BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0134.14
(277 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q949K8 Gag polyprotein [Cicer arietinum] 241 1e-62
UniRef100_Q949L5 Gag polyprotein [Cicer arietinum] 174 2e-42
UniRef100_Q949L0 Putative gag polyprotein [Cicer arietinum] 105 2e-21
UniRef100_Q949L1 Putative gag polyprotein [Cicer arietinum] 101 2e-20
UniRef100_Q8RU68 Putative 22 kDa kafirin cluster; Ty3-Gypsy type... 92 1e-17
UniRef100_Q84KB1 Gag-protease polyprotein [Cucumis melo] 89 1e-16
UniRef100_Q7XH52 Putative polyprotein [Oryza sativa] 88 3e-16
UniRef100_Q7XL36 OSJNBa0056L23.21 protein [Oryza sativa] 87 4e-16
UniRef100_Q9SY43 Putative reverse transcriptase [Arabidopsis tha... 85 2e-15
UniRef100_Q7XL40 OSJNBa0056L23.17 protein [Oryza sativa] 85 2e-15
UniRef100_Q8LMG6 Putative retroelement [Oryza sativa] 84 3e-15
UniRef100_Q8LM27 Putative retroelement [Oryza sativa] 84 3e-15
UniRef100_Q7XKP3 OSJNBa0032N05.6 protein [Oryza sativa] 84 4e-15
UniRef100_Q9SJ92 Putative retroelement pol polyprotein [Arabidop... 84 4e-15
UniRef100_Q850X5 Putative polyprotein [Oryza sativa] 84 4e-15
UniRef100_Q7XS94 OSJNBa0074B10.6 protein [Oryza sativa] 83 7e-15
UniRef100_Q7X891 OSJNBb0016B03.11 protein [Oryza sativa] 83 9e-15
UniRef100_Q7XWI0 OSJNBa0085C10.14 protein [Oryza sativa] 82 1e-14
UniRef100_Q6F2Z8 Hypothetical protein P0483D07.14 [Oryza sativa] 82 1e-14
UniRef100_Q8L410 P0496H05.11 protein [Oryza sativa] 82 2e-14
>UniRef100_Q949K8 Gag polyprotein [Cicer arietinum]
Length = 277
Score = 241 bits (616), Expect = 1e-62
Identities = 130/258 (50%), Positives = 172/258 (66%), Gaps = 14/258 (5%)
Query: 8 SNQLAEMVATLVQAMTVQTNDNAHRRATEDTRELHRLQREVALDQNRGLNDFRRQDPPKF 67
++Q+AE + + ++ QT A + R+L + RE+ ++RGL DFRR +PPKF
Sbjct: 15 NDQMAEAMNNMAASVAAQT-------AAKTQRDLEKRGREIRAAESRGLVDFRRYNPPKF 67
Query: 68 TGGTDPDNADL*IQEIEKIFEVLQTAEGAKVSLATYLLLGDAEYWWKGTRGIMRANHEEV 127
G + AD IQE+EKIF+++ G KVS ATY+LLGDAEYWW+ R +M A HEEV
Sbjct: 68 KGDEGSEKADQWIQEVEKIFDMINCQAGVKVSYATYMLLGDAEYWWRSARLLMGAAHEEV 127
Query: 128 N*NSFRTAFLEKYFPTSARDEREAQFLTLGQGSMTVPEYASKLESLAKHFQFFNNHVDER 187
N SF+ FL+KYFP S R + FL L QGS+TV EYA+K ESL++HF+FF +DE
Sbjct: 128 NWESFKRKFLDKYFPMSTRTKLGDDFLKLHQGSLTVGEYAAKFESLSRHFRFFREEIDEP 187
Query: 188 YMCKRFLNGLRADIKDSVRPLGIIRFQALVEKATEVELMKNRRMNGAG---TGGPMRSSS 244
+MC RF +GL+ +I+DSV PLGI RFQALVEK EVE MKN+R + G +GGP R++
Sbjct: 188 FMCHRFQDGLKYEIQDSVLPLGIQRFQALVEKCREVEDMKNKRASRVGNFNSGGPSRATY 247
Query: 245 QDNLGKGRFQMKKPYQRP 262
Q N GK Q+ KPY RP
Sbjct: 248 Q-NRGK---QVAKPYNRP 261
>UniRef100_Q949L5 Gag polyprotein [Cicer arietinum]
