BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0067b.6
(404 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q949K8 Gag polyprotein [Cicer arietinum] 243 7e-63
UniRef100_Q949L5 Gag polyprotein [Cicer arietinum] 180 7e-44
UniRef100_Q84KB1 Gag-protease polyprotein [Cucumis melo] 129 1e-28
UniRef100_Q949L4 Putative polyprotein [Cicer arietinum] 124 6e-27
UniRef100_Q949L3 Putative polyprotein [Cicer arietinum] 124 6e-27
UniRef100_Q8RU68 Putative 22 kDa kafirin cluster; Ty3-Gypsy type... 122 2e-26
UniRef100_Q7XL40 OSJNBa0056L23.17 protein [Oryza sativa] 119 1e-25
UniRef100_Q7XS94 OSJNBa0074B10.6 protein [Oryza sativa] 117 8e-25
UniRef100_Q8S823 Putative retroelement [Oryza sativa] 117 8e-25
UniRef100_Q7F9M6 OSJNBa0017P10.9 protein [Oryza sativa] 116 1e-24
UniRef100_Q60DH6 Putative polyprotein [Oryza sativa] 115 2e-24
UniRef100_Q7XVP5 OSJNBa0023J03.1 protein [Oryza sativa] 115 3e-24
UniRef100_Q65WS7 Putative polyprotein [Oryza sativa] 114 4e-24
UniRef100_Q7Y0A9 Putative polyprotein [Oryza sativa] 114 4e-24
UniRef100_Q8S692 Putative polyprotein [Oryza sativa] 114 4e-24
UniRef100_Q8LLZ0 Putative retroelement [Oryza sativa] 114 4e-24
UniRef100_Q7XWL9 OSJNBb0052B05.10 protein [Oryza sativa] 114 5e-24
UniRef100_Q7XQZ1 OSJNBb0045P24.14 protein [Oryza sativa] 114 5e-24
UniRef100_Q7XGE3 Putative retroelement [Oryza sativa] 114 5e-24
UniRef100_Q7XUA3 OSJNBa0019D11.8 protein [Oryza sativa] 114 6e-24
>UniRef100_Q949K8 Gag polyprotein [Cicer arietinum]
Length = 277
Score = 243 bits (620), Expect = 7e-63
Identities = 132/276 (47%), Positives = 173/276 (61%), Gaps = 23/276 (8%)
Query: 5 NQLAEMMATMAQAVTAQAQAVTAQANDNAMRRATEEAREQHQRQREITLDQNKGLNDFRR 64
+Q+AE M MA +V AQ A T R+ +R REI +++GL DFRR
Sbjct: 16 DQMAEAMNNMAASVAAQTAAKTQ--------------RDLEKRGREIRAAESRGLVDFRR 61
Query: 65 QNPPKFSGGTDPDKADLWIQEVEKIFGVLQTAEGAKVRMATYLLLGDAEYWWKGTRGIME 124
NPPKF G +KAD WIQEVEKIF ++ G KV ATY+LLGDAEYWW+ R +M
Sbjct: 62 YNPPKFKGDEGSEKADQWIQEVEKIFDMINCQAGVKVSYATYMLLGDAEYWWRSARLLMG 121
Query: 125 DNHEEISWNSFRTAFLEKYFPTSARDERESQFLTLRQGGMSVPEFASKLESLAKHFQFFH 184
HEE++W SF+ FL+KYFP S R + FL L QG ++V E+A+K ESL++HF+FF
Sbjct: 122 AAHEEVNWESFKRKFLDKYFPMSTRTKLGDDFLKLHQGSLTVGEYAAKFESLSRHFRFFR 181
Query: 185 DHVNERYMCKRFVNGLRPDIEDSVRPLRIMRFQSLVEKATEVELMKNRRLNRAG---TGG 241
+ ++E +MC RF +GL+ +I+DSV PL I RFQ+LVEK EVE MKN+R +R G +GG
Sbjct: 182 EEIDEPFMCHRFQDGLKYEIQDSVLPLGIQRFQALVEKCREVEDMKNKRASRVGNFNSGG 241
Query: 242 PMRSGSQNFQSREKFQSRGPYQRPAGTGFTSGSYRP 277
P R+ +Q+R K Q PY RP G RP
Sbjct: 242 PSRA---TYQNRGK-QVAKPYNRPQNN--NGGPSRP 271
>UniRef100_Q949L5 Gag polyprotein [Cicer arietinum]
Length = 209
Score = 180 bits (456), Expect = 7e-44
Identities = 94/207 (45%), Positives = 127/207 (60%), Gaps = 14/207 (6%)
Query: 5 NQLAEMMATMAQAVTAQAQAVTAQANDNAMRRATEEAREQHQRQREITLDQNKGLNDFRR 64
+Q+AE M MA +V AQ A T R+ +R REI +++GL DFRR
Sbjct: 17 DQMAEAMNNMAASVAAQTAAKTQ--------------RDLEKRGREIRAAESRGLEDFRR 62
Query: 65 QNPPKFSGGTDPDKADLWIQEVEKIFGVLQTAEGAKVRMATYLLLGDAEYWWKGTRGIME 124
NPPKF G +KAD WIQEVEKI +++ G V ATY+LLGDAEYW + R +M
Sbjct: 63 YNPPKFKGDESSEKADQWIQEVEKIIDMIKCQAGVTVSYATYMLLGDAEYWRRSGRLLMG 122
Query: 125 DNHEEISWNSFRTAFLEKYFPTSARDERESQFLTLRQGGMSVPEFASKLESLAKHFQFFH 184
HEE++W SF+ FL+KYFP S R + FL L QG M+V E+A+K SL++HF+F
Sbjct: 123 AAHEEVNWESFKRKFLDKYFPMSTRTKLGDDFLKLHQGSMTVGEYAAKFGSLSRHFRFVR 182
