BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0096b.1
(137 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q9SS17 40S ribosomal protein S24 [Arabidopsis thaliana] 242 1e-63
UniRef100_Q8LC83 40S ribosomal protein S19-like [Arabidopsis tha... 238 2e-62
UniRef100_Q94F06 Hypothetical protein [Arabidopsis thaliana] 236 6e-62
UniRef100_Q5Z9S4 Putative 40S ribosomal protein S24 [Oryza sativa] 229 1e-59
UniRef100_Q6H541 Putative 40S ribosomal protein S24 [Oryza sativa] 228 2e-59
UniRef100_Q8W0C2 Putative 40S ribosomal protein S24 [Oryza sativa] 227 4e-59
UniRef100_Q9FUL7 40S ribosomal protein S24 [Zea mays] 223 7e-58
UniRef100_Q9SCG1 40S ribosomal protein S19 [Cyanophora paradoxa] 183 6e-46
UniRef100_Q962Q6 40S ribosomal protein S24 [Spodoptera frugiperda] 171 4e-42
UniRef100_Q9CQK2 Mus musculus adult male small intestine cDNA, R... 170 7e-42
UniRef100_Q9DCA4 Mus musculus adult male brain cDNA, RIKEN full-... 170 7e-42
UniRef100_Q9D7P1 Splice isoform 2 of P62847 [Homo sapiens] 170 7e-42
UniRef100_Q6PUF7 Ribosomal protein S24 [Bombyx mori] 170 7e-42
UniRef100_Q642J7 Hypothetical protein [Brachydanio rerio] 169 9e-42
UniRef100_P02377 40S ribosomal protein S24 [Xenopus laevis] 169 2e-41
UniRef100_Q7Z3D1 Hypothetical protein DKFZp686N1586 [Homo sapiens] 168 2e-41
UniRef100_P62847 40S ribosomal protein S24 [Homo sapiens] 168 3e-41
UniRef100_Q6Y1Z9 40S ribosomal protein S24 [Pagrus major] 167 4e-41
UniRef100_Q7T2T6 Ribosomal protein [Bothrops jararacussu] 167 6e-41
UniRef100_UPI000024EF11 UPI000024EF11 UniRef100 entry 166 8e-41
>UniRef100_Q9SS17 40S ribosomal protein S24 [Arabidopsis thaliana]
Length = 133
Score = 242 bits (618), Expect = 1e-63
Identities = 116/132 (87%), Positives = 129/132 (96%)
Query: 1 MADKAVTIRTRKFMTNRLLSRKQFIVDVLHPGRANVSKAELKEKLARLYDVKDPNTVFVF 60
MA+KAVTIRTRKFMTNRLLSRKQF++DVLHPGRANVSKAELKEKLAR+Y+VKDPN +FVF
Sbjct: 1 MAEKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFVF 60
Query: 61 KFRTHFGGGKSTGFGLIYDSLENAKKYEPKYRLIRNGLDTKVEKSRKQLKERKNRAKKIR 120
KFRTHFGGGKS+GFGLIYD++E+AKK+EPKYRLIRNGLDTK+EKSRKQ+KERKNRAKKIR
Sbjct: 61 KFRTHFGGGKSSGFGLIYDTVESAKKFEPKYRLIRNGLDTKIEKSRKQIKERKNRAKKIR 120
Query: 121 GVKKTKAADAAK 132
GVKKTKA DA K
Sbjct: 121 GVKKTKAGDAKK 132
>UniRef100_Q8LC83 40S ribosomal protein S19-like [Arabidopsis thaliana]
Length = 133
Score = 238 bits (607), Expect = 2e-62
Identities = 113/132 (85%), Positives = 127/132 (95%)
Query: 1 MADKAVTIRTRKFMTNRLLSRKQFIVDVLHPGRANVSKAELKEKLARLYDVKDPNTVFVF 60
MA+KAVTIRTR FMTNRLL+RKQF++DVLHPGRANVSKAELKEKLAR+Y+VKDPN +F F
Sbjct: 1 MAEKAVTIRTRNFMTNRLLARKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFCF 60