Length = 209
Score = 174 bits (442), Expect = 2e-42
Identities = 93/205 (45%), Positives = 128/205 (62%), Gaps = 7/205 (3%)
Query: 4 NMVNSNQLAEMVATLVQAMTVQTNDNAHRRATEDTRELHRLQREVALDQNRGLNDFRRQD 63
N ++Q+AE + + ++ QT A + R+L + RE+ ++RGL DFRR +
Sbjct: 12 NANRNDQMAEAMNNMAASVAAQT-------AAKTQRDLEKRGREIRAAESRGLEDFRRYN 64
Query: 64 PPKFTGGTDPDNADL*IQEIEKIFEVLQTAEGAKVSLATYLLLGDAEYWWKGTRGIMRAN 123
PPKF G + AD IQE+EKI ++++ G VS ATY+LLGDAEYW + R +M A
Sbjct: 65 PPKFKGDESSEKADQWIQEVEKIIDMIKCQAGVTVSYATYMLLGDAEYWRRSGRLLMGAA 124
Query: 124 HEEVN*NSFRTAFLEKYFPTSARDEREAQFLTLGQGSMTVPEYASKLESLAKHFQFFNNH 183
HEEVN SF+ FL+KYFP S R + FL L QGSMTV EYA+K SL++HF+F
Sbjct: 125 HEEVNWESFKRKFLDKYFPMSTRTKLGDDFLKLHQGSMTVGEYAAKFGSLSRHFRFVREE 184
Query: 184 VDERYMCKRFLNGLRADIKDSVRPL 208
DE +M F +GL+ +I+DSV PL
Sbjct: 185 TDEPFMIHCFQDGLKYEIQDSVLPL 209
>UniRef100_Q949L0 Putative gag polyprotein [Cicer arietinum]
Length = 115
Score = 105 bits (261), Expect = 2e-21
Identities = 60/115 (52%), Positives = 77/115 (66%), Gaps = 9/115 (7%)
Query: 163 VPEYASKLESLAKHFQFFNNHVDERYMCKRFLNGLRADIKDSVRPLGIIRFQALVEKATE 222
V EYA+K ESL++HF+FF +DE +MC RF +GL+ +I+DSV PLGI RFQALVEK +
Sbjct: 1 VGEYAAKFESLSRHFRFFREEIDEPFMCHRFQDGLKYEIQDSVLPLGIQRFQALVEKCRK 60
Query: 223 VELMKNRRMNGAG---TGGPMRSSSQDNLGKGRFQMKKPYQRPMGEGYTLGQYKP 274
VE MKN+R + G +GGP R + Q N GK Q+ KPY RP GQ +P
Sbjct: 61 VEDMKNKRASRVGNFNSGGPSRVNYQ-NKGK---QVAKPYNRPQNNNG--GQSRP 109
>UniRef100_Q949L1 Putative gag polyprotein [Cicer arietinum]
Length = 116
Score = 101 bits (252), Expect = 2e-20
Identities = 60/115 (52%), Positives = 76/115 (65%), Gaps = 9/115 (7%)
Query: 163 VPEYASKLESLAKHFQFFNNHVDERYMCKRFLNGLRADIKDSVRPLGIIRFQALVEKATE 222
V EYA+K ESL++HF+FF E +MC RF +GL+ +I+DSV PLGI RFQALVEK E
Sbjct: 1 VGEYAAKFESLSRHFRFFREKDYEPFMCHRFQDGLKYEIQDSVLPLGIQRFQALVEKCRE 60
Query: 223 VELMKNRRMNGAG---TGGPMRSSSQDNLGKGRFQMKKPYQRPMGEGYTLGQYKP 274
VE MKN+R + G +GGP R++ Q N GK Q+ KPY RP GQ +P
Sbjct: 61 VEDMKNKRASRVGNFNSGGPSRANYQ-NRGK---QVAKPYNRPQNNNG--GQSRP 109
>UniRef100_Q8RU68 Putative 22 kDa kafirin cluster; Ty3-Gypsy type [Oryza sativa]
Length = 1230
Score = 92.0 bits (227), Expect = 1e-17
Identities = 67/229 (29%), Positives = 108/229 (46%), Gaps = 5/229 (2%)
Query: 39 RELHRLQREVALDQNR-GLNDFRRQDPPKFTGGTDPDNADL*IQEIEKIFEVLQTAEGAK 97
R++ L+R D NR GL +F++ PP F+G +P A+ I +EK FE + + K
Sbjct: 53 RQMEILERITKSDANRNGLGEFQKLKPPTFSGTANPLEAEEWIVAMEKSFEAMGCTDKEK 112
Query: 98 VSLATYLLLGDAEYWWKGTRGIMRANHEEVN*NSFRTAFLEKYFPTSARDEREAQFLTLG 157
+ ATY+L A WW + + + F+ AF +KYFP S + +E +FL L
