BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0058b.2
(1371 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q6L3H0 Putative receptor kinase [Solanum demissum] 1221 0.0
UniRef100_Q6L3Q0 Putative polyprotein [Solanum demissum] 1165 0.0
UniRef100_Q710T7 Gag-pol polyprotein [Populus deltoides] 838 0.0
UniRef100_Q9XII7 Putative retroelement pol polyprotein [Arabidop... 804 0.0
UniRef100_Q9SIM3 Putative retroelement pol polyprotein [Arabidop... 780 0.0
UniRef100_O81617 F8M12.17 protein [Arabidopsis thaliana] 770 0.0
UniRef100_Q5XWR5 Putative retroelement pol polyprotein-like [Sol... 760 0.0
UniRef100_O04543 F20P5.25 protein [Arabidopsis thaliana] 758 0.0
UniRef100_Q7XE85 Putative pol polyprotein [Oryza sativa] 751 0.0
UniRef100_Q9FX79 Putative retroelement polyprotein [Arabidopsis ... 748 0.0
UniRef100_Q9C692 Polyprotein, putative [Arabidopsis thaliana] 736 0.0
UniRef100_Q5XWK9 Gag-pol polyprotein-like [Solanum tuberosum] 731 0.0
UniRef100_Q9LFY6 T7N9.5 [Arabidopsis thaliana] 726 0.0
UniRef100_Q9SA17 F28K20.17 protein [Arabidopsis thaliana] 716 0.0
UniRef100_Q94KV0 Polyprotein [Arabidopsis thaliana] 712 0.0
UniRef100_O23302 Retrovirus-related like polyprotein [Arabidopsi... 695 0.0
UniRef100_Q9SLF0 Putative retroelement pol polyprotein [Arabidop... 693 0.0
UniRef100_Q8S805 Putative copia-type polyprotein [Oryza sativa] 667 0.0
UniRef100_Q6L3N8 Putative gag-pol polyprotein [Solanum demissum] 666 0.0
UniRef100_Q8L4X0 Putative pol polyprotein [Oryza sativa] 650 0.0
>UniRef100_Q6L3H0 Putative receptor kinase [Solanum demissum]
Length = 1358
Score = 1221 bits (3158), Expect = 0.0
Identities = 659/1417 (46%), Positives = 896/1417 (62%), Gaps = 113/1417 (7%)
Query: 3 TSSKLTDIKLDGDGENYVEWKYLVAVSLGGMGKDEHLTGSC----------PTNATAAAK 52
+SS + +L NY+ W V + G G +HLT +A A A+
Sbjct: 5 SSSPIITSELLLGSSNYLSWASSVELWCKGQGVQDHLTNKAYEVDVKAKTSEEDAKAKAQ 64
Query: 53 WKMDDKRILALLVNSVDKRTQSVITHCQTVKELWEFLQFIFGKADNLNRIYALLQ*IFRP 112
W+ D ++ +LL S+D + + QT +WE + ++ ++++R Y ++ +
Sbjct: 65 WEKVDAQLCSLLWRSIDFKLMPLFRPFQTCYTVWEKARALY--TNDISRFYDVISRLTNL 122
Query: 113 KQDKRKLMDYFLEFKKYAEELTSLLSCKTK-EDMLAQQKKLIALSWLSGLDQEFEVVRSQ 171
K+ + + Y + + EE +L+ T E ++ L + L+GL + + VR Q
Sbjct: 123 KKQESDMSTYLGQVQAVMEEFDTLMPVTTNVEKQQEHRQTLFLVLTLAGLPPDHDSVRDQ 182
Query: 172 ILSSKQVDTLTDVFSRVMQSSFEKPKPAPDVDTSDRSALAAHSGFRGGRGGGRGGRGGAR 231
IL+S V T+ ++FSR+++ + T D S LA+ + + RGG
Sbjct: 183 ILASPTVPTIDELFSRLLRLAAPPSHKVVSSPTVDSSILASQTFEKRTYQSMENRRGG-- 240
Query: 232 GRGGRFGQ--IQCYSCGELGHYKN*C------PNSQQH--QQHFQQSAPNRFANNVSQSD 281
GRFG+ +C C + GH ++ C P S + + + NR + S
Sbjct: 241 ---GRFGKPRSKCSHCHKPGHTRDICYILHGPPPSYDPIVLKEYNEFLRNRASKQTSPPV 297
Query: 282 VIQTQPEK--RTVVMSDDEFARYTQFQISQQSASPSSSTAT--FVQTGNPTVCLS--STS 335
QP + ++ E+ + Q++ ++Q++ S A GN C+S ST
Sbjct: 298 AYGAQPNQPSNNAHIAQTEYDEFLQYRANKQTSPQVVSVAQPDVSVAGNSFACVSQSSTL 357
Query: 336 RRWIIDSGATNHMTGDSGIFLSFSSSSIHSSVTLADGSIVRVKGSGCTTPVSTLPMSSVL 395
W++DSGA++H++G+ + S ++TLA+G + KG G P+S++ + SVL
Sbjct: 358 GTWVMDSGASDHISGNKSLLSDIVYSQSLPAITLANGIQTKPKGVGKAKPLSSVTLDSVL 417
Query: 396 YLPQFPCNLLSISKITRSLKCSVTFFPDSCVFQDLSTQRIIGRGRESDGLYLLDEGVSKA 455
Y+P P NL S+S++T++L CS+TFF D + QD ST ++IG G ES GLY L S
Sbjct: 418 YVPGSPFNLASVSRLTKALHCSITFFDDFFLMQDRSTGQMIGTGHESQGLYYL---TSSN 474
Query: 456 STAYRTSSVSPFQLHCRLGHPSLGVLRKLCPQLESLSNFSCESCQFAKHHRSVYLPRLNK 515
S A + + SP +H RLGH SL L+K+ P L SLS CESCQ KH R+ +
Sbjct: 475 SLAACSITDSPDLIHKRLGHSSLSKLQKMVPSLSSLSTLDCESCQLGKHTRATFSRSTEG 534
Query: 516 RAMSLFHIVHSDVWGPCPVTSKLGYKYFVTFVDDYSRATWLYLMKSRSELFTIFCNFCAE 575
R+ S+F +VHSD+WGP V+S LG++YFV+F+DDYS+ TW++LMK RSELF+IF +F AE
Sbjct: 535 RSESIFSLVHSDIWGPSRVSSTLGFRYFVSFIDDYSKCTWVFLMKDRSELFSIFKSFFAE 594
Query: 576 IRTQFNCPIHILRSDNAKEYFSAPFRTFMDKHGMIHQSSCIVTPQQNGVAERKNRHLMEV 635
I+ QF I RSDNA EY S+ FR FM G+IHQ++C TPQQNGVAERKNRHL+E
Sbjct: 595 IQNQFGVSIRTFRSDNALEYLSSQFREFMTHQGIIHQTTCPYTPQQNGVAERKNRHLIET 654
Query: 636 AQALMFQMKVPKCFWADAVLTAAYLINRMPSTVLNGVIPYSVLFPSCSLFPLPPKVFGCT 695
A+ L+ + VP FW DAVLT+ YLINRMPS+ + +P+S+LFP L+P+PP+VFG T
Sbjct: 655 ARTLLLESNVPLRFWGDAVLTSCYLINRMPSSSIQNQVPHSILFPQSHLYPIPPRVFGST 714
Query: 696 CFVLDVRPQVTKLDPKSLKCVFLGYSRTQKGYRCFSPALGRYLVSADVTFFE-------- 747
CFV ++ P KL P++LKCVFLGYSR QKGYRC+S L RYL+SADVTFFE
Sbjct: 715 CFVHNLAPGKDKLAPRALKCVFLGYSRVQKGYRCYSHDLHRYLMSADVTFFESQPYYTSS 774
Query: 748 ---DCSFSGWLPSSFPVCESEDTFLTYITTSPAPQTTTGTGFQFYEKTYSRRPKSSAPPP 804
D S +P PV TF+ TS +P TY RRP+ + P
Sbjct: 775 NHPDVSMVLPIPQVLPV----PTFVESTVTSTSPVVVPPL------LTYHRRPRPTLVPD 824
Query: 805 DTQSLPSIPLVSSDPHDNLDLP-----IALRKGKRTCSYPISSYVTSNKLSPASKSFVAA 859
D+ P DP DLP +AL+KG
Sbjct: 825 DSCHAP-------DPAPTADLPPPSQPLALQKG--------------------------- 850
Query: 860 LDSVSVPKSLSDALSHAGWRQAMEEEMLALEHNATWDLVPLPAGKQVVGCKWVYTTKVNP 919
+ALSH+GWRQAM +EM AL + TW+LV LPAGK VGC+WVY K+ P
Sbjct: 851 -----------EALSHSGWRQAMVDEMSALHKSGTWELVSLPAGKSTVGCRWVYAVKIGP 899
Query: 920 DGSLARLKARLVAKGYAQTYGVDYTDTFSPVAKLSSVRILISLAATNHWPLFQLDVKNAF 979
DG + RLKARLVAKGY Q +G+DY+DTF+PVAK++SVR+ +S+AA HWPL QLD+KNAF
Sbjct: 900 DGQVDRLKARLVAKGYTQIFGLDYSDTFAPVAKIASVRLFLSMAAVRHWPLHQLDIKNAF 959
Query: 980 LHGDLQDEVYMEQPPGFVAQGECGK-VCRLKKSLYGLKQSPRSWFGRFSDVVMEFGLRRS 1038
LHGDL++EVYMEQPPGFVAQGE VCRL++SLYGLKQSPR+WFG+FS V+ EFG+ RS
Sbjct: 960 LHGDLEEEVYMEQPPGFVAQGESSSLVCRLRRSLYGLKQSPRAWFGKFSTVIQEFGMTRS 1019
Query: 1039 ESDHTVFFKQTNKG-CILLVVYVDDIVITGSDSEGIGNLKTFLQMKFQTKDLGILKYFLG 1097
+DH+VF++ + CI LVVYVDDIVITG+D +GI +LK L FQTKDLG LKYFLG
Sbjct: 1020 GADHSVFYRHSAPSRCIYLVVYVDDIVITGNDQDGITDLKQHLFKHFQTKDLGRLKYFLG 1079
Query: 1098 IEVVYSKNGIMISQRKYVLDMLAETGLMGSKPCETPMEPGMKLT-AEGVPFSDPQQYRRL 1156
IEV S++GI+ISQRKY LD+L ETG+MG +P +TPM+P +KL +G P S+P++YRRL
Sbjct: 1080 IEVAQSRSGIVISQRKYALDILEETGMMGCRPVDTPMDPNVKLLPGQGEPLSNPERYRRL 1139
Query: 1157 VGKLNYLTVTRPDIAFPVSVVSQFMSSPTDAHWEALIRIVKYLKKAPGRGIVYRDHGHMR 1216
VGKLNYLTVTRPDI+FPVSVVSQFM+SP D+HWEA++RI++Y+K APG+G+++ D GH
Sbjct: 1140 VGKLNYLTVTRPDISFPVSVVSQFMTSPCDSHWEAVVRILRYIKSAPGKGLLFEDQGHEH 1199
Query: 1217 VEAFSDADWAGSPMDRKSTTGYCVFLGGNLISWKSKKQNVVARSSAEAEYRAMAQTTC-- 1274
+ ++DADWAGSP DR+ST+GYCV +GGNL+SWKSKKQNVVARSSAE+EYRAMA TC
Sbjct: 1200 IIGYTDADWAGSPSDRRSTSGYCVLVGGNLVSWKSKKQNVVARSSAESEYRAMATATCEL 1259
Query: 1275 MWVGQILSEMGIERISPMKLWCDNQAALHISSNPVFHERTKHIEVDCHFIREKLQQNLIS 1334
+W+ Q+L E+ ++ M+L CDNQAALHI+SNPVFHERTKHIE+DCHF+REK+ I
Sbjct: 1260 VWIKQLLGELKFGKVDKMELVCDNQAALHIASNPVFHERTKHIEIDCHFVREKILSGDIV 1319
Query: 1335 TSYVRTGDQLADVFTKALNGVRNDFICNKLGMINIYA 1371
T +V++ DQLAD+FTK+L R ++ICNKLG ++YA
Sbjct: 1320 TKFVKSNDQLADIFTKSLTCPRINYICNKLGTYDLYA 1356
>UniRef100_Q6L3Q0 Putative polyprotein [Solanum demissum]
Length = 1336
Score = 1165 bits (3015), Expect = 0.0
Identities = 626/1235 (50%), Positives = 802/1235 (64%), Gaps = 119/1235 (9%)
Query: 5 SKLTDIKLDGDGENYVEWKYLVAVSLGGMGKDEHLTGSCPTNATAAAKWKMDDKRILALL 64
SK+TD KL+G NY++W + + L + KD+HL PT+ A W DD R++ +
Sbjct: 16 SKITDSKLNGS--NYLDWSRKIRIYLRSVEKDDHLIQDPPTDDAKKA-WLRDDARLILQI 72
Query: 65 VNSVDKRTQSVITHCQTVKELWEFLQFIFGKADNLNRIYALLQ*IFRPKQDKRKLMDYFL 124
+NS+D ++ HC+ VKEL ++L++++ NL+RIY + + +R +++ + L YF+
Sbjct: 73 INSIDNEVVGLVNHCEFVKELMDYLEYLYSGKGNLSRIYEVSKAFYRSEKEAKSLTTYFM 132
Query: 125 EFKKYAEELTSLLSCKTK-EDMLAQQKKLIALSWLSGLDQEFEVVRSQILSSKQVDTLTD 183
