BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0127a.6
(105 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q9XIQ7 F13O11.19 protein [Arabidopsis thaliana] 104 4e-22
UniRef100_Q8GZ34 Hypothetical protein At1g64890/F13O11_19 [Arabi... 104 4e-22
UniRef100_Q94AI3 Hypothetical protein At1g64890 [Arabidopsis tha... 104 4e-22
UniRef100_Q6I5Y4 Hypothetical protein OJ1562_H01.1 [Oryza sativa] 100 1e-20
UniRef100_Q8GYA1 Hypothetical protein At1g04570/T1G11_17 [Arabid... 95 4e-19
UniRef100_O23028 T1G11.18 protein [Arabidopsis thaliana] 95 4e-19
UniRef100_Q8RWQ5 AT5g54860/MBG8_12 [Arabidopsis thaliana] 64 1e-09
UniRef100_Q9SKZ5 Expressed protein [Arabidopsis thaliana] 54 9e-07
UniRef100_Q8YPB3 All4285 protein [Anabaena sp.] 54 1e-06
UniRef100_Q6ZA55 Putative integral membrane protein [Oryza sativa] 53 2e-06
UniRef100_O68867 Hypothetical protein [Synechococcus sp.] 53 2e-06
UniRef100_Q8DMU5 Tll0016 protein [Synechococcus elongatus] 52 3e-06
UniRef100_UPI000034A4DC UPI000034A4DC UniRef100 entry 49 4e-05
UniRef100_Q9FFU4 Similarity to integral membrane protein [Arabid... 47 8e-05
UniRef100_Q55721 Integral membrane protein [Synechocystis sp.] 46 2e-04
UniRef100_UPI00002DD8A9 UPI00002DD8A9 UniRef100 entry 45 4e-04
UniRef100_Q5SMV1 Integral membrane transporter-like protein [Ory... 43 0.002
UniRef100_Q84TJ6 Putative membrane protein [Arabidopsis thaliana] 41 0.006
UniRef100_O22780 Hypothetical protein At2g33280 [Arabidopsis tha... 40 0.010
UniRef100_Q7XU79 OSJNBa0029H02.6 protein [Oryza sativa] 40 0.013
>UniRef100_Q9XIQ7 F13O11.19 protein [Arabidopsis thaliana]
Length = 442
Score = 104 bits (260), Expect = 4e-22
Identities = 48/68 (70%), Positives = 55/68 (80%)
Query: 2 GYWVQGFRCFPWLAVSFFLKDGLNVAPSTLQLLQNSANLPMVGTPLYAVVSDSVYISGQH 61
G++VQGFR FPWL +FFL + L V PS LQLLQNSANLPMV P+Y VVSDSVY GQH
Sbjct: 26 GFFVQGFRGFPWLGANFFLTEQLRVNPSVLQLLQNSANLPMVAKPIYGVVSDSVYFFGQH 85
Query: 62 RVPYIAIG 69
R+PYIA+G
Sbjct: 86 RIPYIAVG 93
>UniRef100_Q8GZ34 Hypothetical protein At1g64890/F13O11_19 [Arabidopsis thaliana]
Length = 442
Score = 104 bits (260), Expect = 4e-22
Identities = 48/68 (70%), Positives = 55/68 (80%)
Query: 2 GYWVQGFRCFPWLAVSFFLKDGLNVAPSTLQLLQNSANLPMVGTPLYAVVSDSVYISGQH 61
G++VQGFR FPWL +FFL + L V PS LQLLQNSANLPMV P+Y VVSDSVY GQH
Sbjct: 26 GFFVQGFRGFPWLGANFFLTEQLRVNPSVLQLLQNSANLPMVAKPIYGVVSDSVYFFGQH 85
Query: 62 RVPYIAIG 69
R+PYIA+G
Sbjct: 86 RIPYIAVG 93
>UniRef100_Q94AI3 Hypothetical protein At1g64890 [Arabidopsis thaliana]
Length = 442
Score = 104 bits (260), Expect = 4e-22