Query: 185 DHVNERYMCKRFVNGLRPDIEDSVRPL 211
+ +E +M F +GL+ +I+DSV PL
Sbjct: 183 EETDEPFMIHCFQDGLKYEIQDSVLPL 209
>UniRef100_Q84KB1 Gag-protease polyprotein [Cucumis melo]
Length = 429
Score = 129 bits (325), Expect = 1e-28
Identities = 94/329 (28%), Positives = 146/329 (43%), Gaps = 24/329 (7%)
Query: 57 KGLNDFRRQNPPKFSGGT-DPDKADLWIQEVEKIFGVLQTAEGAKVRMATYLLLGDAEYW 115
K L DFR+ NP F G DP +A +W+ +E IF ++ E KV+ A ++L W
Sbjct: 58 KHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAW 117
Query: 116 WKGTRGIMEDNHEEISWNSFRTAFLEKYFPTSARDERESQFLTLRQGGMSVPEFASKLES 175
W+ T ++ + +I+W F+ +F K+F S RD + +FL L QG M+V ++ ++ +
Sbjct: 118 WETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDM 177
Query: 176 LAKHFQFFHDHV-NERYMCKRFVNGLRPDIEDSVRPLRIMRFQSLVEKATEVELMKNRRL 234
L++ F + + E +FV GLR DI+ VR R + A ++ L + R
Sbjct: 178 LSR---FAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQE--RA 232
Query: 235 NRAGTGGPMRSGSQNFQSREKFQSRGPYQ----RPAGTGFTSGSYRPMTGAAGGSGDQTL 290
N + T G GS + Q R+ Q P RP G F S +P G
Sbjct: 233 NSSKTAG---RGSTSGQKRKAEQQPVPVPQRNFRPGGE-FRSFQQKPFEAGEAARG---- 284
Query: 291 KKETTCFRCGEPGHYANACPDTRPKCFNCNRMGHTAGQCRAPKTEPTVNTARGKRPAAKA 350
+ C CG+ H+ C CF C + GHTA +C T N G +A
Sbjct: 285 --KPLCTTCGK--HHLGRCLFGTRTCFKCRQEGHTADRCPLRVTGIAQNQGAGAPHQGRA 340
Query: 351 -RVYTMDGERAEEFARGERKNDGNFLTIL 378
+ E+A G G++ +L
Sbjct: 341 FATNRTEAEKAGTVVTGTLPVLGHYALVL 369
>UniRef100_Q949L4 Putative polyprotein [Cicer arietinum]
Length = 318
Score = 124 bits (310), Expect = 6e-27
Identities = 78/192 (40%), Positives = 97/192 (49%), Gaps = 16/192 (8%)
Query: 215 RFQSLVEKATEVELMKNRRLNRAG---TGGPMRSGSQNFQSREKFQSRGPYQRPAGTGFT 271
RFQ+LVEK EVE MKN+R +R G +GGP R+ N+Q++ K Q PY RP
Sbjct: 1 RFQALVEKCREVEDMKNKRASRVGNFNSGGPSRA---NYQNKGK-QVAKPYNRPQNNN-- 54
Query: 272 SGSYRPMTGAAGGSGDQTLKKETTCFRCGEPGHYANACPDTRPKCFNCNRMGHTAGQCRA 331
G RP G Q L+ CFRCG GHYA+AC P C NC + H C A
Sbjct: 55 GGQSRPGNQNFGRQLGQVLR----CFRCGGEGHYASACTANVPTCHNCRKSEHMERDCTA 110
Query: 332 PKTEPTVNTARGKRPAAKARVYTMDGERAE---EFARGERKNDGNFLTILSYSSITCSIT 388
PK EP VN AR RP A+ R+Y M+ E + + + GN LT L S T S
Sbjct: 111 PKVEPVVNVARATRPTARGRIYCMNAEEGNPSGNLIQRDCEIAGNTLTALFDSGATHSFI 170
Query: 389 LVACANTSNLLI 400
+ C N L +
Sbjct: 171 AMDCVNRLKLSV 182
>UniRef100_Q949L3 Putative polyprotein [Cicer arietinum]
Length = 318
Score = 124 bits (310), Expect = 6e-27
Identities = 77/192 (40%), Positives = 98/192 (50%), Gaps = 16/192 (8%)
Query: 215 RFQSLVEKATEVELMKNRRLNRAG---TGGPMRSGSQNFQSREKFQSRGPYQRPAGTGFT 271
RFQ+LVEK EVE MKN+R +R G +GGP R+ N+Q++ K Q PY RP
Sbjct: 1 RFQALVEKCREVEDMKNKRASRVGNFNSGGPSRA---NYQNKGK-QVAKPYNRPQNNN-- 54
Query: 272 SGSYRPMTGAAGGSGDQTLKKETTCFRCGEPGHYANACPDTRPKCFNCNRMGHTAGQCRA 331
G RP G Q L+ CFRCG GHYA+AC P C NC ++GH C A
Sbjct: 55 GGQSRPGNQNFGRQMGQVLR----CFRCGGEGHYASACTTNIPICHNCRKLGHMTRDCTA 110
Query: 332 PKTEPTVNTARGKRPAAKARVYTMDGERAE---EFARGERKNDGNFLTILSYSSITCSIT 388
PK E VN AR RP A+ R+Y ++ E + + + GN LT L S T S
Sbjct: 111 PKVELVVNVARATRPTARGRIYCVNAEEGNPSGNLIQRDCEIAGNTLTALFDSGATHSFI 170
Query: 389 LVACANTSNLLI 400
+ C N L +
Sbjct: 171 AMGCVNRLKLSV 182
>UniRef100_Q8RU68 Putative 22 kDa kafirin cluster; Ty3-Gypsy type [Oryza sativa]
Length = 1230
Score = 122 bits (305), Expect = 2e-26
Identities = 89/304 (29%), Positives = 137/304 (44%), Gaps = 31/304 (10%)
Query: 32 NAMRRATEEAREQHQRQREIT-----LDQNK-GLNDFRRQNPPKFSGGTDPDKADLWIQE 85
