gaps = 1/160 (0%)
Query: 4 PTTVWENIYMDSIGGLPKSKGKETILVVVDRLTKFAHFLPLCHLFSASEVAAGFIQEIIR 63
P W +I MD I GLPKS+GK+ ILVVVDRLTK+AHF+ L H + +V F+ I +
Sbjct: 1123 PDMAWTHITMDFIEGLPKSQGKDVILVVVDRLTKYAHFIALAHPYDVEQVVEAFMNNIHK 1182
Query: 64 LHGFPSTIVSDHDS-FPE*FLEVLIQGAGTQLKFSSAYHPQTDGQTEVVNRCLEAYLRRL 122
LHG P I++D D F + + + +L+FS+AYHPQ DGQTE VN+CLE+YLR +
Sbjct: 1183 LHGMPMVIITDRDRIFTSSLFQEIFKAMKVKLRFSTAYHPQMDGQTERVNQCLESYLRNM 1242
Query: 123 IWTCPKNWSNCLAWAEFWFNTNYNTSRNMSPFNALSGQDP 162
+ P W + LA AE+W+NT ++T+ M+PF A+ G P
Sbjct: 1243 TFQEPHKWYSWLALAEWWYNTTFHTAIQMTPFKAMYGYSP 1282
>UniRef100_Q7XL81 OSJNBb0014D23.8 protein [Oryza sativa]
Length = 1545
Score = 161 bits (407), Expect = 3e-38
Identities = 103/265 (38%), Positives = 138/265 (51%), Gaps = 38/265 (14%)
Query: 4 PTTVWENIYMDSIGGLPKSKGKETILVVVDRLTKFAHFLPLCHLFSASEVAAGFIQEIIR 63
P W+ + MD I GLPKS +I VVVD+ +K++HF+PL H FSA +VA F+ I +
Sbjct: 632 PEGAWQVLTMDFIEGLPKSGKFNSIFVVVDKFSKYSHFIPLSHPFSAIDVAQAFMCNIYK 691
Query: 64 LHGFPSTIVSDHDS-FPE*FLEVLIQGAGTQLKFSSAYHPQTDGQTEVVNRCLEAYLRRL 122
LHG P I+SD D F F E L +GTQL+ ++AYHPQTDGQTE VN+CLE YLR
Sbjct: 692 LHGLPRFIISDRDRIFTSQFWEQLFPRSGTQLQLTTAYHPQTDGQTERVNQCLEIYLRCF 751
Query: 123 IWTCPKNWSNCLAWAEFWFNTNYNTSRNMSPFNALSGQDPLSLLKGLSYHQGWKR*IS*Y 182
+ P WS+ L AEFWFNT+Y+++ S P +L G R S
Sbjct: 752 VHAMPSKWSSWLYLAEFWFNTSYHSTLFKS---------PFEVLYGYPPGHFGIREDSCS 802
Query: 183 VVEMSCWLI*GKIC*H--------------------DAFFC**A*ARCGVCSW*LVFLKL 222
+ ++ WL K+ +F V W V+LKL
Sbjct: 803 IPDLHAWLSERKLMTQLLKQHLIRAQQQMKVYADKKRSF------REFVVGDW--VYLKL 854
Query: 223 QPYFRRCLARRINEKLSPRFYGPLQ 247
QPY + +ARR N KL +++GP Q
Sbjct: 855 QPYIQSSVARRANHKLCFKYFGPFQ 879
>UniRef100_Q7Y1L5 Putative polyprotein [Oryza sativa]
Length = 627
Score = 160 bits (406), Expect = 4e-38
Identities = 78/156 (50%), Positives = 106/156 (67%), Gaps = 1/156 (0%)
Query: 8 WENIYMDSIGGLPKSKGKETILVVVDRLTKFAHFLPLCHLFSASEVAAGFIQEIIRLHGF 67
W +I MD I GLPKS GK+ ILVVVDRLTK+ HF+ + H +S +V F+ I +L+G
Sbjct: 3 WTHISMDFIEGLPKSHGKDVILVVVDRLTKYVHFVAMSHPYSVEQVVEVFMNNIHKLYGM 62
Query: 68 PSTIVSDHDS-FPE*FLEVLIQGAGTQLKFSSAYHPQTDGQTEVVNRCLEAYLRRLIWTC 126
P IV+D D F F + + + L+FS+AYHPQTDGQT+ VN+CLE+YLR + +