Identities = 48/68 (70%), Positives = 55/68 (80%)
Query: 2 GYWVQGFRCFPWLAVSFFLKDGLNVAPSTLQLLQNSANLPMVGTPLYAVVSDSVYISGQH 61
G++VQGFR FPWL +FFL + L V PS LQLLQNSANLPMV P+Y VVSDSVY GQH
Sbjct: 26 GFFVQGFRGFPWLGANFFLTEQLRVNPSVLQLLQNSANLPMVAKPIYGVVSDSVYFFGQH 85
Query: 62 RVPYIAIG 69
R+PYIA+G
Sbjct: 86 RIPYIAVG 93
>UniRef100_Q6I5Y4 Hypothetical protein OJ1562_H01.1 [Oryza sativa]
Length = 438
Score = 99.8 bits (247), Expect = 1e-20
Identities = 45/69 (65%), Positives = 56/69 (80%)
Query: 1 LGYWVQGFRCFPWLAVSFFLKDGLNVAPSTLQLLQNSANLPMVGTPLYAVVSDSVYISGQ 60
+G+WVQGFR FPWL V+FFLKDG+ VA S+LQ+LQ SANLPMV PL ++SD+V I G
Sbjct: 23 VGFWVQGFRLFPWLGVNFFLKDGMGVAASSLQILQASANLPMVAKPLLGLLSDAVPIRGH 82
Query: 61 HRVPYIAIG 69
R+PY+AIG
Sbjct: 83 RRLPYVAIG 91
>UniRef100_Q8GYA1 Hypothetical protein At1g04570/T1G11_17 [Arabidopsis thaliana]
Length = 542
Score = 94.7 bits (234), Expect = 4e-19
Identities = 44/69 (63%), Positives = 52/69 (74%)
Query: 1 LGYWVQGFRCFPWLAVSFFLKDGLNVAPSTLQLLQNSANLPMVGTPLYAVVSDSVYISGQ 60
LGYWVQG RCFPWLA++F + L + PSTLQL+Q S +LPMV PLY V+SD +YI
Sbjct: 93 LGYWVQGSRCFPWLALNFHMVHSLALQPSTLQLVQYSCSLPMVAKPLYGVLSDVLYIGSG 152
Query: 61 HRVPYIAIG 69
RVPYIAIG
Sbjct: 153 RRVPYIAIG 161
>UniRef100_O23028 T1G11.18 protein [Arabidopsis thaliana]
Length = 431
Score = 94.7 bits (234), Expect = 4e-19
Identities = 44/69 (63%), Positives = 52/69 (74%)
Query: 1 LGYWVQGFRCFPWLAVSFFLKDGLNVAPSTLQLLQNSANLPMVGTPLYAVVSDSVYISGQ 60
LGYWVQG RCFPWLA++F + L + PSTLQL+Q S +LPMV PLY V+SD +YI
Sbjct: 49 LGYWVQGSRCFPWLALNFHMVHSLALQPSTLQLVQYSCSLPMVAKPLYGVLSDVLYIGSG 108
Query: 61 HRVPYIAIG 69
RVPYIAIG
Sbjct: 109 RRVPYIAIG 117
>UniRef100_Q8RWQ5 AT5g54860/MBG8_12 [Arabidopsis thaliana]
Length = 491
Score = 63.5 bits (153), Expect = 1e-09
Identities = 30/66 (45%), Positives = 41/66 (61%)
Query: 3 YWVQGFRCFPWLAVSFFLKDGLNVAPSTLQLLQNSANLPMVGTPLYAVVSDSVYISGQHR 62
Y+ QGFR F W AVS+ LKD L ++PS Q + + A P PLY ++SD + I G+ R
Sbjct: 24 YFTQGFRSFVWTAVSYQLKDRLQLSPSASQFVFSVAFFPWSIKPLYGIISDCIPIGGKKR 83
Query: 63 VPYIAI 68
PY+ I
Sbjct: 84 TPYLVI 89
>UniRef100_Q9SKZ5 Expressed protein [Arabidopsis thaliana]
Length = 560
Score = 53.9 bits (128), Expect = 9e-07
Identities = 27/68 (39%), Positives = 41/68 (59%)
Query: 3 YWVQGFRCFPWLAVSFFLKDGLNVAPSTLQLLQNSANLPMVGTPLYAVVSDSVYISGQHR 62
Y+VQG LAVSF+LKD L++ P+ ++ ++LP + PLY +SDSV + G R
Sbjct: 134 YFVQGVLGLARLAVSFYLKDDLHLDPAETAVITGLSSLPWLVKPLYGFISDSVPLFGYRR 193
Query: 63 VPYIAIGG 70
Y+ + G
Sbjct: 194 RSYLVLSG 201
>UniRef100_Q8YPB3 All4285 protein [Anabaena sp.]