Sbjct: 113 IIYATYMLQSSAFEWWDAHKK-SYSERIFITWELFKEAFYKKYFPESVKRMKEKEFLELK 171
Query: 158 QGSMTVPEYASKLESLAKHFQFFNNHVDERYMCKRFLNGLRADIKDSVRPLGIIRFQALV 217
QG+ +V EY + LA+ F + +RF +GLR +K V + F+ +V
Sbjct: 172 QGNKSVAEYEIEFSRLARFAPEFVQ--TDGSKARRFESGLRQPLKRRVEAFELTIFREVV 229
Query: 218 EKATEVEL-MKNRRMNGAGTGGPMRSSSQDNLGKGRFQMKKPYQRPMGE 265
KA +E +R+ ++++ N G+ R QR E
Sbjct: 230 SKAQLLEKGYHEQRIEHGQPQKKFKTNNPQNQGRFRGNYSGQMQRKSSE 278
>UniRef100_Q84KB1 Gag-protease polyprotein [Cucumis melo]
Length = 429
Score = 89.0 bits (219), Expect = 1e-16
Identities = 55/191 (28%), Positives = 90/191 (46%), Gaps = 5/191 (2%)
Query: 56 LNDFRRQDPPKFTGGT-DPDNADL*IQEIEKIFEVLQTAEGAKVSLATYLLLGDAEYWWK 114
L DFR+ +P F G DP A + + +E IF ++ E KV A ++L WW+
Sbjct: 60 LRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWE 119
Query: 115 GTRGIMRANHEEVN*NSFRTAFLEKYFPTSARDEREAQFLTLGQGSMTVPEYASKLESLA 174
T ++ + ++ F+ +F K+F S RD + +FL L QG MTV +Y ++ + L+
Sbjct: 120 TTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLS 179
Query: 175 KHFQFFNNHVDERYMCKRFLNGLRADIKDSVRPLGIIRFQALVEKATEVELMKNRRMNGA 234
+ E +F+ GLR DI+ VR + A ++ L + R N +
Sbjct: 180 RFAP--EMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQE--RANSS 235
Query: 235 GTGGPMRSSSQ 245
T G +S Q
Sbjct: 236 KTAGRGSTSGQ 246
>UniRef100_Q7XH52 Putative polyprotein [Oryza sativa]
Length = 371
Score = 87.8 bits (216), Expect = 3e-16
Identities = 75/255 (29%), Positives = 118/255 (45%), Gaps = 11/255 (4%)
Query: 17 TLVQAMTVQTNDNAHRRATEDTRELHRLQREVALDQNRGLNDFRRQDPPKFTGGTDPDNA 76
TL Q + QT + + +L++ QN+ L DF R PP F+ T+P A
Sbjct: 19 TLAQVLAQQTQ-LMNMMIQQMQNQLNQGNNNAPPPQNK-LADFLRVRPPTFSSTTNPVEA 76
Query: 77 DL*IQEIEKIFEVLQTAEGAKVSLATYLLLGDAEYWWKGTRGIMRANHEEVN*NSFRTAF 136
+ +EK E+LQ + KV A++ L G A WW R + RA + + F AF
Sbjct: 77 GDWLHAVEKKLELLQCTDQEKVVFASHQLQGPASEWWDHFR-MNRAEGQPITWADFTEAF 135
Query: 137 LEKYFPTSARDEREAQFLTLGQGSMTVPEYASKLESLAKHFQFFNNHVDERYMCKRFLNG 196
+ + PT ++ +F L Q TV EY + LA++ +ER ++FL G
Sbjct: 136 EKTHIPTGVVSLKKREFRALKQRDHTVAEYLHEFNRLARYAPEDVRTDEERQ--EKFLEG 193
Query: 197 LRADIKDSVRPLGIIRFQALVEKATEVELMKNRRMNGAGTGGPMRSSSQDNLGKGRFQMK 256
L+ ++ ++ + FQ LV+KA +E KNR N + Q+ G + Q
Sbjct: 194 LKDELSVTLISHDYVDFQQLVDKAIRLEDKKNRMDNRK----RKMTVFQEAQGSSQRQRI 249
Query: 257 KPYQRPMGEGYTLGQ 271
KP Q +GE ++ GQ
Sbjct: 250 KPLQ--IGESFSTGQ 262
>UniRef100_Q7XL36 OSJNBa0056L23.21 protein [Oryza sativa]
Length = 449
Score = 87.4 bits (215), Expect = 4e-16
Identities = 82/275 (29%), Positives = 124/275 (44%), Gaps = 17/275 (6%)
Query: 3 QNMVNS------NQLAEMVATLVQAMTVQTNDNAHRRATEDTRELHRLQREVALDQNRGL 56
Q MVN+ N E TL Q + QT + + +L++ QN+ L
