BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0113.14
(584 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q9FW98 Putative non-LTR retroelement reverse transcrip... 250 9e-65
UniRef100_Q9SZD8 Hypothetical protein F19B15.120 [Arabidopsis th... 230 1e-58
UniRef100_Q9SIQ5 Putative non-LTR retroelement reverse transcrip... 229 2e-58
UniRef100_Q9SKJ4 Putative non-LTR retroelement reverse transcrip... 228 3e-58
UniRef100_Q7XJS2 Putative non-LTR retroelement reverse transcrip... 221 5e-56
UniRef100_O22148 Putative non-LTR retroelement reverse transcrip... 216 1e-54
UniRef100_Q9M1F2 Hypothetical protein F9K21.130 [Arabidopsis tha... 211 5e-53
UniRef100_Q9SHP2 Putative non-LTR retroelement reverse transcrip... 204 6e-51
UniRef100_Q9SIS9 Putative non-LTR retroelement reverse transcrip... 202 2e-50
UniRef100_Q8S6P1 Putative reverse transcriptase [Oryza sativa] 201 6e-50
UniRef100_Q9SLE9 Putative non-LTR retroelement reverse transcrip... 199 2e-49
UniRef100_Q94GP2 Putative reverse transcriptase [Oryza sativa] 198 3e-49
UniRef100_Q94H40 Putative reverse transcriptase [Oryza sativa] 190 9e-47
UniRef100_Q8H0A5 Putative reverse transcriptase [Oryza sativa] 189 1e-46
UniRef100_Q7XUE8 OJ991113_30.21 protein [Oryza sativa] 189 1e-46
UniRef100_Q9C697 Reverse transcriptase, putative; 16838-20266 [A... 189 3e-46
UniRef100_Q9FJA4 Non-LTR retroelement reverse transcriptase-like... 187 6e-46
UniRef100_Q7XLZ5 OSJNBa0086O06.14 protein [Oryza sativa] 184 5e-45
UniRef100_Q7X970 BZIP-like protein [Oryza sativa] 181 7e-44
UniRef100_Q7XCS1 Putative reverse transcriptase [Oryza sativa] 180 1e-43
>UniRef100_Q9FW98 Putative non-LTR retroelement reverse transcriptase [Oryza sativa]
Length = 1382
Score = 250 bits (638), Expect = 9e-65
Identities = 166/567 (29%), Positives = 257/567 (45%), Gaps = 32/567 (5%)
Query: 25 LPTYAMAILKFPKQFCHQIASQIARFWWR-GNNDRGIHWKNWASLMFSKAEGGMGFKDFA 83
+P Y M+ + P C ++ + IA WW + + +HWK+W+ L K GGMGF++F
Sbjct: 815 IPNYVMSCFRIPVSICEKMKTCIADHWWGFEDGKKKMHWKSWSWLSTPKFLGGMGFREFT 874
Query: 84 VLNQACLAKQAWRILQEPNAFWASVLKGIYFPNENFLHAKKKRQASWAWNSIIHGRELIL 143
NQA L +Q WR+L +P++ + VLKG YFPN +F A + + S+ W S++ GREL+
Sbjct: 875 TFNQAMLGRQCWRLLTDPDSLCSRVLKGRYFPNSSFWEAAQPKSPSFTWRSLLFGRELLA 934
Query: 144 NQGRWSIEDGKSVNLLGHRWL-----ACNERLREGPLDTTVSSLMENQTRTWSISKITSV 198
RW + DGK++ + W+ L P D TVS LM R W I S+
Sbjct: 935 KGVRWGVGDGKTIKIFSDNWIPGFRPQLVTTLSPFPTDATVSCLMNEDARCWDGDLIRSL 994
Query: 199 LSLPDLGRVLQTPIRLTEGEDEIFWPYRDYGQYTIKSGYIQARSH----KELEESRG-AT 253
+ +LQ PI D WP+ G Y+++S Y ARS + RG A+
Sbjct: 995 FPVDIAKEILQIPISRHGDADFASWPHDKLGLYSVRSAYNLARSEAFFADQSNSGRGMAS 1054
Query: 254 SSEPSKECWRSI*SARIPHKIKVFLWKIMHEALPTKVNLRRRHCVSETSCPICEAPREDA 313
S++ W+ + P K+K+ LW+ HE L T LRRRH S C C R+D
Sbjct: 1055 RLLESQKDWKGLWKINAPGKMKITLWRAAHECLATGFQLRRRHIPSTDGCVFCN--RDDT 1112
Query: 314 A-HVFLHCPWLRPVW---FGSFFQLAPDPSILSLPIWLEAKLSQLSNLESGSEQLISYLG 369
HVFL CP+ +W G ++ W+ L+ GS + L
Sbjct: 1113 VEHVFLFCPFAAQIWEEIKGKCAVKLGRNGFSTMRQWI------FDFLKRGSSHANTLLA 1166
Query: 370 FLLWGVWKMRNNGTFRGERPNPVLCLNLAVEASKEFLLETTTEFLPIYGGHVNRGIRHWT 429
W +W+ RNN +P + + + + + +L+ T+ + G + I W
Sbjct: 1167 VTFWHIWEARNNTKNNNGTVHPQRVV-IKILSYVDMILKHNTKTVDGQRGGNTQAIPRWQ 1225
Query: 430 RPPLGFLKCNTDAGFLRVGNKAAGGYIFKDDKG-CFV*GNHRQLHAASALAAEALILREA 488
PP N+DA G + +D+ G C V + AEAL +R A
Sbjct: 1226 PPPASVWMINSDAAIFSSSRTMGVGALIRDNTGKCLVACSEMISDVVLPELAEALAIRRA 1285
Query: 489 VFAAMNLNMDRVVFEADNLGLIEACREQ-REKGEILAIVKDIRKCKLDFPNWIFSWTRRE 547
+ A ++ +V +D L +I + R++ + +++DI+K F F R
Sbjct: 1286 LGLAKEEGLEHIVMASDCLTVIRRIQTSGRDRSGVGCVIEDIKKLASTFVLCSFMHVNRL 1345
Query: 548 GNECAHVLAR---LALC---RSIPPHW 568
N AH LAR L+ C RS+ P +
Sbjct: 1346 SNLAAHSLARNAELSTCTVYRSVIPDY 1372
>UniRef100_Q9SZD8 Hypothetical protein F19B15.120 [Arabidopsis thaliana]
Length = 575
Score = 230 bits (586), Expect = 1e-58
Identities = 173/580 (29%), Positives = 253/580 (42%), Gaps = 49/580 (8%)
Query: 25 LPTYAMAILKFPKQFCHQIASQIARFWWRGNND-RGIHWKNWASLMFSKAEGGMGFKDFA 83
LPTY MA PK C QI S +A FWWR + +G+HWK W L KAEGG+GFKD
Sbjct: 3 LPTYTMACFLLPKTVCKQIISVLADFWWRNKQEAKGMHWKAWDHLSCYKAEGGIGFKDIE 62
Query: 84 VLNQACLAKQAWRILQEPNAFWASVLKGIYFPNENFLHAKKKRQASWAWNSIIHGRELIL 143
N A L KQ WR+L P + A V K YF + L+A + S+ W SI +E++
Sbjct: 63 AFNLALLGKQMWRMLSRPESLMAKVFKSRYFHKSDPLNAPLGSRPSFVWKSIHASQEILR 122
Query: 144 NQGRWSIEDGKSVNLLGHRWL------ACNERLREGPLD-------TTVSSLMENQTRTW 190
R + +G+ + + H+WL A R P + VS L++ R W
Sbjct: 123 QGARAVVGNGEDIIIWRHKWLDSKPASAALRMQRVPPQEYASVSSILKVSDLIDESGREW 182
Query: 191 SISKITSVLSLPDLGRVLQTPIRLTEGE--DEIFWPYRDYGQYTIKSGYIQARSHKELEE 248
K + P++ R L +R D W Y G YT+KSGY
Sbjct: 183 --RKDVIEMLFPEVERKLIGELRPGGRRILDSYTWDYTSSGDYTVKSGYWVLTQIINKRS 240
Query: 249 SRGATSSEPSKECWRSI*SARIPHKIKVFLWKIMHEALPTKVNLRRRHCVSETSCPICEA 308
S S ++ I ++ KI+ FLWK + +LP L RH E++C C +
Sbjct: 241 SPQEVSEPSLNPIYQKIWKSQTSPKIQHFLWKCLSNSLPVAGALAYRHLSKESACIRCPS 300
Query: 309 PREDAAHVFLHCPWLRPVWFGSFFQLAPDPSILSLPI-----WLEA---KLSQLSNLESG 360
+E H+ C + R W +I S+PI W ++ L + NL +G
Sbjct: 301 CKETVNHLLFKCTFARLTW-----------AISSIPIPLGGEWADSIYVNLYWVFNLGNG 349