N + + +E QRQ EI D N+ GL +F++ PP FSG +P +A+ WI
Sbjct: 38 NLLANILGKQQETQQRQMEILERITKSDANRNGLGEFQKLKPPTFSGTANPLEAEEWIVA 97
Query: 86 VEKIFGVLQTAEGAKVRMATYLLLGDAEYWWKGTRGIMEDNHEEISWNSFRTAFLEKYFP 145
+EK F + + K+ ATY+L A WW + + I+W F+ AF +KYFP
Sbjct: 98 MEKSFEAMGCTDKEKIIYATYMLQSSAFEWWDAHKKSYSE-RIFITWELFKEAFYKKYFP 156
Query: 146 TSARDERESQFLTLRQGGMSVPEFASKLESLAKHFQFFHDHVNERYMCKRFVNGLRPDIE 205
S + +E +FL L+QG SV E+ + LA+ F + +RF +GLR ++
Sbjct: 157 ESVKRMKEKEFLELKQGNKSVAEYEIEFSRLARFAPEFVQ--TDGSKARRFESGLRQPLK 214
Query: 206 DSVRPLRIMRFQSLVEKATEVELMKNRRLNRAGTGGPMRSGSQNFQSREKFQSRGPYQRP 265
V + F+ +V KA +E K R G P ++KF++ P +
Sbjct: 215 RRVEAFELTIFREVVSKAQLLE--KGYHEQRIEHGQP----------QKKFKTNNPQNQG 262
Query: 266 AGTGFTSGSYRPMTGAAGGSGDQTLKKETTCFRCGEPGHYANACPDTRPKCFNCNRMGHT 325
G SG + + G +K C + H + CP+ +CF C GHT
Sbjct: 263 RFRGNYSGQMQRKSSENQG------RKCPIC----QGSHVPSICPNCWGRCFECGEAGHT 312
Query: 326 AGQC 329
QC
Sbjct: 313 RYQC 316
>UniRef100_Q7XL40 OSJNBa0056L23.17 protein [Oryza sativa]
Length = 963
Score = 119 bits (299), Expect = 1e-25
Identities = 110/416 (26%), Positives = 167/416 (39%), Gaps = 55/416 (13%)
Query: 13 TMAQAVTAQAQAVTAQANDNAMRRATEEAREQHQRQREITLDQNKGLNDFRRQNPPKFSG 72
T+AQ + Q Q + N + + + + +Q Q QNK L DF R +PP FS
Sbjct: 188 TLAQILAQQTQLI------NLLVQQAQNQQANNQNQNPPPPPQNK-LADFLRVSPPTFSS 240
Query: 73 GTDPDKADLWIQEVEKIFGVLQTAEGAKVRMATYLLLGDAEYWWKGTRGIMEDNHEEISW 132
T+P +A W+ VEK ++Q E KV A++ L G A WW R E I+W
Sbjct: 241 TTNPVEAGDWLHAVEKKLDLIQCTEQEKVSFASHQLHGPAAEWWDHFRQ-GRAGGEPITW 299
Query: 133 NSFRTAFLEKYFPTSARDERESQFLTLRQGGMSVPEFASKLESLAKHFQFFHDHVNERYM 192
F TAF + + PT ++ +F L QG SV E+ LA++ D +
Sbjct: 300 QEFTTAFKKTHIPTGVVALKKREFRALNQGSRSVTEYLHDFNRLARYAP--EDVRTDEER 357
Query: 193 CKRFVNGLRPDIEDSVRPLRIMRFQSLVEKATEVELMKNRRLNRAGTGGPMRSGSQNFQS 252
++F+ GL ++ ++ FQ LV+KA E NR + +S Q
Sbjct: 358 QEKFLEGLNDELSYALMSTDFRDFQQLVDKAIRQEDKYNRMEQKKRRAAQFKS-QQGSNQ 416
Query: 253 REKFQSRGPYQRPAGTGFTSGSYRPM-------TGAAGGSG-------------DQTLKK 292
R + + GP G +S RP TG G +Q ++K
Sbjct: 417 RPRLVT-GPQVPSYPQGGSSSVVRPQRQFYNNNTGNRGNDNRSVVARPAATPVQNQPVRK 475
Query: 293 E-----TTCFRCGEPGHYANACPDTRPKCFNCNRMGHTAGQCRAPKTEPTVNTARGKRPA 347
E CF CG+PGHYA+ CP + R K P N + P
Sbjct: 476 EQGSKPVICFNCGDPGHYADKCP-----------------KPRRVKNAPAPNNSSAPAPK 518
Query: 348 AKA-RVYTMDGERAEEFARGERKNDGNFLTILSYSSITCSITLVACANTSNLLILS 402
A+ V + + A + G + T+L S T S + A+ + ++S
Sbjct: 519 ARVNHVAAAEAQNAPDVVLGTFPVNSIPATVLFDSGATHSFLSKSFASNHGIEVIS 574
>UniRef100_Q7XS94 OSJNBa0074B10.6 protein [Oryza sativa]
Length = 1447
Score = 117 bits (292), Expect = 8e-25
Identities = 93/324 (28%), Positives = 136/324 (41%), Gaps = 33/324 (10%)
Query: 13 TMAQAVTAQAQAVTAQANDNAMRRATEEAREQHQRQREITLDQNKGLNDFRRQNPPKFSG 72
T+AQ + Q Q + N + + + + +Q Q QNK L DF R PP FS
Sbjct: 20 TLAQILAQQTQLI------NLLVQQAQNQQANNQNQNPPPPPQNK-LADFLRVRPPTFSS 72
Query: 73 GTDPDKADLWIQEVEKIFGVLQTAEGAKVRMATYLLLGDAEYWWKGTRGIMEDNHEEISW 132
T+P +A W+ VEK ++Q E KV A++ L G A WW R + E I+W
Sbjct: 73 TTNPVEAGDWLHAVEKKLDLIQCTEQEKVSFASHQLHGPAAEWWDHFRQGRAEG-EPITW 131
Query: 133 NSFRTAFLEKYFPTSARDERESQFLTLRQGGMSVPEFASKLESLAKHFQFFHDHVNERYM 192
F AF + + P ++ +F L QG SV E+ LA++ D +
Sbjct: 132 QEFTAAFKKTHIPAGVVALKKREFRALNQGSRSVTEYLHDFNRLARYAP--EDVRTDEER 189
Query: 193 CKRFVNGLRPDIEDSVRPLRIMRFQSLVEKATEVELMKNR---RLNRAG----------- 238
++F+ GL ++ ++ FQ LV+KA E NR ++ RA