EFKK EEL LL T + AQ++++ +S+L+GL EFE +SQILSS ++ +L D
Sbjct: 133 EFKKTYEELNVLLPFSTDIKVQQAQREQMAIMSFLAGLPSEFETAKSQILSSSEITSLKD 192
Query: 184 VFSRVMQSSFEKPKPAPDVDTSDRSALAAHSG-------------------FRGGRGGGR 224
VFS+V+++ +V + ++G + G+
Sbjct: 193 VFSQVLRTESTPANQQTNVLVAKGGGGRNNAGRWNNNNDAGKWNNNKDGEKWNHNNDAGK 252
Query: 225 GGRGGARGR-------------------GGRFGQIQ-CYSCGELGHYKN*CPNSQQHQQH 264
GR GR+ C C E GH + C Q H Q
Sbjct: 253 WNHNNDAGRWNNKNNVGVWNNNKEGNNDAGRWNNDNTCRYCKEPGHIRRNCKKLQLHNQQ 312
Query: 265 FQQSAPNRFANNVSQSDVIQTQPEKRTVVMSDDEFARYTQFQISQQSASPSSSTATFVQT 324
Q +A V T TV +S DE+AR T++Q S + S + S
Sbjct: 313 TQTAA------------VAATSSSPSTVTISADEYARLTKYQESMPAPSLNES------- 353
Query: 325 GNPTVCLSSTSRRWIIDSGATNHMTGDSGIFLSFSSSSIHSSVTLADGSIVRVKGSGCTT 384
GN CL S+S WIIDSGAT+HMTG+ F F + + SSVT+ DGS ++GSG
Sbjct: 354 GNK--CLISSSSNWIIDSGATDHMTGNPKFFSKFQAHKVPSSVTIVDGSSYTIEGSGTVN 411
Query: 385 PVSTLPMSSVLYLPQFPCNLLSISKITRSLKCSVTFFPDSCVFQDLSTQRIIGRGRESDG 444
S++ +SSVL LP NL+S+SK+T+ LKC V+ +PD C+FQDL T++IIG+ SDG
Sbjct: 412 HTSSITLSSVLGLPSHAFNLISVSKLTKELKCFVSLYPDHCLFQDLMTKQIIGKRHVSDG 471
Query: 445 LYLLDEGVSKASTAYRTSSVSPFQLHCRLGHPSLGVLRKLCPQLESLSNFSCESCQFAKH 504
LY+LDE + +S VSPF+ HCRLGHPSL VL+KLCPQ ++ + CESC FAKH
Sbjct: 472 LYILDEWTPPSVAC--SSIVSPFEAHCRLGHPSLPVLKKLCPQFHNVPSIDCESCHFAKH 529
Query: 505 HRSVYLPRLNKRAMSLFHIVHSDVWGPCPVTSKLGYKYFVTFVDDYSRATWLYLMKSRSE 564
HR PR NKRA F +VHSDVWGPCPV SK+G++YFVTF+DD+SR TW+Y MK+RSE
Sbjct: 530 HRISLSPRNNKRANFAFELVHSDVWGPCPVVSKVGFRYFVTFMDDFSRMTWIYFMKNRSE 589
Query: 565 LFTIFCNFCAEIRTQFNCPIHILRSDNAKEYFSAPFRTFMDKHGMIHQSSCIVTPQQNGV 624
+F+ F NFCAEI+TQFN +HILRSDNA+E+ SA F+ +M+++G++HQSSC+ TP QNGV
Sbjct: 590 VFSHFSNFCAEIKTQFNASVHILRSDNAREFMSASFQNYMNQYGILHQSSCVDTPSQNGV 649
Query: 625 AERKNRHLMEVAQALMFQMKVPKCFWADAVLTAAYLINRMPSTVLNGVIPYSVLFPSCSL 684
AERKNRHL+E A+ L+FQMKVPK FWAD V TA++LINRMPSTVLNG IPY VLFP+ L
Sbjct: 650 AERKNRHLLETARVLLFQMKVPKQFWADTVSTASFLINRMPSTVLNGDIPYGVLFPNKPL 709
Query: 685 FPLPPKVFGCTCFVLDVRPQVTKLDPKSLKCVFLGYSRTQKGYRCFSPALGRYLVSADVT 744
FPL PKVFG TC+V DVRP +TKLDPK+LKCVFLGYSR QKGYRC+SP L RY+VS DV
Sbjct: 710 FPLEPKVFGSTCYVRDVRPHITKLDPKALKCVFLGYSRLQKGYRCYSPTLNRYMVSIDVV 769
Query: 745 FFEDCSFSGWLPSSFPVC--ESEDTFLTYITT---SPAPQTTTGTGFQFYEKTYSRRPKS 799
F E SF P +FP + ++ +L Y TT S + G+ Q E S P +
Sbjct: 770 FSESISFFS-SPDTFPTQGQQEDEEWLIYRTTPSRSEQHKEVPGSVEQSMENVSSDAPLA 828
Query: 800 SAPPPDTQ----------SLPSIPLVSSDP-------HDNLDLPIALRKGKRTCSYPISS 842
PP Q + P+ L SSDP +NLD+PIALRK
Sbjct: 829 QTKPPIVQVYSRRQVTNDTCPAPTLSSSDPLPVNPSPTENLDIPIALRK----------- 877
Query: 843 YVTSNKLSPASKSFVAALDSVSVPKSLSDALSHAGWRQAMEEEMLALEHNATWDLVPLPA 902
DS+ VPK++ +AL+H GW AM +E+ AL+ N TW+LV LP
Sbjct: 878 ------------------DSIFVPKTVREALNHPGWYDAMLDEIHALDDNHTWNLVDLPK 919
Query: 903 GKQVVGCKWVYTTKVNPDGSLARLKARLVAKGYAQTYGVDYTDTFSPVAKLSSVRILISL 962
GK+ VGCKWV+T KVNPDGS+ARLKARLVAKGYAQTYGVDY+DTFSPVAKL+SVR+ ISL
Sbjct: 920 GKKAVGCKWVFTIKVNPDGSMARLKARLVAKGYAQTYGVDYSDTFSPVAKLTSVRLFISL 979
Query: 963 AATNHWPLFQLDVKNAFLHGDLQDEVYMEQPPGFVAQGECGKVCRLKKSLYGLKQSPRSW 1022
AA+ +WPL QL +KNAFLHGDLQ+EVYMEQPPGFVAQGE GKVC LKK LYGLKQSPR+W
Sbjct: 980 AASQNWPLHQLAIKNAFLHGDLQEEVYMEQPPGFVAQGENGKVCHLKKPLYGLKQSPRAW 1039
Query: 1023 FGRFSDVVMEFGLRRSESDHTVFFKQTNKGCILLVVYVDDIVITGSDSEGIGNLKTFLQM 1082
FG+FS+VV +FGL +S DH+VF++Q+ G ILLVVYVDDIVIT SD GI +LK FL
Sbjct: 1040 FGKFSEVVQKFGLTKSNCDHSVFYRQSAVGIILLVVYVDDIVITRSDYAGISSLKLFLHS 1099
Query: 1083 KFQTKDLGILKYFLGIEVVYSKNGIMISQRKYVLDMLAETGLMGSKPCETPMEPGMKLT- 1141
F TKDLG LKYFLGIEV SK GI +SQRKY+LD+L ETG +KPC TPM P +LT
Sbjct: 1100 MFHTKDLGQLKYFLGIEVSRSKKGIFLSQRKYILDLLEETGKSAAKPCSTPMVPNTQLTN 1159
Query: 1142 AEGVPFSDPQQYRRLVGKLNYLTVTRPDIAFPVSV 1176
+G PF DP++YRRLVGKLNYLTVTRPDI+F VS+
Sbjct: 1160 DDGDPFDDPERYRRLVGKLNYLTVTRPDISFAVSI 1194
Score = 147 bits (372), Expect = 2e-33
Identities = 66/79 (83%), Positives = 76/79 (95%)
Query: 1293 KLWCDNQAALHISSNPVFHERTKHIEVDCHFIREKLQQNLISTSYVRTGDQLADVFTKAL 1352
KLWCDNQAALHI+SNPV+HERTKHIEVDCHFIREK+Q+NLISTSYV+TG+QLAD+FTKAL
Sbjct: 1256 KLWCDNQAALHIASNPVYHERTKHIEVDCHFIREKIQENLISTSYVKTGEQLADLFTKAL 1315
Query: 1353 NGVRNDFICNKLGMINIYA 1371
G R +++CNKLGMINIYA
Sbjct: 1316 TGARVNYLCNKLGMINIYA 1334
>UniRef100_Q710T7 Gag-pol polyprotein [Populus deltoides]
Length = 1382
Score = 838 bits (2164), Expect = 0.0
Identities = 523/1410 (37%), Positives = 767/1410 (54%), Gaps = 90/1410 (6%)
Query: 7 LTDIKLDGDGENYVEWKYLVAVSLGGMGKDEHLTGS--CPTNA-----TAAAKWKMDDKR 59
L + + DG+NY W Y++ L G +++G+ P N + W+ ++ +
Sbjct: 9 LQSVSVRLDGKNYSYWSYVMRNFLKGKKMWGYVSGTYVVPKNTEEGDTVSIDTWEANNAK 68
Query: 60 ILALLVNSVDKRTQSVITHCQTVKELWEFLQFIFGKADNLNRIYALLQ*IFRPKQDKRKL 119
I+ + N V+ + + +T KE+W+ LQ +F ++ N + Y L I Q +
Sbjct: 69 IITWINNYVEHSIGTQLAKYETAKEVWDHLQRLFTQS-NFAKQYQLENDIRALHQKNMSI 127
Query: 120 MDYFLEFKKYAEEL--TSLLSCKTKEDMLAQQKKLIALSWLSGLDQEFEVVRSQILSSKQ 177
+++ ++L T + K + ++++ + +L+ L +FE +R IL
Sbjct: 128 QEFYSAMTDLWDQLALTESVELKACGAYIERREQQRLVQFLTALRSDFEGLRGSILHRSP 187
Query: 178 VDTLTDVFSRVMQSSFEKPKPAPD--VDTSDRSALAAHSGFRGGRGGGRGGRGGARGRGG 235
+ ++ V S ++ + + S+ S LA S +
Sbjct: 188 LPSVDSVVSELLAEEIRLQSYSEKGILSASNPSVLAVPS---------KPFSNHQNKPYT 238
Query: 236 RFGQIQCYSCGELGHYKN*CPNSQQHQQHFQQSAPNRFANNVSQSDVIQTQPEKRTVVMS 295
R G +C C + GH+K CP +Q Q ++ + ++ +N +S P T ++
Sbjct: 239 RVGFDECSFCKQKGHWKAQCPKLRQQNQAWKSGSQSQ--SNAHRSPQGYKPPHHNTAAVA 296
Query: 296 D-----DEFARYTQFQISQQSASPSSSTATFVQTGNPTVCLSSTSRRWIIDSGATNHMTG 350
D QFQ + S ++ Q + + +S + W++DSGA++HM+
Sbjct: 297 SPGSITDPNTLAEQFQKFLSLQPQAMSASSIGQLPHSSSGISHSE--WVLDSGASHHMSP 354
Query: 351 DSGIFLSFSSSSIHSSVTLADGSIVRVKGSGCTTPVSTLPMSSVLYLPQFPCNLLSISKI 410
DS F S S S +T ADG+ + + G G + L + +V +P+ NL SI +I
Sbjct: 355 DSSSFTSVSPLSSIPVMT-ADGTPMPLAGVGSVVTLH-LSLPNVYLIPKLKLNLASIGQI 412
Query: 411 TRSLKCSVTFFPDSCVFQDLSTQRIIGRGRESDGLYLLDEGVSKASTAYRTSSVSPFQL- 469
S V F C QDL +Q++IG GR +GLY+LDE A T +S F+L
Sbjct: 413 CDSGDYLVMFSGSFCCVQDLQSQKLIGTGRRENGLYILDELKVPVVVAATTVDLSFFRLS 472
Query: 470 ---------HCRLGHPSLGVLRKLCP-----QLESLSNFSCESCQFAKHHRSVYLPRLNK 515
H RLGH S LR L L++ C C+ AK ++ R
Sbjct: 473 LSSSSFYLWHSRLGHVSSSRLRFLASTGALGNLKTCDISDCSGCKLAKFS-ALPFNRSTS 531
Query: 516 RAMSLFHIVHSDVWGPCPVTSKLGYKYFVTFVDDYSRATWLYLMKSRSELFTIFCNFCAE 575
+ S F ++HSDVWGP PV++K G +Y+V+F+DD++R W+YLMK RSE F I+ F A
Sbjct: 532 VSSSPFDLIHSDVWGPSPVSTKGGSRYYVSFIDDHTRYCWVYLMKHRSEFFEIYAAFRAL 591
Query: 576 IRTQFNCPIHILRSDNAKEYFSAPFRTFMDKHGMIHQSSCIVTPQQNGVAERKNRHLMEV 635
I+TQ + I R D EY S F + G IHQ+SC TP+QNGVAERK+RH++E
Sbjct: 592 IKTQHSAVIKCFRCDLGGEYTSNKFCQMLALDGTIHQTSCTDTPEQNGVAERKHRHIVET 651
Query: 636 AQALMFQMKVPKCFWADAVLTAAYLINRMPSTVLNGVIPYSVLF---PSCSLFPLPPKVF 692
A++L+ V FW +AVLTA LIN +PS+ +G+ P+ L+ P S F +VF
Sbjct: 652 ARSLLLSAFVLSEFWGEAVLTAVSLINTIPSSHSSGLSPFEKLYGHVPDYSSF----RVF 707
Query: 693 GCTCFVLDVRPQVTKLDPKSLKCVFLGYSRTQKGYRCFSPALGRYLVSADVTFFEDCSFS 752
GCT FVL + KL +S CVFLGY +KGYRCF P + VS V F E F
Sbjct: 708 GCTYFVLHPHVERNKLSSRSAICVFLGYGEGKKGYRCFDPITQKLYVSHHVVFLEHIPFF 767
Query: 753 GWLPSSF------------PVCESEDTFLTYITTSPAPQTTTGTGFQFYEKTYSRRPKSS 800
+PS+ P E + S + GTG S P++S
Sbjct: 768 S-IPSTTHSLTKSDLIHIDPFSEDSGNDTSPYVRSICTHNSAGTG-----TLLSGTPEAS 821
Query: 801 APPPDTQSLPSIPLVSSDPHDNLDLPIALRKGKRTCSYPISSYVTSNKLSPASKSFVAAL 860
Q+ S +V P + I +RK + + S Y S + SF+A +
