BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0118a.5
(351 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_O82276 Putative non-LTR retroelement reverse transcrip... 87 5e-16
UniRef100_O80790 Putative non-LTR retroelement reverse transcrip... 86 2e-15
UniRef100_Q9XE45 Putative non-LTR retrolelement reverse transcri... 75 2e-12
UniRef100_Q9FG26 Non-LTR retroelement reverse transcriptase-like... 75 2e-12
UniRef100_Q9SJZ8 Putative non-LTR retroelement reverse transcrip... 70 9e-11
UniRef100_Q9SHY0 F1E22.12 [Arabidopsis thaliana] 68 3e-10
UniRef100_O22148 Putative non-LTR retroelement reverse transcrip... 66 1e-09
UniRef100_Q8H0A5 Putative reverse transcriptase [Oryza sativa] 64 8e-09
UniRef100_Q7XCS1 Putative reverse transcriptase [Oryza sativa] 62 2e-08
UniRef100_Q9SZD8 Hypothetical protein F19B15.120 [Arabidopsis th... 62 2e-08
UniRef100_Q7X970 BZIP-like protein [Oryza sativa] 62 2e-08
UniRef100_Q8LMJ9 Putative reverse transcriptase, 5'-partial [Ory... 62 2e-08
UniRef100_Q9ZUY7 Putative reverse transcriptase [Arabidopsis tha... 60 7e-08
UniRef100_Q9LSE9 Reverse transcriptase-like protein [Arabidopsis... 60 1e-07
UniRef100_Q9LP05 F9C16.13 [Arabidopsis thaliana] 59 2e-07
UniRef100_Q75M12 Hypothetical protein P0676G05.2 [Oryza sativa] 59 3e-07
UniRef100_Q7XS38 OSJNBa0081G05.2 protein [Oryza sativa] 58 3e-07
UniRef100_Q7XNY0 OSJNBb0015N08.11 protein [Oryza sativa] 58 4e-07
UniRef100_Q9M1F2 Hypothetical protein F9K21.130 [Arabidopsis tha... 57 1e-06
UniRef100_Q9SIS9 Putative non-LTR retroelement reverse transcrip... 56 2e-06
>UniRef100_O82276 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1231
Score = 87.4 bits (215), Expect = 5e-16
Identities = 64/215 (29%), Positives = 98/215 (44%), Gaps = 26/215 (12%)
Query: 2 WGPSPTGCYTAREAYGWLNNLDHEGQN-GRCWQWVWKLKVPEKM*LFVWLILNKALQTNG 60
W + G +T R AY L + N G + +WKL PE++ +F+WL+ + TN
Sbjct: 872 WKGTQDGAFTVRSAYSLLQGDVGDRPNMGSFFNRIWKLITPERVRVFIWLVSQNVIMTNV 931
Query: 61 NRFRCHLAQSPSRSRCSAAEETILHCLRDCPHSRELWLR-LGATTWRSFATMDVEAWI-T 118
R R HL+++ S C+ AEETILH LRDCP +W R L F + + W+ T
Sbjct: 932 ERVRRHLSENAICSVCNGAEETILHVLRDCPAMEPIWRRLLPLRRHHEFFSQSLLEWLFT 991
Query: 119 SL--ARSNHAISFLSGIWSVWLWR-------NNMCFEETPW--NLAEAWRRLSHVHDEML 167
++ + F GIW W WR +C + + ++AE RR+ HV
Sbjct: 992 NMDPVKGIWPTLFGMGIWWAWKWRCCDVFGERKICRDRLKFIKDMAEEVRRV-HV----- 1045
