
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0135.12
(76 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q9AVH2 Putative senescence-associated protein [Pisum s... 115 3e-25
UniRef100_UPI00004289D5 UPI00004289D5 UniRef100 entry 50 1e-05
UniRef100_UPI0000274C17 UPI0000274C17 UniRef100 entry 44 0.001
UniRef100_UPI00002352BD UPI00002352BD UniRef100 entry 42 0.004
UniRef100_UPI00002B4AEF UPI00002B4AEF UniRef100 entry 33 1.4
UniRef100_UPI0000341DAD UPI0000341DAD UniRef100 entry 33 2.4
UniRef100_UPI000028C475 UPI000028C475 UniRef100 entry 32 4.0
>UniRef100_Q9AVH2 Putative senescence-associated protein [Pisum sativum]
Length = 282
Score = 115 bits (288), Expect = 3e-25
Identities = 55/71 (77%), Positives = 58/71 (81%), Gaps = 2/71 (2%)
Query: 8 SPNSELEALSHNPTHGSFAPLTSQTSVMTNCANQRFLFN*VE--LRHFHQ*GKTNMSHDG 65
SP+S+LEA SHNPTHGSFAPL Q S MTNCANQRFL VE LRH HQ GKTN+SHDG
Sbjct: 9 SPDSDLEAFSHNPTHGSFAPLAFQPSAMTNCANQRFLSYYVELLLRHCHQWGKTNLSHDG 68
Query: 66 LIPTHVPYWWV 76
LIP HVPYWWV
Sbjct: 69 LIPAHVPYWWV 79
>UniRef100_UPI00004289D5 UPI00004289D5 UniRef100 entry
Length = 148
Score = 50.1 bits (118), Expect = 1e-05
Identities = 23/35 (65%), Positives = 25/35 (70%)
Query: 10 NSELEALSHNPTHGSFAPLTSQTSVMTNCANQRFL 44
+S+LEA SHNPT GSFAPL Q S T C N RFL
Sbjct: 112 DSDLEAFSHNPTDGSFAPLAPQPSTYTKCLNLRFL 146
>UniRef100_UPI0000274C17 UPI0000274C17 UniRef100 entry
Length = 108
Score = 43.5 bits (101), Expect = 0.001
Identities = 20/35 (57%), Positives = 22/35 (62%)
Query: 10 NSELEALSHNPTHGSFAPLTSQTSVMTNCANQRFL 44
+S LEA HNPT GSFAP + S T C N RFL
Sbjct: 72 DSALEAFRHNPTDGSFAPSLDRVSTCTKCPNLRFL 106
>UniRef100_UPI00002352BD UPI00002352BD UniRef100 entry
Length = 198
Score = 42.0 bits (97), Expect = 0.004
Identities = 21/39 (53%), Positives = 24/39 (60%)
Query: 6 RYSPNSELEALSHNPTHGSFAPLTSQTSVMTNCANQRFL 44
R +S+LEA SH P GS A L QT+ TN NQRFL
Sbjct: 158 RSGTDSDLEAFSHYPADGSVAALPGQTAAKTNYLNQRFL 196
>UniRef100_UPI00002B4AEF UPI00002B4AEF UniRef100 entry
Length = 86
Score = 33.5 bits (75), Expect = 1.4
Identities = 13/16 (81%), Positives = 13/16 (81%)
Query: 61 MSHDGLIPTHVPYWWV 76
MSHDGL P HVPYW V
Sbjct: 1 MSHDGLNPAHVPYWRV 16
>UniRef100_UPI0000341DAD UPI0000341DAD UniRef100 entry
Length = 70
Score = 32.7 bits (73), Expect = 2.4
Identities = 12/16 (75%), Positives = 13/16 (81%)
Query: 61 MSHDGLIPTHVPYWWV 76
MSHDGL P HVPY W+
Sbjct: 1 MSHDGLNPAHVPYLWM 16
>UniRef100_UPI000028C475 UPI000028C475 UniRef100 entry
Length = 66
Score = 32.0 bits (71), Expect = 4.0
Identities = 18/40 (45%), Positives = 22/40 (55%)
Query: 1 NEYTHRYSPNSELEALSHNPTHGSFAPLTSQTSVMTNCAN 40
NE S +S+LEA S PT GS A L Q + +T AN
Sbjct: 27 NEKRCLVSMDSDLEAFSRYPTRGSVAVLAFQLAALTKYAN 66
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.332 0.139 0.486
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 117,777,548
Number of Sequences: 2790947
Number of extensions: 2962814
Number of successful extensions: 8955
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 8947
Number of HSP's gapped (non-prelim): 7
length of query: 76
length of database: 848,049,833
effective HSP length: 52
effective length of query: 24
effective length of database: 702,920,589
effective search space: 16870094136
effective search space used: 16870094136
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.5 bits)
S2: 68 (30.8 bits)
Lotus: description of TM0135.12