Sbjct: 822 FSSTAPQA--SSEIVDPPPRQS----IRIRKSTKLPDFAYSCY------SSSFTSFLAYI 869
Query: 861 DSVSVPKSLSDALSHAGWRQAMEEEMLALEHNATWDLVPLPAGKQVVGCKWVYTTKVNPD 920
+ P S +A+ +QAM+EE+ AL TWDLVPLP GK VVGC+WVY K N D
Sbjct: 870 HCLFEPSSYKEAILDPLGQQAMDEELSALHKTDTWDLVPLPPGKSVVGCRWVYKIKTNSD 929
Query: 921 GSLARLKARLVAKGYAQTYGVDYTDTFSPVAKLSSVRILISLAATNHWPLFQLDVKNAFL 980
GS+ R KARLVAKGY+Q YG+DY +TF+P+AK++++R LI++A+ W + QLDVKNAFL
Sbjct: 930 GSIERYKARLVAKGYSQQYGMDYEETFAPIAKMTTIRTLIAVASIRQWHISQLDVKNAFL 989
Query: 981 HGDLQDEVYMEQPPGFVAQGECGKVCRLKKSLYGLKQSPRSWFGRFSDVVMEFGLRRSES 1040
+GDLQ+EVYM PPG + G VC+LKK+LYGLKQ+PR+WF +FS V+ G S
Sbjct: 990 NGDLQEEVYMAPPPGI--SHDSGYVCKLKKALYGLKQAPRAWFEKFSIVISSLGFVSSSH 1047
Query: 1041 DHTVFFKQTNKGCILLVVYVDDIVITGSDSEGIGNLKTFLQMKFQTKDLGILKYFLGIEV 1100
D +F K T+ G I+L +YVDD++ITG D +GI LKT L +F+ KDLG L+YFLGIEV
Sbjct: 1048 DSALFIKCTDAGRIILSLYVDDMIITGDDIDGISVLKTELARRFEMKDLGYLRYFLGIEV 1107
Query: 1101 VYSKNGIMISQRKYVLDMLAETGLMGSKPCETPMEPGMKL-TAEGVPFSDPQQYRRLVGK 1159
YS G ++SQ KYV ++L L +K +TP+E + +++G+P DP YR +VG
Sbjct: 1108 AYSPRGYLLSQSKYVANILERARLTDNKTVDTPIEVNARYSSSDGLPLIDPTLYRTIVGS 1167
Query: 1160 LNYLTVTRPDIAFPVSVVSQFMSSPTDAHWEALIRIVKYLKKAPGRGIVYRDHGHMRVEA 1219
L YLT+T PDIA+ V VVSQF++SPT HW A++RI++YL+ + ++ + + A
Sbjct: 1168 LVYLTITHPDIAYAVHVVSQFVASPTTIHWAAVLRILRYLRGTVFQSLLLSSTSSLELRA 1227
Query: 1220 FSDADWAGSPMDRKSTTGYCVFLGGNLISWKSKKQNVVARSSAEAEYRAMAQTT--CMWV 1277
+SDAD P DRKS TG+C+FLG +LISWKSKKQ++V++SS EAEY AMA TT +W
Sbjct: 1228 YSDADHGSDPTDRKSVTGFCIFLGDSLISWKSKKQSIVSQSSTEAEYCAMASTTKEIVWS 1287
Query: 1278 GQILSEMGIERISPMKLWCDNQAALHISSNPVFHERTKHIEVDCHFIREKLQQNLISTSY 1337
+L++MGI ++CDNQ+++ I+ N VFHERTKHIE+DCH R L+ I+ +
Sbjct: 1288 RWLLADMGISFSHLTPMYCDNQSSIQIAHNSVFHERTKHIEIDCHLTRHHLKHGTIALPF 1347
Query: 1338 VRTGDQLADVFTKALNGVRNDFICNKLGMI 1367
V + Q+AD FTKA + R F+ KL M+
Sbjct: 1348 VPSSLQIADFFTKAHSISRFCFLVGKLSML 1377
>UniRef100_Q9XII7 Putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1454
Score = 804 bits (2076), Expect = 0.0
Identities = 488/1409 (34%), Positives = 755/1409 (52%), Gaps = 89/1409 (6%)
Query: 15 DGENYVEWKYLVAVSLGGMGKDEHLTG--SCPTNATAAAK-WKMDDKRILALLVNSVDKR 71
D NY +W + +SL K + G S P + + W + + + L+NSV +
Sbjct: 80 DETNYGDWSVAMLISLDAKNKTGFIDGTLSRPLESDLNFRLWSRCNSMVKSWLLNSVSPQ 139
Query: 72 TQSVITHCQTVKELWEFLQFIFGKADNLNRIYALLQ*IFRPKQDKRKLMDYFLEFKKYAE 131
I ++W L F NL R Y L Q I +Q L +Y+ K +
Sbjct: 140 IYRSILRMNDASDIWRDLNSRFN-VTNLPRTYNLTQEIQDFRQGTLSLSEYYTRLKTLWD 198
Query: 132 ELTSLLS----CKTKEDMLAQQKKLIA--LSWLSGLDQEFEVVRSQILSSKQVDTLTDVF 185
+L S + C + M QQK A + +L+GL++ + +VR QI++ K + +L +V+
Sbjct: 199 QLDSTEALDEPCTCGKAMRLQQKAEQAKIVKFLAGLNESYAIVRRQIIAKKALPSLGEVY 258
Query: 186 SRVMQSSFEKPKPAPDVDTSDRSALAAHSGFRGG---RGGGRGGRGGARGRGGRFGQIQC 242
+ Q + ++ S + +A + F+ + G G+ C
Sbjct: 259 HILDQDNSQQ---------SFSNVVAPPAAFQVSEITQSPSMDPTVCYVQNGPNKGRPIC 309
Query: 243 YSCGELGHYKN*CPNSQQHQQHFQQSA--------PNRFANNVSQSDVIQTQPEKRTVVM 294
+GH C F P A NV++S + T E +
Sbjct: 310 SFYNRVGHIAERCYKKHGFPPGFTPKGKAGEKLQKPKPLAANVAESSEVNTSLESMVGNL 369
Query: 295 SDDEFARYTQFQISQQSASPSSS--TATFVQTGNPTVCLSST----------------SR 336
S ++ ++ SQ +P S+ TA+ Q+ N +C S + S
Sbjct: 370 SKEQLQQFIAMFSSQLQNTPPSTYATASTSQSDNLGICFSPSTYSFIGILTVARHTLSSA 429
Query: 337 RWIIDSGATNHMTGDSGIFLSFSSSSIHSSVTLADGSIVRVKGSGCTTPVSTLPMSSVLY 396
W+IDSGAT+H++ D +F S +S + S+V L G V++ G G + + +VL+
Sbjct: 430 TWVIDSGATHHVSHDRSLFSSLDTSVL-SAVNLPTGPTVKISGVGTLKLNDDILLKNVLF 488
Query: 397 LPQFPCNLLSISKITRSLKCSVTFFPDSCVFQDLSTQRIIGRGRESDGLYLLDEGVSKAS 456
+P+F NL+SIS +T + V F +SC QDL R++G+GR LYLLD G S
Sbjct: 489 IPEFRLNLISISSLTDDIGSRVIFDKNSCEIQDLIKGRMLGQGRRVANLYLLDVGDQSIS 548
Query: 457 TAYRTSSVSPFQLHCRLGHPSLGVLRKLCPQLESLSNFS-----CESCQFAKHHRSVYLP 511
+ V H RLGH SL L + L + + + C C AK R + P
Sbjct: 549 V---NAVVDISMWHRRLGHASLQRLDAISDSLGTTRHKNKGSDFCHVCHLAKQ-RKLSFP 604
Query: 512 RLNKRAMSLFHIVHSDVWGPCPVTSKLGYKYFVTFVDDYSRATWLYLMKSRSELFTIFCN 571
NK +F ++H DVWGP V + GYKYF+T VDD+SRATW+YL+K++SE+ T+F
Sbjct: 605 TSNKVCKEIFDLLHIDVWGPFSVETVEGYKYFLTIVDDHSRATWMYLLKTKSEVLTVFPA 664
Query: 572 FCAEIRTQFNCPIHILRSDNAKEYFSAPFRTFMDKHGMIHQSSCIVTPQQNGVAERKNRH 631
F ++ Q+ + +RSDNA E F +F + G++ SC TP+QN V ERK++H
Sbjct: 665 FIQQVENQYKVKVKAVRSDNAPEL---KFTSFYAEKGIVSFHSCPETPEQNSVVERKHQH 721
Query: 632 LMEVAQALMFQMKVPKCFWADAVLTAAYLINRMPSTVLNGVIPYSVLFPSCSLFPLPPKV 691
++ VA+ALMFQ +VP W D VLTA +LINR PS +L PY +L + ++ +
Sbjct: 722 ILNVARALMFQSQVPLSLWGDCVLTAVFLINRTPSQLLMNKTPYEILTGTAPVYE-QLRT 780
Query: 692 FGCTCFVLDVRPQVTKLDPKSLKCVFLGYSRTQKGYRCFSPALGRYLVSADVTFFEDCSF 751
FGC C+ Q K P+S C+FLGY KGY+ +S +V F E+
Sbjct: 781 FGCLCYSSTSPKQRHKFQPRSRACLFLGYPSGYKGYKLMDLESNTVFISRNVQFHEEV-- 838
Query: 752 SGWLPSSFPVCESEDTFLTYITTSPAPQTTTGTGFQFYEKTYSRRPKSSAPPPD--TQSL 809
FP+ ++ + + +P ++G S + S PP +Q +
Sbjct: 839 -------FPLAKNPGSESSLKLFTPMVPVSSGIISDTTHSPSSLPSQISDLPPQISSQRV 891
Query: 810 PSIPLVSSDPHDNLDLPIALRKGKRTCSYPISSYVTSNKLSPASKSFVAALDSVSVPKSL 869
P +D H N + YPISS ++ +K+SP+ ++ + + +P +
Sbjct: 892 RKPPAHLNDYHCNTM--------QSDHKYPISSTISYSKISPSHMCYINNITKIPIPTNY 943
Query: 870 SDALSHAGWRQAMEEEMLALEHNATWDLVPLPAGKQVVGCKWVYTTKVNPDGSLARLKAR 929
++A W +A++ E+ A+E TW++ LP GK+ VGCKWV+T K DG+L R KAR
Sbjct: 944 AEAQDTKEWCEAVDAEIGAMEKTNTWEITTLPKGKKAVGCKWVFTLKFLADGNLERYKAR 1003
Query: 930 LVAKGYAQTYGVDYTDTFSPVAKLSSVRILISLAATNHWPLFQLDVKNAFLHGDLQDEVY 989
LVAKGY Q G+DYTDTFSPVAK++++++L+ ++A+ W L QLDV NAFL+G+L++E++
Sbjct: 1004 LVAKGYTQKEGLDYTDTFSPVAKMTTIKLLLKVSASKKWFLKQLDVSNAFLNGELEEEIF 1063
Query: 990 MEQPPGFVAQG----ECGKVCRLKKSLYGLKQSPRSWFGRFSDVVMEFGLRRSESDHTVF 1045
M+ P G+ + V RLK+S+YGLKQ+ R WF +FS ++ G +++ DHT+F
Sbjct: 1064 MKIPEGYAERKGIVLPSNVVLRLKRSIYGLKQASRQWFKKFSSSLLSLGFKKTHGDHTLF 1123
Query: 1046 FKQTNKGCILLVVYVDDIVITGSDSEGIGNLKTFLQMKFQTKDLGILKYFLGIEVVYSKN 1105
K + ++++VYVDDIVI + L L +F+ +DLG LKYFLG+EV +
Sbjct: 1124 LKMYDGEFVIVLVYVDDIVIASTSEAAAAQLTEELDQRFKLRDLGDLKYFLGLEVARTTA 1183
Query: 1106 GIMISQRKYVLDMLAETGLMGSKPCETPMEPGMKLTA-EGVPFSDPQQYRRLVGKLNYLT 1164
GI I QRKY L++L TG++ KP PM P +K+ +G D +QYRR+VGKL YLT
Sbjct: 1184 GISICQRKYALELLQSTGMLACKPVSVPMIPNLKMRKDDGDLIEDIEQYRRIVGKLMYLT 1243
Query: 1165 VTRPDIAFPVSVVSQFMSSPTDAHWEALIRIVKYLKKAPGRGIVYRDHGHMRVEAFSDAD 1224
+TRPDI F V+ + QF S+P H A R+++Y+K G+G+ Y + ++ F+D+D
Sbjct: 1244 ITRPDITFAVNKLCQFSSAPRTTHLTAAYRVLQYIKGTVGQGLFYSASSDLTLKGFADSD 1303
Query: 1225 WAGSPMDRKSTTGYCVFLGGNLISWKSKKQNVVARSSAEAEYRAMAQTTC--MWVGQILS 1282
WA R+STT + +F+G +LISW+SKKQ+ V+RSSAEAEYRA+A TC +W+ +L
Sbjct: 1304 WASCQDSRRSTTSFTMFVGDSLISWRSKKQHTVSRSSAEAEYRALALATCEMVWLFTLLV 1363
Query: 1283 EMGIERISPMKLWCDNQAALHISSNPVFHERTKHIEVDCHFIREKLQQNLISTSYVRTGD 1342
+ P+ L+ D+ AA++I++NPVFHERTKHI++DCH +RE+L + +VRT D
Sbjct: 1364 SLQASPPVPI-LYSDSTAAIYIATNPVFHERTKHIKLDCHTVRERLDNGELKLLHVRTED 1422
Query: 1343 QLADVFTKALNGVRNDFICNKLGMINIYA 1371
Q+AD+ TK L + + + +K+ ++NI++
Sbjct: 1423 QVADILTKPLFPYQFEHLKSKMSILNIFS 1451
>UniRef100_Q9SIM3 Putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1461
Score = 780 bits (2014), Expect = 0.0
Identities = 494/1421 (34%), Positives = 743/1421 (51%), Gaps = 112/1421 (7%)
Query: 15 DGENYVEWKYLVAVSLGGMGKDEHLTGSCPTNATAAAK---WKMDDKRILALLVNSVDKR 71
D Y +W + +SL K + GS P + W + + + L+NSV +
Sbjct: 84 DETTYGDWSVAMRISLDAKNKLGFVDGSLPRPLESDPNFRLWSRCNSMVKSWLLNSVSPQ 143
Query: 72 TQSVITHCQTVKELWEFLQFIFGKADNLNRIYALLQ*IFRPKQDKRKLMDYFLEFKKYAE 131