Sbjct: 79 QMMVNTRASGSGNNNNEDNPTLAQVLAQQTQ-LMNMMIQQMQNQLNQGNNNAPPPQNK-L 136
Query: 57 NDFRRQDPPKFTGGTDPDNADL*IQEIEKIFEVLQTAEGAKVSLATYLLLGDAEYWWKGT 116
DF R PP F+ T+P A + IEK E+LQ + KV A++ L G A WW
Sbjct: 137 ADFLRVRPPTFSSTTNPVEAGDWLHAIEKKLELLQCTDQEKVVFASHQLQGPASEWWDHF 196
Query: 117 RGIMRANHEEVN*NSFRTAFLEKYFPTSARDEREAQFLTLGQGSMTVPEYASKLESLAKH 176
R + RA + + F AF + + PT ++ +F L Q TV EY + LA++
Sbjct: 197 R-MNRAEGQPITWVEFTEAFKKTHIPTGVVSLKKREFRALKQKDQTVAEYLHEFNRLARY 255
Query: 177 FQFFNNHVDERYMCKRFLNGLRADIKDSVRPLGIIRFQALVEKATEVELMKNRRMNGAGT 236
+ER ++FL GL+ ++ ++ + FQ LV+KA +E KNR N
Sbjct: 256 APEDVRTDEERQ--EKFLEGLKDELSVTLISHDYVDFQQLVDKAIRLEDKKNRMDNRK-- 311
Query: 237 GGPMRSSSQDNLGKGRFQMKKPYQRPMGEGYTLGQ 271
+ Q+ G + Q KP Q +GE + GQ
Sbjct: 312 --RKMTVFQEAQGSSQRQRIKPLQ--IGESSSAGQ 342
>UniRef100_Q9SY43 Putative reverse transcriptase [Arabidopsis thaliana]
Length = 839
Score = 85.1 bits (209), Expect = 2e-15
Identities = 59/194 (30%), Positives = 87/194 (44%), Gaps = 4/194 (2%)
Query: 54 RGLNDFRRQDPPKFTGGTDPDNADL*IQEIEKIFEVLQTAEGAKVSLATYLLLGDAEYWW 113
R + +R F+GGT P+ AD ++E+ F + +V L + L GDA WW
Sbjct: 143 RMMKQLQRIGTEYFSGGTSPEEADSWRSQVERNFGSSRCPAEYRVDLTVHFLEGDAHLWW 202
Query: 114 KGTRGIMRANHEEVN*NSFRTAFLEKYFPTSARDEREAQFLTLGQGSMTVPEYASKLESL 173
+ R +++ F F KYFP A D EA+FL L QG +V EY K L
Sbjct: 203 RSVTA--RRRQADMSWADFMAEFNAKYFPREALDRMEARFLELTQGVRSVREYDRKFNRL 260
Query: 174 AKHFQFFNNHVDERYMCKRFLNGLRADIKDSVRPLGIIRFQALVEKATEVELMKNRRMNG 233
+ D++ +RFL GLR +++ R ALVE A EVE R++ G
Sbjct: 261 LVYAG--RGMEDDQAQMRRFLRGLRPNLRVRCRVSQYATKAALVETAAEVEEDLQRQVVG 318
Query: 234 AGTGGPMRSSSQDN 247
+ + Q +
Sbjct: 319 VSPAVQPKKTQQQH 332
>UniRef100_Q7XL40 OSJNBa0056L23.17 protein [Oryza sativa]
Length = 963
Score = 84.7 bits (208), Expect = 2e-15
Identities = 67/214 (31%), Positives = 101/214 (46%), Gaps = 5/214 (2%)
Query: 17 TLVQAMTVQTN-DNAHRRATEDTRELHRLQREVALDQNRGLNDFRRQDPPKFTGGTDPDN 75
TL Q + QT N + ++ + ++ Q QN+ L DF R PP F+ T+P
Sbjct: 188 TLAQILAQQTQLINLLVQQAQNQQANNQNQNPPPPPQNK-LADFLRVSPPTFSSTTNPVE 246
Query: 76 ADL*IQEIEKIFEVLQTAEGAKVSLATYLLLGDAEYWWKGTRGIMRANHEEVN*NSFRTA 135
A + +EK +++Q E KVS A++ L G A WW R RA E + F TA
Sbjct: 247 AGDWLHAVEKKLDLIQCTEQEKVSFASHQLHGPAAEWWDHFRQ-GRAGGEPITWQEFTTA 305
Query: 136 FLEKYFPTSARDEREAQFLTLGQGSMTVPEYASKLESLAKHFQFFNNHVDERYMCKRFLN 195
F + + PT ++ +F L QGS +V EY LA++ +ER ++FL
Sbjct: 306 FKKTHIPTGVVALKKREFRALNQGSRSVTEYLHDFNRLARYAPEDVRTDEERQ--EKFLE 363
Query: 196 GLRADIKDSVRPLGIIRFQALVEKATEVELMKNR 229
GL ++ ++ FQ LV+KA E NR
Sbjct: 364 GLNDELSYALMSTDFRDFQQLVDKAIRQEDKYNR 397