Query: 361 S---EQLISYLGFLLWGVWKMRNNGTFRGERPNPVLCLNLAVEASKEFLLETTTEFLPIY 417
+ E+ + +LLW +WK RN FRG N L A + +E+ + T E
Sbjct: 350 NPQWEKASQLVPWLLWRLWKNRNELVFRGREFNAQEVLRRAEDDLEEWRIRTEAESCGTK 409
Query: 418 GGHVNRGIRHWTRPPLGFLKCNTDAGFLRVGNKAAGGYIFKDDKGCFV*GNHRQL-HAAS 476
W PP ++KCNTDA + R + G++ +++KG R L S
Sbjct: 410 PQVNRSSCGRWRPPPHQWVKCNTDATWNRDNERCGIGWVLRNEKGEVKWMGARALPKLKS 469
Query: 477 ALAAEALILREAVFAAMNLNMDRVVFEADNLGLIEACREQREKGEILAIVKDIRKCKLDF 536
L AE +R AV + + V+FE+D+ LIE + ++D+++ F
Sbjct: 470 VLEAELEAMRWAVLSLSRFQYNYVIFESDSQVLIEILNNDEIWPSLKPTIQDLQRLLSQF 529
Query: 537 PNWIFSWTRREGNECAHVLARLAL--------CRSIPPHW 568
F + REGN A +AR +L SI P W
Sbjct: 530 TEVKFVFIPREGNTLAERVARESLSFLNYDPKLYSIVPSW 569
>UniRef100_Q9SIQ5 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1524
Score = 229 bits (583), Expect = 2e-58
Identities = 168/572 (29%), Positives = 264/572 (45%), Gaps = 34/572 (5%)
Query: 7 KIVKPSWKRNFDQGSGSGLPTYAMAILKFPKQFCHQIASQIARFWW-RGNNDRGIHWKNW 65
+ + P+ K + +P YAM+ K PK +I S + FWW + +N RGI W W
Sbjct: 938 RFLSPAGKEIMLKSVALAMPVYAMSCFKLPKGIVSEIESLLMNFWWEKASNQRGIPWVAW 997
Query: 66 ASLMFSKAEGGMGFKDFAVLNQACLAKQAWRILQEPNAFWASVLKGIYFPNENFLHAKKK 125
L +SK EGG+GF+D A N A LAKQAWR++Q PN+ +A V+K YF + + L AK +
Sbjct: 998 KRLQYSKKEGGLGFRDLAKFNDALLAKQAWRLIQYPNSLFARVMKARYFKDVSILDAKVR 1057
Query: 126 RQASWAWNSIIHGRELILNQGRWSIEDGKSV-----NLLGH---RWLACNERLREGPLDT 177
+Q S+ W S++ G L+ R I DG+++ N++ R L E +E
Sbjct: 1058 KQQSYGWASLLDGIALLKKGTRHLIGDGQNIRIGLDNIVDSHPPRPLNTEETYKE----M 1113
Query: 178 TVSSLMENQTR--TWSISKITSVLSLPDLGRVLQTPIRLTEGEDEIFWPYRDYGQYTIKS 235
T+++L E + W SKI+ + D G + + + ++ D+I W Y G+YT++S
Sbjct: 1114 TINNLFERKGSYYFWDDSKISQFVDQSDHGFIHRIYLAKSKKPDKIIWNYNTTGEYTVRS 1173
Query: 236 GYIQARSHKELEESRGATSSEPSKECWRSI*SARIPHKIKVFLWKIMHEALPTKVNLRRR 295
GY +H S + I + I K+K FLW+ + +AL T L R
Sbjct: 1174 GY-WLLTHDPSTNIPAINPPHGSIDLKTRIWNLPIMPKLKHFLWRALSQALATTERLTTR 1232
Query: 296 HCVSETSCPICEAPREDAAHVFLHCPWLRPVWFGSFFQLAPDPSILSLPIW---LEAKLS 352
+ CP C E H CP+ W+ S D S++ + E +S
Sbjct: 1233 GMRIDPICPRCHRENESINHALFTCPFATMAWWLS------DSSLIRNQLMSNDFEENIS 1286
Query: 353 QLSNL-----ESGSEQLISYLGFLLWGVWKMRNNGTFRGERPNPVLCLNLAVEASKEFLL 407
+ N S +L+ +L+W +WK RNN F R +P + A + ++L
Sbjct: 1287 NILNFVQDTTMSDFHKLLPV--WLIWRIWKARNNVVFNKFRESPSKTVLSAKAETHDWLN 1344
Query: 408 ETTT-EFLPIYGGHVNRGIRHWTRPPLGFLKCNTDAGFLRVGNKAAGGYIFKDDKGCFV- 465
T + + P + W PP ++KCN DAGF +A GG+I ++ G +
Sbjct: 1345 ATQSHKKTPSPTRQIAENKIEWRNPPATYVKCNFDAGFDVQKLEATGGWIIRNHYGTPIS 1404
Query: 466 *GNHRQLHAASALAAEALILREAVFAAMNLNMDRVVFEADNLGLIEACREQREKGEILAI 525
G+ + H ++ L AE L A+ +V E D LI +
Sbjct: 1405 WGSMKLAHTSNPLEAETKALLAALQQTWIRGYTQVFMEGDCQTLINLINGISFHSSLANH 1464
Query: 526 VKDIRKCKLDFPNWIFSWTRREGNECAHVLAR 557
++DI F + F + RR+GN+ AHVLA+
Sbjct: 1465 LEDISFWANKFASIQFGFIRRKGNKLAHVLAK 1496
>UniRef100_Q9SKJ4 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1750
Score = 228 bits (582), Expect = 3e-58
Identities = 168/572 (29%), Positives = 264/572 (45%), Gaps = 34/572 (5%)
Query: 7 KIVKPSWKRNFDQGSGSGLPTYAMAILKFPKQFCHQIASQIARFWW-RGNNDRGIHWKNW 65
+ + P+ K + +P YAM+ K PK +I S + FWW + +N RGI W W
Sbjct: 1164 RFLSPAGKEIMLKSVALAMPVYAMSCFKLPKGIVSEIESLLMNFWWEKASNQRGIPWVAW 1223
Query: 66 ASLMFSKAEGGMGFKDFAVLNQACLAKQAWRILQEPNAFWASVLKGIYFPNENFLHAKKK 125
L +SK EGG+GF+D A N A LAKQAWR++Q PN+ +A V+K YF + + L AK +
Sbjct: 1224 KRLQYSKKEGGLGFRDLAKFNDALLAKQAWRLIQYPNSLFARVMKARYFKDVSILDAKVR 1283
Query: 126 RQASWAWNSIIHGRELILNQGRWSIEDGKSV-----NLLGH---RWLACNERLREGPLDT 177
+Q S+ W S++ G L+ R I DG+++ N++ R L E +E
Sbjct: 1284 KQQSYGWASLLDGIALLKKGTRHLIGDGQNIRIGLDNIVDSHPPRPLNTEETYKE----M 1339
Query: 178 TVSSLMENQTR--TWSISKITSVLSLPDLGRVLQTPIRLTEGEDEIFWPYRDYGQYTIKS 235
T+++L E + W SKI+ + D G + + + ++ D+I W Y G+YT++S
Sbjct: 1340 TINNLFERKGSYYFWDDSKISQFVDQSDHGFIHRIYLAKSKKPDKIIWNYNTTGEYTVRS 1399
Query: 236 GYIQARSHKELEESRGATSSEPSKECWRSI*SARIPHKIKVFLWKIMHEALPTKVNLRRR 295
GY +H S + I + I K+K FLW+ + +AL T L R
Sbjct: 1400 GY-WLLTHDPSTNIPAINPPHGSIDLKTRIWNLPIMPKLKHFLWRALSQALATTERLTTR 1458
Query: 296 HCVSETSCPICEAPREDAAHVFLHCPWLRPVWFGSFFQLAPDPSILSLPIW---LEAKLS 352
+ SCP C E H CP+ W S D S++ + E +S
Sbjct: 1459 GMRIDPSCPRCHRENESINHALFTCPFATMAWRLS------DSSLIRNQLMSNDFEENIS 1512
Query: 353 QLSNL-----ESGSEQLISYLGFLLWGVWKMRNNGTFRGERPNPVLCLNLAVEASKEFLL 407
+ N S +L+ +L+W +WK RNN F R +P + A + ++L
Sbjct: 1513 NILNFVQDTTMSDFHKLLPV--WLIWRIWKARNNVVFNKFRESPSKTVLSAKAETHDWLN 1570
Query: 408 ETTT-EFLPIYGGHVNRGIRHWTRPPLGFLKCNTDAGFLRVGNKAAGGYIFKDDKGCFV- 465
T + + P + W PP ++KCN DAGF +A GG+I ++ G +
Sbjct: 1571 ATQSHKKTPSPTRQIAENKIEWRNPPATYVKCNFDAGFDVQKLEATGGWIIRNHYGTPIS 1630
Query: 466 *GNHRQLHAASALAAEALILREAVFAAMNLNMDRVVFEADNLGLIEACREQREKGEILAI 525
G+ + H ++ L AE L A+ +V E D LI +
Sbjct: 1631 WGSMKLAHTSNPLEAETKALLAALQQTWIRGYTQVFMEGDCQTLINLINGISFHSSLANH 1690
Query: 526 VKDIRKCKLDFPNWIFSWTRREGNECAHVLAR 557
++DI F + F + R++GN+ AHVLA+
Sbjct: 1691 LEDISFWANKFASIQFGFIRKKGNKLAHVLAK 1722
>UniRef100_Q7XJS2 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1344
Score = 221 bits (563), Expect = 5e-56
Identities = 149/527 (28%), Positives = 245/527 (46%), Gaps = 22/527 (4%)