Sbjct: 190 QEKFLEGLNDELSYALMSTDFWDFQQLVDKAIRQEDKYNRMEQKMRRAAQFKAQQGSNQR 249
Query: 239 ----TGGPMRSGSQNFQSREKFQSRGPYQRPAGTGFTSGSYRPMTGAAGGSGDQTLKKE- 293
TG S SQ S R Y G AA + +Q +++E
Sbjct: 250 PRLVTGPQAPSYSQGGSSSVIRPQRQFYNNNTGNRGNDNRNMVARPAATSAQNQPVRREQ 309
Query: 294 ----TTCFRCGEPGHYANACPDTR 313
CF CG+PGHYA+ CP R
Sbjct: 310 GSKPVVCFNCGDPGHYADKCPKPR 333
>UniRef100_Q8S823 Putative retroelement [Oryza sativa]
Length = 1425
Score = 117 bits (292), Expect = 8e-25
Identities = 96/319 (30%), Positives = 146/319 (45%), Gaps = 40/319 (12%)
Query: 7 LAEMMATMAQAVTAQAQAVTAQANDNAMRRATEEAREQHQRQREITLDQNKGLNDFRRQN 66
LA++MA Q + A Q + Q + +R + A +QHQ Q Q+K L +F
Sbjct: 43 LAQVMAHQTQMMAAMMQQMQQQ-HQQMHQRMLQHAEQQHQ-QFGPPPPQSK-LPEFLLVR 99
Query: 67 PPKFSGGTDPDKADLWIQEVEKIFGVLQTAEGAKVRMATYLLLGDAEYWWKGTRGIMEDN 126
PP FS T+P +A+ W+ +EK +LQ + KV AT+ L G A WW DN
Sbjct: 100 PPTFSSTTNPMEANDWLHAIEKKLNLLQCNDQEKVAFATHQLQGPASAWW--------DN 151
Query: 127 H-------EEISWNSFRTAFLEKYFPTSARDERESQFLTLRQGGMSVPEFASKLESLAKH 179
H E++W F +F + P +++ +F L QG +V E+ + LA++
Sbjct: 152 HMATRPPGTEVTWAEFCRSFKKAQVPDGVVAQKKREFRALHQGNRTVTEYLHEFNRLARY 211
Query: 180 FQFFHDHVNERYMCKRFVNGLRPDIEDSVRPLRIMRFQSLVEKATEVELMKNRRLNRAGT 239
D + ++F+ GL ++ + + F+ LV+KA E +N +++R
Sbjct: 212 AP--EDVRTDAEKQEKFLAGLDDELTNQLISGDYADFERLVDKAIRQEDQRN-KMDRKSN 268
Query: 240 GGPMRSGSQNFQSREKFQSRGPYQRPAGTGFTSGSYRPMTGAAGGSGDQTLKKET----- 294
SGSQN + +RG RP PM A G Q KKET
Sbjct: 269 FPQGASGSQNHHGGQ--PNRGAAPRP-----------PMAPAQSGPSAQA-KKETGAKPG 314
Query: 295 TCFRCGEPGHYANACPDTR 313
+CF CGE GH+A+ CP R
Sbjct: 315 SCFNCGELGHFADKCPKPR 333
>UniRef100_Q7F9M6 OSJNBa0017P10.9 protein [Oryza sativa]
Length = 1752
Score = 116 bits (290), Expect = 1e-24
Identities = 94/332 (28%), Positives = 143/332 (42%), Gaps = 37/332 (11%)
Query: 3 NTNQLAEMMATMAQAVTAQAQAVTAQANDNAMRRATEEAREQHQRQREITLDQNKGLNDF 62
N N +E T+AQ + QAQ M ++ + Q + QNK L +F
Sbjct: 294 NNNNNSEGNPTLAQVLAQQAQL---------MNMMMQQLQNQQNQGNNHAPPQNK-LAEF 343
Query: 63 RRQNPPKFSGGTDPDKADLWIQEVEKIFGVLQTAEGAKVRMATYLLLGDAEYWWKGTRGI 122
R PP FS T+P +A W+ +EK +LQ + KV A++ L G A WW R +
Sbjct: 344 LRVRPPIFSSTTNPVEAGDWLHTIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDHFR-L 402
Query: 123 MEDNHEEISWNSFRTAFLEKYFPTSARDERESQFLTLRQGGMSVPEFASKLESLAKHFQF 182
E I+W F AF + + P+ ++ +F +L QG SV E+ + LA++
Sbjct: 403 NRTTAEPITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARYAP- 461
Query: 183 FHDHVNERYMCKRFVNGLRPDIEDSVRPLRIMRFQSLVEKATEVELMKNR--RLNRAGTG 240
D N+ ++F+ GL ++ + FQ LV+KA E NR + R
Sbjct: 462 -EDVRNDEERQEKFLEGLNDELSYPLMTGDYHDFQKLVDKAIRQEDKYNRMEQKKRRIAQ 520
Query: 241 GPMRSGS--------------QNFQSREKFQSRGPYQRPAGTGFTSGSYRPMTGAAGGSG 286
+R G+ Q S R + AG + + RP+ A +
Sbjct: 521 FKVRQGNNQRPRLTLGPQPMPQGGSSSVVHPQRQFFNNNAGNNIRNQAPRPV---AAPTQ 577
Query: 287 DQTLKKE-----TTCFRCGEPGHYANACPDTR 313
Q +K+E CF CG+PGHYA+ CP R
Sbjct: 578 QQPVKREQGSKPVVCFNCGDPGHYADKCPKPR 609
>UniRef100_Q60DH6 Putative polyprotein [Oryza sativa]
Length = 2408
Score = 115 bits (288), Expect = 2e-24
Identities = 94/326 (28%), Positives = 139/326 (41%), Gaps = 37/326 (11%)
Query: 13 TMAQAVTAQAQAVTAQANDNAMRRATEEAREQHQRQREITLDQNKGLNDFRRQNPPKFSG 72
T+AQ + Q Q + N + + + + +Q Q QNK L DF R PP FS
Sbjct: 24 TLAQILAQQTQLI------NLLVQQAQNQQGNNQNQNPPPPPQNK-LADFLRVRPPTFSS 76
Query: 73 GTDPDKADLWIQEVEKIFGVLQTAEGAKVRMATYLLLGDAEYWWKGTRGIMEDNHEEISW 132