>UniRef100_Q8LMG6 Putative retroelement [Oryza sativa]
Length = 371
Score = 84.3 bits (207), Expect = 3e-15
Identities = 75/255 (29%), Positives = 116/255 (45%), Gaps = 11/255 (4%)
Query: 17 TLVQAMTVQTNDNAHRRATEDTRELHRLQREVALDQNRGLNDFRRQDPPKFTGGTDPDNA 76
TL Q + QT + + +L++ QN+ L DF R PP F+ T+P A
Sbjct: 19 TLAQVLAQQTQ-LMNMMIQQMQNQLNQGNNNAPPPQNK-LADFLRVRPPTFSSTTNPVEA 76
Query: 77 DL*IQEIEKIFEVLQTAEGAKVSLATYLLLGDAEYWWKGTRGIMRANHEEVN*NSFRTAF 136
+ I K E+LQ + KV A++ L G A WW R + RA + + F AF
Sbjct: 77 GDWLHAIGKKLELLQCTDQEKVVFASHQLQGPASEWWDHFR-MNRAEGQPITWADFTEAF 135
Query: 137 LEKYFPTSARDEREAQFLTLGQGSMTVPEYASKLESLAKHFQFFNNHVDERYMCKRFLNG 196
+ + PT ++ +F L Q TV EY + LA++ +ER ++FL G
Sbjct: 136 KKTHIPTGVVSLKKREFRALKQKDQTVAEYLHEFNRLARYAPEDVRTDEERQ--EKFLEG 193
Query: 197 LRADIKDSVRPLGIIRFQALVEKATEVELMKNRRMNGAGTGGPMRSSSQDNLGKGRFQMK 256
L+ ++ ++ FQ LV+KA +E KNR N + Q+ G + Q
Sbjct: 194 LKDELSVTLISHDYADFQQLVDKAIRLEDKKNRMDNRK----RKMTVFQEAQGSSQRQRI 249
Query: 257 KPYQRPMGEGYTLGQ 271
KP Q +GE ++ GQ
Sbjct: 250 KPLQ--IGEPFSAGQ 262
>UniRef100_Q8LM27 Putative retroelement [Oryza sativa]
Length = 371
Score = 84.3 bits (207), Expect = 3e-15
Identities = 71/226 (31%), Positives = 107/226 (46%), Gaps = 10/226 (4%)
Query: 52 QNRGLNDFRRQDPPKFTGGTDPDNADL*IQEIEKIFEVLQTAEGAKVSLATYLLLGDAEY 111
QN+ L DF R PP F+ T+P A + +EK E+LQ + KV A++ L G A
Sbjct: 53 QNK-LADFLRVRPPTFSITTNPVEAGDWLHAVEKKLELLQCTDQEKVVFASHQLQGPASE 111
Query: 112 WWKGTRGIMRANHEEVN*NSFRTAFLEKYFPTSARDEREAQFLTLGQGSMTVPEYASKLE 171
WW R + RA + + F AF + + P ++ +F L Q TV EY +
Sbjct: 112 WWDHFR-MNRAEGQPITWAEFTEAFKKTHIPAGVVALKKREFRALKQKDRTVTEYLHEFN 170
Query: 172 SLAKHFQFFNNHVDERYMCKRFLNGLRADIKDSVRPLGIIRFQALVEKATEVELMKNRRM 231
LA++ +ER ++FL GL+ ++ + FQ LV+KA +E KN RM
Sbjct: 171 RLARYAPEDVRTDEERQ--EKFLEGLKDEVSVMLISHDYEDFQGLVDKAIRLEDKKN-RM 227
Query: 232 NGAGTGGPMRSSSQDNLGKGRFQMKKPYQRPMGEGYTLGQYKPMTL 277
+ G R Q+ G + Q KP Q +GE ++ GQ + L
Sbjct: 228 DNRKRG---RIVFQETQGSSQRQRIKPLQ--LGESFSAGQEQSQQL 268
>UniRef100_Q7XKP3 OSJNBa0032N05.6 protein [Oryza sativa]
Length = 371
Score = 84.0 bits (206), Expect = 4e-15
Identities = 69/220 (31%), Positives = 106/220 (47%), Gaps = 10/220 (4%)
Query: 52 QNRGLNDFRRQDPPKFTGGTDPDNADL*IQEIEKIFEVLQTAEGAKVSLATYLLLGDAEY 111
QN+ L DF R PP F+ T+P A + +EK E+LQ + KV A++ L G A
Sbjct: 53 QNK-LADFLRVRPPTFSSTTNPVEAGDWLHAVEKKLELLQCTDQKKVVFASHQLQGSASE 111
Query: 112 WWKGTRGIMRANHEEVN*NSFRTAFLEKYFPTSARDEREAQFLTLGQGSMTVPEYASKLE 171
WW R + RA + + F AF + + P ++ +F L Q TV EY +
Sbjct: 112 WWDHIR-MNRAEGQPITWAEFTEAFKKTHIPAGVVALKKREFRALKQKDHTVAEYLHEFN 170