I ++W L F NL R Y L Q I +Q L +Y+ K +
Sbjct: 144 IYRSILRLNDATDIWRDLFDRFNLT-NLPRTYNLTQEIQDLRQGTMSLSEYYTLLKTLWD 202
Query: 132 ELTSL------LSCKTKEDMLAQQKKLIALSWLSGLDQEFEVVRSQILSSKQVDTLTDVF 185
+L S +C + + +K + +L+GL++ + +VR QI++ K + +L +V+
Sbjct: 203 QLDSTEALDDPCTCGKAVRLYQKAEKAKIMKFLAGLNESYAIVRRQIIAKKALPSLAEVY 262
Query: 186 SRVMQSSFEK-------PKPAPDVDTSDRSALAAHSGFRGGRGGGRGGRGGARGRGGRFG 238
+ Q + +K P A V S + + G + G
Sbjct: 263 HILDQDNSQKGFFNVVAPPAAFQVSEVSHSPITSPEIMYVQSGPNK-------------G 309
Query: 239 QIQCYSCGELGHYKN*CPNSQQHQQHF--------QQSAPNRFANNVSQS-DVIQTQPEK 289
+ C C +GH C F + P A V+ S D + Q E
Sbjct: 310 RPTCSFCNRVGHIAERCYKKHGFPPGFTPKGKSSDKPPKPQAVAAQVTLSPDKMTGQLET 369
Query: 290 RTVVMSDDE-------FARYTQFQI-------SQQSASPSSSTATFVQTGNP-TVCL--- 331
S D+ F+ Q QI SQ AS S S A +P T C
Sbjct: 370 LAGNFSPDQIQNLIALFSSQLQPQIVSPQTASSQHEASSSQSVAPSGILFSPSTYCFIGI 429
Query: 332 ------SSTSRRWIIDSGATNHMTGDSGIFLSFSSSSIHSSVTLADGSIVRVKGSGCTTP 385
S +S W+IDSGAT+H++ D +F + +SI S V L G VR+ G G
Sbjct: 430 LAVSHNSLSSDTWVIDSGATHHVSHDRKLFQTL-DTSIVSFVNLPTGPNVRISGVGTVLI 488
Query: 386 VSTLPMSSVLYLPQFPCNLLSISKITRSLKCSVTFFPDSCVFQDLSTQRIIGRGRESDGL 445
+ + +VL++P+F NL+SIS +T L V F P C QDL+ +G G+ L
Sbjct: 489 NKDIILQNVLFIPEFRLNLISISSLTTDLGTRVIFDPSCCQIQDLTKGLTLGEGKRIGNL 548
Query: 446 YLLDEGVSKASTAYRTSSVSPFQLHCRLGHPSLGVLRKLCPQL-----ESLSNFSCESCQ 500
Y+LD S A + VS + H RLGHPS L L L ++ + C C
Sbjct: 549 YVLDT-QSPAISVNAVVDVSVW--HKRLGHPSFSRLDSLSEVLGTTRHKNKKSAYCHVCH 605
Query: 501 FAKHHRSVYLPRLNKRAMSLFHIVHSDVWGPCPVTSKLGYKYFVTFVDDYSRATWLYLMK 560
AK + + P N S F ++H DVWGP V + GYKYF+T VDD+SRATW+YL+K
Sbjct: 606 LAK-QKKLSFPSANNICNSTFELLHIDVWGPFSVETVEGYKYFLTIVDDHSRATWIYLLK 664
Query: 561 SRSELFTIFCNFCAEIRTQFNCPIHILRSDNAKEYFSAPFRTFMDKHGMIHQSSCIVTPQ 620
S+S++ T+F F + Q++ + +RSDNAKE F F G++ SC TP+
Sbjct: 665 SKSDVLTVFPAFIDLVENQYDTRVKSVRSDNAKE---LAFTEFYKAKGIVSFHSCPETPE 721
Query: 621 QNGVAERKNRHLMEVAQALMFQMKVPKCFWADAVLTAAYLINRMPSTVLNGVIPYSVL-- 678
QN V ERK++H++ VA+ALMFQ + +W D VLTA +LINR PS +L+ P+ VL
Sbjct: 722 QNSVVERKHQHILNVARALMFQSNMSLPYWGDCVLTAVFLINRTPSALLSNKTPFEVLTG 781
Query: 679 -FPSCSLFPLPPKVFGCTCFVLDVRPQVTKLDPKSLKCVFLGYSRTQKGYRCFSPALGRY 737
P S K FGC C+ Q K P+S CVFLGY KGY+
Sbjct: 782 KLPDYSQL----KTFGCLCYSSTSSKQRHKFLPRSRACVFLGYPFGFKGYKLLDLESNVV 837
Query: 738 LVSADVTFFEDCSFSGWLPSSFPVCESEDTFLTYITT-SPAPQTTTGTGFQFYEKTYSRR 796
+S +V F E+ FP+ S+ + T +P ++G + +
Sbjct: 838 HISRNVEFHEEL---------FPLASSQQSATTASDVFTPMDPLSSGNSITSHLPSPQIS 888
Query: 797 PKSSAPPPDTQSLPSIPLVSSDPHDNLDLPIALRKGKRTCSYPISSYVTSNKLSPASKSF 856
P + + + P D H + S+PISS ++ +++SP+ +
Sbjct: 889 PSTQI---SKRRITKFPAHLQDYHCYF--------VNKDDSHPISSSLSYSQISPSHMLY 937
Query: 857 VAALDSVSVPKSLSDALSHAGWRQAMEEEMLALEHNATWDLVPLPAGKQVVGCKWVYTTK 916
+ + + +P+S +A W A+++E+ A+E TW++ LP GK+ VGCKWV+T K
Sbjct: 938 INNISKIPIPQSYHEAKDSKEWCGAIDQEIGAMERTDTWEITSLPPGKKAVGCKWVFTVK 997
Query: 917 VNPDGSLARLKARLVAKGYAQTYGVDYTDTFSPVAKLSSVRILISLAATNHWPLFQLDVK 976
+ DGSL R KAR+VAKGY Q G+DYT+TFSPVAK+++V++L+ ++A+ W L QLD+
Sbjct: 998 FHADGSLERFKARIVAKGYTQKEGLDYTETFSPVAKMATVKLLLKVSASKKWYLNQLDIS 1057
Query: 977 NAFLHGDLQDEVYMEQPPGFV-AQGEC---GKVCRLKKSLYGLKQSPRSWFGRFSDVVME 1032
NAFL+GDL++ +YM+ P G+ +G VCRLKKS+YGLKQ+ R WF +FS+ ++
Sbjct: 1058 NAFLNGDLEETIYMKLPDGYADIKGTSLPPNVVCRLKKSIYGLKQASRQWFLKFSNSLLA 1117
Query: 1033 FGLRRSESDHTVFFKQTNKGCILLVVYVDDIVITGSDSEGIGNLKTFLQMKFQTKDLGIL 1092
G + DHT+F + I+L+VYVDDIVI + + +L L+ F+ ++LG L
Sbjct: 1118 LGFEKQHGDHTLFVRCIGSEFIVLLVYVDDIVIASTTEQAAQSLTEALKASFKLRELGPL 1177
Query: 1093 KYFLGIEVVYSKNGIMISQRKYVLDMLAETGLMGSKPCETPMEPGMKLTA-EGVPFSDPQ 1151
KYFLG+EV + GI +SQRKY L++L ++ KP PM P ++L+ +G+ D +
Sbjct: 1178 KYFLGLEVARTSEGISLSQRKYALELLTSADMLDCKPSSIPMTPNIRLSKNDGLLLEDKE 1237
Query: 1152 QYRRLVGKLNYLTVTRPDIAFPVSVVSQFMSSPTDAHWEALIRIVKYLKKAPGRGIVYRD 1211
YRRLVGKL YLT+TRPDI F V+ + QF S+P AH A+ ++++Y+K G+G+ Y
Sbjct: 1238 MYRRLVGKLMYLTITRPDITFAVNKLCQFSSAPRTAHLAAVYKVLQYIKGTVGQGLFYSA 1297
Query: 1212 HGHMRVEAFSDADWAGSPMDRKSTTGYCVFLGGNLISWKSKKQNVVARSSAEAEYRAMAQ 1271
+ ++ ++DADW P R+STTG+ +F+G +LISW+SKKQ V+RSSAEAEYRA+A
Sbjct: 1298 EDDLTLKGYTDADWGTCPDSRRSTTGFTMFVGSSLISWRSKKQPTVSRSSAEAEYRALAL 1357
Query: 1272 TTC--MWVGQILSEMGIERISPMKLWCDNQAALHISSNPVFHERTKHIEVDCHFIREKLQ 1329
+C W+ +L + + P+ L+ D+ AA++I++NPVFHERTKHIE+DCH +REKL
Sbjct: 1358 ASCEMAWLSTLLLALRVHSGVPI-LYSDSTAAVYIATNPVFHERTKHIEIDCHTVREKLD 1416
Query: 1330 QNLISTSYVRTGDQLADVFTKALNGVRNDFICNKLGMINIY 1370
+ +V+T DQ+AD+ TK L + + +K+ + NI+
Sbjct: 1417 NGQLKLLHVKTKDQVADILTKPLFPYQFAHLLSKMSIQNIF 1457
>UniRef100_O81617 F8M12.17 protein [Arabidopsis thaliana]
Length = 1633
Score = 770 bits (1988), Expect = 0.0
Identities = 500/1457 (34%), Positives = 746/1457 (50%), Gaps = 217/1457 (14%)
Query: 18 NYVEWKYLVAVSLGGMGKDEHLTGSC---PTNATAAAKWKMDDKRILALLVNSVDKRTQS 74
++ W+ + ++L K + G+ P + W + + L+NSV K+
Sbjct: 57 DFHSWRRSIWMALNVRNKLGFIDGTIVKPPLDHRDYGAWSRCNDTVSTWLMNSVSKKIGQ 116
Query: 75 VITHCQTVKELWEFLQFIFGKADNLNRIYALLQ*IFRPKQDKRKLMDYFLEFKKYAEELT 134
+ T + +W+ + F K D+ R+Y + Q + + +Q + Y+ E + EE
Sbjct: 117 SLLFIPTAEGIWKNMLSRF-KQDDAPRVYDIEQRLSKIEQGSMDISAYYTELQTLWEEHK 175
Query: 135 SLLS----------CKTKEDMLAQQKKLIALSWLSGLDQEFEVVRSQILSSKQVDTLTDV 184
+ + C Q++ +L GL++ +E R IL K + T+ +
Sbjct: 176 NYVDLPVCTCGRCECDAAVKWERLQQRSHVTKFLMGLNESYEQTRRHILMLKPIRTIEEA 235
Query: 185 FSRVMQSSFEKP-KPAPDVDTSDRSALAAHSGFRGGRGGGRGGRGGARGRGGRFGQIQCY 243
F+ V Q +K +P P VD D+ L C
Sbjct: 236 FNIVTQDERQKAIRPTPKVDNQDQLKLPL-----------------------------CT 266
Query: 244 SCGELGH--------------------YKN*CPNSQQHQQHFQQSAPNR---FANNVSQS 280
+CG++GH Y+ +Q Q QQS P + +SQ
Sbjct: 267 NCGKVGHTVQKCYKIIGYPPGYKAATSYRQPQIQTQPRMQMPQQSQPRMQQPIQHLISQF 326
Query: 281 DV-IQTQPEKRTVVMSDDEFARYTQFQISQQSAS----PSSSTATFVQTGNPTV---CLS 332
+ ++ Q T + + A T+ + Q+++ P ST+ + N T LS
Sbjct: 327 NAQVRVQEPAATSIYTSSPTATITEHGLMAQTSTSGTIPFPSTSLKYENNNLTFQNHTLS 386
Query: 333 S-----TSRRWIIDSGATNHMTGDSGIFLSFSSSSIHSS---VTLADGSIVRVKGSGCTT 384
S +S WIIDSGA++H+ D +F IH S VTL +G+ V + +G
Sbjct: 387 SLQNVLSSDAWIIDSGASSHVCSDLTMFREL----IHVSGVTVTLPNGTRVAITHTGTIC 442
Query: 385 PVSTLPMSSVLYLPQFPCNLLSIS--KITRSLKCSVTFFPDSCVFQDLSTQRIIGRGRES 442
STL + +VL +P F NL+S+ ++TR L +IGRG+
Sbjct: 443 ITSTLILHNVLLVPDFKFNLISVCCLELTRGL--------------------MIGRGKTY 482
Query: 443 DGLYLLDEGVSKASTAYRTSSVSPFQLHCRLGHPSLGVLRKLCPQLESLSNFS-----CE 497
+ LY+L+ + +S SP HPSL L+KL + SL + S C
Sbjct: 483 NNLYILET---------QRTSFSPSLPAATSRHPSLPALQKLVSSIPSLKSVSSTASHCR 533
Query: 498 SCQFAKHHRSVYLPRLNKRAMSLFHIVHSDVWGPCPVTSKLGYKYFVTFVDDYSRATWLY 557
AK R Y+ N A S F ++H D+WGP + S G++YF+T VDD +R TW+Y
Sbjct: 534 ISPLAKQKRLAYVSH-NNLASSPFDLIHLDIWGPFSIESVDGFRYFLTLVDDCTRTTWVY 592
Query: 558 LMKSRSELFTIFCNFCAEIRTQFNCPIHILRSDNAKEYFSAPFRTFMDKHGMIHQSSCIV 617
+MK++SE+ IF F I TQ+N I +RSDN KE F F+ + GMIHQ SC
Sbjct: 593 MMKNKSEVSNIFPVFVKLIFTQYNAKIKAIRSDNVKEL---AFTKFVKEQGMIHQFSCAY 649
Query: 618 TPQQNGVAERKNRHLMEVAQALMFQMKVPKCFWADAVLTAAYLINRMPSTVLNGVIPYSV 677
TPQQN V ERK++HL+ +A++L+FQ VP +W+D VLTAAYLINR+PS +L+ P+ +
Sbjct: 650 TPQQNSVVERKHQHLLNIARSLLFQSNVPLQYWSDCVLTAAYLINRLPSPLLDNKTPFEL 709
Query: 678 LFPSCSLFPLPPKVFGCTCFVLDVRPQVTKLDPKSLKCVFLGYSRTQKGYRCFSPALGRY 737
L + L + C C+ K P++ CVFLGY KGY+
Sbjct: 710 LLKKIPDYTL---LKSCLCYASTNVHDRNKFSPRARPCVFLGYPSGYKGYKVLDLESHSI 766
