BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0060.15
(372 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_UPI0000221D9F UPI0000221D9F UniRef100 entry 46 0.002
UniRef100_Q7RZX0 Predicted protein [Neurospora crassa] 45 0.003
UniRef100_UPI0000437EC0 UPI0000437EC0 UniRef100 entry 44 0.006
UniRef100_UPI0000437EBF UPI0000437EBF UniRef100 entry 44 0.006
UniRef100_UPI000024A130 UPI000024A130 UniRef100 entry 44 0.009
UniRef100_UPI00002485DD UPI00002485DD UniRef100 entry 44 0.009
UniRef100_UPI0000437EC1 UPI0000437EC1 UniRef100 entry 42 0.027
UniRef100_UPI0000431B1C UPI0000431B1C UniRef100 entry 42 0.027
UniRef100_UPI00003615D2 UPI00003615D2 UniRef100 entry 42 0.036
UniRef100_UPI000042DFD5 UPI000042DFD5 UniRef100 entry 42 0.036
UniRef100_Q8BTI8 Mus musculus embryo RCB-0545 OHTA cDNA, RIKEN f... 41 0.047
UniRef100_Q9GPS9 Hypothetical protein [Dictyostelium discoideum] 41 0.061
UniRef100_UPI0000437029 UPI0000437029 UniRef100 entry 40 0.080
UniRef100_O08847 RNA polymerase II largest subunit [Mus musculus] 40 0.080
UniRef100_Q9Z213 Hypothetical protein [Rattus norvegicus] 40 0.080
UniRef100_Q924W1 ALEX protein [Rattus norvegicus] 40 0.080
UniRef100_Q9VK09 CG6043-PA, isoform A [Drosophila melanogaster] 40 0.080
UniRef100_Q8IP76 CG6043-PD, isoform D [Drosophila melanogaster] 40 0.080
UniRef100_Q8IP74 CG6043-PC, isoform C [Drosophila melanogaster] 40 0.080
UniRef100_Q86PD9 RE65015p [Drosophila melanogaster] 40 0.080
>UniRef100_UPI0000221D9F UPI0000221D9F UniRef100 entry
Length = 401
Score = 45.8 bits (107), Expect = 0.002
Identities = 60/230 (26%), Positives = 94/230 (40%), Gaps = 57/230 (24%)
Query: 66 PPVDQAYTPAAEVRNPSQPQKSRIQPQQHKHCKSSPLENDGGFHNQPPPRTS-------- 117
PP Q Y P + + SQPQ + QPQ+ C SP G+ NQP P+
Sbjct: 134 PPCQQQYQPPSPCQQ-SQPQPPQPQPQRTGGCLPSP----RGYENQPQPQQQYPQPQQQR 188
Query: 118 ---SFSSFFPRSVSHPSSHNPTNKPLQQ------------RTLSLSLPQR---QALTNAC 159
++S P+ P + P +P +Q T+ PQ+ Q + C
Sbjct: 189 GGCTYSQPQPQPQPQPPCYQPQPEPPRQTGGCLPGPYYPPNTMPPPQPQQPYPQQRSGGC 248
Query: 160 PKMATQKRKQQTPTPKTHK-TTPT----GYPQNPIKTYPLR--------IYVQVAVAGLG 206
+ A Q ++ Q P+T++ PT G Q+P + P + V V AG
Sbjct: 249 RQRAPQPQQPQPQYPRTNEFRAPTVECHGNGQDPCNSQPQQEDPCVGKVNIVSVDAAGKV 308
Query: 207 AHCGVVCDTAAEAGSEDEKEDRW--------CDSGNRAFQVGEGL-IAGD 247
H + +T +AG D +R+ C+S N+A + +G+ AGD
Sbjct: 309 DH--YLYETKKQAG--DVIGERYMCHVAISDCNSANQASETAQGMHWAGD 354
>UniRef100_Q7RZX0 Predicted protein [Neurospora crassa]
Length = 919
Score = 45.1 bits (105), Expect = 0.003
Identities = 36/128 (28%), Positives = 52/128 (40%), Gaps = 8/128 (6%)
Query: 66 PPVDQAYTPAAEVRNPSQPQKSRIQPQQHKHCKSSPLENDGGFHNQPPPRTSSFSSFFPR 125
PP D TPA E PS + + +P+ H + P E Q P +T S P+
Sbjct: 155 PPTDPE-TPADEWSRPSWKEHNDAEPEPHVEPEPEP-EPKAKHRPQSPTQTRSHKR--PQ 210
Query: 126 SVSHPSSHNPTNKPLQQRTLSLSLPQRQALTNACPKMATQKRKQQTPTPKTHKTTPTGYP 185
S + SH P+Q R+ + S + + T A +Q R Q P P+ Y
Sbjct: 211 SPTQTRSHRRPQSPIQTRSHTKSQSKSHSKTQA----RSQPRPQPPPEPELRPEDDPDYE 266
Query: 186 QNPIKTYP 193
Q P+ P
Sbjct: 267 QEPVPEPP 274
>UniRef100_UPI0000437EC0 UPI0000437EC0 UniRef100 entry
Length = 2229
Score = 44.3 bits (103), Expect = 0.006
Identities = 42/132 (31%), Positives = 52/132 (38%), Gaps = 12/132 (9%)