Query: 172 SLAKHFQFFNNHVDERYMCKRFLNGLRADIKDSVRPLGIIRFQALVEKATEVELMKNRRM 231
LA++ +ER ++FL GL+ ++ + FQ LV+KA +E KN RM
Sbjct: 171 RLARYAPEDVRTDEERQ--EKFLEGLKDELSVMLISHDYEDFQELVDKAIRLEDKKN-RM 227
Query: 232 NGAGTGGPMRSSSQDNLGKGRFQMKKPYQRPMGEGYTLGQ 271
+ G + +QD+ + R KP Q +GE ++ GQ
Sbjct: 228 DNRKRGRIVFQEAQDSSQRQRI---KPLQ--IGESFSTGQ 262
>UniRef100_Q9SJ92 Putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1411
Score = 84.0 bits (206), Expect = 4e-15
Identities = 63/212 (29%), Positives = 93/212 (43%), Gaps = 10/212 (4%)
Query: 67 FTGGTDPDNADL*IQEIEKIFEVLQTAEGAKVSLATYLLLGDAEYWWKGTRGIMRANHEE 126
F+ GT P+ AD +++ F + +V LA + L GDA WW+ R +
Sbjct: 138 FSSGTSPEEADSWRSRVQRNFGSSRCPAEYRVDLAVHFLEGDAHLWWRSVTA--RRRQAD 195
Query: 127 VN*NSFRTAFLEKYFPTSARDEREAQFLTLGQGSMTVPEYASKLESLAKHFQFFNNHVDE 186
++ F F KYFP A D EA+FL L QG +V EY + L + D+
Sbjct: 196 MSWADFVAEFNAKYFPQEALDRMEARFLELTQGEWSVREYDREFNRLLAYAG--RGMEDD 253
Query: 187 RYMCKRFLNGLRADIKDSVRPLGIIRFQALVEKATEVELMKNRRMNGAGTGGPMRSSSQ- 245
+ +RFL GLR D++ R ALVE A EVE R++ G +++ Q
Sbjct: 254 QAQMRRFLRGLRPDLRVQCRVSQYATKAALVETAAEVEEDLQRQVVGVSPAVQTKNTQQQ 313
Query: 246 ---DNLGKGRFQMKKPYQRP--MGEGYTLGQY 272
GK K+ + P G+G G +
Sbjct: 314 VTPSKGGKPAQGQKRKWDHPSRAGQGGRAGYF 345
>UniRef100_Q850X5 Putative polyprotein [Oryza sativa]
Length = 371
Score = 84.0 bits (206), Expect = 4e-15
Identities = 69/220 (31%), Positives = 105/220 (47%), Gaps = 10/220 (4%)
Query: 52 QNRGLNDFRRQDPPKFTGGTDPDNADL*IQEIEKIFEVLQTAEGAKVSLATYLLLGDAEY 111
QN+ L DF R PP F+ T+P A + IEK E+LQ + KV A++ L G A
Sbjct: 53 QNK-LADFLRVRPPTFSSTTNPVEAGDWLHTIEKKLELLQCTDQEKVVFASHQLQGPASE 111
Query: 112 WWKGTRGIMRANHEEVN*NSFRTAFLEKYFPTSARDEREAQFLTLGQGSMTVPEYASKLE 171
WW R + RA + + F AF + + P ++ +F TL Q TV EY +
Sbjct: 112 WWDHFR-MNRAEGQPITWVEFTEAFKKTHIPVGVVSLKKREFRTLKQKDHTVAEYLHEFN 170
Query: 172 SLAKHFQFFNNHVDERYMCKRFLNGLRADIKDSVRPLGIIRFQALVEKATEVELMKNRRM 231
LA++ +ER ++FL GL+ ++ ++ + FQ LV+KA +E KNR
Sbjct: 171 RLARYAPEDVRTDEERQ--EKFLEGLKDELSVTLISHDYVDFQQLVDKAIRLEDKKNRMD 228
Query: 232 NGAGTGGPMRSSSQDNLGKGRFQMKKPYQRPMGEGYTLGQ 271
N + Q+ G + Q +P Q +GE + GQ
Sbjct: 229 NRK----RRMTVFQEAQGSSQRQHIRPLQ--IGESSSAGQ 262
>UniRef100_Q7XS94 OSJNBa0074B10.6 protein [Oryza sativa]
Length = 1447
Score = 83.2 bits (204), Expect = 7e-15
Identities = 73/255 (28%), Positives = 112/255 (43%), Gaps = 11/255 (4%)
Query: 17 TLVQAMTVQTN-DNAHRRATEDTRELHRLQREVALDQNRGLNDFRRQDPPKFTGGTDPDN 75
TL Q + QT N + ++ + ++ Q QN+ L DF R PP F+ T+P
Sbjct: 20 TLAQILAQQTQLINLLVQQAQNQQANNQNQNPPPPPQNK-LADFLRVRPPTFSSTTNPVE 78
Query: 76 ADL*IQEIEKIFEVLQTAEGAKVSLATYLLLGDAEYWWKGTRGIMRANHEEVN*NSFRTA 135