Query: 25 LPTYAMAILKFPKQFCHQIASQIARFWWRG-NNDRGIHWKNWASLMFSKAEGGMGFKDFA 83
LP Y M+ K PK C ++ + + FWW R IHW +W L K +GG GFKD
Sbjct: 778 LPVYVMSCFKLPKNLCQKLTTVMMDFWWNSMQQKRKIHWLSWQRLTLPKDQGGFGFKDLQ 837
Query: 84 VLNQACLAKQAWRILQEPNAFWASVLKGIYFPNENFLHAKKKRQASWAWNSIIHGRELIL 143
NQA LAKQAWR+LQE + ++ V + YF N +FL A + + S+AW SI+ GREL++
Sbjct: 838 CFNQALLAKQAWRVLQEKGSLFSRVFQSRYFSNSDFLSATRGSRPSYAWRSILFGRELLM 897
Query: 144 NQGRWSIEDGKSVNLLGHRWLACN------ERLREGPLDTTVSSLMENQTRTWSISKITS 197
R I +G+ + +WL R R +D VS L++ +R W+++ +
Sbjct: 898 QGLRTVIGNGQKTFVWTDKWLHDGSNRRPLNRRRFINVDLKVSQLIDPTSRNWNLNMLRD 957
Query: 198 VLSLPDLGRVL-QTPIRLTEGEDEIFWPYRDYGQYTIKSGY--IQARSHKELEESRGATS 254
+ D+ +L Q P+ ED W + G Y++K+GY + + H L +
Sbjct: 958 LFPWKDVEIILKQRPLFFK--EDSFCWLHSHNGLYSVKTGYEFLSKQVHHRLYQEAKVKP 1015
Query: 255 SEPSKECWRSI*SARIPHKIKVFLWKIMHEALPTKVNLRRRHCVSETSCPICEAPREDAA 314
S S + I + KI++FLWK +H A+P + LR R S+ C +C+ E
Sbjct: 1016 SVNS--LFDKIWNLHTAPKIRIFLWKALHGAIPVEDRLRTRGIRSDDGCLMCDTENETIN 1073
Query: 315 HVFLHCPWLRPVWFGSFFQLAPDPSILSLPIWLE-AKLSQLSNLESGSEQLISYLGFLLW 373
H+ CP R VW + L+ S S ++ ++L L+ L ++LW
Sbjct: 1074 HILFECPLARQVW--AITHLSSAGSEFSNSVYTNMSRLIDLTQQNDLPHHLRFVSPWILW 1131
Query: 374 GVWKMRNNGTFRGERPNPVLCLNLAVEASKEFLLETTTEFLPIYGGHVNRGIRHWTRPPL 433
+WK RN F G+ ++ A EA E+ T + + I W P
Sbjct: 1132 FLWKNRNALLFEGKGSITTTLVDKAYEAYHEWFSAQT----HMQNDEKHLKITKWCPPLP 1187
Query: 434 GFLKCNTDAGFLRVGNKAAGGYIFKDDKGCFV*GNHRQLHAA-SALAAEALILREAVFAA 492
G LKCN + + + + ++ +D +G + + R + S +A+ A+ +
Sbjct: 1188 GELKCNIGFAWSKQHHFSGASWVVRDSQGKVLLHSRRSFNEVHSPYSAKIRSWEWALESM 1247
Query: 493 MNLNMDRVVFEADNLGLIEACREQREKGEILAIVKDIRKCKLDFPNW 539
+ + DRV+F + +I+A + E +L + ++ D P+W
Sbjct: 1248 THHHFDRVIFASSTHEIIQALHKPHEWPLLLGDISELLSFTKDKPHW 1294
>UniRef100_O22148 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1374
Score = 216 bits (551), Expect = 1e-54
Identities = 167/611 (27%), Positives = 252/611 (40%), Gaps = 54/611 (8%)
Query: 3 RVERKIVKPSWKRNFDQGSGS---------GLPTYAMAILKFPKQFCHQIASQIARFWWR 53
R+ +K++ W+ NF G LPTY M+ K PK C QI S +A FWW+
Sbjct: 771 RLGKKVL--GWQSNFLSPGGKEILLKAVAMALPTYTMSCFKIPKTICQQIESVMAEFWWK 828
Query: 54 GNND-RGIHWKNWASLMFSKAEGGMGFKDFAVLNQACLAKQAWRILQEPNAFWASVLKGI 112
+ RG+HWK W L KA GG+GFK+ N A L KQ WR++ E ++ A V K
Sbjct: 829 NKKEGRGLHWKAWCHLSRPKAVGGLGFKEIEAFNIALLGKQLWRMITEKDSLMAKVFKSR 888
Query: 113 YFPNENFLHAKKKRQASWAWNSIIHGRELILNQGRWSIEDGKSVNLLGHRWLACN----- 167
YF + L+A + S+AW SI + LI R I +G+++N+ W+
Sbjct: 889 YFSKSDPLNAPLGSRPSFAWKSIYEAQVLIKQGIRAVIGNGETINVWTDPWIGAKPAKAA 948
Query: 168 ERLREGPLDT--------TVSSLMENQTRTWSISKITSVLSLPDLGRVLQTPIRLTEGED 219
+ ++ L + V L+ R W+ + ++ + +L E D
Sbjct: 949 QAVKRSHLVSQYAANSIHVVKDLLLPDGRDWNWNLVSLLFPDNTQENILALRPGGKETRD 1008
Query: 220 EIFWPYRDYGQYTIKSGYIQARSHKELEESRGATSSEPSKECWRSI*SARIPHKIKVFLW 279
W Y G Y++KSGY + ++ I +P KI FLW
Sbjct: 1009 RFTWEYSRSGHYSVKSGYWVMTEIINQRNNPQEVLQPSLDPIFQQIWKLDVPPKIHHFLW 1068
Query: 280 KIMHEALPTKVNLRRRHCVSETSCPICEAPREDAAHVFLHCPWLRPVWFGSFFQLAPDPS 339
+ ++ L NL RH E SC C + E H+ CP+ R W S P
Sbjct: 1069 RCVNNCLSVASNLAYRHLAREKSCVRCPSHGETVNHLLFKCPFARLTWAISPLPAPPGGE 1128
Query: 340 ILSLPIWLEAKLSQLSNL---------ESGSEQLISYLGFLLWGVWKMRNNGTFRGERPN 390
W E+ + ++ ES LI + +LW +WK RN+ F+G
Sbjct: 1129 ------WAESLFRNMHHVLSVHKSQPEESDHHALIPW---ILWRLWKNRNDLVFKGREFT 1179
Query: 391 PVLCLNLAVEASKEFLLETTTEFLPIYGGHVNRGIRHWTRPPLGFLKCNTDAGFLRVGNK 450
+ A E + E P W P G++KCNTD + +
Sbjct: 1180 APQVILKATEDMDAW--NNRKEPQPQVTSSTRDRCVKWQPPSHGWVKCNTDGAWSKDLGN 1237
Query: 451 AAGGYIFKDDKGCFV*GNHRQLHA-ASALAAEALILREAVFAAMNLNMDRVVFEADNLGL 509
G++ ++ G + R L + S L E LR AV + N RV+FE+D+ L
Sbjct: 1238 CGVGWVLRNHTGRLLWLGLRALPSQQSVLETEVEALRWAVLSLSRFNYRRVIFESDSQYL 1297
Query: 510 IEACREQREKGEILAIVKDIRKCKLDFPNWIFSWTRREGNECAHVLARLAL--------C 561
+ + + + + ++DIR F F +TRREGN A AR +L
Sbjct: 1298 VSLIQNEMDIPSLAPRIQDIRNLLRHFEEVKFQFTRREGNNVADRTARESLSLMNYDPKM 1357
Query: 562 RSIPPHWCAHL 572
SI P W +L
Sbjct: 1358 YSITPDWIKNL 1368
>UniRef100_Q9M1F2 Hypothetical protein F9K21.130 [Arabidopsis thaliana]
Length = 851
Score = 211 bits (537), Expect = 5e-53
Identities = 143/459 (31%), Positives = 215/459 (46%), Gaps = 35/459 (7%)
Query: 7 KIVKPSWKRNFDQGSGSGLPTYAMAILKFPKQFCHQIASQIARFWW-RGNNDRGIHWKNW 65
K + P+ K + +P YAM+ K P+ +I S + FWW + +N RGI W W
Sbjct: 403 KFLSPAGKEILLKSVALAMPVYAMSCFKLPQGIVSEIESLLMNFWWEKASNKRGIPWVAW 462
Query: 66 ASLMFSKAEGGMGFKDFAVLNQACLAKQAWRILQEPNAFWASVLKGIYFPNENFLHAKKK 125
L +SK EGG+GF+D A N A LAKQAWRI+Q PN+ +A V+K YF + + + AK +
Sbjct: 463 KRLQYSKKEGGLGFRDLAKFNDALLAKQAWRIIQYPNSLFARVMKARYFKDNSIIDAKTR 522
Query: 126 RQASWAWNSIIHGRELILNQGRWSIEDGKSVNL--------LGHRWLACNERLREGPLDT 177
Q S+ W+S++ G L+ R+ I DGK++ L R L +E+ LD
Sbjct: 523 SQQSYGWSSLLSGIALLRKGTRYVIGDGKTIRLGIDNVVDSHPPRPLLTDEQHNGLSLDN 582
Query: 178 TVSSLMENQTRTWSISKITSVLSLPDLGRVLQTPIRLTEGEDEIFWPYRDYGQYTIKSGY 237
+R W +K+ + + D + + + D + W Y G YT++SGY
Sbjct: 583 LFQH--RGHSRCWDNAKLQTFVDQSDHDYIKRIYLSTRSKTDRLIWSYNSTGDYTVRSGY 640
Query: 238 IQARSHKELEESRGATSSEPSKECWRSI*SARIPHKIKVFLWKIMHEALPTKVNLRRRHC 297
+H S + I + I K+K FLW+I+ +ALPT L R
Sbjct: 641 -WLSTHDPSNTIPTMAKPHGSVDLKTKIWNLPIMPKLKHFLWRILSKALPTTDRLTTRGM 699
