BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0091b.10
(353 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q6JJ56 Putative copia-like polyprotein [Ipomoea trifida] 177 4e-43
UniRef100_Q8LME6 Putative retroelement [Oryza sativa] 171 3e-41
UniRef100_Q60DD2 Integrase core domain containing protein [Oryza... 167 5e-40
UniRef100_Q7XTH7 P0041A24.2 protein [Oryza sativa] 164 3e-39
UniRef100_Q7XWX7 OSJNBa0036B17.5 protein [Oryza sativa] 163 8e-39
UniRef100_Q94GB9 Putative copia-type pol polyprotein [Oryza sativa] 162 1e-38
UniRef100_Q8W3H5 Putative polyprotein [Oryza sativa] 162 1e-38
UniRef100_Q8W0U0 Putative copia polyprotein [Sorghum bicolor] 162 2e-38
UniRef100_Q7XVV5 OSJNBa0065J03.17 protein [Oryza sativa] 157 3e-37
UniRef100_Q7XLN3 OSJNBa0049H08.8 protein [Oryza sativa] 157 4e-37
UniRef100_Q7X6J5 OSJNBb0067G11.4 protein [Oryza sativa] 155 1e-36
UniRef100_Q9LIZ0 Similar to putative copia polyprotein [Oryza sa... 154 3e-36
UniRef100_Q9LH08 Copia-type pol polyprotein-like [Arabidopsis th... 142 1e-32
UniRef100_Q9LKS9 Hypothetical protein T15F17.l [Arabidopsis thal... 140 4e-32
UniRef100_Q7Y0F5 Putative polyprotein [Oryza sativa] 132 2e-29
UniRef100_Q6AV62 Zinc knuckle domain containing protein [Oryza s... 119 1e-25
UniRef100_Q949J4 Putative copia-like polyprotein [Lycopersicon e... 116 8e-25
UniRef100_Q9FWZ7 F11O6.4 protein [Arabidopsis thaliana] 114 3e-24
UniRef100_Q7XP95 OSJNBa0021F22.5 protein [Oryza sativa] 101 3e-20
UniRef100_Q7PUH9 ENSANGP00000020845 [Anopheles gambiae str. PEST] 95 3e-18
>UniRef100_Q6JJ56 Putative copia-like polyprotein [Ipomoea trifida]
Length = 1190
Score = 177 bits (449), Expect = 4e-43
Identities = 85/144 (59%), Positives = 114/144 (79%), Gaps = 1/144 (0%)
Query: 63 FCLALSIEYLKDEVFMYQRTYIAKVLKGFYMDKSCPLCTLLVLRSLNVNKDPFRP*EKNE 122
FCL L IE+L + +F++Q Y+ K+L+ FYMDKS PL T +V+RSL +KDPFRP E NE
Sbjct: 879 FCLGLQIEHLPNGIFIHQANYVNKLLEKFYMDKSHPLSTPMVVRSLEADKDPFRPKEDNE 938
Query: 123 ELLDPEVPYLSAIKALLYLASHTRLDISFAINLLARYSSSPTQRHWNG-KQVFRYLKGAL 181
++L PEVPYLSAI ALLYLA+ TR DI+F++NLLAR+S+SPT+RHW+G K +FRYL+G
Sbjct: 939 DILGPEVPYLSAIGALLYLANCTRPDIAFSVNLLARFSASPTRRHWSGVKHIFRYLQGTK 998
Query: 182 DMSLFFPFMSKLNLIGYADAGYLS 205
D+ L+F + L+GY+DAGY+S
Sbjct: 999 DLGLYFENNQDITLMGYSDAGYMS 1022
>UniRef100_Q8LME6 Putative retroelement [Oryza sativa]
Length = 852
Score = 171 bits (433), Expect = 3e-41