A + +EK +++Q E KVS A++ L G A WW R RA E + F A
Sbjct: 79 AGDWLHAVEKKLDLIQCTEQEKVSFASHQLHGPAAEWWDHFRQ-GRAEGEPITWQEFTAA 137
Query: 136 FLEKYFPTSARDEREAQFLTLGQGSMTVPEYASKLESLAKHFQFFNNHVDERYMCKRFLN 195
F + + P ++ +F L QGS +V EY LA++ +ER ++FL
Sbjct: 138 FKKTHIPAGVVALKKREFRALNQGSRSVTEYLHDFNRLARYAPEDVRTDEERQ--EKFLE 195
Query: 196 GLRADIKDSVRPLGIIRFQALVEKATEVELMKNRRMNGAGTGGPMRSSSQDNLGKGRFQM 255
GL ++ ++ FQ LV+KA E NR MR ++Q +G Q
Sbjct: 196 GLNDELSYALMSTDFWDFQQLVDKAIRQEDKYNRMEQ------KMRRAAQFKAQQGSNQR 249
Query: 256 KKPYQRPMGEGYTLG 270
+ P Y+ G
Sbjct: 250 PRLVTGPQAPSYSQG 264
>UniRef100_Q7X891 OSJNBb0016B03.11 protein [Oryza sativa]
Length = 1374
Score = 82.8 bits (203), Expect = 9e-15
Identities = 59/198 (29%), Positives = 97/198 (48%), Gaps = 12/198 (6%)
Query: 36 EDTRELHRLQREVALDQNRGLN---------DFRRQDPPKFTGGTDPDNADL*IQEIEKI 86
+ T+ +H + +++ QN+G N +F R PP F+ T+P A + IEK
Sbjct: 33 QQTQLMHMMMQQLQNQQNQGNNHAPPQNKLAEFLRVRPPVFSSTTNPVEAGDWLHAIEKK 92
Query: 87 FEVLQTAEGAKVSLATYLLLGDAEYWWKGTRGIMRANHEEVN*NSFRTAFLEKYFPTSAR 146
++LQ + KVS A++ L G A WW R + R N E + F AF + + P+
Sbjct: 93 LDLLQCTDQEKVSFASHQLHGPASEWWDHFR-LNRINAEPITWLEFTAAFRKTHIPSGVV 151
Query: 147 DEREAQFLTLGQGSMTVPEYASKLESLAKHFQFFNNHVDERYMCKRFLNGLRADIKDSVR 206
++ +F +L QGS +V EY + LA++ + +ER ++FL GL ++ +
Sbjct: 152 SLKKKEFRSLTQGSRSVTEYLHEFNRLARYAPEDVRNDEERQ--EKFLGGLNDELSYPLM 209
Query: 207 PLGIIRFQALVEKATEVE 224
FQ LV+KA E
Sbjct: 210 VGDYPDFQKLVDKAIRQE 227
>UniRef100_Q7XWI0 OSJNBa0085C10.14 protein [Oryza sativa]
Length = 369
Score = 82.4 bits (202), Expect = 1e-14
Identities = 70/226 (30%), Positives = 107/226 (46%), Gaps = 10/226 (4%)
Query: 52 QNRGLNDFRRQDPPKFTGGTDPDNADL*IQEIEKIFEVLQTAEGAKVSLATYLLLGDAEY 111
QN+ L DF R PP F+ T+P A + +E+ E+LQ + KV A++ L G A
Sbjct: 53 QNK-LADFLRVRPPTFSSTTNPVEAGDWLHAVEEKLELLQCTDQDKVVFASHQLQGSASE 111
Query: 112 WWKGTRGIMRANHEEVN*NSFRTAFLEKYFPTSARDEREAQFLTLGQGSMTVPEYASKLE 171
WW R + RA + + F AF + + P ++ +F L Q TV EY +
Sbjct: 112 WWDHFR-MNRAEGQPITWAEFTEAFKKTHIPAGVVALKKREFRALKQKDRTVTEYLHEFN 170
Query: 172 SLAKHFQFFNNHVDERYMCKRFLNGLRADIKDSVRPLGIIRFQALVEKATEVELMKNRRM 231
LA++ +ER ++FL GL+ ++ + FQ LV+KA +E KN RM
Sbjct: 171 RLARYAPEDVRTDEERQ--EKFLEGLKDELSVMLISHDYEDFQELVDKAIRLEDKKN-RM 227
Query: 232 NGAGTGGPMRSSSQDNLGKGRFQMKKPYQRPMGEGYTLGQYKPMTL 277
+ G R Q+ G + Q KP Q +GE ++ GQ + L
Sbjct: 228 DNRKRG---RIVFQEAQGSSQRQRIKPLQ--IGESFSAGQEQSQQL 268
>UniRef100_Q6F2Z8 Hypothetical protein P0483D07.14 [Oryza sativa]
Length = 371
Score = 82.4 bits (202), Expect = 1e-14
Identities = 75/255 (29%), Positives = 115/255 (44%), Gaps = 11/255 (4%)
