BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0103.3
(186 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_UPI00002E1F32 UPI00002E1F32 UniRef100 entry 34 2.1
UniRef100_Q64YT8 Hypothetical protein [Bacteroides fragilis] 33 2.8
UniRef100_P41653 Protein ycf2 [Pinus thunbergii] 33 2.8
UniRef100_UPI000033D6C2 UPI000033D6C2 UniRef100 entry 33 3.6
UniRef100_Q66JQ7 RIKEN cDNA 2310043D08 [Mus musculus] 33 3.6
UniRef100_UPI0000305FE5 UPI0000305FE5 UniRef100 entry 33 4.8
UniRef100_UPI00002E1A95 UPI00002E1A95 UniRef100 entry 33 4.8
UniRef100_UPI00002B2499 UPI00002B2499 UniRef100 entry 33 4.8
UniRef100_Q8A1Z4 Hypothetical protein [Bacteroides thetaiotaomic... 33 4.8
UniRef100_UPI0000320F77 UPI0000320F77 UniRef100 entry 32 6.2
UniRef100_UPI00002F8D3D UPI00002F8D3D UniRef100 entry 32 6.2
UniRef100_Q7RKK6 Hypothetical protein [Plasmodium yoelii yoelii] 32 8.1
>UniRef100_UPI00002E1F32 UPI00002E1F32 UniRef100 entry
Length = 246
Score = 33.9 bits (76), Expect = 2.1
Identities = 38/137 (27%), Positives = 57/137 (40%), Gaps = 25/137 (18%)
Query: 56 PCKCHGGIDSLVVPVNFSNSHFLNNKSDQLNIGEWFLESWLVLDFEKECLGNKILEKDMK 115
P GG VV N+ S K L I + FLE L +DFEKE L +K+++
Sbjct: 30 PVSAFGG----VVACNYKIS-----KEIALEINKKFLEVLLAIDFEKEALRILKRKKNLR 80
Query: 116 CENAL-------VSELKLEGKRAGMRSEDVIGSE------TQLRKEVAKWINMFYSFELC 162
N +S EG ++VI + T+L+ ++ + ++F +C
Sbjct: 81 IINISNFKFKNHISIKSFEGSFLIQSKDNVILDKKKLKCVTKLKPSKSELAKIQFAFNIC 140
Query: 163 ---KCKNIVICQNLMII 176
K IVIC N I
Sbjct: 141 KYVKSNAIVICNNFSTI 157
>UniRef100_Q64YT8 Hypothetical protein [Bacteroides fragilis]
Length = 982
Score = 33.5 bits (75), Expect = 2.8
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 51 WWIDPPCKCHGGIDSLVVPVNFSNSHFLNNKSDQLNIGEWFLESWLVLDFEKE 103
WW D P K H + + P +S + + + LN +W L+ W FEKE
Sbjct: 162 WWGDVPVKTHKAL-YVDAPPTYSKTPSVKYRGIFLNDEDWGLKPWAAKTFEKE 213
>UniRef100_P41653 Protein ycf2 [Pinus thunbergii]
Length = 2054
Score = 33.5 bits (75), Expect = 2.8
Identities = 29/114 (25%), Positives = 50/114 (43%), Gaps = 14/114 (12%)
Query: 75 SHFLNNKSDQL--NIGEWFLESWLVLDFEKECLGNKILEKDMKCENALVSELKLEGKRAG 132
S +NK++++ I +WF+ ECL NKI+ +D+ + L + K E
Sbjct: 956 SEMFSNKNEEIFPRIQDWFVT---------ECLKNKIVNEDIDGRSTLSNSSKEEQNIYR 1006
Query: 133 MRSEDVIGSETQLRKEVAKWINMFYSFELCKCKNIVICQNLMIILIANAECYKS 186
+ D I S+ L K W F++ CK ++ L IL+ + + S
Sbjct: 1007 ISQIDSIFSKWDLFKTYMPW---FFTSAWCKYIENMLLDTLSEILLHGSNPFVS 1057
>UniRef100_UPI000033D6C2 UPI000033D6C2 UniRef100 entry