Identities = 97/194 (50%), Positives = 128/194 (65%), Gaps = 4/194 (2%)
Query: 16 CIFMMRYEIVYVIINVY--DNNLLRL*KSSQKL*IC*RKNLR*KS*-E*NFCLALSIEYL 72
C+FM R E + II+VY D N++ + ++ + K + +CL L +E+
Sbjct: 498 CLFMKRSEHGFCIISVYVDDLNIIGTTQVIKEASSYLKTEFEMKELGKTTYCLGLQLEHT 557
Query: 73 KDEVFMYQRTYIAKVLKGFYMDKSCPLCTLLVLRSLNVNKDPFRP*EKNEELLDPEVPYL 132
+ V ++Q YI K+L+ F M S P T +V+RSL V DPFRP E NEELL PE PYL
Sbjct: 558 PEGVLLHQYAYIQKILEKFNMKDSYPTRTPMVVRSLAVESDPFRPQENNEELLGPECPYL 617
Query: 133 SAIKALLYLASHTRLDISFAINLLARYSSSPTQRHWNG-KQVFRYLKGALDMSLFFPFMS 191
SAI AL+YLA+ TR DI+FA+NLLAR+SS+PT+RHWNG KQ+FRYL+G D+ LFF
Sbjct: 618 SAIGALMYLANGTRPDIAFAVNLLARFSSAPTKRHWNGVKQIFRYLRGTQDLGLFFRKNQ 677
Query: 192 KLNLIGYADAGYLS 205
L + GYADAGYLS
Sbjct: 678 DLTMAGYADAGYLS 691
>UniRef100_Q60DD2 Integrase core domain containing protein [Oryza sativa]
Length = 1419
Score = 167 bits (422), Expect = 5e-40
Identities = 96/204 (47%), Positives = 134/204 (65%), Gaps = 5/204 (2%)
Query: 6 GRSQNDPTNSCIFMMRYEIVYVIINVY--DNNLLRL*KSSQKL*IC*RKNLR*KS*-E*N 62
G + ND C+F+ + E + II+VY D N++ + ++ + K +
Sbjct: 1056 GYANNDDC-LCVFIKKSENGFCIISVYVDDLNIIGTTRDIEEASTYLKAEFEMKDLGKTK 1114
Query: 63 FCLALSIEYLKDEVFMYQRTYIAKVLKGFYMDKSCPLCTLLVLRSLNVNKDPFRP*EKNE 122
FCL L +E+L VF++Q TY KVL+ F MDKS PL T +V+RSL V+KDPFRP E++E
Sbjct: 1115 FCLGLQLEHLPKGVFVHQSTYTKKVLEMFNMDKSHPLKTPMVVRSLEVDKDPFRPKEEDE 1174
Query: 123 ELLDPEVPYLSAIKALLYLASHTRLDISFAINLLARYSSSPTQRHWNG-KQVFRYLKGAL 181
+ L PEVPYLSAI L+YL + TR DI+FA+NLLARYS++PT+RHW G K + +YL+G
Sbjct: 1175 KPLGPEVPYLSAIGPLMYLTNCTRPDIAFAVNLLARYSAAPTRRHWVGVKTILKYLQGTR 1234
Query: 182 DMSLFFPFMSKLNLIGYADAGYLS 205
D+ L+FP L + GY DAGY+S
Sbjct: 1235 DLGLWFPRKGDLTMEGYVDAGYMS 1258
>UniRef100_Q7XTH7 P0041A24.2 protein [Oryza sativa]
Length = 1376
Score = 164 bits (416), Expect = 3e-39
Identities = 81/144 (56%), Positives = 109/144 (75%), Gaps = 1/144 (0%)
Query: 63 FCLALSIEYLKDEVFMYQRTYIAKVLKGFYMDKSCPLCTLLVLRSLNVNKDPFRP*EKNE 122
FCL L +E+L + VFM+Q TY +VL F MDK PL T +V+RSL +KDPF+P E +E
Sbjct: 1072 FCLGLQLEHLPEGVFMHQSTYTKRVLGKFNMDKCHPLKTPMVVRSLEADKDPFKPKEDDE 1131
Query: 123 ELLDPEVPYLSAIKALLYLASHTRLDISFAINLLARYSSSPTQRHWNG-KQVFRYLKGAL 181
++L PEVPYL+AI AL+YLA+ TR DI+FA+NLLARYS++PT+RHW G K + RYL+G
Sbjct: 1132 KVLGPEVPYLNAIGALMYLANCTRPDIAFAVNLLARYSAAPTRRHWVGVKTILRYLRGTQ 1191
Query: 182 DMSLFFPFMSKLNLIGYADAGYLS 205
D+ L+FP +++GY DAGY+S