Query: 298 VSETSCPICEAPREDAAHVFLHCPWLRPVWFGSFFQLAPDP----SILSLPIWLEAKLSQ 353
+ CP C E H CP+ W +L+ P SILS I E +S
Sbjct: 700 RIDPGCPRCRRENESINHALFTCPFATMAW-----RLSDTPLYRSSILSNNI--EDNISN 752
Query: 354 L-----SNLESGSEQLISYLGFLLWGVWKMRNNGTFRGERPNPVLCLNLAVEASKEFLLE 408
+ + + S++LI + +LLW +WK RNN F R +P + + A + E+L
Sbjct: 753 ILLLLQNTTITDSQKLIPF--WLLWRIWKARNNVVFNNLRESPSITVVRAKAETNEWLNA 810
Query: 409 TTTE---FLPIYGGHVNRGIRHWTRPPLGFLKCNTDAGF 444
T T+ LP G W +P + ++KCN DA F
Sbjct: 811 TQTQGPRRLP--KRTTAAGNTTWVKPQMPYIKCNFDASF 847
>UniRef100_Q9SHP2 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 773
Score = 204 bits (519), Expect = 6e-51
Identities = 120/388 (30%), Positives = 186/388 (47%), Gaps = 8/388 (2%)
Query: 7 KIVKPSWKRNFDQGSGSGLPTYAMAILKFPKQFCHQIASQIARFWWRGNNDRG-IHWKNW 65
K++ P+ K + + +PTY+M+ P + HQI S + FWW + I W W
Sbjct: 237 KLLSPAGKEVLIKSIVTAIPTYSMSCFLLPMRLIHQITSAMRWFWWSNTKVKHKIPWVAW 296
Query: 66 ASLMFSKAEGGMGFKDFAVLNQACLAKQAWRILQEPNAFWASVLKGIYFPNENFLHAKKK 125
+ L K GG+ +D N A LAKQ+WRILQ+P + A V K YFP E L AK
Sbjct: 297 SKLNDPKKMGGLAIRDLKDFNIALLAKQSWRILQQPFSLMARVFKAKYFPKERLLDAKAT 356
Query: 126 RQASWAWNSIIHGRELILNQGRWSIEDGKSVNLLGHRWLACN-ERLREGPLDTTVSSLME 184
Q+S+AW SI+HG +LI ++ +G ++ L WL N R G D+ S L
Sbjct: 357 SQSSYAWKSILHGTKLISRGLKYIAGNGNNIQLWKDNWLPLNPPRPPVGTCDSIYSQLKV 416
Query: 185 NQ---TRTWSISKITSVLSLPDLGRVLQTPIRLTEGEDEIFWPYRDYGQYTIKSGYIQAR 241
+ W+ + ++ D+ + +T D I W Y G Y++KSGY R
Sbjct: 417 SDLLIEGRWNEDLLCKLIHQNDIPHIRAIRPSITGANDAITWIYTHDGNYSVKSGYHLLR 476
Query: 242 SHKELEESRGATSSEPSKE-CWRSI*SARIPHKIKVFLWKIMHEALPTKVNLRRRHCVSE 300
+ + + + +E S + + +I P KIK F W+ H ALPT NL+RR +++
Sbjct: 477 KLSQQQHASLPSPNEVSAQTVFTNIWKQNAPPKIKHFWWRSAHNALPTAGNLKRRRLITD 536
Query: 301 TSCPICEAPREDAAHVFLHCPWLRPVWFGSFFQLAPDPSILSLPIWLEAKLSQLSNLESG 360
+C C ED H+ C + +W + +L P S++S L + L
Sbjct: 537 DTCQRCGEASEDVNHLLFQCRVSKEIWEQAHIKLCPGDSLMSNS--FNQNLESIQKLNQS 594
Query: 361 SEQLISYLGFLLWGVWKMRNNGTFRGER 388
+ + +S F+ W +WKMRN+ F +R
Sbjct: 595 ARKDVSLFPFIGWRIWKMRNDLIFNNKR 622
>UniRef100_Q9SIS9 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1715
Score = 202 bits (514), Expect = 2e-50
Identities = 168/584 (28%), Positives = 247/584 (41%), Gaps = 49/584 (8%)
Query: 9 VKPSWKRNFDQGSGSGLPTYAMAILKFPKQFCHQIASQIARFWWRGNNDRGIHWKNWASL 68
+ P+ K + LP Y+M P C++I S I FWW N
Sbjct: 1146 LSPAGKEIVIKAIAMALPVYSMNCFLLPTLICNEINSLITAFWWGKEN------------ 1193
Query: 69 MFSKAEGGMGFKDFAVLNQACLAKQAWRILQEPNAFWASVLKGIYFPNENFLHAKKKRQA 128
EG +GFKD N+A LAKQAWRIL P + A + KG+Y+PN +L A K A
Sbjct: 1194 -----EGDLGFKDLHQFNRALLAKQAWRILTNPQSLLARLYKGLYYPNTTYLRANKGGHA 1248
Query: 129 SWAWNSIIHGRELILNQG-RWSIEDGKSVNLLGHRWL-ACNERLREGPL---DTTVSSLM 183
S+ WNSI G+ L+L QG R + DG++ + WL R GP+ D V+ L
Sbjct: 1249 SYGWNSIQEGK-LLLQQGLRVRLGDGQTTKIWEDPWLPTLPPRPARGPILDEDMKVADLW 1307
Query: 184 ENQTRTWSISKITSVLSLPDLGRVLQTPIRLTEGEDEIFWPYRDYGQYTIKSGYIQARSH 243
R W VL+ D + D W Y QYT++SGY A +H
Sbjct: 1308 RENKREWDPVIFEGVLNPEDQQLAKSLYLSNYAARDSYKWAYTRNTQYTVRSGYWVA-TH 1366
Query: 244 KELEESRGATSSEPSKECWRSI*SARIPHKIKVFLWKIMHEALPTKVNLRRRHCVSETSC 303
L E E + I +I KIK F+W+ + AL T LR R+ ++ +C
Sbjct: 1367 VNLTEEEIINPLEGDVPLKQEIWRLKITPKIKHFIWRCLSGALSTTTQLRNRNIPADPTC 1426
Query: 304 PICEAPREDAAHVFLHCPWLRPVWFGSFFQ-----LAPDPSILSLPIWLEAKLSQLSNLE 358
C E H+ C + + VW + F D ++ + L+ K +Q +
Sbjct: 1427 QRCCNADETINHIIFTCSYAQVVWRSANFSGSNRLCFTDNLEENIRLILQGKKNQNLPIL 1486
Query: 359 SGSEQLISYLGFLLWGVWKMRNNGTFRGERPNPVLCLNLAVEASKEFLLETTTEFLPIYG 418
+G L+ + +++W +WK RN F+ P A + + E+ +ET I
Sbjct: 1487 NG---LMPF--WIMWRLWKSRNEYLFQQLDRFPWKVAQKAEQEATEW-VETMVNDTAISH 1540
Query: 419 GHVNRGIR------HWTRPPLGFLKCNTDAGFLRVGNKAAGGYIFKDDKGCFV*GNHRQL 472
R W+ PP GFLKCN D+G+++ + + G+I +D G + +L
Sbjct: 1541 NTAQSNDRPLSRSKQWSSPPEGFLKCNFDSGYVQGRDYTSTGWILRDCNGRVLHSGCAKL 1600
Query: 473 HAA-SALAAEALILREAVFAAMNLNMDRVVFEADNLGLIEACREQREKGEILAIVKDIRK 531
+ SAL AEAL A+ V FE DNL L + + + ++ DIR
Sbjct: 1601 QQSYSALQAEALGFLHALQMVWIRGYCYVWFEGDNLELTNLINKTEDHHLLETLLYDIRF 1660
Query: 532 CKLDFPNWIFSWTRREGNECAHVLARLALCRS-------IPPHW 568
P + RE N A L + A S +PP W
Sbjct: 1661 WMTKLPFSSIGYVNRERNLAADKLTKYANSMSSLYETFHVPPRW 1704
>UniRef100_Q8S6P1 Putative reverse transcriptase [Oryza sativa]
Length = 1509
Score = 201 bits (510), Expect = 6e-50
Identities = 137/516 (26%), Positives = 216/516 (41%), Gaps = 52/516 (10%)
Query: 5 ERKIVKPSWKRNFDQGSGSGLPTYAMAILKFPKQFCHQIASQIARFWWRGNN-DRGIHWK 63
+ K++ + K + +PT+AM + K C QI+ IA++WW D +HW
Sbjct: 981 KEKLLSRAGKEILIKAVAQVIPTFAMGCFELTKDLCDQISKMIAKYWWSNQEKDNKMHWL 1040
Query: 64 NWASLMFSKAEGGMGFKDFAVLNQACLAKQAWRILQEPNAFWASVLKGIYFPNENFLHAK 123
+W L K GG+GF+D + N A LAKQ WR++Q+P++ + VL+ YFP + K
Sbjct: 1041 SWNKLTLPKNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLRAKYFPLGDCFRPK 1100
Query: 124 KKRQASWAWNSIIHGRELILNQGRWSIEDGKSVNLLGHRWLACN-----ERLREGPLDTT 178
+ S+ W SI G ++ N W + DG +N+ W+ R L T
Sbjct: 1101 QTSNVSYTWRSIQKGLRVLQNGMIWRVGDGSKINIWADPWIPRGWSRKPMTPRGANLVTK 1160
Query: 179 VSSLMENQTRTWSISKITSVLSLPDLGRVLQTPIRLTEGEDEIFWPYRDYGQYTIKSGYI 238
V L++ T TW ++ D+ + P+ + E ED + W + G +T+KS Y
