BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0106.7.5
         (63 letters)

Database: uniref100 
           2,790,947 sequences; 848,049,833 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

UniRef100_Q9SI58 Putative nonsense-mediated mRNA decay protein [...    86  2e-16
UniRef100_Q93ZV6 Putative nonsense-mediated mRNA decay protein [...    86  2e-16
UniRef100_Q7XBY2 Hypothetical protein [Oryza sativa]                   66  2e-10
UniRef100_Q38702 Nondormancy-associated clone AFN2 putative ORF1...    54  8e-07
UniRef100_UPI00003AEEF7 UPI00003AEEF7 UniRef100 entry                  42  0.005
UniRef100_Q7PNZ3 ENSANGP00000021124 [Anopheles gambiae str. PEST]      41  0.007
UniRef100_O46050 CG3460-PA [Drosophila melanogaster]                   40  0.012
UniRef100_Q9UB80 Nmd3 protein [Drosophila melanogaster]                40  0.012
UniRef100_Q6C2G2 Yarrowia lipolytica chromosome F of strain CLIB...    40  0.012
UniRef100_Q6FQY8 Candida glabrata strain CBS138 chromosome I com...    39  0.027
UniRef100_UPI0000249F86 UPI0000249F86 UniRef100 entry                  39  0.045
UniRef100_UPI000023D94F UPI000023D94F UniRef100 entry                  39  0.045
UniRef100_UPI0000337422 UPI0000337422 UniRef100 entry                  38  0.059
UniRef100_UPI000029BD8C UPI000029BD8C UniRef100 entry                  38  0.059
UniRef100_UPI000021AD52 UPI000021AD52 UniRef100 entry                  38  0.059
UniRef100_Q6P2Z6 Hypothetical protein MGC76205 [Xenopus tropicalis]    38  0.059
UniRef100_Q756G7 AER299Cp [Ashbya gossypii]                            38  0.078
UniRef100_UPI0000234B37 UPI0000234B37 UniRef100 entry                  37  0.10
UniRef100_UPI0000364B1B UPI0000364B1B UniRef100 entry                  36  0.23
UniRef100_UPI0000364B1A UPI0000364B1A UniRef100 entry                  36  0.23

>UniRef100_Q9SI58 Putative nonsense-mediated mRNA decay protein [Arabidopsis
           thaliana]
          Length = 516

 Score = 85.9 bits (211), Expect = 2e-16
 Identities = 42/65 (64%), Positives = 54/65 (82%), Gaps = 3/65 (4%)

Query: 1   QFLNDLEENPDLRFNLSLYQNIEFQPSEMASVTDGEELPSVPLEELLADLELG---EDED 57
           +FL DLEENP+LRFN+SLY++ ++Q SE AS+TDGE  PSVP+EELLADL+L    ED+D
Sbjct: 449 EFLRDLEENPELRFNISLYRDKDYQASETASMTDGEGAPSVPIEELLADLDLSFEEEDDD 508

Query: 58  EEDFM 62
           +ED M
Sbjct: 509 DEDDM 513


>UniRef100_Q93ZV6 Putative nonsense-mediated mRNA decay protein [Arabidopsis
           thaliana]
          Length = 516

 Score = 85.9 bits (211), Expect = 2e-16
 Identities = 42/65 (64%), Positives = 54/65 (82%), Gaps = 3/65 (4%)

Query: 1   QFLNDLEENPDLRFNLSLYQNIEFQPSEMASVTDGEELPSVPLEELLADLELG---EDED 57
           +FL DLEENP+LRFN+SLY++ ++Q SE AS+TDGE  PSVP+EELLADL+L    ED+D
Sbjct: 449 EFLRDLEENPELRFNISLYRDKDYQASETASMTDGEGAPSVPIEELLADLDLSFEEEDDD 508

Query: 58  EEDFM 62
           +ED M
Sbjct: 509 DEDDM 513


>UniRef100_Q7XBY2 Hypothetical protein [Oryza sativa]
          Length = 711

 Score = 66.2 bits (160), Expect = 2e-10
 Identities = 31/60 (51%), Positives = 49/60 (81%), Gaps = 2/60 (3%)