T+P +A W+ VEK ++Q E KV A++ L G A WW R + E I+W
Sbjct: 77 TTNPVEAGDWLHAVEKKLDLIQCTEQEKVSFASHQLHGPAAEWWDHFRQGRAEG-EPITW 135
Query: 133 NSFRTAFLEKYFPTSARDERESQFLTLRQGGMSVPEFASKLESLAKHFQFFHDHVNERYM 192
F AF + + PT ++ +F L QG SV E+ LA + D +
Sbjct: 136 QEFTAAFKKTHIPTGVVALKKREFRALNQGSRSVTEYLHDFNRLAHYAP--EDVRTDEER 193
Query: 193 CKRFVNGLRPDIEDSVRPLRIMRFQSLVEKATEVELMKNRRLNRAGTGGPMRSGSQNFQS 252
++F+ GL ++ ++ FQ LV+KA E NR + ++ Q
Sbjct: 194 QEKFLEGLNDELSYALMSTDFRDFQQLVDKAIRQEDKYNRMEQKKRRAAQFKA-QQGSNQ 252
Query: 253 REKFQSRGPYQRPAGTGFTSGSYRPM-------TG-------------AAGGSGDQTLKK 292
R + + GP G +S RP TG AA + +Q ++K
Sbjct: 253 RPRLIT-GPQDPSYPQGGSSSVVRPQRQFYNNNTGNRGNDNRNMVARPAATPAQNQPVRK 311
Query: 293 ET-----TCFRCGEPGHYANACPDTR 313
E CF CG+PGHYA+ CP R
Sbjct: 312 EQGSKPGVCFNCGDPGHYADKCPKPR 337
Score = 33.9 bits (76), Expect = 8.4
Identities = 18/62 (29%), Positives = 24/62 (38%), Gaps = 16/62 (25%)
Query: 285 SGDQTLKKETTCFRCGEPGHYANA----------------CPDTRPKCFNCNRMGHTAGQ 328
S D+ + C RCGE GH A++ CP +R CF C H
Sbjct: 2173 SDDEDEMERKACSRCGEIGHVASSCATICVHCEEDHPPDRCPTSRITCFFCEGTDHVPKD 2232
Query: 329 CR 330
C+
Sbjct: 2233 CQ 2234
>UniRef100_Q7XVP5 OSJNBa0023J03.1 protein [Oryza sativa]
Length = 1827
Score = 115 bits (287), Expect = 3e-24
Identities = 102/345 (29%), Positives = 154/345 (44%), Gaps = 53/345 (15%)
Query: 7 LAEMMATMAQAVTAQAQAVTAQANDNAMRRATEEAREQHQRQREITLDQNKGLNDFRRQN 66
LA++MA Q + A Q + Q + +R + A +QHQ Q Q+K L +F R
Sbjct: 349 LAQVMAHQTQMMAAMMQQMQQQ-HQQMHQRMMQHAEQQHQ-QFGPPPPQSK-LPEFLRVR 405
Query: 67 PPKFSGGTDPDKADLWIQEVEKIFGVLQTAEGAKVRMATYLLLGDAEYWWKGTRGIMEDN 126
PP FS T+P +A+ W+ +EK +LQ + KV AT+ L G A WW DN
Sbjct: 406 PPTFSSTTNPMEANDWLHAIEKKLNLLQCNDQEKVAFATHQLQGPASAWW--------DN 457
Query: 127 H-------EEISWNSFRTAFLEKYFPTSARDERESQFLTLRQGGMSVPEFASKLESLAKH 179
H E++W F +F + P +++ +F L QG M+V E+ + LA++
Sbjct: 458 HMATRPPGTEVTWAEFCRSFRKAQVPDGVVAQKKREFRALHQGNMTVTEYLHEFNRLARY 517
Query: 180 FQFFHDHVNERYMCKRFVNGLRPDIEDSVRPLRIMRFQSLVEKATEVELMKNRRLNRAGT 239
D + ++F+ GL ++ + + F+ LV+KA E +N +++R
Sbjct: 518 AP--EDVRTDAEKQEKFMAGLDDELTNQLISGDYADFERLVDKAIRQEDQRN-KMDRKRK 574
Query: 240 GGPMRSGSQNFQSREKF---QSRGP------YQRPAGTG----FTSGSY----------- 275
RS +Q Q R +F Q GP RP + TSGS
Sbjct: 575 AAQFRS-NQGSQHRPRFTPGQQGGPTTMIVRQHRPFNSSNFHQGTSGSQNHQGGQPNRGA 633
Query: 276 --RPMTGAAGGSGDQTLKKET-----TCFRCGEPGHYANACPDTR 313
RP A + KKET +CF CGE GH+A+ CP R
Sbjct: 634 APRPPMAPAQSAQPAQAKKETGAKPGSCFNCGELGHFADKCPKPR 678
>UniRef100_Q65WS7 Putative polyprotein [Oryza sativa]
Length = 1717
Score = 114 bits (286), Expect = 4e-24
Identities = 91/326 (27%), Positives = 138/326 (41%), Gaps = 37/326 (11%)
Query: 13 TMAQAVTAQAQAVTAQANDNAMRRATEEAREQHQRQREITLDQNKGLNDFRRQNPPKFSG 72
T+AQ + Q Q + N + + + + +Q Q QNK L DF R PP FS
Sbjct: 284 TLAQILAQQTQLI------NLLVQQAQNQQANNQNQNPPPPPQNK-LADFLRVRPPTFSS 336
Query: 73 GTDPDKADLWIQEVEKIFGVLQTAEGAKVRMATYLLLGDAEYWWKGTRGIMEDNHEEISW 132
T+P +A W+ VEK ++Q E KV A++ L G A WW R + E I+W
Sbjct: 337 TTNPVEAGDWLHAVEKKLDLIQCTEQEKVSFASHQLHGPAAEWWDHFRQGRAEG-EPITW 395
Query: 133 NSFRTAFLEKYFPTSARDERESQFLTLRQGGMSVPEFASKLESLAKHFQFFHDHVNERYM 192
F AF + + P+ ++ +F L QG SV E+ LA++ D +
Sbjct: 396 QEFTAAFRKTHIPSGVVALKKREFRALNQGSRSVTEYLHDFNRLARYAP--EDVRTDEER 453
Query: 193 CKRFVNGLRPDIEDSVRPLRIMRFQSLVEKATEVELMKNRRLNRAGTGGPMRSGSQNFQS 252
++F+ GL ++ ++ FQ LV+KA E NR + ++ Q