Query: 66 PPVDQAYTPAAEVRNPSQPQKSRIQPQQHKHCKSSPLENDGGFHNQPPPRTSSFSSFFPR 125
P Q TP ++PS P+ S QP K SP P+T++ S P+
Sbjct: 236 PSTPQPTTPKPTTQSPSTPKPSTPQPTTPKPTTQSPSTPKPSTPQPTTPKTTTQSPSTPK 295
Query: 126 SVSHPSSHNPTN-KPLQQRTLSLSLPQRQALTNACPKMATQK---RKQQTPTPKTHKTTP 181
PS+ PT KP Q S S P+ PK TQ K TP P T K T
Sbjct: 296 ----PSTPQPTTPKPTTQ---SPSTPKPSTPQPTTPKTTTQSPSTPKPSTPQPTTPKPT- 347
Query: 182 TGYPQNPIKTYP 193
T P P + P
Sbjct: 348 TQSPSTPKPSTP 359
Score = 44.3 bits (103), Expect = 0.006
Identities = 42/132 (31%), Positives = 52/132 (38%), Gaps = 12/132 (9%)
Query: 66 PPVDQAYTPAAEVRNPSQPQKSRIQPQQHKHCKSSPLENDGGFHNQPPPRTSSFSSFFPR 125
P Q TP ++PS P+ S QP K SP P+T++ S P+
Sbjct: 276 PSTPQPTTPKTTTQSPSTPKPSTPQPTTPKPTTQSPSTPKPSTPQPTTPKTTTQSPSTPK 335
Query: 126 SVSHPSSHNPTN-KPLQQRTLSLSLPQRQALTNACPKMATQK---RKQQTPTPKTHKTTP 181
PS+ PT KP Q S S P+ PK TQ K TP P T K T
Sbjct: 336 ----PSTPQPTTPKPTTQ---SPSTPKPSTPQPTTPKPTTQSPSTPKPSTPQPTTPKPT- 387
Query: 182 TGYPQNPIKTYP 193
T P P + P
Sbjct: 388 TQSPSTPKPSTP 399
Score = 42.7 bits (99), Expect = 0.016
Identities = 40/131 (30%), Positives = 51/131 (38%), Gaps = 10/131 (7%)
Query: 66 PPVDQAYTPAAEVRNPSQPQKSRIQPQQHKHCKSSPLENDGGFHNQPPPRTSSFSSFFPR 125
P Q TP ++PS P+ S QP K SP P+ ++ S P+
Sbjct: 216 PSPPQPTTPKPTTQSPSTPKPSTPQPTTPKPTTQSPSTPKPSTPQPTTPKPTTQSPSTPK 275
Query: 126 SVSHPSSHNPTNKPLQQRTLSLSLPQRQALTNACPKMATQK---RKQQTPTPKTHKTTPT 182
PS+ PT + T S S P+ PK TQ K TP P T KTT T
Sbjct: 276 ----PSTPQPTTP--KTTTQSPSTPKPSTPQPTTPKPTTQSPSTPKPSTPQPTTPKTT-T 328
Query: 183 GYPQNPIKTYP 193
P P + P
Sbjct: 329 QSPSTPKPSTP 339
Score = 35.8 bits (81), Expect = 2.0
Identities = 36/126 (28%), Positives = 43/126 (33%), Gaps = 29/126 (23%)
Query: 66 PPVDQAYTPAAEVRNPSQPQKSRIQPQQHKHCKSSPLENDGGFHNQPPPRTSSFSSFFPR 125
P Q TP ++PS P+ S QP K SP + P P
Sbjct: 376 PSTPQPTTPKPTTQSPSTPKPSTPQPTTPKPTTQSP--------STPKP----------- 416
Query: 126 SVSHPSSHNPTNKPLQQRTLSLSLPQRQALTNACPKMATQK---RKQQTPTPKTHKTTPT 182
S P++ PT T S S P+ PK TQ K TP P T K TP
Sbjct: 417 STPQPTTPKPT-------TQSPSTPKPSTPQPTTPKPTTQSPSTPKPTTPKPTTPKPTPP 469
Query: 183 GYPQNP 188
P
Sbjct: 470 AVQNLP 475
>UniRef100_UPI0000437EBF UPI0000437EBF UniRef100 entry
Length = 1987
Score = 44.3 bits (103), Expect = 0.006
Identities = 42/132 (31%), Positives = 52/132 (38%), Gaps = 12/132 (9%)
Query: 66 PPVDQAYTPAAEVRNPSQPQKSRIQPQQHKHCKSSPLENDGGFHNQPPPRTSSFSSFFPR 125
P Q TP ++PS P+ S QP K SP P+T++ S P+
Sbjct: 23 PSTPQPTTPKPTTQSPSTPKPSTPQPTTPKPTTQSPSTPKPSTPQPTTPKTTTQSPSTPK 82
Query: 126 SVSHPSSHNPTN-KPLQQRTLSLSLPQRQALTNACPKMATQK---RKQQTPTPKTHKTTP 181
PS+ PT KP Q S S P+ PK TQ K TP P T K T
Sbjct: 83 ----PSTPQPTTPKPTTQ---SPSTPKPSTPQPTTPKTTTQSPSTPKPSTPQPTTPKPT- 134
Query: 182 TGYPQNPIKTYP 193
T P P + P
Sbjct: 135 TQSPSTPKPSTP 146
Score = 44.3 bits (103), Expect = 0.006
Identities = 42/132 (31%), Positives = 52/132 (38%), Gaps = 12/132 (9%)
Query: 66 PPVDQAYTPAAEVRNPSQPQKSRIQPQQHKHCKSSPLENDGGFHNQPPPRTSSFSSFFPR 125
P Q TP ++PS P+ S QP K SP P+T++ S P+
Sbjct: 63 PSTPQPTTPKTTTQSPSTPKPSTPQPTTPKPTTQSPSTPKPSTPQPTTPKTTTQSPSTPK 122
Query: 126 SVSHPSSHNPTN-KPLQQRTLSLSLPQRQALTNACPKMATQK---RKQQTPTPKTHKTTP 181
PS+ PT KP Q S S P+ PK TQ K TP P T K T
Sbjct: 123 ----PSTPQPTTPKPTTQ---SPSTPKPSTPQPTTPKPTTQSPSTPKPSTPQPTTPKPT- 174