Length = 248
Score = 33.1 bits (74), Expect = 3.6
Identities = 30/123 (24%), Positives = 57/123 (45%), Gaps = 5/123 (4%)
Query: 48 RARWWIDPPCKCHGGIDSLVVPVNFSNSHFLN-NKSDQLNIGEWFLESWLVLDFEKECLG 106
+ WWI G + + + + FLN +K+ +L E++LE+ LD + +
Sbjct: 107 KIEWWIGASTSKEGIRRAARIGDAWYAAPFLNASKAGELL--EYYLEACECLDKKPRPII 164
Query: 107 NK--ILEKDMKCENALVSELKLEGKRAGMRSEDVIGSETQLRKEVAKWINMFYSFELCKC 164
K I+ KD + L +L +G RA R ++G+ Q +++ + + +S C+C
Sbjct: 165 RKDVIVLKDGRKAEELGDQLMEKGYRAMQRDAVIVGNPEQAAEQLRPYKELGFSEVTCRC 224
Query: 165 KNI 167
I
Sbjct: 225 MTI 227
>UniRef100_Q66JQ7 RIKEN cDNA 2310043D08 [Mus musculus]
Length = 1612
Score = 33.1 bits (74), Expect = 3.6
Identities = 28/95 (29%), Positives = 43/95 (44%), Gaps = 9/95 (9%)
Query: 55 PPCKCHGGIDSLVVPVNFSNSHFLNNKSDQLNIGEWFLESWLVLDFEKECLGNKILEKDM 114
P C GI S+ +N S S F+N ++ + GE + LD E+ L D
Sbjct: 1503 PVCSKDPGIGSVAAKLNLSPSQFINEENLPVYPGEILSSDSVSLDIEESVL------IDT 1556
Query: 115 KCENALVSELKLEGKRAGMRS---EDVIGSETQLR 146
+L SE K E RA R+ E+ + +E ++R
Sbjct: 1557 SQRESLPSENKTENCRAQKRTRVEENDVTNEKKIR 1591
>UniRef100_UPI0000305FE5 UPI0000305FE5 UniRef100 entry
Length = 440
Score = 32.7 bits (73), Expect = 4.8
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 75 SHFLNNKSDQLNIGEWFLESWL--VLDFEKECLGNKILEKDMKCENALVSELKLE---GK 129
+HFLN K +++ + + L+ + + + +G + +KD+ EN L SEL L G
Sbjct: 147 THFLNQKGEKVKLDDTKLKEEMRGLSERAMRLIGLAVSDKDLGGENILPSELTLVGVFGL 206
Query: 130 RAGMRSEDVIGSET 143
R MR E + ET
Sbjct: 207 RDEMRKESLTAVET 220
>UniRef100_UPI00002E1A95 UPI00002E1A95 UniRef100 entry
Length = 200
Score = 32.7 bits (73), Expect = 4.8
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Query: 57 CKCHGGIDSLVVPVNFSNSHFLNNKSDQLNIGE-----WFLESWLVLDFEKECLGNKILE 111
CK G + S + +FS+ +F++NK D++ + E W +ES + LG I
Sbjct: 57 CKICGTLKSNSIECSFSDCNFIDNKFDKICVVENISDQWSIESSNIYKGYFHILGGTISS 116
Query: 112 KDMKCENALVSEL 124
E+ LVS L
Sbjct: 117 AGQNKEDLLVSSL 129
>UniRef100_UPI00002B2499 UPI00002B2499 UniRef100 entry
Length = 195
Score = 32.7 bits (73), Expect = 4.8
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Query: 57 CKCHGGIDSLVVPVNFSNSHFLNNKSDQLNIGE-----WFLESWLVLDFEKECLGNKILE 111
CK G + S + +FS+ +F++NK D++ + E W +ES + LG I
Sbjct: 57 CKICGTLKSNSIECSFSDCNFIDNKFDKICVVENISDQWSIESSNIYKGYFHILGGTISS 116
Query: 112 KDMKCENALVSEL 124
E+ LVS L
Sbjct: 117 AGQNKEDLLVSSL 129
>UniRef100_Q8A1Z4 Hypothetical protein [Bacteroides thetaiotaomicron]