Sbjct: 63 PMAIVTDRDRIFTSQFFQEVFKAMKVHLRFSTAYHPQTDGQTKRVNQCLESYLRNMTFKE 122
Query: 127 PKNWSNCLAWAEFWFNTNYNTSRNMSPFNALSGQDP 162
P++W + LA AE+W+NT Y+TS M+PF AL G P
Sbjct: 123 PQHWYSWLALAEWWYNTTYHTSLQMTPFQALYGYPP 158
>UniRef100_Q9C7H8 Gypsy/Ty3 element polyprotein, putative [Arabidopsis thaliana]
Length = 1447
Score = 160 bits (404), Expect = 6e-38
Identities = 80/160 (50%), Positives = 105/160 (65%), Gaps = 1/160 (0%)
Query: 4 PTTVWENIYMDSIGGLPKSKGKETILVVVDRLTKFAHFLPLCHLFSASEVAAGFIQEIIR 63
P +W ++ MD I GLP S GK I+VVVDRL+K AHF+ L H +SA VA F+ + +
Sbjct: 1120 PDKIWCDVSMDFIEGLPNSGGKSVIMVVVDRLSKAAHFVALAHPYSALTVAQAFLDNVYK 1179
Query: 64 LHGFPSTIVSDHDS-FPE*FLEVLIQGAGTQLKFSSAYHPQTDGQTEVVNRCLEAYLRRL 122
HG P++IVSD D F F + + G +L+ SSAYHPQ+DGQTEVVNRCLE YLR +
Sbjct: 1180 HHGCPTSIVSDRDVLFTSDFWKEFFKLQGVELRMSSAYHPQSDGQTEVVNRCLENYLRCM 1239
Query: 123 IWTCPKNWSNCLAWAEFWFNTNYNTSRNMSPFNALSGQDP 162
P W+ L AE+W+NTNY++S M+PF + GQ P
Sbjct: 1240 CHARPHLWNKWLPLAEYWYNTNYHSSSQMTPFELVYGQAP 1279
Score = 39.3 bits (90), Expect = 0.17
Identities = 14/28 (50%), Positives = 24/28 (85%)
Query: 218 VFLKLQPYFRRCLARRINEKLSPRFYGP 245
V++KLQPY ++ + R+N+KLSP+++GP
Sbjct: 1339 VYVKLQPYRQQSVVLRVNQKLSPKYFGP 1366
>UniRef100_Q8SA93 Putative polyprotein [Zea mays]
Length = 2749
Score = 157 bits (397), Expect = 4e-37
Identities = 78/167 (46%), Positives = 111/167 (65%), Gaps = 1/167 (0%)
Query: 1 IRPPTTVWENIYMDSIGGLPKSKGKETILVVVDRLTKFAHFLPLCHLFSASEVAAGFIQE 60
++ P+ VW +I MD I GLPK GK IL VVDR +K+AHF+PL H ++A+ VA F
Sbjct: 1487 LQVPSQVWADISMDFIEGLPKVGGKSVILTVVDRFSKYAHFIPLGHPYTAASVARAFFDG 1546
Query: 61 IIRLHGFPSTIVSDHDS-FPE*FLEVLIQGAGTQLKFSSAYHPQTDGQTEVVNRCLEAYL 119
I+RLHGFPS+IVSD D F L + AG L+ S+A+HPQTDGQ+EVVN+ + YL
Sbjct: 1547 IVRLHGFPSSIVSDRDPVFTGHVWRDLFKCAGVSLRMSTAFHPQTDGQSEVVNKVIAMYL 1606
Query: 120 RRLIWTCPKNWSNCLAWAEFWFNTNYNTSRNMSPFNALSGQDPLSLL 166
R + P+ W + L+WAE+ +NT+++T+ +PF + G+ P +L
Sbjct: 1607 RCVTGDRPRAWVDWLSWAEYCYNTSFHTALRATPFEVVYGRPPPPIL 1653
>UniRef100_Q8W150 Polyprotein [Oryza sativa]
Length = 933
Score = 157 bits (397), Expect = 4e-37
Identities = 79/160 (49%), Positives = 104/160 (64%), Gaps = 1/160 (0%)