Sbjct: 1161 VEELIDPYTGTWDEDLLSQTFWEEDVAAIKSIPVHV-EMEDVLAWHFDARGCFTVKSAYK 1219
Query: 239 QARSHKELEESRGATS----SEPSKECWRSI*SARIPHKIKVFLWKIMHEALPTKVNLRR 294
R + G + W+ + +P KIK FLW++ H L + NL
Sbjct: 1220 VQREMERRASRNGCPGVSNWESGDDDFWKKLWKLGVPGKIKHFLWRMCHNTLALRANLHH 1279
Query: 295 RHCVSETSCPICEAPREDAAHVFLHCPWLRPVWFGSFFQLAPDPSILSLPIWLEAKLSQL 354
R +T C +C EDA H+F C ++ VW + LE S L
Sbjct: 1280 RGMDVDTRCVMCGRYNEDAGHLFFKCKPVKKVW---------------QALNLEELRSML 1324
Query: 355 SNLESGSEQLISYLGFLLWGVWKMRNNGTFRGERPNPVLCLNLAVEASKEFLLETTTEFL 414
SG +L ++ N ER + ++CL ++ E E
Sbjct: 1325 EQQTSGKN--------VLQSIYCRPEN-----ERTSAIVCL-------WQWWKERNEEKS 1364
Query: 415 PIYGGHVNRGIRHWTRPPLGFLKCNTDAGFLRVGNKAAGGYIFKDDKGCFV-*GNHRQLH 473
P G W RPPL F+K NTD + + G++ +D G + G +
Sbjct: 1365 PRTG-----ECAVWRRPPLNFVKINTDGAYSSNMKQGGWGFVIRDQTGAVLQAGAGPAAY 1419
Query: 474 AASALAAEALILREAVFAAMNLNMDRVVFEADNLGL 509
A AE + A+ A M R+ E D++ L
Sbjct: 1420 LQDAFHAEVVACAAAIKTASERGMSRIELETDSMML 1455
>UniRef100_Q9SLE9 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1319
Score = 199 bits (506), Expect = 2e-49
Identities = 151/568 (26%), Positives = 239/568 (41%), Gaps = 25/568 (4%)
Query: 25 LPTYAMAILKFPKQFCHQIASQIARFWWRGNN-DRGIHWKNWASLMFSKAEGGMGFKDFA 83
LP Y M + PK C ++ S + FWW IHW L K+ GG GFKD
Sbjct: 752 LPVYIMTCFRLPKGLCTKLTSVMMDFWWNSMEFSNKIHWIGGKKLTLPKSLGGFGFKDLQ 811
Query: 84 VLNQACLAKQAWRILQEPNAFWASVLKGIYFPNENFLHAKKKRQASWAWNSIIHGRELIL 143
NQA LAKQAWR+ + + + + K YF N +FL+A++ + S+ W SI++GREL+
Sbjct: 812 CFNQALLAKQAWRLFSDSKSIVSQIFKSRYFMNTDFLNARQGTRPSYTWRSILYGRELLN 871
Query: 144 NQGRWSIEDGKSVNLLGHRWLACNERLREGPLDT------TVSSLMENQTRTWSISKITS 197
+ I +G+ N+ +WL R L + VS L++ TR W++ K+T
Sbjct: 872 GGLKRLIGNGEQTNVWIDKWLFDGHSRRPMNLHSLMNIHMKVSHLIDPLTRNWNLKKLTE 931
Query: 198 VLSLPDLGRVL-QTPIRLTEGEDEIFWPYRDYGQYTIKSGYIQARSHKELEESRGATSSE 256
+ D+ ++ Q P L ED W + G YT+KSGY ++ + A
Sbjct: 932 LFHEKDVQLIMHQRP--LISSEDSYCWAGTNNGLYTVKSGYERSSRETFKNLFKEADVYP 989
Query: 257 PSKECWRSI*SARIPHKIKVFLWKIMHEALPTKVNLRRRHCVSETSCPICEAPREDAAHV 316
+ + S KIKVF+WK + AL + LR R + C C+ E H+
Sbjct: 990 SVNPLFDKVWSLETVPKIKVFMWKALKGALAVEDRLRSRGIRTADGCLFCKEEIETINHL 1049
Query: 317 FLHCPWLRPVWFGSFFQLAPDPSILSLPIWLEAKLSQLSNLESGSEQLISYLGFLLWGVW 376
CP+ R VW S Q AP + + Q S + + +LLW +W
Sbjct: 1050 LFQCPFARQVWALSLIQ-APATGFGTSIFSNINHVIQNSQNFGIPRHMRTVSPWLLWEIW 1108
Query: 377 KMRNNGTFRGERPNPVLCLNLAVEASKEFLLETTTEFLPIYGGHVNRGIRHWTRPPLGFL 436
K RN F+G + + +A +E L + G V+ W PP G L
Sbjct: 1109 KNRNKTLFQG---TGLTSSEIVAKAYEECNLWINAQ--EKSSGGVSPSEHKWNPPPAGEL 1163
Query: 437 KCNTDAGFLRVGNKAAGGYIFKDDKGCFV*GNHRQLHAASALAAEALILREAVFAAM-NL 495
KCN + R A ++ +D G + + R +L + + +M +
Sbjct: 1164 KCNIGVAWSRQKQLAGVSWVLRDSMGQVLLHSRRSYSQVYSLFDAKIKSWDWALESMDHF 1223
Query: 496 NMDRVVFEADNLGLIEACREQREKGEILAIVKDIRKCKLDFPNWIFSWTRREGNECAHVL 555
+ D+V F A + +I+A + E ++ + + D +W + N A +
Sbjct: 1224 HFDKVTFAATSHDIIKALHKPNEWPMLIGHIAEFLSFTKDISDWFMMMESTQCNNGAAEI 1283
Query: 556 ARLAL--------CRSIPPHWCAHLPQE 575
A+ + PHW L +E
Sbjct: 1284 AKSVITGMRWQSYVACSFPHWLRSLFEE 1311
>UniRef100_Q94GP2 Putative reverse transcriptase [Oryza sativa]
Length = 1833
Score = 198 bits (504), Expect = 3e-49
Identities = 109/372 (29%), Positives = 185/372 (49%), Gaps = 25/372 (6%)
Query: 25 LPTYAMAILKFPKQFCHQIASQIARFWW-RGNNDRGIHWKNWASLMFSKAEGGMGFKDFA 83
LPTY M + K +FC + FWW N +R +HW W +++ K+ GG+GF+D
Sbjct: 712 LPTYIMGVFKMTDKFCDDYTRMVRNFWWGHDNGERKVHWIAWEKILYPKSHGGLGFRDMK 771
Query: 84 VLNQACLAKQAWRILQEPNAFWASVLKGIYFPNENFLHAKKKRQASWAWNSIIHGRELIL 143
NQA LA+QAWR+L P++ A V K Y+PN N + +S W I HG +L+
Sbjct: 772 CFNQALLARQAWRLLTSPDSLCARVFKAKYYPNGNLVDTAFPTVSSSVWKGIQHGLDLLK 831
Query: 144 NQGRWSIEDGKSVNLLGHRWLACNERL----REGPLDTT-VSSLMENQTRTWSISKITSV 198
W + +G ++ + H+W+ E + ++G V+ L+ + R W+ + + V
Sbjct: 832 QGTIWRVGNGHNIKIWRHKWVPHGEHINVLEKKGRNRLIYVNELINEENRCWNETLVRHV 891
Query: 199 LSLPDLGRVLQTPIRLTEGEDEIFWPYRDYGQYTIKSGYIQA--RSHKELEESRGATSSE 256
L D VL+ + + +D W + G +T+KS Y A S K + +S +T++
Sbjct: 892 LKEEDANEVLKIRLPNHQMDDFPAWHHEKSGLFTVKSAYKLAWNLSGKGVVQSSSSTATS 951
Query: 257 PSKECWRSI*SARIPHKIKVFLWKIMHEALPTKVNLRRRHCVSETSCPICEAPREDAAHV 316
++ W + +A++ K+K+F+WK+ + LPT N RRR +CP+C E++ H
Sbjct: 952 GERKIWSRVWNAKVQAKVKIFIWKLAQDKLPTWENKRRRKIEMNGTCPVCGTKGENSYHA 1011
Query: 317 FLHC-------PWLRPVWFGSFFQLAPDPSILSLPIWLEAKLSQLSNLESGSEQLISYLG 369
+ C LR VW D + + P WL L L+ +E+ +++
Sbjct: 1012 TVECTKARALREALRAVW----HLPGEDKFLWTGPDWL------LILLDGVNEEQRTHIM 1061
Query: 370 FLLWGVWKMRNN 381
++LW W +RN+
Sbjct: 1062 YMLWRAWYLRND 1073
>UniRef100_Q94H40 Putative reverse transcriptase [Oryza sativa]
Length = 1185
Score = 190 bits (483), Expect = 9e-47
Identities = 156/580 (26%), Positives = 252/580 (42%), Gaps = 70/580 (12%)
Query: 5 ERKIVKPSWKRNFDQGSGSGLPTYAMAILKFPKQFCHQIASQIARFWWRGN-NDRGIHWK 63
+ K++ K + +P +AM++ + PK+ C I+ IARFWW + N R IHWK
Sbjct: 598 KEKMLSTGGKEVLIKSIAQAIPVFAMSVFRIPKKICDCISEAIARFWWGDDENHRRIHWK 657
Query: 64 NWASLMFSKAEGGMGFKDFAVLNQACLAKQAWRILQEPNAFWASVLKGIYFPNENFLHAK 123
W + K GG+GF+D N+A LAKQ WR L +P++ A V++ Y+P+ N L A+
Sbjct: 658 AWWRMCIPKQRGGLGFRDLYCFNRAMLAKQIWRFLCDPDSLCARVMRCKYYPDGNILRAR 717