Length = 473
Score = 53.5 bits (127), Expect = 1e-06
Identities = 29/68 (42%), Positives = 38/68 (55%)
Query: 3 YWVQGFRCFPWLAVSFFLKDGLNVAPSTLQLLQNSANLPMVGTPLYAVVSDSVYISGQHR 62
Y+VQG LAVSFFLKD L ++P + L LP + PL+ VSD + I G R
Sbjct: 36 YFVQGILGLARLAVSFFLKDELLLSPVQVSALMGIVALPWMVKPLFGFVSDGLPIFGYRR 95
Query: 63 VPYIAIGG 70
PY+ + G
Sbjct: 96 RPYLVLSG 103
>UniRef100_Q6ZA55 Putative integral membrane protein [Oryza sativa]
Length = 490
Score = 53.1 bits (126), Expect = 2e-06
Identities = 26/68 (38%), Positives = 41/68 (60%)
Query: 3 YWVQGFRCFPWLAVSFFLKDGLNVAPSTLQLLQNSANLPMVGTPLYAVVSDSVYISGQHR 62
Y+VQG LAVSF+LKD L++ P+ ++ ++LP + PLY +SDS+ + G R
Sbjct: 73 YFVQGVLGLARLAVSFYLKDDLHLDPAETAVISGFSSLPWLIKPLYGFISDSIPLFGYRR 132
Query: 63 VPYIAIGG 70
Y+ + G
Sbjct: 133 RSYLILSG 140
>UniRef100_O68867 Hypothetical protein [Synechococcus sp.]
Length = 453
Score = 52.8 bits (125), Expect = 2e-06
Identities = 28/70 (40%), Positives = 39/70 (55%)
Query: 1 LGYWVQGFRCFPWLAVSFFLKDGLNVAPSTLQLLQNSANLPMVGTPLYAVVSDSVYISGQ 60
L Y+VQG LAVSFFLKD L ++P+ + L A LP + P + ++SD + G
Sbjct: 33 LVYFVQGILGLSRLAVSFFLKDDLGLSPAQVSALTGIAALPWMIKPAFGLLSDGFPLGGY 92
Query: 61 HRVPYIAIGG 70
R PY+ G
Sbjct: 93 RRRPYLIAAG 102
>UniRef100_Q8DMU5 Tll0016 protein [Synechococcus elongatus]
Length = 451
Score = 52.4 bits (124), Expect = 3e-06
Identities = 28/70 (40%), Positives = 41/70 (58%)
Query: 1 LGYWVQGFRCFPWLAVSFFLKDGLNVAPSTLQLLQNSANLPMVGTPLYAVVSDSVYISGQ 60
L Y+VQG LA+SFF KD L ++P+ + L A LP V P++ +VSDS+ + G
Sbjct: 34 LVYFVQGVLGLARLAISFFFKDELGLSPAEVAALMGVAALPWVIKPVFGLVSDSLPLLGF 93
Query: 61 HRVPYIAIGG 70
R Y+ + G
Sbjct: 94 RRRSYLVLSG 103
>UniRef100_UPI000034A4DC UPI000034A4DC UniRef100 entry
Length = 131
Score = 48.5 bits (114), Expect = 4e-05
Identities = 24/68 (35%), Positives = 38/68 (55%)
Query: 3 YWVQGFRCFPWLAVSFFLKDGLNVAPSTLQLLQNSANLPMVGTPLYAVVSDSVYISGQHR 62
Y+VQG LA ++F+KD L ++P+ L +LP V P+Y ++D + I G R
Sbjct: 17 YFVQGVLGLASLARTYFMKDTLGLSPAEATALMGITSLPWVIKPVYGFLTDGLPIFGYRR 76
Query: 63 VPYIAIGG 70
PY+ + G
Sbjct: 77 KPYLILAG 84
>UniRef100_Q9FFU4 Similarity to integral membrane protein [Arabidopsis thaliana]
Length = 483
Score = 47.4 bits (111), Expect = 8e-05
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 13/79 (16%)
Query: 3 YWVQGFR-----CFPWL--------AVSFFLKDGLNVAPSTLQLLQNSANLPMVGTPLYA 49
+W++ R F WL AVS+ LKD L ++PS Q + + A P PLY
Sbjct: 3 HWLKQLRSAFGVAFLWLVCLIYFTQAVSYQLKDRLQLSPSASQFVFSVAFFPWSIKPLYG 62
Query: 50 VVSDSVYISGQHRVPYIAI 68
++SD + I G+ R PY+ I
Sbjct: 63 IISDCIPIGGKKRTPYLVI 81
>UniRef100_Q55721 Integral membrane protein [Synechocystis sp.]