Query: 61 KFRTHFGGGKSTGFGLIYDSLENAKKYEPKYRLIRNGLDTKVEKSRKQLKERKNRAKKIR 120
KFRTHFGGGKS+G+GLIYD++ENAKK+EPKYRLIRNGLDTK+EKSRKQ+KERKNRAKKIR
Sbjct: 61 KFRTHFGGGKSSGYGLIYDTVENAKKFEPKYRLIRNGLDTKIEKSRKQIKERKNRAKKIR 120
Query: 121 GVKKTKAADAAK 132
GVKKTKA DA K
Sbjct: 121 GVKKTKAGDAKK 132
>UniRef100_Q94F06 Hypothetical protein [Arabidopsis thaliana]
Length = 133
Score = 236 bits (603), Expect = 6e-62
Identities = 112/132 (84%), Positives = 126/132 (94%)
Query: 1 MADKAVTIRTRKFMTNRLLSRKQFIVDVLHPGRANVSKAELKEKLARLYDVKDPNTVFVF 60
MA+KAVTIRTR FMTNRLL+RKQF++DVLHPGRANVSKAELKEKLAR+Y+VKDPN +F F
Sbjct: 1 MAEKAVTIRTRNFMTNRLLARKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFCF 60
Query: 61 KFRTHFGGGKSTGFGLIYDSLENAKKYEPKYRLIRNGLDTKVEKSRKQLKERKNRAKKIR 120
KFRTHFGGGKS+G+GLIYD++ENAKK+EPKYRLIRNGLDTK+EKSRKQ+KERKNRAKKIR
Sbjct: 61 KFRTHFGGGKSSGYGLIYDTVENAKKFEPKYRLIRNGLDTKIEKSRKQIKERKNRAKKIR 120
Query: 121 GVKKTKAADAAK 132
GVKKTKA D K
Sbjct: 121 GVKKTKAGDTKK 132
>UniRef100_Q5Z9S4 Putative 40S ribosomal protein S24 [Oryza sativa]
Length = 138
Score = 229 bits (583), Expect = 1e-59
Identities = 115/136 (84%), Positives = 126/136 (92%), Gaps = 3/136 (2%)
Query: 2 ADKAVTIRTRKFMTNRLLSRKQFIVDVLHPGRANVSKAELKEKLARLYDVKDPNTVFVFK 61
A AVT+RTRKFMTNRLLSRKQF+++VLHPGRANVSKA+LKEKLA+LY+VKD N +FVFK
Sbjct: 6 AAAAVTLRTRKFMTNRLLSRKQFVLEVLHPGRANVSKADLKEKLAKLYEVKDSNCIFVFK 65
Query: 62 FRTHFGGGKSTGFGLIYDSLENAKKYEPKYRLIRNGLDTKVEKSRKQLKERKNRAKKIRG 121
FRTHFGGGKSTGFGLIYD+L+ AKKYEPKYRLIRNGL TKVEKSRKQ+KERKNRAKKIRG
Sbjct: 66 FRTHFGGGKSTGFGLIYDNLDAAKKYEPKYRLIRNGLATKVEKSRKQMKERKNRAKKIRG 125
Query: 122 VKKTKAADAAKAGKKK 137
VKKTKA D AGKKK
Sbjct: 126 VKKTKAGD---AGKKK 138
>UniRef100_Q6H541 Putative 40S ribosomal protein S24 [Oryza sativa]
Length = 138
Score = 228 bits (582), Expect = 2e-59
Identities = 114/133 (85%), Positives = 125/133 (93%), Gaps = 3/133 (2%)
Query: 5 AVTIRTRKFMTNRLLSRKQFIVDVLHPGRANVSKAELKEKLARLYDVKDPNTVFVFKFRT 64
AVT+RTRKFMTNRLLSRKQF+++VLHPGRANVSKA+LKEKLA+LY+VKD N +FVFKFRT
Sbjct: 9 AVTLRTRKFMTNRLLSRKQFVLEVLHPGRANVSKADLKEKLAKLYEVKDSNCIFVFKFRT 68
Query: 65 HFGGGKSTGFGLIYDSLENAKKYEPKYRLIRNGLDTKVEKSRKQLKERKNRAKKIRGVKK 124
HFGGGKSTGFGLIYD+L+ AKKYEPKYRLIRNGL TKVEKSRKQ+KERKNRAKKIRGVKK
Sbjct: 69 HFGGGKSTGFGLIYDNLDAAKKYEPKYRLIRNGLATKVEKSRKQMKERKNRAKKIRGVKK 128
Query: 125 TKAADAAKAGKKK 137
TKA D AGKKK
Sbjct: 129 TKAGD---AGKKK 138
>UniRef100_Q8W0C2 Putative 40S ribosomal protein S24 [Oryza sativa]
Length = 138
Score = 227 bits (579), Expect = 4e-59
Identities = 114/136 (83%), Positives = 125/136 (91%), Gaps = 3/136 (2%)
Query: 2 ADKAVTIRTRKFMTNRLLSRKQFIVDVLHPGRANVSKAELKEKLARLYDVKDPNTVFVFK 61
A AVT+RTRKFMTNRLLSRKQF+++V+HPGR NVSKAELKEKLA+LY+VKD N +FVFK
Sbjct: 6 AAAAVTLRTRKFMTNRLLSRKQFVLEVIHPGRPNVSKAELKEKLAKLYEVKDANCIFVFK 65