Query: 124 KKRQASWAWNSIIHGRELILNQGRWSIEDGKSVNLLGHRWLACNER-----LREGPLDTT 178
K+ +S+AW SI+ G E W I DG VN+ + + R + T
Sbjct: 718 PKKGSSYAWQSILSGSECFKGY-IWRIGDGSQVNIWEDSLIPSSSNGKVLTPRGRNIITK 776
Query: 179 VSSLMENQTRTWSISKITSVLSLPDLGRVLQTPIRLTEGEDEIFWPYRDYGQYTIKSGYI 238
V L+ + W I ++ D R+LQ PI ED + W + G ++++S Y
Sbjct: 777 VEELINPVSGGWDEDLIDTLFWPIDANRILQIPISAGR-EDFVAWHHTRSGIFSVRSAYH 835
Query: 239 QARSHKELEESR---GATSSEPSKECWRSI*SARIPHKIKVFLWKIMHEALPTKVNLRRR 295
+ K + R GA+SS S+ W ++ IP KIK+F W+++H +P K L +
Sbjct: 836 CQWNAKFGSKERLPDGASSS--SRPVWDNLWKLEIPPKIKIFAWRMLHGVIPCKGILADK 893
Query: 296 HCVSETSCPICEAPREDAAHVFLHCPWLRPVW--FGSFFQLAP----DPSILSLPIWLEA 349
H + CP+C + ED H+ C + +W G + ++ P D S L +
Sbjct: 894 HIAVQGGCPVCSSGVEDIKHMVFTCRRAKLIWKQLGIWSRIQPILGFDRSGSVLVEEMIR 953
Query: 350 KLSQLSNLES-GSEQLISYLGFLLWGVWKMRNNGTFRGERPNPVLCLNLAVEASKEFLLE 408
K ++S+L + G +LI + +W W+ R +GER
Sbjct: 954 KGGKVSHLNAIGMTELILTGAWYIW--WERRQ--LVQGER-------------------- 989
Query: 409 TTTEFLPIYGGHVNRGIRHWTRPPLGFLKCNTDAGFLRVGNKAAG--GYIFKDDKGCFV* 466
I++ R + T+ ++ K +G G + +D G V
Sbjct: 990 ----------------IQNPARSAMSIATLTTN--YMLSNKKGSGGIGVVLRDHLGACVA 1031
Query: 467 GNHRQL-HAASALAAEALILREAVFAAMNLNMDRVVFEADNLGLIEACREQREKGEILAI 525
+ L H A AEA LR+ + A ++ V+ + D + ++ +
Sbjct: 1032 ASQAFLPHVLDAPMAEAFALRDGLSLAQHIGAKNVIVQTDCMQVVSTMMDGGFSATAAMS 1091
Query: 526 VKDIRKCKL---DFPNWIFSWTRREGNECAHVLARLALCR 562
V D CKL F R N+ AH LAR + R
Sbjct: 1092 VFD--DCKLMWDGFGTISIEHCNRNSNQVAHELARCLIGR 1129
>UniRef100_Q8H0A5 Putative reverse transcriptase [Oryza sativa]
Length = 1557
Score = 189 bits (481), Expect = 1e-46
Identities = 127/435 (29%), Positives = 198/435 (45%), Gaps = 42/435 (9%)
Query: 3 RVERKIVKPSWKRNFDQGSGS---------GLPTYAMAILKFPKQFCHQIASQIARFWWR 53
R+ +KI++ W N+ G +P Y M I K P+ C + S FWW
Sbjct: 1140 RIWKKILQ--WGENYLSSGGKEVLIKAVIQAIPVYVMGIFKLPESVCEDLTSLTRNFWWG 1197
Query: 54 GNND-RGIHWKNWASLMFSKAEGGMGFKDFAVLNQACLAKQAWRILQEPNAFWASVLKGI 112
R HWK W SL SK+ GG+GFKD + NQA LA+QAWR++ P++ A VLK
Sbjct: 1198 AEKGKRKTHWKAWKSLTKSKSLGGLGFKDIRLFNQALLARQAWRLIDNPDSLCARVLKAK 1257
Query: 113 YFPNENFLHAKKKRQASWAWNSIIHGRELILNQGRWSIEDGKSVNLLGHRWLACNERLRE 172
Y+PN + + AS W +I HG EL+ W I +G+SV + WL L
Sbjct: 1258 YYPNGSIVDTSFGGNASPGWQAIEHGLELVKKGIIWRIGNGRSVRVWQDPWLP--RDLSR 1315
Query: 173 GPLDTT-------VSSLMENQTRTWSISKITSVLSLPDLGRVLQTPIRLTEGEDEIFWPY 225
P+ V+ LM + W +KI + D+ +L+ + ED I W
Sbjct: 1316 RPITPKNNCRIKWVADLMLD-NGMWDANKINQIFLPVDVEIILKLRTSSRDEEDFIAWHP 1374
Query: 226 RDYGQYTIKSGYIQARSHKELEESRGATSSEPSKECWRSI*SARIPHKIKVFLWKIMHEA 285
G +++++ Y A + + EE+ ++S ++ W + +P K+K+F W+
Sbjct: 1375 DKLGNFSVRTAYRLAENWAK-EEASSSSSDVNIRKAWELLWKCNVPSKVKIFTWRATSNC 1433
Query: 286 LPTKVNLRRRHCVSETSCPICEAPREDAAHVFLHCPWLRPVWF----GSFFQLAPDPSIL 341
LPT N ++R+ +C IC +ED H CP + +W + L D +L
Sbjct: 1434 LPTWDNKKKRNLEISDTCVICGMEKEDTMHALCRCPQAKHLWLAMKESNDLSLRMDDHLL 1493
Query: 342 SLPIWLEAKLSQLSNLESGSEQLISYLGFLLWGVWKMRNNGTFRGERPNPVLCLNLAVEA 401
P WL +L+ L + E ++ LW +W + N G +P+P ++EA
Sbjct: 1494 G-PSWLFNRLALLPDHEQPMFLMV------LWRIWFVHNE-IIHG-KPSP------SIEA 1538
Query: 402 SKEFLLETTTEFLPI 416
S+ FL L I
Sbjct: 1539 SQRFLQSYMKSLLEI 1553
>UniRef100_Q7XUE8 OJ991113_30.21 protein [Oryza sativa]
Length = 541
Score = 189 bits (481), Expect = 1e-46
Identities = 144/537 (26%), Positives = 242/537 (44%), Gaps = 51/537 (9%)
Query: 75 GGMGFKDFAVLNQACLAKQAWRILQEPNAFWASVLKGIYFPNENFLHAKKKRQASWAWNS 134
GG+GF+D + NQA L++QAWR++Q ++ A +LK Y+PN + A S W +
Sbjct: 2 GGLGFRDLRLFNQALLSRQAWRLIQYHDSLCARILKAKYYPNCELIDAVFPADVSPTWKA 61
Query: 135 IIHGRELILNQGRWSIEDGKSVNLLGHRWLACNERLREGPLD-----TTVSSLMENQTRT 189
+ HG EL+ W I DG+ V + +W+ L+ P + V L+ T +
Sbjct: 62 VEHGLELLKKGLIWRIGDGRKVRIWKDQWIPRQSSLKLSPQNGRCRLRWVHQLINQDTNS 121
Query: 190 WSISKITSVLSLPDLGRVLQTPIRLTEGEDEIFWPYRDYGQYTIKSGYIQARSHKELEES 249
W I +V S D+ +L+ + ED + W + G +T++S Y A ++
Sbjct: 122 WDADLIKNVCSPLDVNEILKIKLPHRGMEDFLAWHFEKTGVFTVRSAYHLALHNQLKANE 181
Query: 250 RGATSSEPS--KECWRSI*SARIPHKIKVFLWKIMHEALPTKVNLRRRHCVSETSCPICE 307
G++SS S ++ W S+ +A +P K+K+F W++ E L T N ++R +++C IC
Sbjct: 182 LGSSSSSTSGERKIWASLWTAPVPQKVKIFAWRLARECLATMENRKKRKLEIDSTCRICG 241
Query: 308 APREDAAHVFLHC-------PWLRPVWFGSFFQLAPDPSIL--SLPIWLEAKLSQLSNLE 358
ED H + C +R VW PD L S P WL L + N E
Sbjct: 242 LGGEDGFHAVISCTKAAALRSLIREVW------ELPDERFLIRSGPDWLLIILDSI-NAE 294
Query: 359 SGSEQLISYLGFLLWGVWKMRNNGTFRGERPNPVLCLNLAVEASKEFLLETTTE------ 412
S ++ L+ LLW W +RN+ + + VL L +++ E L +T++
Sbjct: 295 SRAKFLL-----LLWRAWFLRNDSVHCSGKAS-VLGSLLFLQSLWESLFMSTSQGKVDDK 348
Query: 413 -FLPIYGGHVNRGIRH---------WTRP----PLGFLKCNTDAGFLRVGNKAAGGYIFK 458
P+ ++ H WT P P+G++K N D F++ A+ G++ +
Sbjct: 349 GKKPVMQSRLSSPDSHERNHTTTMGWTPPPPPRPMGWVKVNVDGSFIQSSEPASAGFVIR 408
Query: 459 DDKGCFV*GNHRQL-HAASALAAEALILREAVFAAMNLNMDRVVFEADNLGLIEACREQR 517
D G + + R + H SA AEA E V A ++ E D L+
Sbjct: 409 DHTGSVLLTSWRIISHCGSAEEAEATACWEGVNLAAEWVKKPLILETDCANLVSMLTSSG 468
Query: 518 -EKGEILAIVKDIRKCKLDFPNWIFSWTRREGNECAHVLARLALCRSIPPHWCAHLP 573
++ ++ +++ I+ P++ RRE N AH LA+ A+ + W P
Sbjct: 469 FDRAQLCHVLRSIKLLLQALPDFRVQRIRRECNRVAHDLAKFAMRTNHSAVWRMQAP 525
>UniRef100_Q9C697 Reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