Query: 182 TGYPQNPIKTYP 193
T P P + P
Sbjct: 175 TQSPSTPKPSTP 186
Score = 42.7 bits (99), Expect = 0.016
Identities = 40/131 (30%), Positives = 51/131 (38%), Gaps = 10/131 (7%)
Query: 66 PPVDQAYTPAAEVRNPSQPQKSRIQPQQHKHCKSSPLENDGGFHNQPPPRTSSFSSFFPR 125
P Q TP ++PS P+ S QP K SP P+ ++ S P+
Sbjct: 3 PSPPQPTTPKPTTQSPSTPKPSTPQPTTPKPTTQSPSTPKPSTPQPTTPKPTTQSPSTPK 62
Query: 126 SVSHPSSHNPTNKPLQQRTLSLSLPQRQALTNACPKMATQK---RKQQTPTPKTHKTTPT 182
PS+ PT + T S S P+ PK TQ K TP P T KTT T
Sbjct: 63 ----PSTPQPTTP--KTTTQSPSTPKPSTPQPTTPKPTTQSPSTPKPSTPQPTTPKTT-T 115
Query: 183 GYPQNPIKTYP 193
P P + P
Sbjct: 116 QSPSTPKPSTP 126
Score = 35.8 bits (81), Expect = 2.0
Identities = 32/119 (26%), Positives = 46/119 (37%), Gaps = 16/119 (13%)
Query: 66 PPVDQAYTPAAEVRNPSQPQKSRIQPQQHKHCKSSPLENDGGFHNQPPPRTSSFSSFFPR 125
P Q TP ++PS P+ S QP K SP + P P T ++ P
Sbjct: 163 PSTPQPTTPKPTTQSPSTPKPSTPQPTTPKPTTQSP--------STPKPSTPQPTTPKPT 214
Query: 126 SVSHPSSHNPTNKPLQQRTLSLSLPQRQALTNACPKMATQKRKQQTPTPKTHKTTPTGY 184
+ S PS+ P+ T + P+ + + PK T K PTP K P +
Sbjct: 215 TQS-PSTPKPS-------TPQPTTPKPTTQSPSTPKPTTPKPTTPKPTPPALKCPPNSH 265
>UniRef100_UPI000024A130 UPI000024A130 UniRef100 entry
Length = 1877
Score = 43.5 bits (101), Expect = 0.009
Identities = 40/131 (30%), Positives = 49/131 (36%), Gaps = 11/131 (8%)
Query: 66 PPVDQAYTPAAEVRNPSQPQKSRIQPQQHKHCKSSPLENDGGFHNQPPPRTSSFSSFFPR 125
P Q TP ++PS P+ S QP K SP P+ ++ S P+
Sbjct: 49 PSTPQPTTPKTTTQSPSTPKPSTPQPTTPKPTTQSPSTPKPSTPQPTTPKPTTQSPSTPK 108
Query: 126 SVSHPSSHNPTN-KPLQQRTLSLSLPQRQALTNACPKMATQKR---KQQTPTPKTHKTTP 181
PS+ PT KP Q S S P+ PK TQ K TP P T K TP
Sbjct: 109 ----PSTPQPTTPKPTTQ---SPSTPKPSTAQPTTPKPTTQSPSTPKPTTPKPTTPKPTP 161
Query: 182 TGYPQNPIKTY 192
P Y
Sbjct: 162 PALKCPPNSHY 172
Score = 43.5 bits (101), Expect = 0.009
Identities = 41/130 (31%), Positives = 51/130 (38%), Gaps = 11/130 (8%)
Query: 66 PPVDQAYTPAAEVRNPSQPQKSRIQPQQHKHCKSSPLENDGGFHNQPPPRTSSFSSFFPR 125
P Q TP ++PS P+ S QP K SP P+T++ S P+
Sbjct: 9 PSTPQPTTPKPTTQSPSTPKPSTPQPTTPKPTTQSPSTPKPSTPQPTTPKTTTQSPSTPK 68
Query: 126 SVSHPSSHNPTN-KPLQQRTLSLSLPQRQALTNACPKMATQKRKQQTPTPKT-HKTTPTG 183
PS+ PT KP Q S S P+ PK TQ TP P T TTP
Sbjct: 69 ----PSTPQPTTPKPTTQ---SPSTPKPSTPQPTTPKPTTQ--SPSTPKPSTPQPTTPKP 119
Query: 184 YPQNPIKTYP 193
Q+P P
Sbjct: 120 TTQSPSTPKP 129
>UniRef100_UPI00002485DD UPI00002485DD UniRef100 entry
Length = 2040
Score = 43.5 bits (101), Expect = 0.009
Identities = 41/130 (31%), Positives = 51/130 (38%), Gaps = 11/130 (8%)
Query: 66 PPVDQAYTPAAEVRNPSQPQKSRIQPQQHKHCKSSPLENDGGFHNQPPPRTSSFSSFFPR 125
P Q TP ++PS P+ S QP K SP P+T++ S P+
Sbjct: 189 PSTPQPTTPKPTTQSPSTPKPSTPQPTTPKPTTQSPSTPKPSTPQPTTPKTTTQSPSTPK 248
Query: 126 SVSHPSSHNPTN-KPLQQRTLSLSLPQRQALTNACPKMATQKRKQQTPTPKT-HKTTPTG 183
PS+ PT KP Q S S P+ PK TQ TP P T TTP
Sbjct: 249 ----PSTPQPTTPKPTTQ---SPSTPKPSTPQPTTPKPTTQ--SPSTPKPSTPQPTTPKP 299
Query: 184 YPQNPIKTYP 193
Q+P P
Sbjct: 300 TTQSPSTPKP 309
Score = 43.5 bits (101), Expect = 0.009
Identities = 40/131 (30%), Positives = 49/131 (36%), Gaps = 11/131 (8%)
Query: 66 PPVDQAYTPAAEVRNPSQPQKSRIQPQQHKHCKSSPLENDGGFHNQPPPRTSSFSSFFPR 125
P Q TP ++PS P+ S QP K SP P+ ++ S P+