Query: 62 FRTHFGGGKSTGFGLIYDSLENAKKYEPKYRLIRNGLDTKVEKSRKQLKERKNRAKKIRG 121
FRTHFGGGKSTGFGLIYD+L+ AKKYEPKYRLIRNGL TKVEKSRKQ+KERKNRAKKIRG
Sbjct: 66 FRTHFGGGKSTGFGLIYDNLDAAKKYEPKYRLIRNGLATKVEKSRKQMKERKNRAKKIRG 125
Query: 122 VKKTKAADAAKAGKKK 137
VKKTKA D AGKKK
Sbjct: 126 VKKTKAGD---AGKKK 138
>UniRef100_Q9FUL7 40S ribosomal protein S24 [Zea mays]
Length = 137
Score = 223 bits (568), Expect = 7e-58
Identities = 108/131 (82%), Positives = 122/131 (92%)
Query: 2 ADKAVTIRTRKFMTNRLLSRKQFIVDVLHPGRANVSKAELKEKLARLYDVKDPNTVFVFK 61
A AVT KFMTNRLL+RKQF+++V+HPGRANVSKAELKE+LA++Y+VKDPNT+FVFK
Sbjct: 6 ATSAVTSALGKFMTNRLLARKQFVLEVIHPGRANVSKAELKERLAKMYEVKDPNTIFVFK 65
Query: 62 FRTHFGGGKSTGFGLIYDSLENAKKYEPKYRLIRNGLDTKVEKSRKQLKERKNRAKKIRG 121
FRTHFGGGKSTGFGLIYD+LE+AKK+EPKYRLIRNGL TKVEKSRKQ+KERKNRAKKIRG
Sbjct: 66 FRTHFGGGKSTGFGLIYDNLESAKKFEPKYRLIRNGLATKVEKSRKQMKERKNRAKKIRG 125
Query: 122 VKKTKAADAAK 132
VKKTKA DA K
Sbjct: 126 VKKTKAGDAKK 136
>UniRef100_Q9SCG1 40S ribosomal protein S19 [Cyanophora paradoxa]
Length = 133
Score = 183 bits (465), Expect = 6e-46
Identities = 93/132 (70%), Positives = 106/132 (79%)
Query: 1 MADKAVTIRTRKFMTNRLLSRKQFIVDVLHPGRANVSKAELKEKLARLYDVKDPNTVFVF 60
MADK TIRTRKFMTNRLL+RKQF++DVLHPGRANVSK EL+EKLA++Y V DP V V+
Sbjct: 1 MADKTCTIRTRKFMTNRLLNRKQFVIDVLHPGRANVSKNELREKLAKMYKVDDPARVLVY 60
Query: 61 KFRTHFGGGKSTGFGLIYDSLENAKKYEPKYRLIRNGLDTKVEKSRKQLKERKNRAKKIR 120
FRT FGGGKSTGFGLIYDS+ AKK E K+RL+R G+ RKQ KERKNR KK+R
Sbjct: 61 GFRTGFGGGKSTGFGLIYDSVAFAKKTESKFRLVRIGMGEGKAGGRKQRKERKNRMKKVR 120
Query: 121 GVKKTKAADAAK 132
GVKK KAA A+K
Sbjct: 121 GVKKAKAATASK 132
>UniRef100_Q962Q6 40S ribosomal protein S24 [Spodoptera frugiperda]
Length = 132
Score = 171 bits (432), Expect = 4e-42
Identities = 85/132 (64%), Positives = 104/132 (78%), Gaps = 1/132 (0%)
Query: 1 MADKAVTIRTRKFMTNRLLSRKQFIVDVLHPGRANVSKAELKEKLARLYDVKDPNTVFVF 60
M + TIRTRKFMTNRLL+RKQ + DVLHPG+ VSK E++EKLA++Y V P+ VFVF
Sbjct: 1 MTEGTATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVT-PDVVFVF 59
Query: 61 KFRTHFGGGKSTGFGLIYDSLENAKKYEPKYRLIRNGLDTKVEKSRKQLKERKNRAKKIR 120
F+T+FGGGKSTGF LIYD+L+ AKK+EPK+RL R+GL K +RKQ KERKNR KK+R
Sbjct: 60 GFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVR 119
Query: 121 GVKKTKAADAAK 132
G KK+K AAK
Sbjct: 120 GTKKSKVGAAAK 131
>UniRef100_Q9CQK2 Mus musculus adult male small intestine cDNA, RIKEN full-length
enriched library, clone:2010110L03 product:ribosomal
protein S24, full insert sequence [Mus musculus]
Length = 134
Score = 170 bits (430), Expect = 7e-42
Identities = 86/132 (65%), Positives = 102/132 (77%), Gaps = 5/132 (3%)
Query: 6 VTIRTRKFMTNRLLSRKQFIVDVLHPGRANVSKAELKEKLARLYDVKDPNTVFVFKFRTH 65