Query: 168 QTSQDWSPGDLNSLLCVRWHPPARGGSN*MWMTVT 202
+ P + +RW P+ G W+ +T
Sbjct: 1046 -GAVGNRPNGVRVERMIRWQVPSDG-----WVKIT 1074
>UniRef100_O80790 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 970
Score = 85.9 bits (211), Expect = 2e-15
Identities = 50/149 (33%), Positives = 73/149 (48%), Gaps = 3/149 (2%)
Query: 2 WGPSPTGCYTAREAYGWLN-NLDHEGQNGRCWQWVWKLKVPEKM*LFVWLILNKALQTNG 60
W + G +T R AY L + G + +WKL PE++ +F+WL+ + + TN
Sbjct: 613 WKGTQNGDFTVRSAYELLKPEAEERPLIGSFLKQIWKLVAPERVRVFIWLVSHMVIMTNV 672
Query: 61 NRFRCHLAQSPSRSRCSAAEETILHCLRDCPHSRELWLRLGATTWRSFATMDVEAWITSL 120
R R HL+ + S C+ A+E+ILH LRDCP +W RL ++ E T+L
Sbjct: 673 ERVRRHLSDIATCSVCNGADESILHVLRDCPAMTPIWQRLLPQRRQNEFFSQFEWLFTNL 732
Query: 121 --ARSNHAISFLSGIWSVWLWRNNMCFEE 147
A+ + F GIW W WR F E
Sbjct: 733 DPAKGDWPTLFSMGIWWAWKWRCGDVFGE 761
>UniRef100_Q9XE45 Putative non-LTR retrolelement reverse transcriptase [Arabidopsis
thaliana]
Length = 732
Score = 75.5 bits (184), Expect = 2e-12
Identities = 37/100 (37%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 2 WGPSPTGCYTAREAYGWLNNLDHEGQN-GRCWQWVWKLKVPEKM*LFVWLILNKALQTNG 60
WG S G + Y +L + Q+ R + VW + PE++ LF+WL+ +A+ TN
Sbjct: 534 WGESQDGRFKVSTTYSFLTRDEAPRQDMKRFFDRVWSVTAPERVRLFLWLVAQQAIMTNQ 593
Query: 61 NRFRCHLAQSPSRSRCSAAEETILHCLRDCPHSRELWLRL 100
R R HL+ + C A+E+I+H LRDCP +WLRL
Sbjct: 594 ERHRRHLSTTTICQVCKGAKESIIHVLRDCPAMEGIWLRL 633
>UniRef100_Q9FG26 Non-LTR retroelement reverse transcriptase-like [Arabidopsis
thaliana]
Length = 676
Score = 75.5 bits (184), Expect = 2e-12
Identities = 45/156 (28%), Positives = 72/156 (45%), Gaps = 11/156 (7%)
Query: 2 WGPSPTGCYTAREAYGWLNNLDHEGQN--GRCWQWVWKLKVPEKM*LFVWLILNKALQTN 59
W + G +T AY + ++D + R + VW++ VPE+ +F+WL+ N+ + TN
Sbjct: 313 WVGTENGRFTVSSAY-LIQSVDEISKQCMSRFFDRVWRVMVPERARIFLWLVGNQVVLTN 371
Query: 60 GNRFRCHLAQSPSRSRCSAAEETILHCLRDCPHSRELWLR-LGATTWRSFATMDVEAWI- 117
R R H+A S C A E+++H LRDCP +W+R + R F + W+
Sbjct: 372 AERVRRHMADSDVCPLCKGASESLIHVLRDCPAMMGIWMRVVPVMEQRRFFETSLLEWMY 431
Query: 118 ------TSLARSNHAISFLSGIWSVWLWRNNMCFEE 147
+ R + F +W W WR F E
Sbjct: 432 GNLKERSDSERRSWPTLFALTVWWGWKWRCGYVFGE 467
>UniRef100_Q9SJZ8 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 321
Score = 70.1 bits (170), Expect = 9e-11
Identities = 37/103 (35%), Positives = 53/103 (50%), Gaps = 3/103 (2%)
Query: 41 PEKM*LFVWLILNKALQTNGNRFRCHLAQSPSRSRCSAAEETILHCLRDCPHSRELWLRL 100