Sbjct: 1192 DLGLWFPKNQDPSMVGYVDAGYMS 1215
>UniRef100_Q7XWX7 OSJNBa0036B17.5 protein [Oryza sativa]
Length = 443
Score = 163 bits (412), Expect = 8e-39
Identities = 82/144 (56%), Positives = 104/144 (71%), Gaps = 1/144 (0%)
Query: 63 FCLALSIEYLKDEVFMYQRTYIAKVLKGFYMDKSCPLCTLLVLRSLNVNKDPFRP*EKNE 122
FCL L +E+L + ++Q Y K+L+ F MDKS P T +V+RSL+V KDPFRP E E
Sbjct: 136 FCLGLQLEHLPSGILVHQSAYAQKMLEKFNMDKSYPSKTPMVVRSLDVEKDPFRPKEDGE 195
Query: 123 ELLDPEVPYLSAIKALLYLASHTRLDISFAINLLARYSSSPTQRHWNG-KQVFRYLKGAL 181
++L P+ PYLSAI AL+YLA+ TR DI+F++NLLARYS++PT+RHW G K VFRYL G
Sbjct: 196 DVLGPDFPYLSAIGALMYLANSTRPDIAFSVNLLARYSAAPTKRHWTGVKNVFRYLNGTR 255
Query: 182 DMSLFFPFMSKLNLIGYADAGYLS 205
D+ LFF LIGY DAGYLS
Sbjct: 256 DLGLFFKKNQGSTLIGYTDAGYLS 279
>UniRef100_Q94GB9 Putative copia-type pol polyprotein [Oryza sativa]
Length = 1225
Score = 162 bits (411), Expect = 1e-38
Identities = 80/144 (55%), Positives = 109/144 (75%), Gaps = 1/144 (0%)
Query: 63 FCLALSIEYLKDEVFMYQRTYIAKVLKGFYMDKSCPLCTLLVLRSLNVNKDPFRP*EKNE 122
FCL L +++L + VFM+Q TY +VL F MDK PL T +V+RSL +KDPF+P E +E
Sbjct: 921 FCLGLQLKHLPEGVFMHQSTYTKRVLGKFNMDKCHPLKTPMVVRSLEADKDPFKPKEDDE 980
Query: 123 ELLDPEVPYLSAIKALLYLASHTRLDISFAINLLARYSSSPTQRHWNG-KQVFRYLKGAL 181
E+L PEVPYLSAI AL+YLA+ TR +I+FA+NLLARYS++PT+RHW G K + +YL+G
Sbjct: 981 EVLGPEVPYLSAIGALMYLANCTRPNIAFAVNLLARYSATPTRRHWVGVKTILKYLRGTQ 1040
Query: 182 DMSLFFPFMSKLNLIGYADAGYLS 205
D+ L+FP +++GY DAGY+S
Sbjct: 1041 DLGLWFPKNQDPSMVGYVDAGYMS 1064
>UniRef100_Q8W3H5 Putative polyprotein [Oryza sativa]
Length = 419
Score = 162 bits (411), Expect = 1e-38
Identities = 83/144 (57%), Positives = 106/144 (72%), Gaps = 1/144 (0%)
Query: 63 FCLALSIEYLKDEVFMYQRTYIAKVLKGFYMDKSCPLCTLLVLRSLNVNKDPFRP*EKNE 122
FCL L +E+L + + ++Q TY KVL+ F M K+ PL T +V+RSL+ +KD FRP + E
Sbjct: 111 FCLVLQVEHLPNGILVHQSTYTKKVLERFNMSKAHPLKTPMVVRSLDKDKDLFRPRSETE 170
Query: 123 ELLDPEVPYLSAIKALLYLASHTRLDISFAINLLARYSSSPTQRHWNG-KQVFRYLKGAL 181
E L PE+PYLSAI AL+YLA+ TR DI+F +NLLARYS SPT+RHW G K V RYL+G
Sbjct: 171 EELGPEIPYLSAIGALMYLANCTRPDIAFVVNLLARYSVSPTRRHWVGVKTVLRYLQGTQ 230
Query: 182 DMSLFFPFMSKLNLIGYADAGYLS 205
D+ LFFP L ++GYADAGYLS
Sbjct: 231 DLGLFFPRQRDLTMVGYADAGYLS 254
>UniRef100_Q8W0U0 Putative copia polyprotein [Sorghum bicolor]
Length = 1082
Score = 162 bits (409), Expect = 2e-38
Identities = 78/144 (54%), Positives = 106/144 (73%), Gaps = 1/144 (0%)