Query: 1   QFLNDLEENPDLRFNLSLYQNIEFQPSEMASVTDGEELPSVPLEELLADLELGEDEDEED 60
           +FL DLE N D+RF + LY++ +++ SEMAS T G+++P+VP+EEL+ DL LG+DE+E++
Sbjct: 642 EFLRDLEHNSDIRFQIDLYKDEDYR-SEMAS-TIGDDVPTVPIEELIEDLSLGDDEEEDE 699


>UniRef100_Q38702 Nondormancy-associated clone AFN2 putative ORF1 [Avena fatua]
          Length = 59

 Score = 54.3 bits (129), Expect = 8e-07
 Identities = 25/50 (50%), Positives = 43/50 (86%), Gaps = 2/50 (4%)

Query: 11 DLRFNLSLYQNIEFQPSEMASVTDGEELPSVPLEELLADLELGEDEDEED 60
          +LRF ++LY+N +++ SEMAS T G+++P+VP+EEL+ DL LG+D+++E+
Sbjct: 1  ELRFGINLYKNEDYR-SEMAS-TIGDDVPTVPIEELIEDLSLGDDDEDEE 48


>UniRef100_UPI00003AEEF7 UPI00003AEEF7 UniRef100 entry
          Length = 504

 Score = 41.6 bits (96), Expect = 0.005
 Identities = 21/54 (38%), Positives = 33/54 (60%), Gaps = 3/54 (5%)

Query: 2   FLNDLEENPDLRFNLSLYQNIEFQPSEMASVTDGEELPSVPLEELLADLELGED 55
           FL DLEE+  +R N+++Y+N +     + S TD +  P + L E+L DL + ED
Sbjct: 442 FLEDLEEDEAIRKNVNIYRNADI---PVESDTDDDGAPRISLAEMLEDLHISED 492


>UniRef100_Q7PNZ3 ENSANGP00000021124 [Anopheles gambiae str. PEST]
          Length = 509

 Score = 41.2 bits (95), Expect = 0.007
 Identities = 24/61 (39%), Positives = 39/61 (63%), Gaps = 2/61 (3%)

Query: 1   QFLNDLEENPDLRFNLSLYQNIEFQPSEM-ASVTDGEELPSVPLEELLADLELGEDEDEE 59
           +FL DLEE+P+LR N++++++   Q   +  +  D   +P + LEE+L DL L EDE+  
Sbjct: 450 EFLEDLEEDPELRQNVNIFKDKNKQQIPVDTNDMDDPSVPRITLEEMLDDLVL-EDEEMG 508

Query: 60  D 60
           D
Sbjct: 509 D 509


>UniRef100_O46050 CG3460-PA [Drosophila melanogaster]
          Length = 521

 Score = 40.4 bits (93), Expect = 0.012
 Identities = 22/59 (37%), Positives = 39/59 (65%), Gaps = 3/59 (5%)

Query: 1   QFLNDLEENPDLRFNLSLYQNI-EFQPSEMASVTDGEELPSVPLEELLADLELGEDEDE 58
           +FL+DLEEN D+R  +++Y++  +  P E+ +   G ++P + LEE+L D+ L   +DE
Sbjct: 451 EFLDDLEENEDIRGQVNIYRDTNKTIPIEVQAA--GGDVPQITLEEMLEDMTLECADDE 507


>UniRef100_Q9UB80 Nmd3 protein [Drosophila melanogaster]
          Length = 521

 Score = 40.4 bits (93), Expect = 0.012
 Identities = 22/59 (37%), Positives = 39/59 (65%), Gaps = 3/59 (5%)

Query: 1   QFLNDLEENPDLRFNLSLYQNI-EFQPSEMASVTDGEELPSVPLEELLADLELGEDEDE 58
           +FL+DLEEN D+R  +++Y++  +  P E+ +   G ++P + LEE+L D+ L   +DE
Sbjct: 451 EFLDDLEENEDIRGQVNIYRDTNKTIPIEVQAA--GGDVPQITLEEMLEDMTLECADDE 507


>UniRef100_Q6C2G2 Yarrowia lipolytica chromosome F of strain CLIB99 of Yarrowia
           lipolytica [Yarrowia lipolytica]
          Length = 505

 Score = 40.4 bits (93), Expect = 0.012
 Identities = 26/67 (38%), Positives = 39/67 (57%), Gaps = 11/67 (16%)