PE++ +F+WL++ + + TN R+R HL+ + C EETILH LRDCP +W RL
Sbjct: 3 PERVRVFLWLVVQQVIITNVERYRRHLSDTRVCQICQGGEETILHVLRDCPAMAGIWSRL 62
Query: 101 -GATTWRSFATMDVEAWI--TSLARSNHAISFLSGIWSVWLWR 140
R F T + WI R + F+ +W W WR
Sbjct: 63 VPRDQIRQFFTASLLEWIYKNLRERGSWPTVFVMAVWWGWKWR 105
>UniRef100_Q9SHY0 F1E22.12 [Arabidopsis thaliana]
Length = 1055
Score = 68.2 bits (165), Expect = 3e-10
Identities = 45/155 (29%), Positives = 68/155 (43%), Gaps = 9/155 (5%)
Query: 2 WGPSPTGCYTAREAYGWLNNLDHEGQN-GRCWQWVWKLKVPEKM*LFVWLILNKALQTNG 60
W S G ++ R AY L + N + +WK++VPE++ F+WL+ N+A+ T
Sbjct: 366 WKFSQDGQFSVRSAYEMLTVDEVPRPNMASFFNCLWKVRVPERVKTFLWLVGNQAVMTEE 425
Query: 61 NRFRCHLAQSPSRSRCSAAEETILHCLRDCPHSRELWLR-LGATTWRSFATMDVEAWITS 119
R R HL+ S C E++LH LRDCP +W+R + + F + + W+
Sbjct: 426 ERHRRHLSASNVCQVCKGGVESMLHVLRDCPAQLGIWVRVVPQRRQQGFFSKSLFEWLYD 485
Query: 120 LARSNHAIS-------FLSGIWSVWLWRNNMCFEE 147
F IW W WR F E
Sbjct: 486 NLGDRSGCEDIPWSTIFAVIIWWGWKWRCGNIFGE 520
>UniRef100_O22148 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1374
Score = 66.2 bits (160), Expect = 1e-09
Identities = 51/225 (22%), Positives = 85/225 (37%), Gaps = 49/225 (21%)
Query: 2 WGPSPTGCYTAREAYGWLNNLDHEGQNGR---------CWQWVWKLKVPEKM*LFVWLIL 52
W S +G Y+ + Y + + ++ N + +Q +WKL VP K+ F+W +
Sbjct: 1012 WEYSRSGHYSVKSGYWVMTEIINQRNNPQEVLQPSLDPIFQQIWKLDVPPKIHHFLWRCV 1071
Query: 53 NKALQTNGNRFRCHLAQSPSRSRCSAAEETILHCLRDCPHSRELWLRLGATTWRSFATMD 112
N L N HLA+ S RC + ET+ H L CP +R W
Sbjct: 1072 NNCLSVASNLAYRHLAREKSCVRCPSHGETVNHLLFKCPFARLTW------AISPLPAPP 1125
Query: 113 VEAWITSLARSNHAISFLSG---------------IWSVWLWRNNMCFEETPWNL----- 152
W SL R+ H + + +W +W RN++ F+ +
Sbjct: 1126 GGEWAESLFRNMHHVLSVHKSQPEESDHHALIPWILWRLWKNRNDLVFKGREFTAPQVIL 1185
Query: 153 -----AEAWRRLSHVHDEMLQTSQDWSPGDLNSLLCVRWHPPARG 192
+AW ++ +++D CV+W PP+ G
Sbjct: 1186 KATEDMDAWNNRKEPQPQVTSSTRD---------RCVKWQPPSHG 1221
>UniRef100_Q8H0A5 Putative reverse transcriptase [Oryza sativa]
Length = 1557
Score = 63.5 bits (153), Expect = 8e-09
Identities = 43/184 (23%), Positives = 75/184 (40%), Gaps = 14/184 (7%)
Query: 2 WGPSPTGCYTAREAYGWLNNLDHEGQNG--------RCWQWVWKLKVPEKM*LFVWLILN 53
W P G ++ R AY N E + + W+ +WK VP K+ +F W +
Sbjct: 1372 WHPDKLGNFSVRTAYRLAENWAKEEASSSSSDVNIRKAWELLWKCNVPSKVKIFTWRATS 1431
Query: 54 KALQTNGNRFRCHLAQSPSRSRCSAAEETILHCLRDCPHSRELWLRLGATTWRSFATMD- 112