Sbjct: 229 PSTPQPTTPKTTTQSPSTPKPSTPQPTTPKPTTQSPSTPKPSTPQPTTPKPTTQSPSTPK 288
Query: 126 SVSHPSSHNPTN-KPLQQRTLSLSLPQRQALTNACPKMATQKR---KQQTPTPKTHKTTP 181
PS+ PT KP Q S S P+ PK TQ K TP P T K TP
Sbjct: 289 ----PSTPQPTTPKPTTQ---SPSTPKPSTAQPTTPKPTTQSPSTPKPTTPKPTTPKPTP 341
Query: 182 TGYPQNPIKTY 192
P Y
Sbjct: 342 PALKCPPNSHY 352
Score = 40.4 bits (93), Expect = 0.080
Identities = 39/131 (29%), Positives = 50/131 (37%), Gaps = 10/131 (7%)
Query: 66 PPVDQAYTPAAEVRNPSQPQKSRIQPQQHKHCKSSPLENDGGFHNQPPPRTSSFSSFFPR 125
P Q TP ++PS P+ S QP K SP P+ ++ S P+
Sbjct: 169 PSPPQPTTPKPTTQSPSTPKPSTPQPTTPKPTTQSPSTPKPSTPQPTTPKPTTQSPSTPK 228
Query: 126 SVSHPSSHNPTNKPLQQRTLSLSLPQRQALTNACPKMATQK---RKQQTPTPKTHKTTPT 182
PS+ PT + T S S P+ PK TQ K TP P T K T T
Sbjct: 229 ----PSTPQPTTP--KTTTQSPSTPKPSTPQPTTPKPTTQSPSTPKPSTPQPTTPKPT-T 281
Query: 183 GYPQNPIKTYP 193
P P + P
Sbjct: 282 QSPSTPKPSTP 292
>UniRef100_UPI0000437EC1 UPI0000437EC1 UniRef100 entry
Length = 2028
Score = 42.0 bits (97), Expect = 0.027
Identities = 41/132 (31%), Positives = 51/132 (38%), Gaps = 12/132 (9%)
Query: 66 PPVDQAYTPAAEVRNPSQPQKSRIQPQQHKHCKSSPLENDGGFHNQPPPRTSSFSSFFPR 125
P Q TP ++PS P+ S QP K SP P+ ++ S P+
Sbjct: 176 PSTPQPTTPKTTTQSPSTPKPSTPQPTTPKPTTQSPSTPKPSTPQPTTPKPTTQSPSTPK 235
Query: 126 SVSHPSSHNPTN-KPLQQRTLSLSLPQRQALTNACPKMATQK---RKQQTPTPKTHKTTP 181
PS+ PT KP Q S S P+ PK TQ K TP P T K T
Sbjct: 236 ----PSTPQPTTPKPTTQ---SPSTPKPSTPQPTTPKPTTQSPSTPKPSTPQPTTPKPT- 287
Query: 182 TGYPQNPIKTYP 193
T P P + P
Sbjct: 288 TQSPSTPKPSTP 299
Score = 38.5 bits (88), Expect = 0.30
Identities = 31/123 (25%), Positives = 47/123 (38%), Gaps = 4/123 (3%)
Query: 66 PPVDQAYTPAAEVRNPSQPQKSRIQPQQHKHCKSSPLENDGGFHNQPPPRTSSFSSFFPR 125
P Q TP ++PS P+ S QP K SP P+ ++ S P+
Sbjct: 216 PSTPQPTTPKPTTQSPSTPKPSTPQPTTPKPTTQSPSTPKPSTPQPTTPKPTTQSPSTPK 275
Query: 126 -SVSHPSSHNPTNKPL---QQRTLSLSLPQRQALTNACPKMATQKRKQQTPTPKTHKTTP 181
S P++ PT + + T + P+ + + PK T K PTP K P
Sbjct: 276 PSTPQPTTPKPTTQSPSTPKPSTPQPTTPKPTTQSPSTPKPTTPKPTTPKPTPPALKCPP 335
Query: 182 TGY 184
+
Sbjct: 336 NSH 338
Score = 37.0 bits (84), Expect = 0.88
Identities = 38/124 (30%), Positives = 48/124 (38%), Gaps = 12/124 (9%)
Query: 74 PAAEVRNPSQPQKSRIQPQQHKHCKSSPLENDGGFHNQPPPRTSSFSSFFPRSVSHPSSH 133
P ++PS P+ S QP K SP P+ ++ S P+ PS+
Sbjct: 164 PKPTTQSPSTPKPSTPQPTTPKTTTQSPSTPKPSTPQPTTPKPTTQSPSTPK----PSTP 219
Query: 134 NPTN-KPLQQRTLSLSLPQRQALTNACPKMATQK---RKQQTPTPKTHKTTPTGYPQNPI 189
PT KP Q S S P+ PK TQ K TP P T K T T P P
Sbjct: 220 QPTTPKPTTQ---SPSTPKPSTPQPTTPKPTTQSPSTPKPSTPQPTTPKPT-TQSPSTPK 275
Query: 190 KTYP 193
+ P
Sbjct: 276 PSTP 279
>UniRef100_UPI0000431B1C UPI0000431B1C UniRef100 entry
Length = 324
Score = 42.0 bits (97), Expect = 0.027
Identities = 35/144 (24%), Positives = 59/144 (40%), Gaps = 23/144 (15%)
Query: 63 YFGPPVDQAYTPAAEVRNPSQPQK-SRIQPQQ---HKHCKSSPLENDGGFHNQPPPRTSS 118
Y P Q+ + + +P + Q S++ PQQ + + + SP ++QP P
Sbjct: 138 YSQPSPQQSTNYSHSIHSPQKSQNYSQMSPQQAPPNNYSQPSPSPQQSRNYSQPSPSPQQ 197
Query: 119 FSSFFPRSVSHPSSHN---PTNKPLQQRTLSLSLPQRQALTNACPKMATQKRKQQTP--- 172
++ S S SHN P P Q T S PQ++++ C A+Q +Q +
Sbjct: 198 SRNYSQPSPSSQQSHNYSQPAPSPQQTHTYSQPSPQQKSM---CASQASQSSQQPSSYSQ 254
Query: 173 ----------TPKTHKTTPTGYPQ 186
P++H + YPQ