VTIRTRKFMTNRLL RKQ ++DVLHPG+A V K E++EKLA++Y P+ +FVF FRTH
Sbjct: 5 VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTT-PDVIFVFGFRTH 63
Query: 66 FGGGKSTGFGLIYDSLENAKKYEPKYRLIRNGLDTKVEKSRKQLKERKNRAKKIRGVKKT 125
FGGGK+TGFG+IYDSL+ AKK EPK+RL R+GL K + SRKQ KERKNR KK+RG K
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGTAKA 123
Query: 126 KAADAAKAGKKK 137
AGKKK
Sbjct: 124 NVG----AGKKK 131
>UniRef100_Q9DCA4 Mus musculus adult male brain cDNA, RIKEN full-length enriched
library, clone:0710005E04 product:ribosomal protein S24,
full insert sequence [Mus musculus]
Length = 131
Score = 170 bits (430), Expect = 7e-42
Identities = 86/132 (65%), Positives = 102/132 (77%), Gaps = 5/132 (3%)
Query: 6 VTIRTRKFMTNRLLSRKQFIVDVLHPGRANVSKAELKEKLARLYDVKDPNTVFVFKFRTH 65
VTIRTRKFMTNRLL RKQ ++DVLHPG+A V K E++EKLA++Y P+ +FVF FRTH
Sbjct: 5 VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYK-STPDVIFVFGFRTH 63
Query: 66 FGGGKSTGFGLIYDSLENAKKYEPKYRLIRNGLDTKVEKSRKQLKERKNRAKKIRGVKKT 125
FGGGK+TGFG+IYDSL+ AKK EPK+RL R+GL K + SRKQ KERKNR KK+RG K
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGTAKA 123
Query: 126 KAADAAKAGKKK 137
AGKKK
Sbjct: 124 NVG----AGKKK 131
>UniRef100_Q9D7P1 Splice isoform 2 of P62847 [Homo sapiens]
Length = 132
Score = 170 bits (430), Expect = 7e-42
Identities = 86/132 (65%), Positives = 102/132 (77%), Gaps = 5/132 (3%)
Query: 6 VTIRTRKFMTNRLLSRKQFIVDVLHPGRANVSKAELKEKLARLYDVKDPNTVFVFKFRTH 65
VTIRTRKFMTNRLL RKQ ++DVLHPG+A V K E++EKLA++Y P+ +FVF FRTH
Sbjct: 5 VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTT-PDVIFVFGFRTH 63
Query: 66 FGGGKSTGFGLIYDSLENAKKYEPKYRLIRNGLDTKVEKSRKQLKERKNRAKKIRGVKKT 125
FGGGK+TGFG+IYDSL+ AKK EPK+RL R+GL K + SRKQ KERKNR KK+RG K
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGTAKA 123
Query: 126 KAADAAKAGKKK 137
AGKKK
Sbjct: 124 NVG----AGKKK 131
>UniRef100_Q6PUF7 Ribosomal protein S24 [Bombyx mori]
Length = 132
Score = 170 bits (430), Expect = 7e-42
Identities = 84/132 (63%), Positives = 105/132 (78%), Gaps = 1/132 (0%)
Query: 1 MADKAVTIRTRKFMTNRLLSRKQFIVDVLHPGRANVSKAELKEKLARLYDVKDPNTVFVF 60
M++ TIRTRKFMTNRLL+RKQ + DVLHPG+ VSK E++EKLA++Y V P+ VFVF
Sbjct: 1 MSEGTATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVT-PDVVFVF 59
Query: 61 KFRTHFGGGKSTGFGLIYDSLENAKKYEPKYRLIRNGLDTKVEKSRKQLKERKNRAKKIR 120
F+T+FGGGKSTGF LIYD+L+ AKK+EPK+RL R+GL K +RKQ KERKNR KK+R
Sbjct: 60 GFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVR 119
Query: 121 GVKKTKAADAAK 132
G KK+K A+K
Sbjct: 120 GTKKSKVGAASK 131
>UniRef100_Q642J7 Hypothetical protein [Brachydanio rerio]
Length = 131
Score = 169 bits (429), Expect = 9e-42