L T N+ + +L S + C +E +H L CP ++ LWL + + S D
Sbjct: 1432 NCLPTWDNKKKRNLEISDTCVICGMEKEDTMHALCRCPQAKHLWLAMKESNDLSLRMDDH 1491
Query: 113 --VEAWI---TSLARSNHAISFLSGIWSVWLWRNNMCFEETPWNLAEAWRRLSHVHDEML 167
+W+ +L + FL +W +W N + + ++ + R L +L
Sbjct: 1492 LLGPSWLFNRLALLPDHEQPMFLMVLWRIWFVHNEIIHGKPSPSIEASQRFLQSYMKSLL 1551
Query: 168 QTSQ 171
+ Q
Sbjct: 1552 EIKQ 1555
>UniRef100_Q7XCS1 Putative reverse transcriptase [Oryza sativa]
Length = 791
Score = 62.4 bits (150), Expect = 2e-08
Identities = 40/156 (25%), Positives = 65/156 (41%), Gaps = 14/156 (8%)
Query: 2 WGPSPTGCYTAREAY---GWLNNLDHEGQNG-----RCWQWVWKLKVPEKM*LFVWLILN 53
W P G ++ R AY L N++ +G + W+ +WK KVP+K+ +F W + +
Sbjct: 413 WHPDKNGMFSVRSAYRLAAQLVNIEESSSSGTNNINKAWEMIWKCKVPQKVKIFAWRVAS 472
Query: 54 KALQTNGNRFRCHLAQSPSRSRCSAAEETILHCLRDCPHSRELWL---RLGATTWRSFAT 110
L T N+ + L QS C E H L C + +LW + G+ + A+
Sbjct: 473 NCLATMVNKKKRKLEQSDMCQICDRENEDDAHALCRCIQASQLWSCMHKSGSVSVDIKAS 532
Query: 111 MDVEAWITSLAR---SNHAISFLSGIWSVWLWRNNM 143
+ W+ FL +W W RN +
Sbjct: 533 VLGRFWLFDCLEKIPEYEQAMFLMTLWRNWYVRNEL 568
>UniRef100_Q9SZD8 Hypothetical protein F19B15.120 [Arabidopsis thaliana]
Length = 575
Score = 62.4 bits (150), Expect = 2e-08
Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 25/211 (11%)
Query: 2 WGPSPTGCYTAREAYGWLNNLDHEGQNGR---------CWQWVWKLKVPEKM*LFVWLIL 52
W + +G YT + Y L + ++ + + +Q +WK + K+ F+W L
Sbjct: 215 WDYTSSGDYTVKSGYWVLTQIINKRSSPQEVSEPSLNPIYQKIWKSQTSPKIQHFLWKCL 274
Query: 53 NKALQTNGNRFRCHLAQSPSRSRCSAAEETILHCLRDCPHSRELW------LRLGATTWR 106
+ +L G HL++ + RC + +ET+ H L C +R W + LG W
Sbjct: 275 SNSLPVAGALAYRHLSKESACIRCPSCKETVNHLLFKCTFARLTWAISSIPIPLGG-EWA 333
Query: 107 SFATMDVEAWITSLARSNHAISFLSG-----IWSVWLWRNNMCFEETPWNLAEAWRRLSH 161
+++ W+ +L N S +W +W RN + F +N E RR
Sbjct: 334 DSIYVNL-YWVFNLGNGNPQWEKASQLVPWLLWRLWKNRNELVFRGREFNAQEVLRRAED 392
Query: 162 VHDEMLQTSQDWSPG---DLNSLLCVRWHPP 189
+E ++ S G +N C RW PP
Sbjct: 393 DLEEWRIRTEAESCGTKPQVNRSSCGRWRPP 423
>UniRef100_Q7X970 BZIP-like protein [Oryza sativa]
Length = 2367
Score = 62.4 bits (150), Expect = 2e-08
Identities = 40/156 (25%), Positives = 65/156 (41%), Gaps = 14/156 (8%)
Query: 2 WGPSPTGCYTAREAY---GWLNNLDHEGQNG-----RCWQWVWKLKVPEKM*LFVWLILN 53
W P G ++ R AY L N++ +G + W+ +WK KVP+K+ +F W + +
Sbjct: 1737 WHPDKNGMFSVRSAYRLAAQLVNIEESSSSGTNNINKAWEMIWKCKVPQKVKIFAWRVAS 1796
Query: 54 KALQTNGNRFRCHLAQSPSRSRCSAAEETILHCLRDCPHSRELWL---RLGATTWRSFAT 110