Sbjct: 255 PSPQQSTNYSLPQSHSKSAEEYPQ 278
Score = 36.6 bits (83), Expect = 1.2
Identities = 34/120 (28%), Positives = 48/120 (39%), Gaps = 22/120 (18%)
Query: 81 PSQPQKSRIQPQQHKHCKSSPLENDGGFHNQPPPRTSSFSSFFPRSVSHPSSHNPTNKPL 140
PS +S QP + + +SSP QPP S S P + S PS P P
Sbjct: 5 PSNYSQSSPQPPSN-YTQSSP---------QPPSNYSQPSPQPPSNYSQPSPQPPPVYPQ 54
Query: 141 QQRTLSLSLPQR------------QALTNACPKMATQKRKQQTPTPKTHKTTPTGYPQNP 188
Q ++ + S P Q+LT + + Q R P+P+ +T P PQ P
Sbjct: 55 QSQSSNFSHPSSQTHSSNYAQSSPQSLTAGYSQPSPQPRNYSQPSPQQIQTFPQHSPQAP 114
Score = 35.4 bits (80), Expect = 2.6
Identities = 29/121 (23%), Positives = 51/121 (41%), Gaps = 12/121 (9%)
Query: 66 PPVDQAYTPAAEVRNPSQPQKSRIQPQQHKHCKSSPLENDGGFHNQPPPRTSSFSSFFPR 125
PPV + ++ +PS Q + +SSP G+ +QP P+ ++S P+
Sbjct: 49 PPVYPQQSQSSNFSHPSS------QTHSSNYAQSSPQSLTAGY-SQPSPQPRNYSQPSPQ 101
Query: 126 SVSHPSSHNPTNKPLQQRTLSLSLPQRQALTNACPKMATQKRKQQTPTPKTHKTTPTGYP 185
+ H+P P + S PQ + + + P+ A K Q +P T+ + P
Sbjct: 102 QIQTFPQHSPQAPP----SYSQPSPQNASYSQSSPQQAV-KYSQPSPQQSTNYSHSIHSP 156
Query: 186 Q 186
Q
Sbjct: 157 Q 157
>UniRef100_UPI00003615D2 UPI00003615D2 UniRef100 entry
Length = 1523
Score = 41.6 bits (96), Expect = 0.036
Identities = 25/77 (32%), Positives = 37/77 (47%), Gaps = 2/77 (2%)
Query: 119 FSSFFPRSVSHPSSHNPTNKPLQQRTLSLSLPQRQALTNACPKMATQKRKQQTPTP-KTH 177
FSS P S+ H SS+ P + +QR+ SL P+R ++ CP+ R Q P+P +
Sbjct: 983 FSSAAPHSIPHSSSYLPLPEASRQRSHSLP-PERPEVSQGCPRCTCSCRHAQDPSPIHSS 1041
Query: 178 KTTPTGYPQNPIKTYPL 194
T P+ PL
Sbjct: 1042 NQTQPAMQDRPLSHIPL 1058
>UniRef100_UPI000042DFD5 UPI000042DFD5 UniRef100 entry
Length = 606
Score = 41.6 bits (96), Expect = 0.036
Identities = 33/125 (26%), Positives = 53/125 (42%), Gaps = 26/125 (20%)
Query: 69 DQAYTPAAEVRNPSQPQKSRIQPQQHKHCKSSPL--ENDGGFHNQ------------PP- 113
D Y+P + S P +S Q QQ + SSPL +N +NQ PP
Sbjct: 371 DSEYSPQTQRSTSSLPSQSNSQQQQQQQQSSSPLSSQNQNNQYNQQNLQSTSTGRQLPPT 430
Query: 114 --------PRTSSFSSFFPRSVSHPSSHNPTNKPLQQRTLSLSLPQRQALTNACPKMATQ 165
P S+ S++ P S+S PS + PT ++R ++ + K+ +
Sbjct: 431 GPKKYQTSPPQSNSSNYSPSSLSQPSHYRPTEPRFERRIRDYQTDEQPSEEE---KLLIE 487
Query: 166 KRKQQ 170
+RK+Q
Sbjct: 488 RRKRQ 492
>UniRef100_Q8BTI8 Mus musculus embryo RCB-0545 OHTA cDNA, RIKEN full-length enriched
library, clone:G431002B22 product:RNA BINDING PROTEIN
homolog [Mus musculus]
Length = 2607
Score = 41.2 bits (95), Expect = 0.047
Identities = 46/196 (23%), Positives = 73/196 (36%), Gaps = 66/196 (33%)
Query: 56 PTRVGKFYFGPPVDQAYTPAAEVRNPS-------------------QPQKSRIQPQQHKH 96
PTR + PP ++ TP + R+ S Q + PQ+ H
Sbjct: 692 PTRRSRSGSSPPKQKSKTPPRQSRSNSPQPKVKSGTPPRPGSVTNMQADECTATPQRQSH 751
Query: 97 CKSSPLENDGGFHNQPPPRTSSFSS---------------------------FFPRSVSH 129
+SSP DG ++ P R S S PR SH
Sbjct: 752 SESSP---DGEVKSRTPSRQSCSGSSPRVKSSTPPRQSPSRSSSPQPKVKTVISPRGRSH 808
Query: 130 PSSHNPTNKPLQQRTLSLSLPQRQALT-NACPKMATQKR-----------KQQTPTPKTH 177
SS +P+ + RT PQR++ + + CPK+ ++ R K + TP H
Sbjct: 809 SSSSSPSPSRVTSRT-----PQRKSRSVSPCPKVDSRLRHSRSRSSSPDSKMELGTPLRH 863
Query: 178 KTTPTGYPQNPIKTYP 193
+ + YP++ ++T P
Sbjct: 864 SGSTSPYPKSMLQTPP 879
Score = 35.8 bits (81), Expect = 2.0
Identities = 32/136 (23%), Positives = 55/136 (39%), Gaps = 15/136 (11%)