Sbjct: 454 QEKFLEGLNDELSYALMSTDFRDFQQLVDKAIRQEDKYNRMEQKKRRAAQFKA-QQGSNQ 512
Query: 253 REKFQSRGPYQRPAGTGFTSGSYRPM--------------------TGAAGGSGDQTLKK 292
R + + GP G +S RP AA + +Q ++K
Sbjct: 513 RPRLVT-GPQVPSYPQGGSSSVVRPQRQFYNNNTSNRGNDNRNVVARPAATSAQNQPVRK 571
Query: 293 E-----TTCFRCGEPGHYANACPDTR 313
E CF CG+PGHYA+ CP R
Sbjct: 572 EQGSKPVICFNCGDPGHYADKCPKPR 597
>UniRef100_Q7Y0A9 Putative polyprotein [Oryza sativa]
Length = 1564
Score = 114 bits (286), Expect = 4e-24
Identities = 85/306 (27%), Positives = 133/306 (42%), Gaps = 26/306 (8%)
Query: 13 TMAQAVTAQAQAVTAQANDNAMRRATEEAREQHQRQREITLDQNKGLNDFRRQNPPKFSG 72
T+AQ + QAQ M ++ + Q + QNK L +F R PP FS
Sbjct: 187 TLAQVLAQQAQL---------MNMMMQQLQNQQNQGNNHAPPQNK-LAEFLRVRPPTFSS 236
Query: 73 GTDPDKADLWIQEVEKIFGVLQTAEGAKVRMATYLLLGDAEYWWKGTRGIMEDNHEEISW 132
T P + W+ +EK +LQ + KV A++ L G A WW R + E I+W
Sbjct: 237 TTSPVEPGDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDHFR-LNRTTVEPITW 295
Query: 133 NSFRTAFLEKYFPTSARDERESQFLTLRQGGMSVPEFASKLESLAKHFQFFHDHVNERYM 192
F AF + + P+ ++ +F +L QG SV E+ + LA++ D ++
Sbjct: 296 LEFTAAFRKMHIPSGVLSLKKKEFRSLTQGSRSVTEYLHEFNRLARYAP--EDVRTDKQR 353
Query: 193 CKRFVNGLRPDIEDSVRPLRIMRFQSLVEKATEVELMKNRRLNRAGTGGPMRSGSQNFQS 252
+RF+ GL ++ + FQ LV+KA E + L P S +
Sbjct: 354 QERFLEGLNDELSYPLMTGDYHDFQKLVDKAIRQEDNQRPHLTLGPQSLPQGGSSSVVRP 413
Query: 253 REKFQSRGPYQRPAGTGFTSGSYRPMTGAAGGSGDQTLKKET-----TCFRCGEPGHYAN 307
+ +F + AG + + RP+ A + Q K+E CF CG+PGHY++
Sbjct: 414 QRQF-----FNNNAGNNIRNQAPRPV---AAPTQQQPAKREQGSKPGVCFNCGDPGHYSD 465
Query: 308 ACPDTR 313
CP R
Sbjct: 466 KCPKPR 471
>UniRef100_Q8S692 Putative polyprotein [Oryza sativa]
Length = 1342
Score = 114 bits (286), Expect = 4e-24
Identities = 86/301 (28%), Positives = 131/301 (42%), Gaps = 25/301 (8%)
Query: 13 TMAQAVTAQAQAVTAQANDNAMRRATEEAREQHQRQREITLDQNKGLNDFRRQNPPKFSG 72
T+AQ + Q Q M ++ + Q + QNK L +F R PP FS
Sbjct: 26 TLAQVLAQQTQL---------MNMMMQQLQNQQNQGNNHAPPQNK-LAEFLRVRPPVFSS 75
Query: 73 GTDPDKADLWIQEVEKIFGVLQTAEGAKVRMATYLLLGDAEYWWKGTRGIMEDNHEEISW 132
T+P +A W+ +EK +LQ + KV A++ L G A WW R + E I+W
Sbjct: 76 TTNPVEAGDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDHFR-LNRTTAEPITW 134
Query: 133 NSFRTAFLEKYFPTSARDERESQFLTLRQGGMSVPEFASKLESLAKHFQFFHDHVNERYM 192
F AF + + P+ ++ +F +L QG SV E+ + LA++ D N+
Sbjct: 135 LEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARYAP--EDVRNDEER 192
Query: 193 CKRFVNGLRPDIEDSVRPLRIMRFQSLVEKATEVELMKNRRLNRAGTGGPMRSGSQNFQS 252
++F+ GL ++ + FQ LV+KA E NR + + +Q S
Sbjct: 193 QEKFLEGLNDELSYPLMTGDYHDFQKLVDKAIRQEDKYNRMEQKKRRIAHFK--AQQGSS 250
Query: 253 REKFQSRGPYQRPAGTGFTSGSYRPMTGAAGGSGDQTLKKETTCFRCGEPGHYANACPDT 312
++ + GP P G S +P G K CF CG+PGHYA+ CP
Sbjct: 251 QKPRLTLGPQSMPQG---ASTQQQPAKREQG-------SKPMVCFNCGDPGHYADKCPKP 300
Query: 313 R 313
R
Sbjct: 301 R 301
>UniRef100_Q8LLZ0 Putative retroelement [Oryza sativa]
Length = 1729
Score = 114 bits (286), Expect = 4e-24
Identities = 86/301 (28%), Positives = 131/301 (42%), Gaps = 25/301 (8%)
Query: 13 TMAQAVTAQAQAVTAQANDNAMRRATEEAREQHQRQREITLDQNKGLNDFRRQNPPKFSG 72
T+AQ + Q Q M ++ + Q + QNK L +F R PP FS
Sbjct: 413 TLAQVLAQQTQL---------MNMMMQQLQNQQNQGNNHAPPQNK-LAEFLRVRPPVFSS 462
Query: 73 GTDPDKADLWIQEVEKIFGVLQTAEGAKVRMATYLLLGDAEYWWKGTRGIMEDNHEEISW 132
T+P +A W+ +EK +LQ + KV A++ L G A WW R + E I+W
Sbjct: 463 TTNPVEAGDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDHFR-LNRTTAEPITW 521