L T N+ + L QS C E H L C + +LW + G+ + A+
Sbjct: 1797 NCLATMVNKKKRKLEQSDMCQICDRENEDDAHALCRCIQASQLWSCMHKSGSVSVDIKAS 1856
Query: 111 MDVEAWITSLAR---SNHAISFLSGIWSVWLWRNNM 143
+ W+ FL +W W RN +
Sbjct: 1857 VLGRFWLFDCLEKIPEYEQAMFLMTLWRNWYVRNEL 1892
>UniRef100_Q8LMJ9 Putative reverse transcriptase, 5'-partial [Oryza sativa]
Length = 507
Score = 62.4 bits (150), Expect = 2e-08
Identities = 40/156 (25%), Positives = 65/156 (41%), Gaps = 14/156 (8%)
Query: 2 WGPSPTGCYTAREAY---GWLNNLDHEGQNG-----RCWQWVWKLKVPEKM*LFVWLILN 53
W P G ++ R AY L N++ +G + W+ +WK KVP+K+ +F W + +
Sbjct: 129 WHPDKNGMFSVRSAYRLAAQLVNIEESSSSGTNNINKAWEMIWKCKVPQKVKIFAWRVAS 188
Query: 54 KALQTNGNRFRCHLAQSPSRSRCSAAEETILHCLRDCPHSRELWL---RLGATTWRSFAT 110
L T N+ + L QS C E H L C + +LW + G+ + A+
Sbjct: 189 NCLATMVNKKKRKLEQSDMCQICDRENEDDAHALCRCIQASQLWSCMHKSGSVSVDIKAS 248
Query: 111 MDVEAWITSLAR---SNHAISFLSGIWSVWLWRNNM 143
+ W+ FL +W W RN +
Sbjct: 249 VLGRFWLFDCLEKIPEYEQAMFLMTLWRNWYVRNEL 284
>UniRef100_Q9ZUY7 Putative reverse transcriptase [Arabidopsis thaliana]
Length = 314
Score = 60.5 bits (145), Expect = 7e-08
Identities = 34/97 (35%), Positives = 44/97 (45%), Gaps = 8/97 (8%)
Query: 52 LNKALQTNGNRFRCHLAQSPSRSRCSAAEETILHCLRDCPHSRELWLRL-GATTWRSFAT 110
+ + L TN R R HL+ S C AE+TI+H LRDCP +W+RL A R F T
Sbjct: 1 MQQVLMTNAERRRRHLSDSDICQICKGAEKTIIHILRDCPAMEGIWIRLVPAGKRREFFT 60
Query: 111 MDVEAWI-------TSLARSNHAISFLSGIWSVWLWR 140
+ W+ S + F IW W WR
Sbjct: 61 QSLLEWLFANLGDRRKTCESTWSTLFALSIWWAWKWR 97
>UniRef100_Q9LSE9 Reverse transcriptase-like protein [Arabidopsis thaliana]
Length = 343
Score = 59.7 bits (143), Expect = 1e-07
Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 10/122 (8%)
Query: 35 VWKLKVPEKM*LFVWLILNKALQTNGNRFRCHLAQSPSRSRCSAAEETILHCLRDCPHSR 94
+WKLK K+ F+W +L+ AL T N R H+ P RC +ET H DC +++
Sbjct: 18 IWKLKTAPKIKHFLWKLLSGALATGDNLKRRHIRNHPQCHRCCQEDETSQHLFFDCFYAQ 77
Query: 95 ELWLRLG------ATTWRSFATMDVEAWITSLARSNHAISFLSGIWSVW-LW--RNNMCF 145
++W G TT + T +E ++S + F IW +W LW RN + F
Sbjct: 78 QVWRASGIPHQELRTTGITMET-KMELLLSSCLANRQPQLFNLAIWILWRLWKSRNQLVF 136
Query: 146 EE 147
++
Sbjct: 137 QQ 138
>UniRef100_Q9LP05 F9C16.13 [Arabidopsis thaliana]
Length = 1172
Score = 58.9 bits (141), Expect = 2e-07
Identities = 40/155 (25%), Positives = 67/155 (42%), Gaps = 9/155 (5%)
Query: 2 WGPSPTGCYTAREAYGWLN-NLDHEGQNGRCWQWVWKLKVPEKM*LFVWLILNKALQTNG 60