Length = 494
Score = 46.2 bits (108), Expect = 2e-04
Identities = 25/68 (36%), Positives = 38/68 (55%)
Query: 3 YWVQGFRCFPWLAVSFFLKDGLNVAPSTLQLLQNSANLPMVGTPLYAVVSDSVYISGQHR 62
Y+VQG LAVSFFLKD L ++P+ + L P + P+ ++SD+V + G R
Sbjct: 43 YFVQGVLGLSRLAVSFFLKDELGLSPAAMGALIGLGAAPWILKPVLGLMSDTVPLFGYRR 102
Query: 63 VPYIAIGG 70
Y+ + G
Sbjct: 103 RSYLWLSG 110
>UniRef100_UPI00002DD8A9 UPI00002DD8A9 UniRef100 entry
Length = 453
Score = 45.1 bits (105), Expect = 4e-04
Identities = 26/70 (37%), Positives = 39/70 (55%)
Query: 1 LGYWVQGFRCFPWLAVSFFLKDGLNVAPSTLQLLQNSANLPMVGTPLYAVVSDSVYISGQ 60
L Y+VQG LA F+LKD L++ PS L+ + + P + PL+ +SDSV + G
Sbjct: 32 LVYFVQGVIGLSRLAKDFYLKDELHLDPSQTALILSISQAPWLIKPLWGFLSDSVPLFGY 91
Query: 61 HRVPYIAIGG 70
R Y+ + G
Sbjct: 92 KRKSYLMLCG 101
>UniRef100_Q5SMV1 Integral membrane transporter-like protein [Oryza sativa]
Length = 539
Score = 42.7 bits (99), Expect = 0.002
Identities = 22/69 (31%), Positives = 39/69 (55%), Gaps = 3/69 (4%)
Query: 14 LAVSFFLKDGLNVAPSTLQLLQNSANLPMVGTPLYAVVSDSVYISGQHRVPYIAIGGN** 73
+A ++ KD V PS Q+ Q ++P + PL+ +++D + I+G R PY I G
Sbjct: 82 VASDYYWKDVQRVQPSAAQVYQGVTSIPWMVKPLWGLLTDVLPIAGYRRRPYFVIAG--- 138
Query: 74 FIVIVCMIM 82
F+ +V M++
Sbjct: 139 FMGVVAMLV 147
>UniRef100_Q84TJ6 Putative membrane protein [Arabidopsis thaliana]
Length = 499
Score = 41.2 bits (95), Expect = 0.006
Identities = 19/57 (33%), Positives = 31/57 (54%)
Query: 14 LAVSFFLKDGLNVAPSTLQLLQNSANLPMVGTPLYAVVSDSVYISGQHRVPYIAIGG 70
+A +++KD V PS Q L +P + PL+ +++D + I G HR PY + G
Sbjct: 66 VATEYYMKDVQKVQPSESQALTAITKIPWIIKPLWGILTDVLPIFGFHRRPYFILAG 122
>UniRef100_O22780 Hypothetical protein At2g33280 [Arabidopsis thaliana]
Length = 408
Score = 40.4 bits (93), Expect = 0.010
Identities = 17/28 (60%), Positives = 21/28 (74%)
Query: 42 MVGTPLYAVVSDSVYISGQHRVPYIAIG 69
MV PLY V+SD +YI G RVPYI++G
Sbjct: 1 MVAKPLYGVLSDVLYIGGARRVPYISVG 28
>UniRef100_Q7XU79 OSJNBa0029H02.6 protein [Oryza sativa]
Length = 527
Score = 40.0 bits (92), Expect = 0.013
Identities = 18/57 (31%), Positives = 30/57 (52%)
Query: 14 LAVSFFLKDGLNVAPSTLQLLQNSANLPMVGTPLYAVVSDSVYISGQHRVPYIAIGG 70
+A ++ KD V PS Q Q + P V P++ +++D V ++G R PY + G
Sbjct: 59 VAAGYYWKDVQRVQPSAAQFYQGFVSAPWVVKPIWGLLTDVVPVAGYRRRPYFLLAG 115
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.355 0.161 0.564
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 148,133,076
Number of Sequences: 2790947
Number of extensions: 4848075
Number of successful extensions: 24699
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 24667
Number of HSP's gapped (non-prelim): 38
length of query: 105
length of database: 848,049,833
effective HSP length: 81
effective length of query: 24
effective length of database: 621,983,126
effective search space: 14927595024
effective search space used: 14927595024
T: 11
A: 40
X1: 14 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 37 (21.6 bits)
S2: 68 (30.8 bits)
Lotus: description of TM0127a.6