Query: 133 NSFRTAFLEKYFPTSARDERESQFLTLRQGGMSVPEFASKLESLAKHFQFFHDHVNERYM 192
F AF + + P+ ++ +F +L QG SV E+ + LA++ D N+
Sbjct: 522 LEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARYAP--EDVRNDEER 579
Query: 193 CKRFVNGLRPDIEDSVRPLRIMRFQSLVEKATEVELMKNRRLNRAGTGGPMRSGSQNFQS 252
++F+ GL ++ + FQ LV+KA E NR + + +Q S
Sbjct: 580 QEKFLEGLNDELSYPLMTGDYHDFQKLVDKAIRQEDKYNRMEQKKRRIAHFK--AQQGSS 637
Query: 253 REKFQSRGPYQRPAGTGFTSGSYRPMTGAAGGSGDQTLKKETTCFRCGEPGHYANACPDT 312
++ + GP P G S +P G K CF CG+PGHYA+ CP
Sbjct: 638 QKPRLTLGPQSMPQG---ASTQQQPAKREQG-------SKPMVCFNCGDPGHYADKCPKP 687
Query: 313 R 313
R
Sbjct: 688 R 688
>UniRef100_Q7XWL9 OSJNBb0052B05.10 protein [Oryza sativa]
Length = 1963
Score = 114 bits (285), Expect = 5e-24
Identities = 94/329 (28%), Positives = 143/329 (42%), Gaps = 34/329 (10%)
Query: 6 QLAEMMATMAQAVTAQAQAVTAQANDNAMRRATEEAREQHQRQREITLDQNKGLNDFRRQ 65
QLA + + + VT A A+ + + + + +Q QNK L +F R
Sbjct: 622 QLAPKVRVVGKEVTP------ALADPPVVNQLQNQQNQLNQGNNNAPPPQNK-LAEFLRV 674
Query: 66 NPPKFSGGTDPDKADLWIQEVEKIFGVLQTAEGAKVRMATYLLLGDAEYWWKGTRGIMED 125
PP FS T+P +A W+ +EK +LQ + KV A++ L G A WW R +
Sbjct: 675 RPPIFSSTTNPVEAGDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDHFR-LNRT 733
Query: 126 NHEEISWNSFRTAFLEKYFPTSARDERESQFLTLRQGGMSVPEFASKLESLAKHFQFFHD 185
E I+W F AF + + P+ ++ +F +L QG SV E+ + LA++ D
Sbjct: 734 TAEPITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARYAP--ED 791
Query: 186 HVNERYMCKRFVNGLRPDIEDSVRPLRIMRFQSLVEKATEVE----LMKNRRLN----RA 237
N+ ++F+ GL ++ + FQ LV+KA E M+ ++L +A
Sbjct: 792 VRNDEERQEKFLEGLNDELSYPLMTGDYPDFQKLVDKAIRQEDKYNRMEQKKLRIAHFKA 851
Query: 238 GTGGPMR--------SGSQNFQSREKFQSRGPYQRPAGTGFTSGSYRPMTGAAGGSGDQT 289
G R S Q S R + AG + + RP+ A + Q
Sbjct: 852 QQGNSQRPRLTLGPQSMPQGGSSSVVRPQRQFFNNNAGNNIRNQAPRPV---AASTQQQP 908
Query: 290 LKKE-----TTCFRCGEPGHYANACPDTR 313
KKE CF CG+PGHYAN CP R
Sbjct: 909 AKKEQGSKPVVCFNCGDPGHYANKCPKPR 937
>UniRef100_Q7XQZ1 OSJNBb0045P24.14 protein [Oryza sativa]
Length = 1195
Score = 114 bits (285), Expect = 5e-24
Identities = 92/324 (28%), Positives = 134/324 (40%), Gaps = 33/324 (10%)
Query: 13 TMAQAVTAQAQAVTAQANDNAMRRATEEAREQHQRQREITLDQNKGLNDFRRQNPPKFSG 72
T+AQ + Q Q + N + + + + +Q Q QNK L DF R PP FS
Sbjct: 26 TLAQILAQQTQLI------NLLVQQAQNQQANNQNQNPPPPPQNK-LADFLRVRPPTFSS 78
Query: 73 GTDPDKADLWIQEVEKIFGVLQTAEGAKVRMATYLLLGDAEYWWKGTRGIMEDNHEEISW 132
T+P +A W+ VEK ++Q E KV A++ L G A WW R + E I+W
Sbjct: 79 TTNPVEAGDWLHAVEKKLDLIQCTEQEKVSFASHQLHGPAAEWWDHFRQGRAEG-EPITW 137
Query: 133 NSFRTAFLEKYFPTSARDERESQFLTLRQGGMSVPEFASKLESLAKHFQFFHDHVNERYM 192
F AF + + P ++ +F L QG SV E+ LA++ D ++
Sbjct: 138 QEFTAAFKKTHIPAGVVALKKREFRALNQGSRSVTEYLHDFNRLARYAP--EDVRSDEER 195
Query: 193 CKRFVNGLRPDIEDSVRPLRIMRFQSLVEKATEVELMKNR------------------RL 234
++F+ GL ++ ++ FQ LV+KA E NR +
Sbjct: 196 QEKFLEGLNDELSYALMSTDFRDFQQLVDKAIRQEDKYNRMEQKKRRAAQFKAQQGSNQR 255
Query: 235 NRAGTGGPMRSGSQNFQSREKFQSRGPYQRPAGTGFTSGSYRPMTGAAGGSGDQTLKKET 294
R TG S Q S R Y G + AA +Q ++KE
Sbjct: 256 PRLVTGPQAPSYPQGGSSSVVRSQRQFYNNNTGNRGNDNRNMVVRPAATPVQNQPVRKEQ 315
Query: 295 -----TCFRCGEPGHYANACPDTR 313
CF CG+PGHYA+ CP R
Sbjct: 316 GSKPGVCFNCGDPGHYADKCPKPR 339
>UniRef100_Q7XGE3 Putative retroelement [Oryza sativa]
Length = 1461
Score = 114 bits (285), Expect = 5e-24
Identities = 89/306 (29%), Positives = 131/306 (42%), Gaps = 17/306 (5%)