Identities = 87/131 (66%), Positives = 103/131 (78%), Gaps = 4/131 (3%)
Query: 6 VTIRTRKFMTNRLLSRKQFIVDVLHPGRANVSKAELKEKLARLYDVKDPNTVFVFKFRTH 65
VT+RTRKFMTNRLL RKQ IVDVLHPG+A V K E++EKLA++Y P+ VFVF F+T
Sbjct: 5 VTVRTRKFMTNRLLQRKQMIVDVLHPGKATVPKTEIREKLAKMYKTT-PDVVFVFGFKTQ 63
Query: 66 FGGGKSTGFGLIYDSLENAKKYEPKYRLIRNGLDTKVEKSRKQLKERKNRAKKIRGVKKT 125
FGGGK+TGFG+IYDSL+ AKK EPKYRL R+GL K + SRKQ KERKNR KK+RG+KK
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKYRLQRHGLYEKKKTSRKQRKERKNRMKKVRGIKK- 122
Query: 126 KAADAAKAGKK 136
A +GKK
Sbjct: 123 --ASVGASGKK 131
>UniRef100_P02377 40S ribosomal protein S24 [Xenopus laevis]
Length = 132
Score = 169 bits (427), Expect = 2e-41
Identities = 85/132 (64%), Positives = 102/132 (76%), Gaps = 5/132 (3%)
Query: 6 VTIRTRKFMTNRLLSRKQFIVDVLHPGRANVSKAELKEKLARLYDVKDPNTVFVFKFRTH 65
VTIRTRKFMTNRLL RKQ ++DVLHPG+A V K E++EKLA++Y P+ +FVF FRTH
Sbjct: 5 VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTT-PDVIFVFGFRTH 63
Query: 66 FGGGKSTGFGLIYDSLENAKKYEPKYRLIRNGLDTKVEKSRKQLKERKNRAKKIRGVKKT 125
FGGGK+TGFG+IYDSL+ AKK EPK+RL ++GL K + SRKQ KERKNR KK+RG K
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLAKHGLYEKKKTSRKQRKERKNRMKKVRGTAKA 123
Query: 126 KAADAAKAGKKK 137
AGKKK
Sbjct: 124 NVG----AGKKK 131
>UniRef100_Q7Z3D1 Hypothetical protein DKFZp686N1586 [Homo sapiens]
Length = 132
Score = 168 bits (426), Expect = 2e-41
Identities = 85/132 (64%), Positives = 102/132 (76%), Gaps = 5/132 (3%)
Query: 6 VTIRTRKFMTNRLLSRKQFIVDVLHPGRANVSKAELKEKLARLYDVKDPNTVFVFKFRTH 65
VTIRTRKFMTNRLL RKQ ++DVLHPG+A V K E++EKLA++Y P+ +FVF FRTH
Sbjct: 5 VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTT-PDVIFVFGFRTH 63
Query: 66 FGGGKSTGFGLIYDSLENAKKYEPKYRLIRNGLDTKVEKSRKQLKERKNRAKKIRGVKKT 125
FGGGK+TGFG+IYDSL+ AKK EPK+RL R+GL K + SR+Q KERKNR KK+RG K
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSREQRKERKNRMKKVRGTAKA 123
Query: 126 KAADAAKAGKKK 137
AGKKK
Sbjct: 124 NVG----AGKKK 131
>UniRef100_P62847 40S ribosomal protein S24 [Homo sapiens]
Length = 133
Score = 168 bits (425), Expect = 3e-41
Identities = 85/131 (64%), Positives = 101/131 (76%), Gaps = 5/131 (3%)
Query: 6 VTIRTRKFMTNRLLSRKQFIVDVLHPGRANVSKAELKEKLARLYDVKDPNTVFVFKFRTH 65
VTIRTRKFMTNRLL RKQ ++DVLHPG+A V K E++EKLA++Y P+ +FVF FRTH
Sbjct: 5 VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTT-PDVIFVFGFRTH 63
Query: 66 FGGGKSTGFGLIYDSLENAKKYEPKYRLIRNGLDTKVEKSRKQLKERKNRAKKIRGVKKT 125
FGGGK+TGFG+IYDSL+ AKK EPK+RL R+GL K + SRKQ KERKNR KK+RG K
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGTAKA 123
Query: 126 KAADAAKAGKK 136
AGKK
Sbjct: 124 NVG----AGKK 130
>UniRef100_Q6Y1Z9 40S ribosomal protein S24 [Pagrus major]
Length = 131
Score = 167 bits (424), Expect = 4e-41