Query: 63 FCLALSIEYLKDEVFMYQRTYIAKVLKGFYMDKSCPLCTLLVLRSLNVNKDPFRP*EKNE 122
FCL L +E+L +F++Q Y+ KVL+ F MDK+ P T +V+RSL +N DPFRP ++ E
Sbjct: 825 FCLGLQLEHLSTGIFVHQSAYVQKVLERFNMDKAYPSKTPMVVRSLGLNTDPFRPQDEGE 884
Query: 123 ELLDPEVPYLSAIKALLYLASHTRLDISFAINLLARYSSSPTQRHWNG-KQVFRYLKGAL 181
E+L P VPYLSA+ AL+YLA+ TR DI+FA+NLLAR+S++PT+RHW G KQ+ RY+ G
Sbjct: 885 EILGPHVPYLSAVGALMYLANSTRPDIAFAVNLLARHSAAPTKRHWTGVKQILRYVNGTR 944
Query: 182 DMSLFFPFMSKLNLIGYADAGYLS 205
D+ LFF + +IGY DAGY S
Sbjct: 945 DLGLFFQRGTNPEMIGYTDAGYQS 968
>UniRef100_Q7XVV5 OSJNBa0065J03.17 protein [Oryza sativa]
Length = 864
Score = 157 bits (398), Expect = 3e-37
Identities = 79/144 (54%), Positives = 101/144 (69%), Gaps = 1/144 (0%)
Query: 63 FCLALSIEYLKDEVFMYQRTYIAKVLKGFYMDKSCPLCTLLVLRSLNVNKDPFRP*EKNE 122
FCL L +E+L + ++Q Y K+L+ F MDKS P +V+RSL+V KDPFRP E E
Sbjct: 557 FCLGLQLEHLPSGILVHQSAYTQKILEKFNMDKSYPSKIPMVVRSLDVEKDPFRPKEDGE 616
Query: 123 ELLDPEVPYLSAIKALLYLASHTRLDISFAINLLARYSSSPTQRHWNG-KQVFRYLKGAL 181
++L P+ PYLSAI AL+YLA+ TR DI+F++NLLARYS++PT+ HW G K VFRYL G
Sbjct: 617 DVLGPDFPYLSAIGALMYLANSTRPDIAFSVNLLARYSAAPTKHHWTGVKNVFRYLNGTR 676
Query: 182 DMSLFFPFMSKLNLIGYADAGYLS 205
D+ LFF LIGY DA YLS
Sbjct: 677 DLGLFFKKNQDSTLIGYTDASYLS 700
>UniRef100_Q7XLN3 OSJNBa0049H08.8 protein [Oryza sativa]
Length = 810
Score = 157 bits (397), Expect = 4e-37
Identities = 79/144 (54%), Positives = 102/144 (69%), Gaps = 1/144 (0%)
Query: 63 FCLALSIEYLKDEVFMYQRTYIAKVLKGFYMDKSCPLCTLLVLRSLNVNKDPFRP*EKNE 122
FCL L +++L + ++Q Y K+L+ F MDKS P T +V+RSL+V KDPFRP E E
Sbjct: 660 FCLGLQLDHLPSRILVHQSAYTQKILEKFNMDKSYPSKTPMVVRSLDVEKDPFRPKEYGE 719
Query: 123 ELLDPEVPYLSAIKALLYLASHTRLDISFAINLLARYSSSPTQRHWNG-KQVFRYLKGAL 181
++L P+ PYLSAI AL+YLA+ TR DI+F++NLLARYS++PT+RHW K VFRYL G
Sbjct: 720 DVLGPDFPYLSAIGALMYLANSTRPDIAFSVNLLARYSAAPTKRHWTEVKNVFRYLNGTR 779
Query: 182 DMSLFFPFMSKLNLIGYADAGYLS 205
D+ LFF LIGY DA YLS
Sbjct: 780 DLGLFFKKNQDSTLIGYTDARYLS 803
>UniRef100_Q7X6J5 OSJNBb0067G11.4 protein [Oryza sativa]
Length = 986
Score = 155 bits (393), Expect = 1e-36
Identities = 78/144 (54%), Positives = 107/144 (74%), Gaps = 1/144 (0%)
Query: 63 FCLALSIEYLKDEVFMYQRTYIAKVLKGFYMDKSCPLCTLLVLRSLNVNKDPFRP*EKNE 122
FCL L +E+L + VFM+Q TY +VL F M+K PL T +V++SL +KDPF+P E +E
Sbjct: 836 FCLDLQLEHLPEGVFMHQSTYTKRVLGKFNMNKCHPLKTPMVVQSLEADKDPFKPKEDDE 895