WG + G ++ R A+ + +L + + +W + E+ +F+ L+ N+AL T+
Sbjct: 42 WGETVDGEFSVRSAHALVTRDLSPQPNVSALFSRIWGVVATERAKMFLCLVGNQALMTDV 101
Query: 61 NRFRCHLAQSPSRSRCSAAEETILHCLRDCPHSRELWLR-LGATTWRSFATMDVEAWITS 119
RF H + C ETILH L+DCP LW + + R F + W+ S
Sbjct: 102 ERFWRHRCITEVCQMCKGGSETILHMLQDCPAMAGLWNQIIPRRRRRLFFEQSLIEWLYS 161
Query: 120 -------LARSNHAISFLSGIWSVWLWRNNMCFEE 147
S + F +W W WR + F++
Sbjct: 162 NLGDDQETYESVWSTVFTMAVWWAWKWRCDNEFDK 196
>UniRef100_Q75M12 Hypothetical protein P0676G05.2 [Oryza sativa]
Length = 1936
Score = 58.5 bits (140), Expect = 3e-07
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 8/107 (7%)
Query: 2 WGPSPTGCYTAREAYGW------LNNLDHEGQN--GRCWQWVWKLKVPEKM*LFVWLILN 53
W P TG ++ R AY +NN + + W+ +WK VP+K+ +F W + +
Sbjct: 1643 WHPDKTGRFSVRSAYKLALQLADMNNCSSSSSSRLNKSWELIWKCNVPQKVRIFAWRVAS 1702
Query: 54 KALQTNGNRFRCHLAQSPSRSRCSAAEETILHCLRDCPHSRELWLRL 100
+L T N+ + +L + C +E H L C H+ LW+ L
Sbjct: 1703 NSLATMENKKKRNLERFDVCGICDREKEDAGHALCRCVHANSLWVNL 1749
>UniRef100_Q7XS38 OSJNBa0081G05.2 protein [Oryza sativa]
Length = 1711
Score = 58.2 bits (139), Expect = 3e-07
Identities = 39/157 (24%), Positives = 67/157 (41%), Gaps = 16/157 (10%)
Query: 2 WGPSPTGCYTAREAYGW------LNNLDHEGQN--GRCWQWVWKLKVPEKM*LFVWLILN 53
W P TG ++ R AY +NN + + W+ +WK VP+K+ +F W + +
Sbjct: 1487 WHPDKTGRFSVRSAYKLALQLADMNNCSSSSSSRLNKSWELIWKCNVPQKVRIFAWRVAS 1546
Query: 54 KALQTNGNRFRCHLAQSPSRSRCSAAEETILHCLRDCPHSRELWLRLGATTWRSFATMDV 113
+L T N+ + +L + C +E H L C H+ LW+ + + S +
Sbjct: 1547 NSLATMENKKKRNLERFDVCGICDREKEDAGHALCCCVHANSLWVSMHKSGSISLDVKSI 1606
Query: 114 E---AW----ITSLARSNHAISFLSGIWSVWLWRNNM 143
+ W + L+ A+ L IW W RN +
Sbjct: 1607 QFDNFWLFDCLEKLSEYERAL-VLMIIWRNWFVRNEV 1642
>UniRef100_Q7XNY0 OSJNBb0015N08.11 protein [Oryza sativa]
Length = 1026
Score = 57.8 bits (138), Expect = 4e-07
Identities = 37/151 (24%), Positives = 64/151 (41%), Gaps = 10/151 (6%)
Query: 2 WGPSPTGCYTAREAYGWLNNLDHEGQNGRCWQWVWKLKVPEKM*LFVWLILNKALQTNGN 61
W S G +T R Y L N + +WK +VP K+ +F+W + T N
Sbjct: 815 WTLSKDGKFTVRSFYRALKLQQTSFPNKK----IWKFRVPLKIRIFIWFFTKNKILTKDN 870
Query: 62 RFRCHLAQSPSRSRCSAAEETILHCLRDCPHSRELW--LRLGATTWRSFATMDV-EAWIT 118
+ + ++ + ET+ H DCP +R +W + + D+ +WI
Sbjct: 871 LLKRGWRKGDNKCQFCDKVETVQHLFFDCPLARLIWNIIACALNVKPVLSRQDLFGSWIQ 930
Query: 119 SL---ARSNHAISFLSGIWSVWLWRNNMCFE 146
S+ ++ + + +WS+W RN CFE