Query: 1   QFLNDLEENPDLRFNLSLYQNIEFQPSEM--------ASVTDGEELPSVPLEELLADLE- 51
           QFL +LEE+ +LR  ++LY+    Q   +        AS  +GE +P + ++ELL DLE 
Sbjct: 439 QFLQELEEDTELRGTVNLYKRTVPQMPALPKTGDEMEASEEEGEGVPEIGVDELLDDLED 498

Query: 52  --LGEDE 56
             LG+DE
Sbjct: 499 MSLGQDE 505


>UniRef100_Q6FQY8 Candida glabrata strain CBS138 chromosome I complete sequence
           [Candida glabrata]
          Length = 519

 Score = 39.3 bits (90), Expect = 0.027
 Identities = 23/60 (38%), Positives = 36/60 (59%), Gaps = 2/60 (3%)

Query: 2   FLNDLEENPDLRFNLSLYQNIEFQ-PSEMASVTDGEELPSVPLEELLADL-ELGEDEDEE 59
           FL +LEE+ +LR  ++LY+N     P E     + E+ P + ++ELL +L E+  DE EE
Sbjct: 454 FLQELEEDSELRQTINLYKNQNAAVPQEAHEEEEDEDAPQIDIDELLDELDEMTLDEPEE 513


>UniRef100_UPI0000249F86 UPI0000249F86 UniRef100 entry
          Length = 264

 Score = 38.5 bits (88), Expect = 0.045
 Identities = 21/54 (38%), Positives = 33/54 (60%), Gaps = 1/54 (1%)

Query: 1   QFLNDLEENPDLRFNLSLYQNIEFQPSEMASVTDGEELPSVPLEELLADLELGE 54
           +FL DLEE+  LR N++++++    P E  S TD +  P + L E+L DL L +
Sbjct: 201 EFLEDLEEDEMLRKNINIFRDASKIPVE-ESDTDDDGAPRISLAEMLEDLSLSD 253


>UniRef100_UPI000023D94F UPI000023D94F UniRef100 entry
          Length = 517

 Score = 38.5 bits (88), Expect = 0.045
 Identities = 21/53 (39%), Positives = 32/53 (59%), Gaps = 2/53 (3%)

Query: 1   QFLNDLEENPDLRFNLSLYQNIEFQPSEM--ASVTDGEELPSVPLEELLADLE 51
           QFL D+EE+ +LR  L+LY+  +    EM  A   + +E P V ++ELL D +
Sbjct: 454 QFLRDVEEDEELRATLALYKAQKRAEEEMSVAETEEDDEAPHVDMDELLDDFD 506


>UniRef100_UPI0000337422 UPI0000337422 UniRef100 entry
          Length = 513

 Score = 38.1 bits (87), Expect = 0.059
 Identities = 22/58 (37%), Positives = 34/58 (57%), Gaps = 2/58 (3%)

Query: 2   FLNDLEENPDLRFNLSLYQNIEFQPSEMASVTDGEELPSVPLEELLADLELGEDEDEE 59
           FL DLEE+  LR N++++++    P E  S TD +  P + L E+L +L L +   EE
Sbjct: 451 FLEDLEEDEALRKNVNIFRDASKIPVE--SDTDDDGAPQISLAEMLEELSLTDATGEE 506


>UniRef100_UPI000029BD8C UPI000029BD8C UniRef100 entry
          Length = 549

 Score = 38.1 bits (87), Expect = 0.059
 Identities = 22/58 (37%), Positives = 34/58 (57%), Gaps = 2/58 (3%)

Query: 2   FLNDLEENPDLRFNLSLYQNIEFQPSEMASVTDGEELPSVPLEELLADLELGEDEDEE 59
           FL DLEE+  LR N++++++    P E  S TD +  P + L E+L +L L +   EE
Sbjct: 487 FLEDLEEDEALRKNVNIFRDASKIPVE--SDTDDDGAPQISLAEMLEELSLTDATGEE 542


>UniRef100_UPI000021AD52 UPI000021AD52 UniRef100 entry
          Length = 525

 Score = 38.1 bits (87), Expect = 0.059
 Identities = 23/69 (33%), Positives = 36/69 (51%), Gaps = 11/69 (15%)