Query: 738 LVSADVTFFEDCSFSGWLPSSFPVCESEDTFLTYITTSPAPQTTTGTGFQFYE------- 790
++ +V F E + + S F + ES D F I PAP F E
Sbjct: 767 SITRNVVFHE--TKFPFKTSKF-LKESVDMFPNSILPLPAP-------LHFVESMPLDDD 816
Query: 791 --------KTYSRRPKSSAPPP---------------DTQSLP----------------- 810
T + +S+ PP DT S+P
Sbjct: 817 LRADDNNASTSNSASSASSIPPLPSTVNTQNTDALDIDTNSVPIARPKRNAKAPAYLSEY 876
Query: 811 ---SIPLVSS---DPHDNLDLP-IALRKGKRTCSYPISSYVTSNKLSPASKSFVAALDSV 863
S+P +SS +++ P ++ K T YP+S+ ++ +KL+P S++ A +
Sbjct: 877 HCNSVPFLSSLSPTTSTSIETPSSSIPPKKITTPYPMSTAISYDKLTPLFHSYICAYNVE 936
Query: 864 SVPKSLSDALSHAGWRQAMEEEMLALEHNATWDLVPLPAGKQVVGCKWVYTTKVNPDGSL 923
+ PK+ + A+ W +A EE+ ALE N TW + L GK VVGCKWV+T K NPDGS+
Sbjct: 937 TEPKAFTQAMKSEKWTRAANEELHALEQNKTWIVESLTEGKNVVGCKWVFTIKYNPDGSI 996
Query: 924 ARLKARLVAKGYAQTYGVDYTDTFSPVAKLSSVRILISLAATNHWPLFQLDVKNAFLHGD 983
R KARLVA+G+ Q G+DY +TFSPVAK SV++L+ LAA W L Q+DV NAFLHG+
Sbjct: 997 ERYKARLVAQGFTQQEGIDYMETFSPVAKFGSVKLLLGLAAATGWSLTQMDVSNAFLHGE 1056
Query: 984 LQDEVYMEQPPGFVAQGECG----KVCRLKKSLYGLKQSPRSWFGRFSDVVMEFGLRRSE 1039
L +E+YM P G+ VCRL KSLYGLKQ+ R W+ R S V + +S
Sbjct: 1057 LDEEIYMSLPQGYTPPTGISLPSKPVCRLLKSLYGLKQASRQWYKRLSSVFLGANFIQSP 1116
Query: 1040 SDHTVFFKQTNKGCILLVVYVDDIVITGSDSEGIGNLKTFLQMKFQTKDLGILKYFLGIE 1099
+D+T+F K + I+++VYVDD++I +DS + NLK L+ +F+ KDLG ++FLG+E
Sbjct: 1117 ADNTMFVKVSCTSIIVVLVYVDDLMIASNDSSAVENLKELLRSEFKIKDLGPARFFLGLE 1176
Query: 1100 VVYSKNGIMISQRKYVLDMLAETGLMGSKPCETPMEPGMKLTAE-GVPFSDPQQYRRLVG 1158
+ S GI + QRKY ++L + GL G KP PM+P + LT E G + YR LVG
Sbjct: 1177 IARSSEGISVCQRKYAQNLLEDVGLSGCKPSSIPMDPNLHLTKEMGTLLPNATSYRELVG 1236
Query: 1159 KLNYLTVTRPDIAFPVSVVSQFMSSPTDAHWEALIRIVKYLKKAPGRGIVYRDHGHMRVE 1218
+L YL +TRPDI F V +SQF+S+PTD H +A ++++YLK PG+
Sbjct: 1237 RLLYLCITRPDITFAVHTLSQFLSAPTDIHMQAAHKVLRYLKGNPGQ------------- 1283
Query: 1219 AFSDADWAGSPMDRKSTTGYCVFLGGNLISWKSKKQNVVARSSAEAEYRAMAQTTC--MW 1276
DADW R+S TG+C++LG +LI+WKSKKQ+VV+RSS E+EYR++AQ TC +W
Sbjct: 1284 ---DADWGTCKDSRRSVTGFCIYLGTSLITWKSKKQSVVSRSSTESEYRSLAQATCEIIW 1340
Query: 1277 VGQILSEMGIERISPMKLWCDNQAALHISSNPVFHERTKHIEVDCHFIREKLQQNLISTS 1336
+ Q+L ++ + P KL+CDN++ALH+++NPVFHERTKHIE+DCH +R++++ + T
Sbjct: 1341 LQQLLKDLHVTMTCPAKLFCDNKSALHLATNPVFHERTKHIEIDCHTVRDQIKAGKLKTL 1400
Query: 1337 YVRTGDQLADVFTKALN 1353
+V TG+QLAD+ TK L+
Sbjct: 1401 HVPTGNQLADILTKPLH 1417
>UniRef100_Q5XWR5 Putative retroelement pol polyprotein-like [Solanum tuberosum]
Length = 1476
Score = 760 bits (1962), Expect = 0.0
Identities = 501/1477 (33%), Positives = 742/1477 (49%), Gaps = 169/1477 (11%)
Query: 17 ENYVEWKYLVAVSLGGMGKDEHLTGSCPTN----ATAAAKWKMDDKRILALLVNSVDKRT 72
ENY W + ++L K + GS + +W + +L+ L+N+V
Sbjct: 25 ENYSLWSRAMQLTLLTKNKMGFIDGSLRRDDFKEELEKKQWDRCNAMVLSWLMNNVSTDL 84
Query: 73 QSVITHCQTVKELWEFLQFIFGKADNLNRIYALLQ*IFRPKQDKRKLMDYFLEFKKYAEE 132
S I +W L+ F K N++RI+ L + I Q + Y+ + K +E
Sbjct: 85 VSGILFRSNATLVWNDLKERFDKV-NMSRIFHLHKAIVTHVQGVSPVSVYYSKLKDLWDE 143
Query: 133 LTSLL-----SCKTKEDMLAQQKKLIALSWLSGLDQEFEVVRSQILSSKQVDTLTDVFSR 187
S+L C+ D + L +L GL+ + RSQIL ++ ++
Sbjct: 144 YDSILPPPSCDCEKSVDYTDSMLRQKLLQFLMGLNDNYGQARSQILMMNPSPSVNQCYAM 203
Query: 188 VMQSSFEKPKPAPDVDTSDRSALAAH----SGFRGGRGGGRGGRGGARGRGGRF------ 237
++Q ++ T D +AL H SGF G +G G G + G RF
Sbjct: 204 IVQDESQRSLSGSG-QTIDPTALFTHRPGGSGF-GSQGSQGSGNGSSNGNSHRFHKGGNI 261
Query: 238 --------GQIQ--------CYSCGELGHYKN*CPNSQQHQQHFQ--------------Q 267
G I+ C C GH K+ C + ++ Q
Sbjct: 262 YCDFCNMKGHIRANCNKLKHCTHCNMQGHTKDTCYQLIGYPADYKGKKKANIVTAPSLPQ 321
Query: 268 SAPNRFANNVSQSDVIQTQPEKRTVVMSDDEFARYT------------------QFQISQ 309
N F NN++ +Q + +S +F T QF SQ
Sbjct: 322 MQHNNFNNNLNYP--MQYTGDGIGHFVSPMQFTGNTNGHSSGSIAGNFGPGSVPQFTPSQ 379
Query: 310 QS----------ASPSSSTATFVQTGNPTVCLSSTSRRWIIDSGATNHMTGDSGIFLSFS 359
+ S SS+ + G+ ++ S WI+DSGAT+HM ++ +
Sbjct: 380 YNNILQMLNKPMLSESSANVAGIFAGSSHCNSNTHSSAWIVDSGATDHMVSNTTLLNHGL 439
Query: 360 SSSIHSSVTLADGSIVRVKGSGCTTPVSTLPMSSVLYLPQFPCNLLSISKITRSLKCSVT 419
S S V L G V SG + + +VL +P F NLLS+SK+T+ L C V
Sbjct: 440 SVSHPGKVQLPTGDSAVVTHSGSSQLTGGDVVKNVLCVPTFQFNLLSVSKLTKELNCCVI 499
Query: 420 FFPDSCVFQDLSTQRIIGRGRESDGLYLL----DEGVSKASTAYRTSSVSPFQLHCRLGH 475
FFPD + QDL T ++ G E +GLY+ SK + A H RLGH
Sbjct: 500 FFPDFFIIQDLFTGKVKEIGEEINGLYITRPHQHHDTSKKTLAAIKGCEEAEMWHKRLGH 559
Query: 476 PSLGVLRKL----CPQLESLSNFSCESCQFAKHHRSVYLPRLNKRAMSLFHIVHSDVWGP 531
+ VLRK+ PQ L SC+ C A+ R + P R+ + F ++H DVWGP
Sbjct: 560 IPMSVLRKIKMFDSPQKLVLP--SCDVCPLARQVRLPF-PISQSRSENCFDLIHLDVWGP 616
Query: 532 CPVTSKLGYKYFVTFVDDYSRATWLYLMKSRSELFTIFCNFCAEIRTQFNCPIHILRSDN 591
+ +YF+T VDD+SR TW++LM +S++ T+ NF I TQF I I RSDN
Sbjct: 617 YKAATHNKMRYFLTVVDDHSRWTWIFLMHLKSDVSTVLQNFILMIDTQFGQKIKIFRSDN 676
Query: 592 AKEYFSAPFRTFMDKHGMIHQSSCIVTPQQNGVAERKNRHLMEVAQALMFQMKVPKCFWA 651
E+F+A HG++HQSSC TPQQNGV ER+++H++E A+AL FQ +P FW
Sbjct: 677 GTEFFNAQCDGLFKSHGIVHQSSCPHTPQQNGVVERRHKHILETARALRFQGHLPIRFWG 736
Query: 652 DAVLTAAYLINRMPSTVLNGVIPYSVLF---PSCSLFPLPPKVFGCTCFVLDVRPQVTKL 708
+ VL+A ++INR+PS+VL+ P+ +++ P S +V GC C +
Sbjct: 737 ECVLSAVHIINRIPSSVLHNKSPFELMYKRSPDLSYM----RVIGCLCHATN-------- 784
Query: 709 DPKSLKCVFLGYSRTQKGYRCFSPALGRYLVSADVTFFEDCSFSGWLPSSFPVCESEDTF 768
L + TQKGY+ + + VS D+ F E P P
Sbjct: 785 ---------LVNTSTQKGYKLYDLEHQHFFVSRDMVFNE-----AVFPFQSPALADPHDT 830
Query: 769 LTYITTSPAPQTTTGTGFQFYEKTYSRRPKSSAPPPDTQSLPSIPLVSSDPHDNLDLPIA 828
++ + P T S A PP S D+L P
Sbjct: 831 PVFLASPPCSSHTEDADAVQPAIITSEEIIPVASPPSAVS-----------DDHLHPPPE 879
Query: 829 LRKGKRT--------------------CSYPISSYVTSNKLSPASKSFVAALDSVSVPKS 868
R+ RT C YPIS + + LS + ++A+ + P+
Sbjct: 880 RRRSYRTGKPPIWQKDFITTSTSRSNHCLYPISDNIDYSCLSSTYQCYIASSSVETEPQF 939
Query: 869 LSDALSHAGWRQAMEEEMLALEHNATWDLVPLPAGKQVVGCKWVYTTKVNPDGSLARLKA 928
A + W AM+EE+ ALE N TW++V LP GK+ +GCKWVY K G + R KA
Sbjct: 940 YYQAANDCRWVHAMKEEIQALEDNKTWEVVSLPKGKKAIGCKWVYKIKYKASGEIERFKA 999
Query: 929 RLVAKGYAQTYGVDYTDTFSPVAKLSSVRILISLAATNHWPLFQLDVKNAFLHGDLQDEV 988
RLVAKGY Q G+DY +TFSPV K+ ++R +++LA + W + Q+DV NAFL GDL +EV
Sbjct: 1000 RLVAKGYNQKEGLDYQETFSPVVKMVTLRTVLTLAVSKGWDIQQMDVYNAFLQGDLIEEV 1059
Query: 989 YMEQPPGFVAQGECG--KVCRLKKSLYGLKQSPRSWFGRFSDVVMEFGLRRSESDHTVFF 1046
YM+ P GF + G KVCRL KSLYGLKQ+ R W + + ++ G ++S D+++
Sbjct: 1060 YMQLPQGF-QYDKTGDPKVCRLLKSLYGLKQASRQWNVKLTTALLAAGFQQSHLDYSLML 1118
Query: 1047 KQTNKGCILLVVYVDDIVITGSDSEGIGNLKTFLQMKFQTKDLGILKYFLGIEVVYSKNG 1106
K+T G +++++YVDD++ITGS + I + K L+ F+ KDLG L+YFLG+E + +G
Sbjct: 1119 KRTADGIVIVLIYVDDLLITGSSLQLIDDAKQVLKANFKIKDLGTLRYFLGMEFARNASG 1178
Query: 1107 IMISQRKYVLDMLAETGLMGSKPCETPMEPGMKLTAEGVP-----------FSDPQQYRR 1155
+++ QRKY L+++++ GL GSKP TP+E +KLT +DP +Y+R
Sbjct: 1179 MLMHQRKYALELISDLGLGGSKPSVTPVELHLKLTTREFDLHVGSSGADSLLADPTEYQR 1238
Query: 1156 LVGKLNYLTVTRPDIAFPVSVVSQFMSSPTDAHWEALIRIVKYLKKAPGRGIVYRDHGHM 1215
LVG+L YLT+TRPDI+F V +SQFM +P +H EA IR+VKY+K+APG G+
Sbjct: 1239 LVGRLLYLTITRPDISFAVQHLSQFMHAPKVSHMEAAIRVVKYVKQAPGLGLYMAVQTAD 1298
Query: 1216 RVEAFSDADWAGSPMDRKSTTGYCVFLGGNLISWKSKKQNVVARSSAEAEYRAMAQTTC- 1274
++A+ DADW RKS TGY + G L+SWKSKKQ ++RSSAEAEYR++A T
Sbjct: 1299 TLQAYCDADWGSCINTRKSITGYMIQFGSALLSWKSKKQPTISRSSAEAEYRSLASTVAE 1358
Query: 1275 -MWVGQILSEMGIERISPMKLWCDNQAALHISSNPVFHERTKHIEVDCHFIREKLQQNLI 1333
+W+ + E+ + P+ L+CD++AA+ I++NPVFHERTKHI++DCHFIREK+Q L+