Query: 73 TPAAEVRNPSQPQKSR--IQPQQHKHCKSSPLENDGGFHNQPPPRTSSFSSFF------- 123
TP A +PS P+++ + PQ+ + S +E P R+ S SS
Sbjct: 1352 TPRARSHSPSSPERNNKSVTPQRERSGSESSVEQKNLARTSPGQRSRSGSSQELDGKPSA 1411
Query: 124 -----PRSVSHPSSHNPTNKPLQQRTLSLSLPQRQALTNACPKMA-TQKRKQQTPTPKTH 177
S S P S T PL+QR+ S S P+ + + P+++ + + P+
Sbjct: 1412 SPQERSESDSSPDSKPKTRTPLRQRSHSGSSPEVDSKSRHSPRLSRSGSSPEMKDKPRVL 1471
Query: 178 KTTPTGYPQNPIKTYP 193
+ +G +P P
Sbjct: 1472 QRAQSGTDSSPEHKIP 1487
Score = 34.3 bits (77), Expect = 5.7
Identities = 33/134 (24%), Positives = 57/134 (41%), Gaps = 28/134 (20%)
Query: 67 PVDQAYTPAAEVRNPSQP--QKSRIQPQQHKHCKSSPLENDGGFHNQPPPRTSSFSSF-- 122
P ++ TP R+ S P QKS+ P+Q + P G PPR S ++
Sbjct: 685 PKQKSQTPTRRSRSGSSPPKQKSKTPPRQSRSNSPQPKVKSG-----TPPRPGSVTNMQA 739
Query: 123 -----FPRSVSHPSSHNPTNKPLQQRTLSLSLPQRQALTNACPKMATQKRKQQTPTPKTH 177
P+ SH S + + ++ RT P RQ+ + + P++ + +Q+P+ +
Sbjct: 740 DECTATPQRQSH--SESSPDGEVKSRT-----PSRQSCSGSSPRVKSSTPPRQSPSRSSS 792
Query: 178 KTTPTGYPQNPIKT 191
PQ +KT
Sbjct: 793 -------PQPKVKT 799
>UniRef100_Q9GPS9 Hypothetical protein [Dictyostelium discoideum]
Length = 1220
Score = 40.8 bits (94), Expect = 0.061
Identities = 30/128 (23%), Positives = 52/128 (40%), Gaps = 5/128 (3%)
Query: 67 PVDQAYTPAAEVRNPSQPQKSRIQ--PQQHKHCKSSPLENDGGFHNQPPPRTSSFSSFFP 124
P D + P A P+ P R+ P Q + + +EN F +P P + + S
Sbjct: 730 PTDTSSPPNATTPQPTPPPLKRVAKPPVQQQQPSNENIENITQFKLKPSPASPTSPSSPT 789
Query: 125 RSVSHPSSHNPTNKPLQQRTLSL---SLPQRQALTNACPKMATQKRKQQTPTPKTHKTTP 181
++ P PL++ + S P +A T + P +A + + P + T+P
Sbjct: 790 IDPISTTTKPPARPPLKKSAAAAAPPSPPNEEATTTSPPTLAAKPKVALRNGPSSAPTSP 849
Query: 182 TGYPQNPI 189
PQ P+
Sbjct: 850 LSQPQQPL 857
>UniRef100_UPI0000437029 UPI0000437029 UniRef100 entry
Length = 1010
Score = 40.4 bits (93), Expect = 0.080
Identities = 39/125 (31%), Positives = 51/125 (40%), Gaps = 8/125 (6%)
Query: 66 PPVDQAYTPAAEVRNPSQP--QKSRIQPQQHKHCKSSPLENDGGFHNQPPP-RTSSFSSF 122
PP + + R SQP Q IQP Q + K P +QPPP + S
Sbjct: 258 PPAQPGQARSGKPRPASQPASQPPPIQPGQARSGKPRPASQPA---SQPPPAQPGQARSG 314
Query: 123 FPRSVSHPSSHNPTNKPLQQRTLSLSLPQRQALTNACPKMATQKRKQQTPTPKTHKTTPT 182
PR S P+S P +P Q R S P R A A +Q R Q +P + P
Sbjct: 315 KPRPASQPASQPPPIQPGQARPGQAS-PGRPASQPASHPQPSQARPGQA-SPGRPASQPA 372
Query: 183 GYPQN 187
+PQ+
Sbjct: 373 SHPQS 377
Score = 38.1 bits (87), Expect = 0.40
Identities = 38/126 (30%), Positives = 50/126 (39%), Gaps = 11/126 (8%)
Query: 66 PPVDQAYTPAAEVRNPSQP--QKSRIQPQQHKHCKSSPLENDGGFHNQPPP-RTSSFSSF 122
PP + + R SQP Q IQP Q + K P +QPPP + S
Sbjct: 6 PPAQPGQARSGKPRPASQPASQPPPIQPGQARSGKPRPASQPA---SQPPPIQPGQARSG 62
Query: 123 FPRSVSHPSSHNPTNKPLQQRTLSLSLPQRQALTNACPKMAT--QKRKQQTPTPKTHKTT 180
PR S P+S P +P Q R+ + A A P A Q R+ Q P +
Sbjct: 63 KPRPASQPASQPPPAQPGQARSGKPRPASQPASQPATPNPARPGQVRQAQAGQPASQ--- 119
Query: 181 PTGYPQ 186
P +PQ
Sbjct: 120 PASHPQ 125
Score = 37.0 bits (84), Expect = 0.88
Identities = 37/132 (28%), Positives = 50/132 (37%), Gaps = 15/132 (11%)
Query: 66 PPVDQAYTPAAEVRNPSQP--QKSRIQPQQHKHCKSSPLENDGGFHNQPPP-RTSSFSSF 122
PP + + R SQP Q IQP Q + K P +QPPP + S
Sbjct: 148 PPAQPGQARSGKPRPASQPASQPPPIQPGQARSGKPRPASQPA---SQPPPIQPGQARSG 204
Query: 123 FPRSVSHPSSHNPTNKPLQQRTLSLSLPQRQAL-----TNACPKMATQKRKQQTPT---- 173
PR S P+S P +P Q R S Q + + P+ A+Q Q P