Length = 1142
Score = 189 bits (479), Expect = 3e-46
Identities = 145/557 (26%), Positives = 238/557 (42%), Gaps = 25/557 (4%)
Query: 25 LPTYAMAILKFPKQFCHQIASQIARFWWRGNND-RGIHWKNWASLMFSKAEGGMGFKDFA 83
LP Y M+ + PK ++ S +A+FWW N D RG+HW W L SK++GG+GF++
Sbjct: 584 LPRYVMSCFRLPKAITSKLTSAVAKFWWSSNGDSRGMHWMAWDKLCSSKSDGGLGFRNVD 643
Query: 84 VLNQACLAKQAWRILQEPNAFWASVLKGIYFPNENFLHAKKKRQASWAWNSIIHGRELIL 143
N A LAKQ WR++ P++ +A V KG YF N L + K S+ W S+I R L+
Sbjct: 644 DFNSALLAKQLWRLITAPDSLFAKVFKGRYFRKSNPLDSIKSYSPSYGWRSMISARSLVY 703
Query: 144 NQGRWSIEDGKSVNLLGHRWLACN----ERLREGPLDTT--VSSLMENQTRTWSISKITS 197
+ G S+++ W+ + +D + V SL+++++ W+I +
Sbjct: 704 KGLIKRVGSGASISVWNDPWIPAQFPRPAKYGGSIVDPSLKVKSLIDSRSNFWNIDLLKE 763
Query: 198 VLSLPDLGRVLQTPIRLTEGEDEIFWPYRDYGQYTIKSGYIQARSHKELEESRGATSSEP 257
+ D+ + PI ED + W + G YT+KSGY AR L+ + G T P
Sbjct: 764 LFDPEDVPLISALPIGNPNMEDTLGWHFTKAGNYTVKSGYHTAR----LDLNEGTTLIGP 819
Query: 258 SKECWRS-I*SARIPHKIKVFLWKIMHEALPTKVNLRRRHCVSETSCPICEAPREDAAHV 316
++ I + P K++ FLW+I+ +P NLR+R + + C C A E H
Sbjct: 820 DLTTLKAYIWKVQCPPKLRHFLWQILSGCVPVSENLRKRGILCDKGCVSCGASEESINHT 879
Query: 317 FLHCPWLRPVWFGSFFQLAPDPSILSLPIWLEAKLSQLSNLESGSEQLISYLGFLLWGVW 376
C R +W + Q+ P I + SG + + +++W +W
Sbjct: 880 LFQCHPARQIW--ALSQIPTAPGIFPSNSIFTNLDHLFWRIPSGVDS--APYPWIIWYIW 935
Query: 377 KMRNNGTFRGERPNPVLCLNLAVEASKEFLLETTTEFLPIYGGHVNRGIRHWTR-----P 431
K RN F +P+ L LAV+ ++ + E E G ++ R R
Sbjct: 936 KARNEKVFENVDKDPMEILLLAVKEAQSW-QEAQVELHSERHGSLSIDSRIRVRDVSQDT 994
Query: 432 PLGFLKCNTDAGFLRVGNKAAGGYIFKDDKG-CFV*GNHRQLHAASALAAEALILREAVF 490
+C D + + G+ G G + S L E L A+
Sbjct: 995 TFSGFRCFIDGSWKASDQFSGTGWFCLSSLGESPTMGAANVRRSLSPLHTEMEALLWAMK 1054
Query: 491 AAMNLNMDRVVFEADNLGLIEACREQREKGEILAIVKDIRKCKLDFPNWIFSWTRREGNE 550
+ + V F D L++ E +++++ + +F N+ S R N
Sbjct: 1055 CMIGADNQNVAFFTDCSDLVKMVSSPTEWPAFSVYLEELQSDREEFTNFSLSLISRSANV 1114
Query: 551 CAHVLARLALCRSIPPH 567
A LAR R++P H
Sbjct: 1115 KADKLAR--KIRTVPHH 1129
>UniRef100_Q9FJA4 Non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
thaliana]
Length = 1197
Score = 187 bits (476), Expect = 6e-46
Identities = 165/580 (28%), Positives = 253/580 (43%), Gaps = 44/580 (7%)
Query: 3 RVERKIVKPSWKRNFDQGSG---------SGLPTYAMAILKFPKQFCHQIASQIARFWW- 52
++++K + SW F G+G + +P YAM+ P C +I S + RFWW
Sbjct: 601 KIKQKAI--SWSSRFLSGAGKQVMLQSVLTAIPVYAMSCFLLPLSLCDRIQSTLTRFWWD 658
Query: 53 RGNNDRGIHWKNWASLMFSKAEGGMGFKDFAVLNQACLAKQAWRILQEPNAFWASVLKGI 112
+ + R + W W L K GG+GFK+F N A LAKQ+WR+L P+ A VL G
Sbjct: 659 KTDQQRKMCWVGWDRLAVPKVRGGLGFKNFKAYNVALLAKQSWRVLPHPSCLLARVLLGK 718
Query: 113 YFPNENFLHAKKKRQASWAWNSIIHGRELILNQGRWSIEDGKSVNLLGHRWLACNERLRE 172
Y NE+FL A AS W ++ GR+L+ Q W+I + KSV + WLA ++R++
Sbjct: 719 YCQNESFLKALSPTFASHGWRDLLAGRDLLRKQLGWTIGNDKSVLVWQDAWLAHDKRIQP 778
Query: 173 -GPL-----DTTVSSLMENQTRTWSISKITSVLS-LPDLGRVLQTPIRLTEGEDEIFWPY 225
GP D V L + W KI + + + DL VL G D+ W
Sbjct: 779 VGPAPLLSKDWKVKDLFLPNSVDWDEGKIEAAIPFVKDL--VLAIRPSRAGGADKRIWLG 836
Query: 226 RDYGQYTIKSGYIQARSHKELEESRG-ATSSEPSKECWRSI*SARIPHKIKVFLWKIMHE 284
G YT K+GY + + SR S E W + + KI++FLWK +
Sbjct: 837 AKDGLYTTKTGYKATLCDVDSDSSRDPVLSFNWFDEVW----NVQCSPKIRLFLWKAVSG 892
Query: 285 ALPTKVNLRRRHCVSETSCPICEAPREDAAHVFLHCPWLRPVWFGSFFQLAPDPSILSLP 344
ALP L R + C C E ++H +C +++ VW +LAP I
Sbjct: 893 ALPVGSQLAIRIPSFDPVCCRC-GELETSSHALFNCMFVQRVW-----RLAPLEGIDLFL 946
Query: 345 IWLEAK-----LSQLSNLESGSEQLISYLGFLLWGVWKMRNNGTFRGERPNPVLCLNLAV 399
++ + K L + L S + ++ W +W RN F + + +N A+
Sbjct: 947 VFTDVKLGLSWLKKKKTLPSVGLGYCALYPWICWTLWITRNQKVFSNILFSELETINKAI 1006
Query: 400 EASKE--FLLETTTEFLPIYGGHVNRGIRHWTRPPLGFLKCNTDAGFLRVGNKAAGGYIF 457
+ +KE F E + F + G+R L +TDA + + A G+
Sbjct: 1007 QDAKEWQFAQEPNSRFQV----RSSMGLRAEVF-SLNSTVIHTDAAWSVLTCSAGLGWTL 1061
Query: 458 KDDKGCFV*GNHRQLHAASALAAEALILREAVFAAMNLNMDRVVFEADNLGLIEACREQR 517
K + H S L AEAL++ A+++A NL + V+ ++D L A Q
Sbjct: 1062 KSPGIPLKKNSALSEHVPSPLVAEALVVHSALWSAHNLGLHDVILKSDCQVLTMAIISQF 1121
Query: 518 EKGEILAIVKDIRKCKLDFPNWIFSWTRREGNECAHVLAR 557
EI I++DI F ++ R N A LA+
Sbjct: 1122 PLSEIHGILQDITSSSSSFSSFSCCHIPRTANVIADSLAK 1161
>UniRef100_Q7XLZ5 OSJNBa0086O06.14 protein [Oryza sativa]
Length = 1205
Score = 184 bits (468), Expect = 5e-45
Identities = 123/455 (27%), Positives = 192/455 (42%), Gaps = 54/455 (11%)
Query: 25 LPTYAMAILKFPKQFCHQIASQIARFWW-RGNNDRGIHWKNWASLMFSKAEGGMGFKDFA 83
LPTY M + K P++FC + + FWW ++ +HW W L K GG+GF+D
Sbjct: 788 LPTYTMGVFKMPERFCEEYEQLVRNFWWGHEKGEKKVHWIAWEKLTSPKLLGGLGFRDIR 847
Query: 84 VLNQACLAKQAWRILQEPNAFWASVLKGIYFPNENFLHAKKKRQASWAWNSIIHGRELIL 143
NQA LA+QAWR+++ P++ A VLK Y+PN +S W I+HG EL+
Sbjct: 848 CFNQALLARQAWRLIESPDSLCARVLKAKYYPNGTITDTAFPSVSSPTWKGIVHGLELLK 907
Query: 144 NQGRWSIEDGKSVNLLGHRWLACNERLREGPLDT-----TVSSLMENQTRTWSISKITSV 198
W I DG + + W+A E L+ T V L+ T+TW+ I +
Sbjct: 908 KGLIWRIGDGSKTKIWRNHWVAHGENLKILEKKTWNRVIYVRELIVTDTKTWNEPLIRHI 967
Query: 199 LSLPDLGRVLQTPIRLTEGEDEIFWPYRDYGQYTIKSGYIQA--RSHKELEESRGATSSE 256
+ D +L+ I E ED W Y G ++++S Y A + K E++ ++
Sbjct: 968 IREEDADEILKIRIPQREEEDFPAWHYEKTGIFSVRSVYRLAWNLARKTSEQASSSSGGA 1027