Query: 13 TMAQAVTAQAQAVTAQANDNAMRRATEEAREQHQRQREITLDQNKGLNDFRRQNPPKFSG 72
T+AQ + Q Q + N + + + + +Q Q QNK L DF R PP FS
Sbjct: 24 TLAQILAQQTQLI------NLLVQQAQNQQGNNQNQNPPPPPQNK-LADFLRVRPPTFSS 76
Query: 73 GTDPDKADLWIQEVEKIFGVLQTAEGAKVRMATYLLLGDAEYWWKGTRGIMEDNHEEISW 132
T+P +A W+ VEK ++Q E KV A++ L G A WW R E I+W
Sbjct: 77 TTNPVEAGDWLHAVEKKLDLIQCTEQEKVSFASHQLHGPAAEWWDHFRQ-GRAGGEPITW 135
Query: 133 NSFRTAFLEKYFPTSARDERESQFLTLRQGGMSVPEFASKLESLAKHFQFFHDHVNERYM 192
F AF + + P+ ++ +F L QG SV ++ LA + D +
Sbjct: 136 QEFTAAFKKTHIPSGVVALKKREFRALNQGSRSVTKYLHDFNRLACYAP--EDVCTDEER 193
Query: 193 CKRFVNGLRPDIEDSVRPLRIMRFQSLVEKATEVELMKNRRLNRAGTGGPMRSGSQNFQS 252
++F+ GL ++ ++ FQ LV+KA E N + R TG + S Q S
Sbjct: 194 QEKFLEGLNDELSYALMSTDFRDFQQLVDKAIRQE--DNNQRPRLVTGPQVPSYPQGGSS 251
Query: 253 REKFQSRGPYQRPAGTGFTSGSYRPMTGAAGGSGDQTLKKE-----TTCFRCGEPGHYAN 307
R Y G AA +Q +++E CF CG+PGHYA+
Sbjct: 252 SVVRPQRQFYNNNTGNRGNDNRNVVARPAATPVQNQPVRREQGSKPVICFNCGDPGHYAD 311
Query: 308 ACPDTR 313
CP R
Sbjct: 312 KCPKPR 317
>UniRef100_Q7XUA3 OSJNBa0019D11.8 protein [Oryza sativa]
Length = 1470
Score = 114 bits (284), Expect = 6e-24
Identities = 109/405 (26%), Positives = 167/405 (40%), Gaps = 36/405 (8%)
Query: 11 MATMAQAVTAQAQAVTAQANDNAMRRATEEAREQHQRQREITLDQ-NKG---LNDFRRQN 66
MA+ +A T+ + T N A AT Q Q + I +Q N+G +F R
Sbjct: 1 MASRRRATTSNDETQTPDLNTLAGIMAT-----QTQLLQAIASNQGNRGGSSFGEFMRTK 55
Query: 67 PPKFSGGTDPDKADLWIQEVEKIFGVLQTAEGAKVRMATYLLLGDAEYWWKGTRGIMEDN 126
PP F+ +P +A+ W++ +EK +++ E KV A L G A WW + ED
Sbjct: 56 PPTFATADEPMEAEDWLRIIEKKLTLVRVREADKVIFAVNQLEGPAGDWWDTYKEAREDG 115
Query: 127 HEEISWNSFRTAFLEKYFPTSARDERESQFLTLRQGGMSVPEFASKLESLAKHFQFFHDH 186
E +W F AF E + P + ++++F LRQG +V E+ +K LA++ D
Sbjct: 116 AGEPTWEEFTVAFRENFVPAAVMRMKKNEFRRLRQGNTTVQEYLNKFTQLARY--AIGDL 173
Query: 187 VNERYMCKRFVNGLRPDIEDSVRPLRIMRFQSLVEKATEVE----LMKNRRLNRAGTGGP 242
+E +F+ GL ++ + FQSL+ K +E +++ R R
Sbjct: 174 ADEEEKIDKFIEGLNDELRGPMIGQDHESFQSLINKVVRLENDQRTVEHNRKRRLAMSRL 233
Query: 243 MRSGSQNFQSREKFQSRGPYQRPAGTGFTSGSYRPM---------TGAAGGSGDQTLKKE 293
++ Q + + P S RP+ T AA G+ KK
Sbjct: 234 PQTVPQRLKGATPSGWKPPVMVTNRPAALSNFNRPVALQNRTPTPTLAAPGA-----KKN 288
Query: 294 TTCFRCGEPGHYANACPDTRPKCFNCNRMGHTAGQCRAPKTEPTVNTARGKRPAAKARVY 353
CF CGE GHYAN CP R R G A R T P V K P + R
Sbjct: 289 VDCFNCGEYGHYANNCPHPRKTPI---RTGANAMTVRG-TTTPAVGRGLFKTPQSN-RTT 343
Query: 354 TMDGERAEEFARGE--RKNDGNFLTILSYSSITCSITLVACANTS 396
T G R E +++ G + + S +S + + A+ S
Sbjct: 344 TGFGRGQVNHVRAEEAQEDQGVLMGMFSINSTPVKVLFDSGASHS 388
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.318 0.131 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 666,351,731
Number of Sequences: 2790947
Number of extensions: 28409275
Number of successful extensions: 92332
Number of sequences better than 10.0: 4203
Number of HSP's better than 10.0 without gapping: 2925
Number of HSP's successfully gapped in prelim test: 1283
Number of HSP's that attempted gapping in prelim test: 80039
Number of HSP's gapped (non-prelim): 9298
length of query: 404
length of database: 848,049,833
effective HSP length: 130
effective length of query: 274
effective length of database: 485,226,723
effective search space: 132952122102
effective search space used: 132952122102
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 76 (33.9 bits)
Lotus: description of TM0067b.6