Length = 982
Score = 32.7 bits (73), Expect = 4.8
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 51 WWIDPPCKCHGGIDSLVVPVNFSNSHFLNNKSDQLNIGEWFLESWLVLDFEKE 103
WW D P K H + + P S + + + LN +W L+ W FEKE
Sbjct: 162 WWADVPVKKHKTL-YVDAPATLSKTPSVKYRGIFLNDEDWGLKPWAAKTFEKE 213
>UniRef100_UPI0000320F77 UPI0000320F77 UniRef100 entry
Length = 314
Score = 32.3 bits (72), Expect = 6.2
Identities = 21/79 (26%), Positives = 34/79 (42%), Gaps = 4/79 (5%)
Query: 66 LVVPVNFSNSHFLNNK----SDQLNIGEWFLESWLVLDFEKECLGNKILEKDMKCENALV 121
LV+ NFS HF+N +D L I +L W D E +++ + V
Sbjct: 189 LVLNANFSFDHFMNQTNPIYADDLKISSLYLYDWKDKDNNSEIASDELSLVNRGGSWGTV 248
Query: 122 SELKLEGKRAGMRSEDVIG 140
EL++ ++E +IG
Sbjct: 249 QELRISNPTEQFQNEPIIG 267
>UniRef100_UPI00002F8D3D UPI00002F8D3D UniRef100 entry
Length = 244
Score = 32.3 bits (72), Expect = 6.2
Identities = 26/95 (27%), Positives = 41/95 (42%), Gaps = 16/95 (16%)
Query: 43 DGAIVRARWWIDP----------PCKCHGGIDSLV--VPVNFSNSHFLNNKSDQLNIGEW 90
D + R+R+W P K G + L+ + + N H L+N +IG
Sbjct: 54 DWNLSRSRFWGIPLPIWTDEENEEIKVIGSAEELINEIEASVKNGHMLSNPYSDFDIGNM 113
Query: 91 FLESWLVLDFEKECLGNKILE----KDMKCENALV 121
E++L +DF KE + IL K MK E ++
Sbjct: 114 SDENYLNIDFHKEIVDEIILTSSKGKPMKREKDII 148
>UniRef100_Q7RKK6 Hypothetical protein [Plasmodium yoelii yoelii]
Length = 472
Score = 32.0 bits (71), Expect = 8.1
Identities = 27/107 (25%), Positives = 53/107 (49%), Gaps = 8/107 (7%)
Query: 71 NFSNSHFLNNKSDQLNIGEWFLESWLVLDFEKECLGNKILEKDMKCENALVSELKLEGKR 130
N S+ NNKSD+ N + + + L ++ CL N +L+++ ++++LK+
Sbjct: 85 NKSDKKSENNKSDKNNEQDESQDGGIFLIEKELCLRNDLLKEN------ILTKLKININE 138
Query: 131 AGMRSEDVIGSETQLRKEVAKWINMFYSFELCKCKNIVICQNLMIIL 177
+D I +E + K +N Y +EL +C N + +N+ +L
Sbjct: 139 YLYNVKDKIYNEILFAVDKKKLLNK-YIYEL-QCNNFEVLKNIFFLL 183
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.322 0.138 0.439
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 326,085,443
Number of Sequences: 2790947
Number of extensions: 13090742
Number of successful extensions: 25512
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 25510
Number of HSP's gapped (non-prelim): 13
length of query: 186
length of database: 848,049,833
effective HSP length: 120
effective length of query: 66
effective length of database: 513,136,193
effective search space: 33866988738
effective search space used: 33866988738
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 71 (32.0 bits)
Lotus: description of TM0103.3