Sbjct: 1359 LVWLTGLFKELDMPLSLPVSLYCDSKAAIQIAANPVFHERTKHIDIDCHFIREKVQAGLV 1418
Query: 1334 STSYVRTGDQLADVFTKALNGVRNDFICNKLGMINIY 1370
Y+ T +Q AD+ TK L+ ++ ++ +KLG+ NI+
Sbjct: 1419 MIHYLPTQEQPADILTKGLSSAQHSYLVSKLGLKNIF 1455
>UniRef100_O04543 F20P5.25 protein [Arabidopsis thaliana]
Length = 1315
Score = 758 bits (1956), Expect = 0.0
Identities = 474/1363 (34%), Positives = 734/1363 (53%), Gaps = 126/1363 (9%)
Query: 53 WKMDDKRILALLVNSVDKRTQSVITHCQTVKELWEFLQFIFGKADNLNRIYALLQ*IFRP 112
W+ + + + L+NSV K + I + T +W+ L F K+ +L R+Y L Q I
Sbjct: 31 WRRCNSMVKSWLLNSVSKEIYTSILYFPTAAAIWKDLYTRFHKS-SLPRLYKLRQQIHSL 89
Query: 113 KQDKRKLMDYFLEFKKYAEELTSLLSC-KTKEDMLAQQKKLIALSWLSGLDQEFEVVRSQ 171
+Q L Y + EELTSL + +T ED+L +++ + +L GL+ ++ VRSQ
Sbjct: 90 RQGNLDLSSYHTRTQTLWEELTSLQAVPRTVEDLLIERETNRVIDFLMGLNDCYDTVRSQ 149
Query: 172 ILSSKQVDTLTDVFSRVMQSSFEKPKPAPDVDTSDRSA-LAAHSGFRGGRGGGRGGRGGA 230
IL K + +L++VF+ + D D + RSA ++ G +
Sbjct: 150 ILMKKTLPSLSEVFNMI------------DQDETQRSARISTTPGMTSSVFPVSNQSSQS 197
Query: 231 RGRGGRFGQIQ---CYSCGELGHYKN*C------PNSQQHQQHFQQSAPNRFANNVSQSD 281
G + + + C C GH ++ C P S + +Q F + P+ AN S+
Sbjct: 198 ALNGDTYQKKERPVCSYCSRPGHVEDTCYKKHGYPTSFKSKQKFVK--PSISANAAIGSE 255
Query: 282 VIQTQPEKRTVVMSDDEFARYTQFQISQQSASPSSSTATFVQTGNPTVCLSSTSRRWIID 341
+ T ++ + + F +S + PS+ P V S S
Sbjct: 256 EVVNNTSVSTGDLTTSQIQQLVSF-LSSKLQPPSTPV-------QPEVHSISVS------ 301
Query: 342 SGATNHMTGDSGIFLSFSSSSIHSSVTLADGSIVRVKGSGCTTPVSTLPMSSVLYLPQFP 401
S S S+V GS+ + L ++ VL++PQF
Sbjct: 302 -----------------SDPSSSSTVCPISGSVHLGRH---------LILNDVLFIPQFK 335
Query: 402 CNLLSISKITRSLKCSVTFFPDSCVFQDLSTQRIIGRGRESDGLYLLD-EGVSKAST--A 458
NLLS+S +T+S+ C + F SCV QD + + ++G G++ LY++D + +S T +
Sbjct: 336 FNLLSVSSLTKSMGCRIWFDETSCVLQDATRELMVGMGKQVANLYIVDLDSLSHPGTDSS 395
Query: 459 YRTSSVSPFQL-HCRLGHPSLGVLRKLC-----PQLESLSNFSCESCQFAKHHRSVYLPR 512
+SV+ L H RLGHPS+ L+ + P+ ++ ++F C C +K ++
Sbjct: 396 ITVASVTSHDLWHKRLGHPSVQKLQPMSSLLSFPKQKNNTDFHCRVCHISKQKHLPFVSH 455
Query: 513 LNKRAMSLFHIVHSDVWGPCPVTSKLGYKYFVTFVDDYSRATWLYLMKSRSELFTIFCNF 572
NK + F ++H D WGP V + GY+YF+T VDDYSRATW+YL++++S++ T+ F
Sbjct: 456 NNKSSRP-FDLIHIDTWGPFSVQTHDGYRYFLTIVDDYSRATWVYLLRNKSDVLTVIPTF 514
Query: 573 CAEIRTQFNCPIHILRSDNAKEYFSAPFRTFMDKHGMIHQSSCIVTPQQNGVAERKNRHL 632
+ QF I +RSDNA E F F G++ SC TPQQN V ERK++H+
Sbjct: 515 VTMVENQFETTIKGVRSDNAPEL---NFTQFYHSKGIVPYHSCPETPQQNSVVERKHQHI 571
Query: 633 MEVAQALMFQMKVPKCFWADAVLTAAYLINRMPSTVLNGVIPYSVLFPSCSLFPLPPKVF 692
+ VA++L FQ +P +W D +LTA YLINR+P+ +L P+ VL + + KVF
Sbjct: 572 LNVARSLFFQSHIPISYWGDCILTAVYLINRLPAPILEDKCPFEVLTKTVPTYD-HIKVF 630
Query: 693 GCTCFVLDVRPQVTKLDPKSLKCVFLGYSRTQKGYRCFSPALGRYLVSADVTFFEDC-SF 751
GC C+ K P++ C F+GY KGY+ +VS V F E+ F
Sbjct: 631 GCLCYASTSPKDRHKFSPRAKACAFIGYPSGFKGYKLLDLETHSIIVSRHVVFHEELFPF 690
Query: 752 SGWLPSSFPVCESEDTFLTYITTSPAPQTTTGTGFQFYEKTYSRRPKSSAPPPDTQSLPS 811
G + + E F + +P Q R+ P D+ S
Sbjct: 691 LG-----SDLSQEEQNFFPDLNPTPPMQ---------------RQSSDHVNPSDSSSSVE 730
Query: 812 IPLVSSDPHDNLDLP---IALRKGKRT-------CSYPISS-------YVTSNKLSPASK 854
I L S++P +N+ P + RK K+ C +SS +++ ++++
Sbjct: 731 I-LPSANPTNNVPEPSVQTSHRKAKKPAYLQDYYCHSVVSSTPHEIRKFLSYDRINDPYL 789
Query: 855 SFVAALDSVSVPKSLSDALSHAGWRQAMEEEMLALEHNATWDLVPLPAGKQVVGCKWVYT 914
+F+A LD P + ++A WR AM E LE TW++ LPA K+ +GC+W++
Sbjct: 790 TFLACLDKTKEPSNYTEAEKLQVWRDAMGAEFDFLEGTHTWEVCSLPADKRCIGCRWIFK 849
Query: 915 TKVNPDGSLARLKARLVAKGYAQTYGVDYTDTFSPVAKLSSVRILISLAATNHWPLFQLD 974
K N DGS+ R KARLVA+GY Q G+DY +TFSPVAKL+SV++L+ +AA L QLD
Sbjct: 850 IKYNSDGSVERYKARLVAQGYTQKEGIDYNETFSPVAKLNSVKLLLGVAARFKLSLTQLD 909
Query: 975 VKNAFLHGDLQDEVYMEQPPGFVA-QGEC---GKVCRLKKSLYGLKQSPRSWFGRFSDVV 1030
+ NAFL+GDL +E+YM P G+ + QG+ VCRLKKSLYGLKQ+ R W+ +FS +
Sbjct: 910 ISNAFLNGDLDEEIYMRLPQGYASRQGDSLPPNAVCRLKKSLYGLKQASRQWYLKFSSTL 969
Query: 1031 MEFGLRRSESDHTVFFKQTNKGCILLVVYVDDIVITGSDSEGIGNLKTFLQMKFQTKDLG 1090
+ G +S DHT F K ++ + ++VY+DDI+I ++ + LK+ ++ F+ +DLG
Sbjct: 970 LGLGFIQSYCDHTCFLKISDGIFLCVLVYIDDIIIASNNDAAVDILKSQMKSFFKLRDLG 1029
Query: 1091 ILKYFLGIEVVYSKNGIMISQRKYVLDMLAETGLMGSKPCETPMEPGMKLTAE-GVPFSD 1149
LKYFLG+E+V S GI ISQRKY LD+L ETG +G KP PM+P M + G F +
Sbjct: 1030 ELKYFLGLEIVRSDKGIHISQRKYALDLLDETGQLGCKPSSIPMDPSMVFAHDSGGDFVE 1089
Query: 1150 PQQYRRLVGKLNYLTVTRPDIAFPVSVVSQFMSSPTDAHWEALIRIVKYLKKAPGRGIVY 1209
YRRL+G+L YL +TRPDI F V+ ++QF +P AH +A+ +I++Y+K G+G+ Y
Sbjct: 1090 VGPYRRLIGRLMYLNITRPDITFAVNKLAQFSMAPRKAHLQAVYKILQYIKGTIGQGLFY 1149
Query: 1210 RDHGHMRVEAFSDADWAGSPMDRKSTTGYCVFLGGNLISWKSKKQNVVARSSAEAEYRAM 1269
++++ +++AD+ R+ST+GYC+FLG +LI WKS+KQ+VV++SSAEAEYR++
Sbjct: 1150 SATSELQLKVYANADYNSCRDSRRSTSGYCMFLGDSLICWKSRKQDVVSKSSAEAEYRSL 1209
Query: 1270 AQTT--CMWVGQILSEMGIERISPMKLWCDNQAALHISSNPVFHERTKHIEVDCHFIREK 1327
+ T +W+ L E+ + P L+CDN+AA+HI++N VFHERTKHIE DCH +RE+
Sbjct: 1210 SVATDELVWLTNFLKELQVPLSKPTLLFCDNEAAIHIANNHVFHERTKHIESDCHSVRER 1269
Query: 1328 LQQNLISTSYVRTGDQLADVFTKALNGVRNDFICNKLGMINIY 1370
L + L ++ T Q+AD FTK L + +K+G++NI+
Sbjct: 1270 LLKGLFELYHINTELQIADPFTKPLYPSHFHRLISKMGLLNIF 1312
>UniRef100_Q7XE85 Putative pol polyprotein [Oryza sativa]
Length = 1688
Score = 751 bits (1938), Expect = 0.0
Identities = 447/1080 (41%), Positives = 613/1080 (56%), Gaps = 78/1080 (7%)
Query: 335 SRRWIIDSGATNHMTGDSGIFLSFSSSSIHSSVTLADGSIVRVKGSGC-TTPVSTLPMSS 393
S+ WI+DSGA+ HM+ D S ++V A+G++ +V G ++P T+P +
Sbjct: 181 SQPWILDSGASFHMSFDDSWLTSCRLVKNGATVHTANGTLCKVTHQGSISSPQFTVP--N 238
Query: 394 VLYLPQFPCNLLSISKITRSLKCSVTFFPDSCVFQDLSTQRIIGRG---RESDGLYLLDE 450
V +P+ NL+S+ ++T + C V F SC QD T +IG G + S GLY+LD
Sbjct: 239 VSLVPKLSMNLISVGQLTDT-NCFVGFDDTSCFVQDRHTGAVIGTGHRQKRSCGLYILDS 297
Query: 451 GVSKASTAYRTSSVSPF---------QLHCRLGHPSLGVLRKLCPQ--LESL---SNFSC 496
+S+ S SP Q H RLGH L L Q L S+ + F C
Sbjct: 298 LSLPSSSTNTPSVYSPMCSTACKSFPQWHHRLGHLCGSRLATLINQGVLGSVPVDTTFVC 357
Query: 497 ESCQFAKHHRSVYLPRLNKRAMSLFHIVHSDVWGPCPVTSKLGYKYFVTFVDDYSRATWL 556
+ C+ K + Y P R+ F +VHSDVWG P SK G+ Y+V FVDDYSR TW+
Sbjct: 358 KGCKLGKQVQLPY-PSSTSRSSRPFDLVHSDVWGKSPFPSKGGHNYYVIFVDDYSRYTWI 416
Query: 557 YLMKSRSELFTIFCNFCAEIRTQFNCPIHILRSDNAKEYFSAPFRTFMDKHGMIHQSSCI 616
Y MK RS+L +I+ +F I TQF+ I I RSD+ EY S FR F+ G + Q SC
Sbjct: 417 YFMKHRSQLISIYQSFAQMIHTQFSSAIRIFRSDSGGEYMSNAFREFLVSQGTLPQLSCP 476
Query: 617 VTPQQNGVAERKNRHLMEVAQALMFQMKVPKCFWADAVLTAAYLINRMPSTVLNGVIPYS 676
QNGVAERK+RH++E A+ L+ VP FWA+A+ TA YLIN PS+ L G P
Sbjct: 477 GAHAQNGVAERKHRHIIETARTLLIASFVPAHFWAEAISTAVYLINMQPSSSLQGRSPGE 536
Query: 677 VLFPSCSLFPLPP-----KVFGCTCFVLDVRPQVTKLDPKSLKCVFLGYSRTQKGYRCFS 731
VLF S PP +VFGCTC+VL + TKL +S++CVFLGYS KGYRC+
Sbjct: 537 VLFGS------PPRYDHLRVFGCTCYVLLAPRERTKLTAQSVECVFLGYSLEHKGYRCYD 590
Query: 732 PALGRYLVSADVTFFEDCSFSGWLPSSFPVCESEDTFLTYITTSPAPQTTTGTGF----- 786
P+ R +S DVTF E+ F + ++ P Y+ P+P++ +
Sbjct: 591 PSARRIRISRDVTFDENKPFF-YSSTNQPSSPENSISFLYLPPIPSPESLPSSPITPSPS 649
Query: 787 ----QFYEKTYSRRPKSSAPPPDTQSLPS-IPLVSSDPH--------------------D 821
TY P S P PS IP SS PH
Sbjct: 650 PIPPSVPSPTYVPPPPPSPSPSPVSPPPSHIPASSSPPHVPSTITLDTFPFHYSRRPKIP 709
Query: 822 NLDLPIALRKGKRTCSYPISSYVTSNKL-------SPASKSFVAALDSVSVPKSLSDALS 874
N P TCS SS L +P FV + V P + +A+
Sbjct: 710 NESQPSQPTLEDPTCSVDDSSPAPRYNLRARDALRAPNRDDFVVGV--VFEPSTYQEAIV 767
Query: 875 HAGWRQAMEEEMLALEHNATWDLVPLPAGKQVVGCKWVYTTKVNPDGSLARLKARLVAKG 934
W+ AM EE+ ALE TWD+VPLP+ + CKWVY K DG + R KARLVA+G