Query: 123 ELLDPEVPYLSAIKALLYLASHTRLDISFAINLLARYSSSPTQRHWNG-KQVFRYLKGAL 181
E+L PEVPYLSAI AL+YLA+ TR DI FA+NLLARYS++PT+RHW G K + YL+G
Sbjct: 896 EVLGPEVPYLSAIGALMYLANCTRPDIVFAVNLLARYSATPTRRHWVGVKTILTYLRGTQ 955
Query: 182 DMSLFFPFMSKLNLIGYADAGYLS 205
D+ L+FP +++GY +AG++S
Sbjct: 956 DLGLWFPKNQDPSMVGYVNAGHMS 979
>UniRef100_Q9LIZ0 Similar to putative copia polyprotein [Oryza sativa]
Length = 1321
Score = 154 bits (390), Expect = 3e-36
Identities = 82/153 (53%), Positives = 107/153 (69%), Gaps = 12/153 (7%)
Query: 63 FCLALSIEYLKDEVFMYQRTYIAKVLKGFYMDKSCPLCTLLVLRSLNVNKDPFRP*EKNE 122
+CL L +E+ + V ++Q YI K+L+ F + S P T +V+RSL V DPFRP E N+
Sbjct: 1078 YCLGLQLEHTHEGVLLHQSAYIQKILEKFNIKDSYPTRTPMVVRSLAVESDPFRPQENNQ 1137
Query: 123 ELLDPEVPYLSAIKALLYLASHTRLDISFAINLLARYSSSPTQRHWNG-KQVFRYLKGAL 181
ELL PE PYLSAI AL+YLA+ TR DI+FA+NLLAR+SS+PT+RHWNG K++FRYL+G
Sbjct: 1138 ELLGPECPYLSAIGALMYLANGTRPDIAFAVNLLARFSSAPTKRHWNGVKKIFRYLRGTQ 1197
Query: 182 DMSLFFPFMSKLNLIGYADAGYLS---KYLKQV 211
D+ L + GYADAGYLS K L Q+
Sbjct: 1198 DLD--------LTMTGYADAGYLSDPHKALSQI 1222
>UniRef100_Q9LH08 Copia-type pol polyprotein-like [Arabidopsis thaliana]
Length = 1123
Score = 142 bits (359), Expect = 1e-32
Identities = 81/179 (45%), Positives = 116/179 (64%), Gaps = 5/179 (2%)
Query: 9 QNDPTNSCIFMMRYEIV-YVIINVY--DNNLLRL*KSSQKL*IC*RKNLR*KS*-E*NFC 64
+NDP + CIF+ ++ +VII VY D N+L + +K K + FC
Sbjct: 787 KNDPISPCIFIKKFASKGFVIIAVYVDDLNILGTSGEIAQTVEYLKKEFEMKDLGKTKFC 846
Query: 65 LALSIEYLKDEVFMYQRTYIAKVLKGFYMDKSCPLCTLLVLRSLNVNKDPFRP*EKNEEL 124
L L +EY+ + ++Q+ Y VLK F MDK+ PL + + +RSL ++ DPF P + +EE+
Sbjct: 847 LGLQLEYIDKGILVHQKAYTETVLKRFNMDKAHPLTSPMQVRSLGLDSDPFGPKKDDEEI 906
Query: 125 LDPEVPYLSAIKALLYLASHTRLDISFAINLLARYSSSPTQRHWNG-KQVFRYLKGALD 182
L PE+PYLSAI AL+YL+SHTR DI FA+NLL+R+SS PT+RHW G K + RYL+G +D
Sbjct: 907 LGPEMPYLSAIGALMYLSSHTRPDICFAVNLLSRFSSCPTKRHWEGIKHLLRYLQGTID 965
>UniRef100_Q9LKS9 Hypothetical protein T15F17.l [Arabidopsis thaliana]
Length = 1141
Score = 140 bits (354), Expect = 4e-32
Identities = 80/179 (44%), Positives = 115/179 (63%), Gaps = 5/179 (2%)
Query: 9 QNDPTNSCIFMMRYEIV-YVIINVY--DNNLLRL*KSSQKL*IC*RKNLR*KS*-E*NFC 64
+NDP + CIF+ ++ +VII VY D N+L + +K K + FC
Sbjct: 787 KNDPISPCIFIKKFASKGFVIIAVYVDDLNILGTSGEIAQTVEYLKKEFEMKDLGKTKFC 846
Query: 65 LALSIEYLKDEVFMYQRTYIAKVLKGFYMDKSCPLCTLLVLRSLNVNKDPFRP*EKNEEL 124
L L +EY+ + ++QR Y +LK F MDK+ PL + + +RSL ++ DPF P + +EE+