Query: 1   QFLNDLEENPDLRFNLSLYQN-----------IEFQPSEMASVTDGEELPSVPLEELLAD 49
           QFL D+EE+ +LR  L+LY+N           +    +EM    + +  P V ++ELL D
Sbjct: 457 QFLRDVEEDEELRATLALYKNTKKTKKPDADAMSVAETEMTYDDEDDNAPKVSMDELLDD 516

Query: 50  LELGEDEDE 58
           +E    ED+
Sbjct: 517 MEELAIEDQ 525


>UniRef100_Q6P2Z6 Hypothetical protein MGC76205 [Xenopus tropicalis]
          Length = 504

 Score = 38.1 bits (87), Expect = 0.059
 Identities = 21/54 (38%), Positives = 31/54 (56%), Gaps = 3/54 (5%)

Query: 2   FLNDLEENPDLRFNLSLYQNIEFQPSEMASVTDGEELPSVPLEELLADLELGED 55
           FL DLEE+  +R N+++Y+N       + S TD E  P + L E+L DL +  D
Sbjct: 442 FLEDLEEDEVIRKNVNIYKNANL---PVESDTDEEGAPRISLAEMLEDLHISLD 492


>UniRef100_Q756G7 AER299Cp [Ashbya gossypii]
          Length = 512

 Score = 37.7 bits (86), Expect = 0.078
 Identities = 22/60 (36%), Positives = 38/60 (62%), Gaps = 2/60 (3%)

Query: 2   FLNDLEENPDLRFNLSLYQNIEFQPSEMASVTDGEELPSVPLEELLADL-ELGEDEDEED 60
           FL +LEE+ ++R  ++LY+N +   SE    TD +E P + ++ELL +L E+  D+  E+
Sbjct: 450 FLQELEEDQEMRQAINLYKNSKPVDSEEMQETD-DEAPQIDIDELLDELDEMNLDDPVEE 508


>UniRef100_UPI0000234B37 UPI0000234B37 UniRef100 entry
          Length = 511

 Score = 37.4 bits (85), Expect = 0.10
 Identities = 21/61 (34%), Positives = 36/61 (58%), Gaps = 5/61 (8%)

Query: 2   FLNDLEENPDLRFNLSLYQNIEFQPSEMASVT-----DGEELPSVPLEELLADLELGEDE 56
           FL D+EE+ +LR  L+LY+N +   +   + T     D +E+P + ++ELL D +  E +
Sbjct: 447 FLRDVEEDQELRATLALYKNKKKDDTMSVADTDMMNDDDDEVPKISMDELLDDFDDLEID 506

Query: 57  D 57
           D
Sbjct: 507 D 507


>UniRef100_UPI0000364B1B UPI0000364B1B UniRef100 entry
          Length = 483

 Score = 36.2 bits (82), Expect = 0.23
 Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 2/51 (3%)

Query: 2   FLNDLEENPDLRFNLSLYQNIEFQPSEMASVTDGEELPSVPLEELLADLEL 52
           FL DLEE+  LR N++++++    P E  S TD +  P + L E+L +L L
Sbjct: 428 FLEDLEEDEALRKNINIFRDASKIPVE--SDTDDDGAPQISLAEMLEELSL 476


>UniRef100_UPI0000364B1A UPI0000364B1A UniRef100 entry
          Length = 503

 Score = 36.2 bits (82), Expect = 0.23
 Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 2/51 (3%)

Query: 2   FLNDLEENPDLRFNLSLYQNIEFQPSEMASVTDGEELPSVPLEELLADLEL 52
           FL DLEE+  LR N++++++    P E  S TD +  P + L E+L +L L
Sbjct: 441 FLEDLEEDEALRKNINIFRDASKIPVE--SDTDDDGAPQISLAEMLEELSL 489


  Database: uniref100
    Posted date:  Jan 5, 2005  1:24 AM
  Number of letters in database: 848,049,833
  Number of sequences in database:  2,790,947
  
Lambda     K      H
   0.310    0.135    0.364 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 116,645,944
Number of Sequences: 2790947
Number of extensions: 4159067
Number of successful extensions: 11092
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 11072
Number of HSP's gapped (non-prelim): 32
length of query: 63
length of database: 848,049,833
effective HSP length: 39
effective length of query: 24
effective length of database: 739,202,900
effective search space: 17740869600
effective search space used: 17740869600
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 68 (30.8 bits)