Sbjct: 768 LPHWKLAMSEELAALERTNTWDVVPLPSHAVPITCKWVYKVKTKSDGQVERYKARLVARG 827
Query: 935 YAQTYGVDYTDTFSPVAKLSSVRILISLAATNHWPLFQLDVKNAFLHGDLQDEVYMEQPP 994
+ Q +G DY +TF+PVA +++VR LI++AAT W + Q+DVKNAFLHGDL +EVYM PP
Sbjct: 828 FQQAHGRDYDETFAPVAHMTTVRTLIAVAATRSWTISQMDVKNAFLHGDLHEEVYMHPPP 887
Query: 995 GFVAQGECGKVCRLKKSLYGLKQSPRSWFGRFSDVVMEFGLRRSESDHTVFFKQTNKGCI 1054
G + G V RL+++LYGLKQ+PR+WF RFS VV+ G S+ D +F +++G
Sbjct: 888 G--VEAPPGHVFRLRRALYGLKQAPRAWFARFSSVVLAAGFSPSDHDPALFIHTSSRGRT 945
Query: 1055 LLVVYVDDIVITGSDSEGIGNLKTFLQMKFQTKDLGILKYFLGIEVVYSKNGIMISQRKY 1114
LL++YVDD++ITG D E I +K L +F DLG L YFLGIEV + +G +SQ +Y
Sbjct: 946 LLLLYVDDMLITGDDLEYIAFVKGKLSEQFMMSDLGPLSYFLGIEVTSTVDGYYLSQHRY 1005
Query: 1115 VLDMLAETGLMGSKPCETPMEPGMKL-TAEGVPFSDPQQYRRLVGKLNYLTVTRPDIAFP 1173
+ D+LA++GL S+ TPME ++L + +G P DP +YR LVG L YLTVTRPDIA+
Sbjct: 1006 IEDLLAQSGLTDSRTTTTPMELHVRLRSTDGTPLDDPSRYRHLVGSLVYLTVTRPDIAYA 1065
Query: 1174 VSVVSQFMSSPTDAHWEALIRIVKYLKKAPGRGIVYRDHGHMRVEAFSDADWAGSPMDRK 1233
V ++SQF+S+P H+ L+R+++YL+ + + Y +++ AFSD+ WA P+DR+
Sbjct: 1066 VHILSQFVSAPISVHYGHLLRVLRYLRGTTTQCLFYAASSPLQLRAFSDSTWASDPIDRR 1125
Query: 1234 STTGYCVFLGGNLISWKSKKQNVVARSSAEAEYRAMAQTT--CMWVGQILSEMGIERISP 1291
S TGYC+FLG +L++WKSKKQ V+RSS EAE RA+A TT +W+ +L++ G+ P
Sbjct: 1126 SVTGYCIFLGTSLLTWKSKKQTAVSRSSTEAELRALATTTSEIVWLRWLLADFGVSCDVP 1185
Query: 1292 MKLWCDNQAALHISSNPVFHERTKHIEVDCHFIREKLQQNLISTSYVRTGDQLADVFTKA 1351
L CDN A+ I+++P+ HE TKHI VD F R QQ+ I+ YV + Q+AD FTKA
Sbjct: 1186 TPLLCDNTGAIQIANDPIKHELTKHIGVDASFTRSHCQQSTIALHYVPSELQVADFFTKA 1245
>UniRef100_Q9FX79 Putative retroelement polyprotein [Arabidopsis thaliana]
Length = 1413
Score = 748 bits (1931), Expect = 0.0
Identities = 484/1412 (34%), Positives = 712/1412 (50%), Gaps = 159/1412 (11%)
Query: 15 DGENYVEWKYLVAVSLGGMGKDEHLTGSCPTNATA---AAKWKMDDKRILALLVNSVDKR 71
DG NY +W + ++L K + GSCP W + + + ++NSV++
Sbjct: 72 DGANYNQWSSAMKIALDAKNKIAFIDGSCPRPEEGNHLLRIWSRCNSMVKSWILNSVNRE 131
Query: 72 TQSVITHCQTVKELWEFLQFIFGKADNLNRIYALLQ*IFRPKQDKRKLMDYFLEFKKYAE 131
I ++W L F NL R + L+Q I +Q L Y+ K +
Sbjct: 132 IYGSILSFDDAAQIWNDLHNRFHMT-NLPRTFQLVQQIQDLRQGSMNLSTYYTTLKTLRD 190
Query: 132 ELTSL-----------LSCKTKEDMLAQQKKLIALSWLSGLDQEFEVVRSQILSSKQVDT 180
L +C+++ + + + +L+GL++++ ++R QI+ K +
Sbjct: 191 NLDGAEASVPCHCCKKSTCESQIFAKSNVNRGRIIKFLAGLNEKYSIIRGQIIMKKPLPD 250
Query: 181 LTDVFSRVMQSSFEKPKPAPDVDTSDRSALAAHSGFRGGRGGGRGGRGGARGRGGRFGQI 240
L +V++ + Q ++ S+ A AA + G + G G +
Sbjct: 251 LAEVYNILDQDDSQR-------QFSNNVASAAFQVTKDDVQPGALASSSNMPQPGMLGAV 303
Query: 241 Q-------CYSCGELGHYKN*CPNSQQHQQHFQQSAPNRFANNVSQSDVIQTQPEKRTVV 293
Q C G GH C + +++ F ++Q+ P+ + V
Sbjct: 304 QKKDKKSICSHYGYTGHTSERCYKLHGYPVGWKKG--KSFYEKIAQASQSSQAPKPNSAV 361
Query: 294 ---------------------MSDDEFARYTQFQISQ-QSASPSSSTA------------ 319
MS D+ SQ Q ASP +TA
Sbjct: 362 TAQVTGNSQNTPAGLESLIGNMSKDQIQNLIALFSSQLQPASPVLNTAPMSTSHNNDPSG 421
Query: 320 ------TFVQTGNPTVCLSS-TSRRWIIDSGATNHMTGDSGIFLSFSSSSIHSSVTLADG 372
TF G TV + T WI+DSGAT+H+ +FL+ +S H V L G
Sbjct: 422 ITFSSSTFSFIGILTVSETEMTHGTWIVDSGATHHVCHVKDMFLNLDTSVQHH-VNLPTG 480
Query: 373 SIVRVKGSGCTTPVSTLPMSSVLYLPQFPCNLLSISKITRSLKCSVTFFPDSCVFQDLST 432
+ +RV G G + L + +VLY+P+F NLLS+S +T + V F P CV DL+
Sbjct: 481 TTIRVGGVGNIAVNADLILKNVLYIPEFRLNLLSVSALTTDIGARVVFDPTCCVVHDLTK 540
Query: 433 QRIIGRGRESDGLYLLDEGVSKASTAYRTSSVSPFQLHCRLGHPSLGVLRKLCPQLESLS 492
IG +D L G+ K G+L
Sbjct: 541 GSTIGSDLLTDVL-----GIFKTKNK--------------------GLLH---------- 565
Query: 493 NFSCESCQFAKHHRSVYLPRLNKRAMSLFHIVHSDVWGPCPVTSKLGYKYFVTFVDDYSR 552
C+ CQ AK + Y P + ++ F ++H DVWGP ++ GY YF+T VDD++R
Sbjct: 566 ---CDICQRAKQKKLTY-PSRHNICLAPFDLLHIDVWGPFSEPTQEGYHYFLTIVDDHTR 621
Query: 553 ATWLYLMKSRSELFTIFCNFCAEIRTQFNCPIHILRSDNAKEYFSAPFRTFMDKHGMIHQ 612
TW+YLMK +S++ TIF +F + TQ++ + +RSDNA E F + G++
Sbjct: 622 VTWVYLMKYKSDVLTIFPDFITMVETQYDTKVKAVRSDNAPEL---KFEELYRRKGIVAY 678
Query: 613 SSCIVTPQQNGVAERKNRHLMEVAQALMFQMKVPKCFWADAVLTAAYLINRMPSTVLNGV 672
SC TP+QN V ERK++H++ VA+AL+FQ ++P +W D +LTA ++INR PS V++
Sbjct: 679 HSCPETPEQNSVVERKHQHILNVARALLFQSQIPLSYWGDCILTAVFIINRTPSPVISNK 738
Query: 673 IPYSVLFPSCSLFPLPPKVFGCTCFVLDVRPQVTKLDPKSLKCVFLGYSRTQKGYRCFSP 732
+ +L + K FGC C+ Q K + ++ C FLGY KGY+
Sbjct: 739 TLFEMLTKKVPDYT-HLKSFGCLCYASTSPKQRHKFEDRARTCAFLGYPSGYKGYKLLDL 797
Query: 733 ALGRYLVSADVTFFEDCSFSGWLPSSFPVCESEDT--FLTYI--------TTSPAPQTTT 782
+S +V F+ED P E+E++ F +I + P P T
Sbjct: 798 ESHTIFISRNVVFYEDL-----FPFKTKPAENEESSVFFPHIYVDRNDSHPSQPLPVQET 852
Query: 783 GTGFQFYEKTYSRRPKSSAPPPDTQSLPSIPLVSSDPHDNLDLPIALRKGKRTCSYPISS 842
EK SR S PP + + SS H PIS
Sbjct: 853 SASNVPAEKQNSR---VSRPPAYLKDYHCNSVTSSTDH------------------PISE 891
Query: 843 YVTSNKLSPASKSFVAALDSVSVPKSLSDALSHAGWRQAMEEEMLALEHNATWDLVPLPA 902
++ + LS F+ A++ + P + + A W AM E+ ALE N TW + LP
Sbjct: 892 VLSYSSLSDPYMIFINAVNKIPEPHTYAQARQIKEWCDAMGMEITALEDNGTWVVCSLPV 951
Query: 903 GKQVVGCKWVYTTKVNPDGSLARLKARLVAKGYAQTYGVDYTDTFSPVAKLSSVRILISL 962
GK+ VGCKWVY K+N DGSL R KARLVAKGY QT G+DY DTFSPVAKL++V++LI++
Sbjct: 952 GKKAVGCKWVYKIKLNADGSLERYKARLVAKGYTQTEGLDYVDTFSPVAKLTTVKLLIAV 1011
Query: 963 AATNHWPLFQLDVKNAFLHGDLQDEVYMEQPPGF-VAQGEC---GKVCRLKKSLYGLKQS 1018
AA W L QLD+ NAFL+G L +E+YM PPG+ QG+ VCRLKKSLYGLKQ+
Sbjct: 1012 AAAKGWSLSQLDISNAFLNGSLDEEIYMTLPPGYSPRQGDSFPPNAVCRLKKSLYGLKQA 1071
Query: 1019 PRSWFGRFSDVVMEFGLRRSESDHTVFFKQTNKGCILLVVYVDDIVITGSDSEGIGNLKT 1078
R W+ +FS+ + G +S DHT+F +++ + ++VYVDDI+I S L+
Sbjct: 1072 SRQWYLKFSESLKALGFTQSSGDHTLFTRKSKNSYMAVLVYVDDIIIASSCDRETELLRD 1131
Query: 1079 FLQMKFQTKDLGILKYFLGIEVVYSKNGIMISQRKYVLDMLAETGLMGSKPCETPMEPGM 1138
LQ + +DLG L+YFLG+E+ + +GI I QRKY L++LAETGL+G K PMEP
Sbjct: 1132 ALQRSSKLRDLGTLRYFLGLEIARNTDGISICQRKYTLELLAETGLLGCKSSSVPMEPNQ 1191
Query: 1139 KLTAE-GVPFSDPQQYRRLVGKLNYLTVTRPDIAFPVSVVSQFMSSPTDAHWEALIRIVK 1197
KL+ E G D + YR+LVGKL YLT TRPDI + V + QF S+P H +A+ +I+
Sbjct: 1192 KLSQEDGELIDDAEHYRKLVGKLMYLTFTRPDITYAVHRLCQFTSAPRVPHLKAVYKIIY 1251
Query: 1198 YLKKAPGRGIVYRDHGHMRVEAFSDADWAGSPMDRKSTTGYCVFLGGNLISWKSKKQNVV 1257
YLK G+G+ Y + +++ F+D+D++ RK TTGYC+FLG +L++WKSKKQ V+
Sbjct: 1252 YLKGTVGQGLFYSANVDLKLSGFADSDFSSCSDSRKLTTGYCMFLGTSLVAWKSKKQEVI 1311
Query: 1258 ARSSAEAEYRAMAQTT--CMWVGQILSEMGIERISPMKLWCDNQAALHISSNPVFHERTK 1315
+ SSAEAEY+AM+ MW+ +L ++ I+ L+CDN AA+HI++NPVFHERTK
Sbjct: 1312 SMSSAEAEYKAMSMAVREMMWLRFLLEDLWIDVSEASVLYCDNTAAIHIANNPVFHERTK 1371
Query: 1316 HIEVDCHFIREKLQQNLISTSYVRTGDQLADV 1347
HIE D H IREK+ LI T +VRT +QLAD+
Sbjct: 1372 HIERDYHHIREKIILGLIRTLHVRTENQLADI 1403
>UniRef100_Q9C692 Polyprotein, putative [Arabidopsis thaliana]
Length = 1468
Score = 736 bits (1900), Expect = 0.0
Identities = 493/1469 (33%), Positives = 752/1469 (50%), Gaps = 159/1469 (10%)
Query: 18 NYVEWKYLVAVSLGGMGKDEHLTGSCPTNATAAAKWKMDDKRILALLVN----SVDKRTQ 73
NY EW +L K L G+ P + + D I ALLV+ ++D
Sbjct: 42 NYEEWACGFKTALRSRKKFGFLDGTIPQPLDGSPDLE-DWLTINALLVSWMKMTIDSELL 100
Query: 74 SVITHCQTVKELWEFLQFIFGKADNLNRIYALLQ*IFRPKQDKRKLMDYFLEFKKYAEEL 133
+ I+H ++LWE ++ F N + + + KQ+ + Y+ + K + +
Sbjct: 101 TNISHRDVARDLWEQIRKRFS-VSNGPKNQKMKADLATCKQEGMTVEGYYGKLNKIWDNI 159
Query: 134 TSLLS----------CKTKEDMLAQQKKLIALSWLSGLDQ-EFEVVRSQILSSKQVDTLT 182
S C D ++ + +L GL++ +F +RS + S + L
Sbjct: 160 NSYRPLRICKCGRCICNLGTDQEKYREDDMVHQYLYGLNETKFHTIRSSLTSRVPLPGLE 219