Sbjct: 205 KPRPASQPASQPPPAQPGQARPASQPASQPPPIQPGQARSGKPRPASQPASQPPPAQPGQ 264
Query: 174 PKTHKTTPTGYP 185
++ K P P
Sbjct: 265 ARSGKPRPASQP 276
>UniRef100_O08847 RNA polymerase II largest subunit [Mus musculus]
Length = 1966
Score = 40.4 bits (93), Expect = 0.080
Identities = 35/124 (28%), Positives = 50/124 (40%), Gaps = 10/124 (8%)
Query: 67 PVDQAYTPAAEVRNPSQPQKSRIQPQQHKHCKSSPLENDGG--FHNQPPPRTSSFSSFFP 124
P YTP + +P+ P S P + +SP + + Q P T S S+ P
Sbjct: 1771 PTSPNYTPTSPNYSPTSPSYSPTSPS---YSPTSPSYSPSSPRYTPQSPTYTPSSPSYSP 1827
Query: 125 RSVSHPSSHNPTNKPLQQRTLSLSLPQRQALTNACPKMATQKRKQQTPTPKTHKTTPTGY 184
S S++PT+ + S S P T A PK + K +PK T+PT
Sbjct: 1828 SS----PSYSPTSPKYTPTSPSYS-PSSPEYTPASPKYSPTSPKYSPTSPKYSPTSPTYS 1882
Query: 185 PQNP 188
P P
Sbjct: 1883 PTTP 1886
Score = 39.3 bits (90), Expect = 0.18
Identities = 31/125 (24%), Positives = 50/125 (39%), Gaps = 13/125 (10%)
Query: 67 PVDQAYTPAAEVRNPSQPQKSRIQPQQHKHCKSSPLENDGGFHNQPPPRTSSFSSFFPRS 126
P +Y+P + +PS P R PQ + SSP + P + S+S P+
Sbjct: 1792 PTSPSYSPTSPSYSPSSP---RYTPQSPTYTPSSPSYS---------PSSPSYSPTSPKY 1839
Query: 127 VSHPSSHNPTNKPLQQRTLSLSLPQRQALTNACPKMATQKRKQQTPTPKTHKTTPTGYPQ 186
S++P++ + S P + PK + TPK T+PT P
Sbjct: 1840 TPTSPSYSPSSPEYTPASPKYS-PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPT 1898
Query: 187 NPIKT 191
+P+ T
Sbjct: 1899 SPVYT 1903
Score = 36.6 bits (83), Expect = 1.2
Identities = 31/127 (24%), Positives = 47/127 (36%), Gaps = 9/127 (7%)
Query: 67 PVDQAYTPAAEVRNPSQPQKSRIQPQQHKHCKSSPLENDGGFHNQPP-----PRTSSFSS 121
P YTP++ +PS P S P K+ +SP + P P + +S
Sbjct: 1813 PQSPTYTPSSPSYSPSSPSYSPTSP---KYTPTSPSYSPSSPEYTPASPKYSPTSPKYSP 1869
Query: 122 FFPRSVSHPSSHNPTNKPLQQRTLSLSLPQRQALTNACPKMATQKRKQQTPTPKTHKTTP 181
P+ +++PT P T P T PK + +PK T+P
Sbjct: 1870 TSPKYSPTSPTYSPTT-PKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSP 1928
Query: 182 TGYPQNP 188
T P +P
Sbjct: 1929 TYSPTSP 1935
>UniRef100_Q9Z213 Hypothetical protein [Rattus norvegicus]
Length = 738
Score = 40.4 bits (93), Expect = 0.080
Identities = 32/93 (34%), Positives = 44/93 (46%), Gaps = 9/93 (9%)
Query: 101 PLENDGGFHNQPPPRTSSFSSFFPRSV--SHPSSHNPTNKPLQQRTLSLSLPQRQALTNA 158
PL + NQPPP S P S S P S P+ P Q T SLP Q+ T
Sbjct: 400 PLPSPKTTENQPPPPPPSQPPSQPLSQPPSQPPSQPPSQLPRQSLTPKPSLPPGQSPT-- 457
Query: 159 CPKMATQKRKQQTPTPKTHKTTPTGYPQNPIKT 191
PK + Q R+ P P+ ++ P G P +P+++
Sbjct: 458 -PKRSPQPRQ---PLPR-RRSLPPGQPPSPLRS 485
>UniRef100_Q924W1 ALEX protein [Rattus norvegicus]
Length = 356
Score = 40.4 bits (93), Expect = 0.080
Identities = 32/93 (34%), Positives = 44/93 (46%), Gaps = 9/93 (9%)
Query: 101 PLENDGGFHNQPPPRTSSFSSFFPRSV--SHPSSHNPTNKPLQQRTLSLSLPQRQALTNA 158
PL + NQPPP S P S S P S P+ P Q T SLP Q+ T
Sbjct: 18 PLPSPKTTENQPPPPPPSQPPSQPLSQPPSQPPSQPPSQLPRQSLTPKPSLPPGQSPT-- 75
Query: 159 CPKMATQKRKQQTPTPKTHKTTPTGYPQNPIKT 191
PK + Q R+ P P+ ++ P G P +P+++
Sbjct: 76 -PKRSPQPRQ---PLPR-RRSLPPGQPPSPLRS 103
>UniRef100_Q9VK09 CG6043-PA, isoform A [Drosophila melanogaster]
Length = 759
Score = 40.4 bits (93), Expect = 0.080
Identities = 38/148 (25%), Positives = 56/148 (37%), Gaps = 22/148 (14%)
Query: 56 PTRVGKFYFGPPVDQAYTPAAEVRNPSQPQKSRI--QPQQHKHCKSSPLENDGGFHNQPP 113