Query: 4 PTTVWENIYMDSIGGLPKSKGKETILVVVDRLTKFAHFLPLCHLFSASEVAAGFIQEIIR 63
P W+ I MD I GLPKS ++ ILVVVD+ +K+AHF+PL H FSA +VA F+ + +
Sbjct: 528 PDGAWQIISMDFIEGLPKSYHQDCILVVVDKFSKYAHFMPLSHPFSALDVAKVFMLNVYK 587
Query: 64 LHGFPSTIVSDHDS-FPE*FLEVLIQGAGTQLKFSSAYHPQTDGQTEVVNRCLEAYLRRL 122
LHG P I+SD D F E L +GT+L SSAYHPQ+DGQTE VN+CLE +LR
Sbjct: 588 LHGLPQIIISDRDKIFTSALWEQLFLRSGTKLHLSSAYHPQSDGQTERVNQCLEIFLRCF 647
Query: 123 IWTCPKNWSNCLAWAEFWFNTNYNTSRNMSPFNALSGQDP 162
+ P WS L AEFW+N++Y+++ N +PF L G P
Sbjct: 648 VHATPAKWSLWLHLAEFWYNSSYHSALNKTPFEVLYGYPP 687
>UniRef100_Q7F9M4 OSJNBa0017P10.11 protein [Oryza sativa]
Length = 1012
Score = 156 bits (395), Expect = 7e-37
Identities = 77/160 (48%), Positives = 102/160 (63%), Gaps = 1/160 (0%)
Query: 4 PTTVWENIYMDSIGGLPKSKGKETILVVVDRLTKFAHFLPLCHLFSASEVAAGFIQEIIR 63
P W+ + +D I GLPKS G ILVVVD+ +K+AHF+PL H F+ + VA F+ + +
Sbjct: 584 PEGAWQVVSLDFIEGLPKSHGFNCILVVVDKFSKYAHFIPLYHPFTTASVAQEFMTHVYK 643
Query: 64 LHGFPSTIVSDHDS-FPE*FLEVLIQGAGTQLKFSSAYHPQTDGQTEVVNRCLEAYLRRL 122
LHG P TI+SD D F E L +GT+L SSAYHPQTDGQTE VN+CLE YLR
Sbjct: 644 LHGLPRTIISDRDRIFTSQLWEFLFTKSGTKLHKSSAYHPQTDGQTERVNQCLETYLRCF 703
Query: 123 IWTCPKNWSNCLAWAEFWFNTNYNTSRNMSPFNALSGQDP 162
+ P W L AEFW+N +Y+++ +PF+ L G +P
Sbjct: 704 VHAVPSKWFYWLYLAEFWYNCSYHSAIRATPFSVLYGHEP 743
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.349 0.154 0.574
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 559,873,218
Number of Sequences: 2790947
Number of extensions: 21172728
Number of successful extensions: 73835
Number of sequences better than 10.0: 1741
Number of HSP's better than 10.0 without gapping: 971
Number of HSP's successfully gapped in prelim test: 770
Number of HSP's that attempted gapping in prelim test: 70839
Number of HSP's gapped (non-prelim): 2270
length of query: 354
length of database: 848,049,833
effective HSP length: 128
effective length of query: 226
effective length of database: 490,808,617
effective search space: 110922747442
effective search space used: 110922747442
T: 11
A: 40
X1: 14 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 38 (21.8 bits)
S2: 75 (33.5 bits)
Lotus: description of TM0147a.4