Sbjct: 847 LGLQLEYVDKGILVHQRAYTETILKRFNMDKAHPLTSPMQVRSLGLDSDPFGPKKDDEEI 906
Query: 125 LDPEVPYLSAIKALLYLASHTRLDISFAINLLARYSSSPTQRHWNG-KQVFRYLKGALD 182
L PE+PYLSAI A +YL+SHTR DI FA+NLL+R+SS PT+RHW G K + RYL+G +D
Sbjct: 907 LGPEMPYLSAIGAWMYLSSHTRPDICFAVNLLSRFSSCPTKRHWEGIKHLLRYLQGTID 965
>UniRef100_Q7Y0F5 Putative polyprotein [Oryza sativa]
Length = 639
Score = 132 bits (331), Expect = 2e-29
Identities = 67/112 (59%), Positives = 82/112 (72%), Gaps = 1/112 (0%)
Query: 95 KSCPLCTLLVLRSLNVNKDPFRP*EKNEELLDPEVPYLSAIKALLYLASHTRLDISFAIN 154
KS P T +V+RSL+V KDPFRP E E++L P+ PYLSAI AL+Y A+ TR DI+F++
Sbjct: 445 KSYPSKTPMVVRSLDVEKDPFRPKEDGEDVLGPDFPYLSAIGALMYFANSTRPDIAFSVK 504
Query: 155 LLARYSSSPTQRHWNG-KQVFRYLKGALDMSLFFPFMSKLNLIGYADAGYLS 205
LLARYS++PT+RHW G K VFRYL G D+ LFF LIGY DAGYLS
Sbjct: 505 LLARYSAAPTKRHWTGVKNVFRYLNGTRDLGLFFKKNQDSTLIGYTDAGYLS 556
>UniRef100_Q6AV62 Zinc knuckle domain containing protein [Oryza sativa]
Length = 1329
Score = 119 bits (298), Expect = 1e-25
Identities = 57/96 (59%), Positives = 76/96 (78%), Gaps = 1/96 (1%)
Query: 111 NKDPFRP*EKNEELLDPEVPYLSAIKALLYLASHTRLDISFAINLLARYSSSPTQRHWNG 170
+KDPF+P + +EE+L PEVPYLSAI AL+YLA TR DI+FA+NLLARYS++PT+RHW G
Sbjct: 1071 DKDPFKPKKDDEEMLGPEVPYLSAIGALMYLAYCTRPDIAFALNLLARYSATPTRRHWVG 1130
Query: 171 -KQVFRYLKGALDMSLFFPFMSKLNLIGYADAGYLS 205
K + RYL+G D+ L+FP +++GY DAGY+S
Sbjct: 1131 VKTILRYLRGTQDLGLWFPKNQDPSMVGYVDAGYMS 1166
>UniRef100_Q949J4 Putative copia-like polyprotein [Lycopersicon esculentum]
Length = 779
Score = 116 bits (291), Expect = 8e-25
Identities = 69/147 (46%), Positives = 91/147 (60%), Gaps = 3/147 (2%)
Query: 9 QNDPTNSCIFMMRYEIVYVIINVY--DNNLLRL*KSSQKL*IC*RKNLR*KS*-E*NFCL 65
+ND CIF+ R +VII VY D N++ K + C ++ K + FCL
Sbjct: 547 KNDSICPCIFIKRLGSEFVIIAVYVDDLNIIGTRKELLEAVECLKREFEMKDLGKTKFCL 606
Query: 66 ALSIEYLKDEVFMYQRTYIAKVLKGFYMDKSCPLCTLLVLRSLNVNKDPFRP*EKNEELL 125
L IE L + + ++Q TY K+LK FYMD S PL T +V+RSL++N DPFRP E +EELL
Sbjct: 607 GLQIENLSNGILVHQSTYTEKILKRFYMDNSHPLSTPMVVRSLDINTDPFRPQENDEELL 666
Query: 126 DPEVPYLSAIKALLYLASHTRLDISFA 152
E PYLSAI AL+YL ++TR DI FA
Sbjct: 667 GDETPYLSAIGALMYLVNNTRPDICFA 693
>UniRef100_Q9FWZ7 F11O6.4 protein [Arabidopsis thaliana]
Length = 484
Score = 114 bits (286), Expect = 3e-24
Identities = 58/103 (56%), Positives = 74/103 (71%)
Query: 63 FCLALSIEYLKDEVFMYQRTYIAKVLKGFYMDKSCPLCTLLVLRSLNVNKDPFRP*EKNE 122