PT VG Y P + P++PQ RI Q QQ + SP+ Q
Sbjct: 501 PTNVGSLYIAP-----------LAQPTEPQAQRILLQQQQQSSARDSPMRQ----LPQQQ 545
Query: 114 PRTSS----FSSFFPRSVSHPSSHNPTNKPLQQRTLSLSLPQRQALTNACPKMATQKRKQ 169
P+T+ SS P + N + TL + PQ Q + P+ Q ++Q
Sbjct: 546 PQTNQPMRWLSSQPASKEQAPWARLEENGNVLPSTLRQTTPQPQVVPQQQPQQQQQPQQQ 605
Query: 170 QTPT-PKTHKTTPTGYPQNPIKTYPLRI 196
Q PT + GY P+ P+ +
Sbjct: 606 QQPTFYQPQLVQGNGYGPTPVSAAPISL 633
>UniRef100_Q8IP76 CG6043-PD, isoform D [Drosophila melanogaster]
Length = 918
Score = 40.4 bits (93), Expect = 0.080
Identities = 38/148 (25%), Positives = 56/148 (37%), Gaps = 22/148 (14%)
Query: 56 PTRVGKFYFGPPVDQAYTPAAEVRNPSQPQKSRI--QPQQHKHCKSSPLENDGGFHNQPP 113
PT VG Y P + P++PQ RI Q QQ + SP+ Q
Sbjct: 501 PTNVGSLYIAP-----------LAQPTEPQAQRILLQQQQQSSARDSPMRQ----LPQQQ 545
Query: 114 PRTSS----FSSFFPRSVSHPSSHNPTNKPLQQRTLSLSLPQRQALTNACPKMATQKRKQ 169
P+T+ SS P + N + TL + PQ Q + P+ Q ++Q
Sbjct: 546 PQTNQPMRWLSSQPASKEQAPWARLEENGNVLPSTLRQTTPQPQVVPQQQPQQQQQPQQQ 605
Query: 170 QTPT-PKTHKTTPTGYPQNPIKTYPLRI 196
Q PT + GY P+ P+ +
Sbjct: 606 QQPTFYQPQLVQGNGYGPTPVSAAPISL 633
>UniRef100_Q8IP74 CG6043-PC, isoform C [Drosophila melanogaster]
Length = 836
Score = 40.4 bits (93), Expect = 0.080
Identities = 38/148 (25%), Positives = 56/148 (37%), Gaps = 22/148 (14%)
Query: 56 PTRVGKFYFGPPVDQAYTPAAEVRNPSQPQKSRI--QPQQHKHCKSSPLENDGGFHNQPP 113
PT VG Y P + P++PQ RI Q QQ + SP+ Q
Sbjct: 578 PTNVGSLYIAP-----------LAQPTEPQAQRILLQQQQQSSARDSPMRQ----LPQQQ 622
Query: 114 PRTSS----FSSFFPRSVSHPSSHNPTNKPLQQRTLSLSLPQRQALTNACPKMATQKRKQ 169
P+T+ SS P + N + TL + PQ Q + P+ Q ++Q
Sbjct: 623 PQTNQPMRWLSSQPASKEQAPWARLEENGNVLPSTLRQTTPQPQVVPQQQPQQQQQPQQQ 682
Query: 170 QTPT-PKTHKTTPTGYPQNPIKTYPLRI 196
Q PT + GY P+ P+ +
Sbjct: 683 QQPTFYQPQLVQGNGYGPTPVSAAPISL 710
>UniRef100_Q86PD9 RE65015p [Drosophila melanogaster]
Length = 756
Score = 40.4 bits (93), Expect = 0.080
Identities = 38/148 (25%), Positives = 56/148 (37%), Gaps = 22/148 (14%)
Query: 56 PTRVGKFYFGPPVDQAYTPAAEVRNPSQPQKSRI--QPQQHKHCKSSPLENDGGFHNQPP 113
PT VG Y P + P++PQ RI Q QQ + SP+ Q
Sbjct: 501 PTNVGSLYIAP-----------LAQPTEPQAQRILLQQQQQSSARDSPMRQ----LPQQQ 545
Query: 114 PRTSS----FSSFFPRSVSHPSSHNPTNKPLQQRTLSLSLPQRQALTNACPKMATQKRKQ 169
P+T+ SS P + N + TL + PQ Q + P+ Q ++Q
Sbjct: 546 PQTNQPMRWLSSQPASKEQAPWARLEENGNVLPSTLRQTTPQPQVVPQQQPQQQQQPQQQ 605
Query: 170 QTPT-PKTHKTTPTGYPQNPIKTYPLRI 196
Q PT + GY P+ P+ +
Sbjct: 606 QQPTFYQPQLVQGNGYGPTPVSAAPISL 633
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.321 0.137 0.432
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 681,744,482
Number of Sequences: 2790947
Number of extensions: 31585570
Number of successful extensions: 94797
Number of sequences better than 10.0: 312
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 320
Number of HSP's that attempted gapping in prelim test: 94022
Number of HSP's gapped (non-prelim): 882
length of query: 372
length of database: 848,049,833
effective HSP length: 129
effective length of query: 243
effective length of database: 488,017,670
effective search space: 118588293810
effective search space used: 118588293810
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 75 (33.5 bits)
Lotus: description of TM0060.15