Sbjct: 931 SMDKFTKNLVIVGIAAVLWSIWKCRNKACFE 961
>UniRef100_Q9M1F2 Hypothetical protein F9K21.130 [Arabidopsis thaliana]
Length = 851
Score = 56.6 bits (135), Expect = 1e-06
Identities = 51/194 (26%), Positives = 75/194 (38%), Gaps = 21/194 (10%)
Query: 1 IWGPSPTGCYTAREAYGWLNNLDHEGQNGRCWQ---------WVWKLKVPEKM*LFVWLI 51
IW + TG YT R Y WL+ D + +W L + K+ F+W I
Sbjct: 625 IWSYNSTGDYTVRSGY-WLSTHDPSNTIPTMAKPHGSVDLKTKIWNLPIMPKLKHFLWRI 683
Query: 52 LNKALQTNGNRFRCHLAQSPSRSRCSAAEETILHCLRDCPHSRELWLRLGATTWR-SFAT 110
L+KAL T + P RC E+I H L CP + W +R S +
Sbjct: 684 LSKALPTTDRLTTRGMRIDPGCPRCRRENESINHALFTCPFATMAWRLSDTPLYRSSILS 743
Query: 111 MDVEAWI---------TSLARSNHAISFLSGIWSVWLWRNNMCFEETPWNLAEAWRRLSH 161
++E I T++ S I F +W +W RNN+ F + + R
Sbjct: 744 NNIEDNISNILLLLQNTTITDSQKLIPFWL-LWRIWKARNNVVFNNLRESPSITVVRAKA 802
Query: 162 VHDEMLQTSQDWSP 175
+E L +Q P
Sbjct: 803 ETNEWLNATQTQGP 816
>UniRef100_Q9SIS9 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1715
Score = 55.8 bits (133), Expect = 2e-06
Identities = 36/134 (26%), Positives = 65/134 (47%), Gaps = 12/134 (8%)
Query: 33 QWVWKLKVPEKM*LFVWLILNKALQTNGNRFRCHLAQSPSRSRCSAAEETILHCLRDCPH 92
Q +W+LK+ K+ F+W L+ AL T ++ P+ RC A+ETI H + C +
Sbjct: 1386 QEIWRLKITPKIKHFIWRCLSGALSTTTQLRNRNIPADPTCQRCCNADETINHIIFTCSY 1445
Query: 93 SRELWLRLG-ATTWRSFATMDVEAWITSL--ARSNHAISFLSGI------WSVWLWRNNM 143
++ +W + + R T ++E I + + N + L+G+ W +W RN
Sbjct: 1446 AQVVWRSANFSGSNRLCFTDNLEENIRLILQGKKNQNLPILNGLMPFWIMWRLWKSRNEY 1505
Query: 144 CFEET---PWNLAE 154
F++ PW +A+
Sbjct: 1506 LFQQLDRFPWKVAQ 1519
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.342 0.147 0.572
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 598,073,276
Number of Sequences: 2790947
Number of extensions: 23162156
Number of successful extensions: 74261
Number of sequences better than 10.0: 122
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 72
Number of HSP's that attempted gapping in prelim test: 74077
Number of HSP's gapped (non-prelim): 142
length of query: 351
length of database: 848,049,833
effective HSP length: 128
effective length of query: 223
effective length of database: 490,808,617
effective search space: 109450321591
effective search space used: 109450321591
T: 11
A: 40
X1: 15 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 38 (21.5 bits)
S2: 75 (33.5 bits)
Lotus: description of TM0118a.5