Query: 257 PSKECWRSI*SARIPHKIKVFLWKIMHEALPTKVNLRRRHCVSETSCPICEAPREDAAHV 316
++ W ++ A + K++VF WK+ + L T N ++R +CPIC E H
Sbjct: 1028 DGRKIWDNVWKANVQPKVRVFAWKLAQDRLATWENKKKRKIEMFGTCPICGQKEETGFHA 1087
Query: 317 FLHCPW-------LRPVWFGSFFQLAPDPSILSL--PIWLEAKLSQLSNLESGSEQLISY 367
+ C LR W PD S+ S+ P WL L +LS+ + +
Sbjct: 1088 TVECTLAKALRASLREHW------TLPDESLFSMTGPDWLLVLLDRLSSEKKAQLPARKH 1141
Query: 368 LGFLLWGVWKMRNNGTFRGERPNPVLCLNLAVEASKEFLLETTTEFLPIYGGHVNRGIRH 427
+ ++ G + L E K
Sbjct: 1142 ME-------DIKGKGPMFQDPCQKEQTCQLNAEKEK------------------------ 1170
Query: 428 WTRPPLGFLKCNTDAGFLRVGNKAAGGYIFKDDKG 462
W+ PP G K N DA + +A+ G I +D +G
Sbjct: 1171 WSCPPDGSAKLNVDAAYRTETGEASAGIIIRDCRG 1205
>UniRef100_Q7X970 BZIP-like protein [Oryza sativa]
Length = 2367
Score = 181 bits (458), Expect = 7e-44
Identities = 124/464 (26%), Positives = 195/464 (41%), Gaps = 35/464 (7%)
Query: 25 LPTYAMAILKFPKQFCHQIASQIARFWWRG-NNDRGIHWKNWASLMFSKAEGGMGFKDFA 83
+P Y M I K P+ + FWW N R HWK W SL K+ GG+GF+D+
Sbjct: 1534 IPVYVMGIFKLPESVIDDLTKLTKNFWWDSMNGQRKTHWKAWDSLTKPKSLGGLGFRDYR 1593
Query: 84 VLNQACLAKQAWRILQEPNAFWASVLKGIYFPNENFLHAKKKRQASWAWNSIIHGRELIL 143
+ NQA LA+QAWR++ P++ A VLK YFP+ + + +S AW SI +G +L+
Sbjct: 1594 LFNQALLARQAWRLITYPDSLCARVLKAKYFPHGSLIDTSFGSNSSPAWRSIEYGLDLLK 1653
Query: 144 NQGRWSIEDGKSVNLLGHRWLACNERLR--EGPLDTTVS--SLMENQTRTWSISKITSVL 199
W + +G S+ + WL + R G + + S + + +W + KI
Sbjct: 1654 KGIIWRVGNGNSIRIWRDSWLPRDHSRRPITGKANCRLKWVSDLITEDGSWDVPKIHQYF 1713
Query: 200 SLPDLGRVLQTPIRLTEGEDEIFWPYRDYGQYTIKSGYIQARSHKELEESRGATSSEPSK 259
D +L I ED I W G ++++S Y A +EES + ++ +K
Sbjct: 1714 HNLDAEVILNICISSRSEEDFIAWHPDKNGMFSVRSAYRLAAQLVNIEESSSSGTNNINK 1773
Query: 260 ECWRSI*SARIPHKIKVFLWKIMHEALPTKVNLRRRHCVSETSCPICEAPREDAAHVFLH 319
W I ++P K+K+F W++ L T VN ++R C IC+ ED AH
Sbjct: 1774 -AWEMIWKCKVPQKVKIFAWRVASNCLATMVNKKKRKLEQSDMCQICDRENEDDAHALCR 1832
Query: 320 CPWLRPVWF----GSFFQLAPDPSILSLPIWLEAKLSQLSNLESGSEQLISYLGFLLWGV 375
C +W + S+L WL L ++ E + LW
Sbjct: 1833 CIQASQLWSCMHKSGSVSVDIKASVLG-RFWLFDCLEKIPEYEQ------AMFLMTLWRN 1885
Query: 376 WKMRNNGTFRGERPNPVLCLNLAVEASKEFLLET-------------TTEFLPIYGGHVN 422
W +RN G+ P +++ + L + +P+ GG
Sbjct: 1886 WYVRNE-LIHGKSAPPTETSQRFIQSYVDLLFQIRQAPQADLVKGKHVVRTVPLKGGPKY 1944
Query: 423 RGIRH----WTRPPLGFLKCNTDAGFLRVGNKAAGGYIFKDDKG 462
R + + W RP G++K N D F K G I ++ G
Sbjct: 1945 RVLNNHQPCWERPKDGWMKLNVDGSFDASSGKGGLGMILRNSAG 1988
>UniRef100_Q7XCS1 Putative reverse transcriptase [Oryza sativa]
Length = 791
Score = 180 bits (456), Expect = 1e-43
Identities = 133/527 (25%), Positives = 219/527 (41%), Gaps = 36/527 (6%)
Query: 25 LPTYAMAILKFPKQFCHQIASQIARFWWRG-NNDRGIHWKNWASLMFSKAEGGMGFKDFA 83
+P Y M I K P+ + FWW N R HWK W SL K+ GG+GF+D+
Sbjct: 210 IPVYVMGIFKLPESVIDDLTKLTKNFWWDSMNGQRKTHWKAWDSLTKPKSLGGLGFRDYW 269
Query: 84 VLNQACLAKQAWRILQEPNAFWASVLKGIYFPNENFLHAKKKRQASWAWNSIIHGRELIL 143
+ NQA LA+QAWR++ P++ A VLK YFP+ + + +S AW SI +G +L+
Sbjct: 270 LFNQALLARQAWRLITYPDSLCARVLKAKYFPHGSLIDTSFGSNSSPAWRSIEYGLDLLK 329
Query: 144 NQGRWSIEDGKSVNLLGHRWLACNERLR--EGPLDTTVS--SLMENQTRTWSISKITSVL 199
W + +G S+ + WL + R G + + S + + +W + KI
Sbjct: 330 KGIIWRVGNGNSIRIWRDPWLPRDHSRRPITGKANCRLKWVSDLITEDGSWDVPKIHQYF 389
Query: 200 SLPDLGRVLQTPIRLTEGEDEIFWPYRDYGQYTIKSGYIQARSHKELEESRGATSSEPSK 259
D +L I ED I W G ++++S Y A +EES + ++ +K
Sbjct: 390 HNLDAEVILNICISSRSEEDFIAWHPDKNGMFSVRSAYRLAAQLVNIEESSSSGTNNINK 449
Query: 260 ECWRSI*SARIPHKIKVFLWKIMHEALPTKVNLRRRHCVSETSCPICEAPREDAAHVFLH 319
W I ++P K+K+F W++ L T VN ++R C IC+ ED AH
Sbjct: 450 -AWEMIWKCKVPQKVKIFAWRVASNCLATMVNKKKRKLEQSDMCQICDRENEDDAHALCR 508
Query: 320 CPWLRPVWF----GSFFQLAPDPSILSLPIWLEAKLSQLSNLESGSEQLISYLGFLLWGV 375
C +W + S+L WL L ++ E + LW
Sbjct: 509 CIQASQLWSCMHKSGSVSVDIKASVLG-RFWLFDCLEKIPEYEQ------AMFLMTLWRN 561
Query: 376 WKMRNNGTFRGERPNPVLCLNLAVEASKEFLLET-------------TTEFLPIYGGHVN 422
W +RN G+ P +++ + L + +P+ GG
Sbjct: 562 WYVRNE-LIHGKSAPPTETSQRFIQSYVDLLFQIRQAPQADLVKGKHVVRTVPLKGGPKY 620
Query: 423 RGIRH----WTRPPLGFLKCNTDAGFLRVGNKAAGGYIFKDDKGCFV*GNHRQLHAA-SA 477
R + + W RP G++K N D F K G I ++ G + + + L +
Sbjct: 621 RVLNNHQPCWERPKDGWMKLNVDGSFDASSGKGGLGMILRNSAGDIIFTSCKPLERCNNP 680
Query: 478 LAAEALILREAVFAAMNLNMDRVVFEADNLGLIEACREQREKGEILA 524
L +E E + A++ + + E D +++ + +LA
Sbjct: 681 LESELRACVEGLKLAIHWTLLPIQVETDCASVVQLLQGTGRDFSVLA 727
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.324 0.138 0.455
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,031,849,812
Number of Sequences: 2790947
Number of extensions: 43871916
Number of successful extensions: 100046
Number of sequences better than 10.0: 304
Number of HSP's better than 10.0 without gapping: 181
Number of HSP's successfully gapped in prelim test: 123
Number of HSP's that attempted gapping in prelim test: 99303
Number of HSP's gapped (non-prelim): 455
length of query: 584
length of database: 848,049,833
effective HSP length: 133
effective length of query: 451
effective length of database: 476,853,882
effective search space: 215061100782
effective search space used: 215061100782
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 78 (34.7 bits)
Lotus: description of TM0113.14