FCL L IE+ +D +F++Q Y K+LK F MDK+ PL T +V RSLNV DPFRP E NE
Sbjct: 288 FCLGLQIEHFQDGIFVHQSNYTKKILKRFNMDKANPLSTPMVNRSLNVENDPFRPCEDNE 347
Query: 123 ELLDPEVPYLSAIKALLYLASHTRLDISFAINLLARYSSSPTQ 165
+ L P+VPY+SAI L+YLA+ TR DI+FA NLLAR ++ Q
Sbjct: 348 DFLGPKVPYMSAIGGLMYLANCTRPDIAFATNLLARSMTNHIQ 390
>UniRef100_Q7XP95 OSJNBa0021F22.5 protein [Oryza sativa]
Length = 911
Score = 101 bits (252), Expect = 3e-20
Identities = 51/94 (54%), Positives = 69/94 (73%)
Query: 63 FCLALSIEYLKDEVFMYQRTYIAKVLKGFYMDKSCPLCTLLVLRSLNVNKDPFRP*EKNE 122
FCL+L +E+L + ++Q Y K+L+ F MDKS P T +V+RSL+V KD FRP E E
Sbjct: 779 FCLSLQLEHLPFGILVHQNAYTQKILEKFNMDKSYPSKTPMVVRSLDVEKDLFRPKEDGE 838
Query: 123 ELLDPEVPYLSAIKALLYLASHTRLDISFAINLL 156
++L P+ PYLSAI AL+YLA+ TR DISF++NLL
Sbjct: 839 DVLGPDFPYLSAIGALMYLANSTRPDISFSVNLL 872
>UniRef100_Q7PUH9 ENSANGP00000020845 [Anopheles gambiae str. PEST]
Length = 863
Score = 95.1 bits (235), Expect = 3e-18
Identities = 53/141 (37%), Positives = 79/141 (55%), Gaps = 3/141 (2%)
Query: 64 CLALSIEYLKDEVFMYQRTYIAKVLKGFYMDKSCPLCTLLVLRSLNVNKDPFRP*EKNEE 123
CL + I+ K+ + + Q YI +LK F MDK P+ + S + K+ P NE
Sbjct: 583 CLGIRIQRTKETIKLDQEIYIESILKRFNMDKCKPVAVPMN-NSEKLTKEE-SPKSNNET 640
Query: 124 LLDPEVPYLSAIKALLYLASHTRLDISFAINLLARYSSSPTQRHWNG-KQVFRYLKGALD 182
+VPY A+ L+YLA TR DI +A+N+L+R++ +P Q+HWNG K V RYL+G +
Sbjct: 641 AAMKDVPYQEAVGCLMYLAQSTRPDILYAVNMLSRFNKNPGQKHWNGVKHVMRYLRGTSN 700
Query: 183 MSLFFPFMSKLNLIGYADAGY 203
L + +IGY DA +
Sbjct: 701 FKLVYKKNVDSKIIGYCDADW 721
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.357 0.160 0.555
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 496,606,915
Number of Sequences: 2790947
Number of extensions: 18152021
Number of successful extensions: 76416
Number of sequences better than 10.0: 547
Number of HSP's better than 10.0 without gapping: 241
Number of HSP's successfully gapped in prelim test: 306
Number of HSP's that attempted gapping in prelim test: 75611
Number of HSP's gapped (non-prelim): 654
length of query: 353
length of database: 848,049,833
effective HSP length: 128
effective length of query: 225
effective length of database: 490,808,617
effective search space: 110431938825
effective search space used: 110431938825
T: 11
A: 40
X1: 14 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 37 (21.7 bits)
S2: 75 (33.5 bits)
Lotus: description of TM0091b.10