Query: 17 TLVQAMTVQTNDNAHRRATEDTRELHRLQREVALDQNRGLNDFRRQDPPKFTGGTDPDNA 76
TL Q + QT + + +L++ QN+ L DF R PP F+ T+P A
Sbjct: 19 TLAQVLAQQTQ-LMNMMIQQMQNQLNQGNNNAPPPQNK-LADFLRVRPPTFSSTTNPVEA 76
Query: 77 DL*IQEIEKIFEVLQTAEGAKVSLATYLLLGDAEYWWKGTRGIMRANHEEVN*NSFRTAF 136
+ IEK E+LQ + KV A++ L G A WW R + RA + + F AF
Sbjct: 77 GDWLHAIEKKLELLQCTDQEKVVFASHQLQGPASEWWDHFR-MNRAEGQPITWAEFTEAF 135
Query: 137 LEKYFPTSARDEREAQFLTLGQGSMTVPEYASKLESLAKHFQFFNNHVDERYMCKRFLNG 196
+ + P ++ +F L Q TV EY + LA++ +ER ++FL G
Sbjct: 136 KKTHIPAGVVALKKREFRALKQKDRTVTEYLHEFNRLARYAPEDVRTDEERQ--EKFLEG 193
Query: 197 LRADIKDSVRPLGIIRFQALVEKATEVELMKNRRMNGAGTGGPMRSSSQDNLGKGRFQMK 256
L+ ++ + FQ LV+KA +E KNR N + Q+ G + Q
Sbjct: 194 LKDELSVMLISHDYEDFQELVDKAIRLEDKKNRMDNRK----RKMTVFQEAQGSSQRQRI 249
Query: 257 KPYQRPMGEGYTLGQ 271
KP Q +GE ++ GQ
Sbjct: 250 KPLQ--IGEPFSAGQ 262
>UniRef100_Q8L410 P0496H05.11 protein [Oryza sativa]
Length = 369
Score = 82.0 bits (201), Expect = 2e-14
Identities = 69/220 (31%), Positives = 103/220 (46%), Gaps = 10/220 (4%)
Query: 52 QNRGLNDFRRQDPPKFTGGTDPDNADL*IQEIEKIFEVLQTAEGAKVSLATYLLLGDAEY 111
QN+ L DF R PP F+ T+P A + IEK E+LQ + KV A++ L G A
Sbjct: 53 QNK-LTDFLRVRPPTFSSTTNPVEAGDWLHAIEKKLELLQCTDQEKVVFASHQLQGPASE 111
Query: 112 WWKGTRGIMRANHEEVN*NSFRTAFLEKYFPTSARDEREAQFLTLGQGSMTVPEYASKLE 171
WW R + RA + + F AF + + P ++ +F L Q TV EY +
Sbjct: 112 WWDHFR-MNRAEGQPITWAEFTEAFKKTHIPAGVVALKKREFRALKQKDRTVMEYLHEFN 170
Query: 172 SLAKHFQFFNNHVDERYMCKRFLNGLRADIKDSVRPLGIIRFQALVEKATEVELMKNRRM 231
LA++ +ER ++FL GL+ ++ + FQ LV+KA +E KNR
Sbjct: 171 RLARYAPEDVRTDEERQ--EKFLEGLKDELSVMLISHDYEDFQELVDKAIRLEDKKNRMD 228
Query: 232 NGAGTGGPMRSSSQDNLGKGRFQMKKPYQRPMGEGYTLGQ 271
N + Q+ G + Q KP Q +GE ++ GQ
Sbjct: 229 NRK----RRMTVFQEAQGSSQRQCIKPLQ--IGEPFSAGQ 262
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.324 0.138 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 434,006,561
Number of Sequences: 2790947
Number of extensions: 17514472
Number of successful extensions: 44367
Number of sequences better than 10.0: 482
Number of HSP's better than 10.0 without gapping: 294
Number of HSP's successfully gapped in prelim test: 188
Number of HSP's that attempted gapping in prelim test: 43680
Number of HSP's gapped (non-prelim): 504
length of query: 277
length of database: 848,049,833
effective HSP length: 126
effective length of query: 151
effective length of database: 496,390,511
effective search space: 74954967161
effective search space used: 74954967161
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 74 (33.1 bits)
Lotus: description of TM0134.14