Identities = 85/131 (64%), Positives = 102/131 (76%), Gaps = 4/131 (3%)
Query: 6 VTIRTRKFMTNRLLSRKQFIVDVLHPGRANVSKAELKEKLARLYDVKDPNTVFVFKFRTH 65
VT+RTRKFMTNRLL RKQ +VDVLHPG+A V K E++EKLA++Y P+ VFVF FRT
Sbjct: 5 VTVRTRKFMTNRLLQRKQMVVDVLHPGKATVPKTEIREKLAKMYKTT-PDVVFVFGFRTQ 63
Query: 66 FGGGKSTGFGLIYDSLENAKKYEPKYRLIRNGLDTKVEKSRKQLKERKNRAKKIRGVKKT 125
FGGGK+TGF ++YDSL+ AKK EPK+RL R+GL K + SRKQ KERKNR KK+RG+KK
Sbjct: 64 FGGGKTTGFAMVYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGIKK- 122
Query: 126 KAADAAKAGKK 136
A AGKK
Sbjct: 123 --ASVGAAGKK 131
>UniRef100_Q7T2T6 Ribosomal protein [Bothrops jararacussu]
Length = 130
Score = 167 bits (422), Expect = 6e-41
Identities = 82/127 (64%), Positives = 99/127 (77%), Gaps = 1/127 (0%)
Query: 6 VTIRTRKFMTNRLLSRKQFIVDVLHPGRANVSKAELKEKLARLYDVKDPNTVFVFKFRTH 65
VTIRTRKFMTNRLL RKQ ++DVLHPG+A V K E++EKLA++Y P+ +FVF FRTH
Sbjct: 5 VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTT-PDVIFVFGFRTH 63
Query: 66 FGGGKSTGFGLIYDSLENAKKYEPKYRLIRNGLDTKVEKSRKQLKERKNRAKKIRGVKKT 125
FGGGK+TGFG+IYDSL+ AKK EPK+RL R+GL K + SRKQ KERKNR KK+RG K
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGTAKA 123
Query: 126 KAADAAK 132
+ K
Sbjct: 124 TVGASKK 130
>UniRef100_UPI000024EF11 UPI000024EF11 UniRef100 entry
Length = 133
Score = 166 bits (421), Expect = 8e-41
Identities = 82/127 (64%), Positives = 98/127 (76%), Gaps = 1/127 (0%)
Query: 6 VTIRTRKFMTNRLLSRKQFIVDVLHPGRANVSKAELKEKLARLYDVKDPNTVFVFKFRTH 65
VTIRTRKFMTNRLL RKQ ++DVLHPG+A V K E++EKLA++Y P+ +FVF FRTH
Sbjct: 5 VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTT-PDVIFVFGFRTH 63
Query: 66 FGGGKSTGFGLIYDSLENAKKYEPKYRLIRNGLDTKVEKSRKQLKERKNRAKKIRGVKKT 125
FGGGK+TGFG+IYDSL+ AKK EPK+RL R+GL K + SRKQ KERKNR KK+RG K
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGTAKA 123
Query: 126 KAADAAK 132
K
Sbjct: 124 NVGVGKK 130
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.318 0.134 0.366
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 205,473,039
Number of Sequences: 2790947
Number of extensions: 8237827
Number of successful extensions: 38119
Number of sequences better than 10.0: 243
Number of HSP's better than 10.0 without gapping: 151
Number of HSP's successfully gapped in prelim test: 92
Number of HSP's that attempted gapping in prelim test: 37666
Number of HSP's gapped (non-prelim): 383
length of query: 137
length of database: 848,049,833
effective HSP length: 113
effective length of query: 24
effective length of database: 532,672,822
effective search space: 12784147728
effective search space used: 12784147728
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 67 (30.4 bits)
Lotus: description of TM0096b.1