Query: 183 DVFSRVMQSSFEKPKPAPDVDTSDRSALAAHSGFRGGRGGGRGGRGGARGRGGRFGQIQ- 241
+V++ V Q + + + +D +A A R + +F +
Sbjct: 220 EVYNIVRQEEDMVNNRSSNEERTDVTAFAVQM------------RPRSEVISEKFANSEK 267
Query: 242 ------CYSCGELGHYKN*C-------------PNSQQHQQHFQQSAPNRFANNVSQS-- 280
C C GH C P + + RF +
Sbjct: 268 LQNKKLCTHCNRGGHSPENCFVLIGYPEWWGDRPRGKSNSNGSTSRGRGRFGPGFNGGQP 327
Query: 281 -----DVIQTQP------EKRTVVMSD-DEFARYTQFQ------ISQQSASPSSSTATFV 322
+V+ T P R + SD D + T Q + S + S A
Sbjct: 328 RPTYVNVVMTGPFPSSEHVNRVITDSDRDAVSGLTDEQWRGVVKLLNAGRSDNKSNAHET 387
Query: 323 QTGNPTVCLSSTSRRWIIDSGATNHMTGDSGIFLSFSSSSIHSSVTLADGSIVRVKGSGC 382
Q+G C TS WI+D+GA++HMTG+ + S S + LADG+ G
Sbjct: 388 QSGT---CSLFTS--WILDTGASHHMTGNLELLSDMRSMS-PVLIILADGNKRVAVSEGT 441
Query: 383 TTPVSTLPMSSVLYLPQFPCNLLSISKITRSLKCSVTFFPDSCVFQDLSTQRIIGRGRES 442
S L + SV Y+ + +L+S+ ++ C D +T+ + G+
Sbjct: 442 VRLGSHLILKSVFYVKELESDLISVGQMMDENHCV-----------DRTTRMVTRIGKRE 490
Query: 443 DGLYLLDEGVSKASTAYRTSSVSPFQL-HCRLGHPSLGVLRKLCPQL-----ESLSNFSC 496
+G + G+ A+ A TS +PF L H RLGH S ++ L +L E L N C
Sbjct: 491 NGSFCF-RGMENAA-AVHTSVKAPFDLWHRRLGHASDKIVNLLPRELLSSGKEILENV-C 547
Query: 497 ESCQFAKHHRSVYLPRLNKRAMSLFHIVHSDVWGPCPVTSKLGYKYFVTFVDDYSRATWL 556
++C AK R + P + R+M F ++H DVWGP S G +YF+T VDDYSR W+
Sbjct: 548 DTCMRAKQTRDTF-PLSDNRSMDSFQLIHCDVWGPYRAPSYSGARYFLTIVDDYSRGVWV 606
Query: 557 YLMKSRSELFTIFCNFCAEIRTQFNCPIHILRSDNAKEYFSAPFRTFMDKHGMIHQSSCI 616
YLM +SE +F A + QF+ I I+RSDN E+ R + G+ H++SC+
Sbjct: 607 YLMTDKSETQKHLKDFIALVERQFDTEIKIVRSDNGTEFLC--MREYFLHKGIAHETSCV 664
Query: 617 VTPQQNGVAERKNRHLMEVAQALMFQMKVPKCFWADAVLTAAYLINRMPSTVLNGVIPYS 676
TP QNG ERK+RH++ +A+AL FQ +P FW + +L+AAYLINR PS +L G PY
Sbjct: 665 GTPHQNGRVERKHRHILNIARALRFQSYLPIQFWGECILSAAYLINRTPSMLLQGKSPYE 724
Query: 677 VLFPSCSLFPLPPKVFGCTCFVLDVRPQVTKLDPKSLKCVFLGYSRTQKGYRCFSPALGR 736
+L+ + + +VFG C+ + + K +S +CVF+GY QKG+R F +
Sbjct: 725 MLYKTAPKYS-HLRVFGSLCYAHNQNHKGDKFAARSRRCVFVGYPHGQKGWRLFDLEEQK 783
Query: 737 YLVSADVTFFEDCSFSGWLPSSFPVCESEDTFL-------TYITTSPAPQTTTG--TGFQ 787
+ VS DV F++ F P S C ED + +I + P+T G G
Sbjct: 784 FFVSRDV-IFQETEF----PYSKMSCNEEDERVLVDCVGPPFIEEAIGPRTIIGRNIGEA 838
Query: 788 FYEKTYSRRP------KSSAPPPDTQSLPSI-PLVSSDPHDNLDL--------PIALRKG 832
+ P + S+ P + SL S+ P ++S DL PI LR+
Sbjct: 839 TVGPNVATGPIIPEINQESSSPSEFVSLSSLDPFLASSTVQTADLPLSSTTPAPIQLRRS 898
Query: 833 KR---------------------------TCSYPISSYVTSNKLSPASKSFVAALDSVSV 865
R + YPI YV ++ + + K+F+AA+ +
Sbjct: 899 SRQTQKPMKLKNFVTNTVSVESISPEASSSSLYPIEKYVDCHRFTSSHKAFLAAVTAGME 958
Query: 866 PKSLSDALSHAGWRQAMEEEMLALEHNATWDLVPLPAGKQVVGCKWVYTTKVNPDGSLAR 925
P + ++A+ WR+AM E+ +L N T+ +V LP GK+ +G KWVY K DG++ R
Sbjct: 959 PTTYNEAMVDKAWREAMSAEIESLRVNQTFSIVNLPPGKRALGNKWVYKIKYRSDGAIER 1018
Query: 926 LKARLVAKGYAQTYGVDYTDTFSPVAKLSSVRILISLAATNHWPLFQLDVKNAFLHGDLQ 985
KARLV G Q GVDY +TF+PVAK+S+VR+ + +AA W + Q+DV NAFLHGDL+
Sbjct: 1019 YKARLVVLGNCQKEGVDYDETFAPVAKMSTVRLFLGVAAARDWHVHQMDVHNAFLHGDLK 1078
Query: 986 DEVYMEQPPGFVAQGECGKVCRLKKSLYGLKQSPRSWFGRFSDVVMEFGLRRSESDHTVF 1045
+EVYM+ P GF + KVCRL KSLYGLKQ+PR WF + S + ++G +S SD+++F
Sbjct: 1079 EEVYMKLPQGFQCD-DPSKVCRLHKSLYGLKQAPRCWFSKLSSALKQYGFTQSLSDYSLF 1137
Query: 1046 FKQTNKGCILLVVYVDDIVITGSDSEGIGNLKTFLQMKFQTKDLGILKYFLGIEVVYSKN 1105
+ + ++VYVDD++I+GS + + K++L+ F KDLG+LKYFLGIEV +
Sbjct: 1138 SYNNDGIFVHVLVYVDDLIISGSCPDAVAQFKSYLESCFHMKDLGLLKYFLGIEVSRNAQ 1197
Query: 1106 GIMISQRKYVLDMLAETGLMGSKPCETPMEPGMKLTAEGVP-FSDPQQYRRLVGKLNYLT 1164
G +SQRKYVLD+++E GL+G++P P+E KL+ P SD +YRRLVG+L YL
Sbjct: 1198 GFYLSQRKYVLDIISEMGLLGARPSAFPLEQNHKLSLSTSPLLSDSSRYRRLVGRLIYLV 1257
Query: 1165 VTRPDIAFPVSVVSQFMSSPTDAHWEALIRIVKYLKKAPGRGIVYRDHGHMRVEAFSDAD 1224
VTRP++++ V ++QFM +P HW A IR+V+YLK PG+GI+ +++ + D+D
Sbjct: 1258 VTRPELSYSVHTLAQFMQNPRQDHWNAAIRVVRYLKSNPGQGILLSSTSTLQINGWCDSD 1317
Query: 1225 WAGSPMDRKSTTGYCVFLGGNLISWKSKKQNVVARSSAEAEYRAMAQTT--CMWVGQILS 1282
+A P+ R+S TGY V LG ISWK+KKQ V+RSSAEAEYRAMA T MW+ ++L
Sbjct: 1318 YAACPLTRRSLTGYFVQLGDTPISWKTKKQPTVSRSSAEAEYRAMAFLTQELMWLKRVLY 1377
Query: 1283 EMGIERISPMKLWCDNQAALHISSNPVFHERTKHIEVDCHFIREKLQQNLISTSYVRTGD 1342
++G+ + M+++ D+++A+ +S NPV HERTKH+EVDCHFIR+ + +I+TS+V +
Sbjct: 1378 DLGVSHVQAMRIFSDSKSAIALSVNPVQHERTKHVEVDCHFIRDAILDGIIATSFVPSHK 1437
Query: 1343 QLADVFTKALNGVRNDFICNKLGMINIYA 1371
QLAD+ TKAL + KLG+++++A
Sbjct: 1438 QLADILTKALGEKEVRYFLRKLGILDVHA 1466
>UniRef100_Q5XWK9 Gag-pol polyprotein-like [Solanum tuberosum]
Length = 1212
Score = 731 bits (1888), Expect = 0.0
Identities = 445/1257 (35%), Positives = 677/1257 (53%), Gaps = 95/1257 (7%)
Query: 16 GENYVEWKYLVAVSLGGMGKDEHLTGS--CPTNATAAAKWKMDDKRILALLVNSVDKRTQ 73
G+NY W++ + + G ++ GS PT+AT +WK+ D R++ ++ S+D
Sbjct: 15 GKNYSSWEFQFQLFVTGKELWGYIDGSDPAPTDATKLGEWKIKDARVMTWILGSIDPLIV 74
Query: 74 SVITHCQTVKELWEFLQFIFGKADNLNRIYALLQ*IFRPKQDKRKLMDYFLEFKKYAEEL 133
+ +TVK +W++LQ ++ + DN R + L I Q + DYF F+ E
Sbjct: 75 LNLRPYKTVKAMWDYLQKVYNQ-DNSARRFQLEYEIANYSQGGLFVQDYFSGFQNLWAEF 133
Query: 134 TSLLSCKTKEDMLAQQKKLIALS----WLSGLDQEFEVVRSQILSSKQVDTLTDVFSRVM 189
T ++ K + L+ + + S +L L +FE +RS +++ +L F ++
Sbjct: 134 TDIVYAKIPTESLSVIQAVHEQSKRDQFLMKLRSDFESIRSNLMNRDPSPSLDVCFRELL 193
Query: 190 QSSFEKPKPAPDVDTSDRSALAAHSGFRGGRGGGRGGRGGARGRGGRFGQIQCYSCGELG 249
+ E+ +V + A + +G+G + QCYSC E G
Sbjct: 194 RE--EQRLVTQNVFKKENDVTVAFAA-------------QGKGKGRDMSRTQCYSCKEYG 238
Query: 250 HYKN*CP----NSQQHQQHFQQSAPNRFANNVSQSDVIQTQPEKRTVVMSDDEFAR---Y 302
H + C N + Q H + P R N + + Q + T DD +
Sbjct: 239 HIASNCSKKFYNYCKQQGHIIKECPMRPQNR--RINAFQARINGST----DDNSSLGQVL 292
Query: 303 TQFQISQQSASPSSSTATFVQTGNPTVCLSSTSRRWIIDSGATNHMTGDSGIFLSFSSSS 362
T + Q S S+ GN TS WI+DSGA+NHMT + I +
Sbjct: 293 TPEMVQQMIVSAFSALGL---QGNDV-----TSNFWIVDSGASNHMTNSTSILKNVRKYQ 344
Query: 363 IHSSVTLADGSIVRVKGSGCTTPVSTLPMSSVLYLPQFPCNLLSISKITRSLKCSVTFFP 422
S + +A+GS + + G TP +V P+ +L+S+ ++ + C V F
Sbjct: 345 GPSQIQIANGSNLPITKVGDITPT----FKNVFVSPKLSTSLISVGQLVDN-NCDVNFSR 399
Query: 423 DSCVFQDLSTQRIIGRGRESDGLYLLDEGVSKASTAYRTSSVSPFQL-HCRLGHPSLGVL 481
+ C+ QD + II +G + L+ + + + TS+ S ++ H RLGHP+ VL
Sbjct: 400 NGCLVQDQVSGTIIAKGPKVGRLFPIHFSIPPVLSFACTSTASKTEVWHKRLGHPNSVVL 459
Query: 482 RKLC-------PQLESLSNFSCESCQFAKHHRSVYLPRLNKRAMSLFHIVHSDVWGPCPV 534
+ S+++ C +C+ K +++ P RA F ++HSDVWG P+
Sbjct: 460 SHISNSGLLGNKNKFSVASIDCSTCKLGKS-KTLPFPNFGSRATKCFDVIHSDVWGISPI 518
Query: 535 TSKLGYKYFVTFVDDYSRATWLYLMKSRSELFTIFCNFCAEIRTQFNCPIHILRSDNAKE 594
S +KYF+TF+DDYSR TW+Y ++S+SE+F++F F A I TQF+ I +LRSD+ E
Sbjct: 519 ISHAHFKYFMTFIDDYSRFTWVYFLRSKSEVFSMFKTFLAYIETQFSTCIKLLRSDSGGE 578
Query: 595 YFSAPFRTFMDKHGMIHQSSCIVTPQQNGVAERKNRHLMEVAQALMFQMKVPKCFWADAV 654
Y S F+ F+ G++ Q SC TPQQNGVAERKNRHL++V + L+ + VP +W +A+
Sbjct: 579 YMSYEFKKFLLDKGIVSQHSCPYTPQQNGVAERKNRHLLDVTRTLLIESSVPSKYWVEAL 638
Query: 655 LTAAYLINRMPSTVLNGVIPYSVLF---PSCSLFPLPPKVFGCTCFVLDVRPQVTKLDPK 711
TA YLINR+PS VLN PY L+ P+ S F FGC CFV Q KL +
Sbjct: 639 STAVYLINRLPSKVLNLESPYFRLYHQNPNYSDF----HTFGCVCFVHLPPSQCNKLSVQ 694
Query: 712 SLKCVFLGYSRTQKGYRCFSPALGRYLVSADVTFFEDCSFSGWLPSSFPVCESEDTFLTY 771
S KC F+GYS +QKG+ C+ P ++ +S +V FFE+ F FP T +
Sbjct: 695 STKCAFMGYSTSQKGFICYDPCSHKFRISRNVVFFENQYF-------FP------TIVDL 741
Query: 772 ITTSPAPQT--TTGTGFQFYEK--TYSRRPKSSAPPPDTQSLPSIPLVSSDPHDNLDLPI 827
+ SP T + F+ ++ Y RR P++P ++DP +
Sbjct: 742 SSVSPLLPTFEDLSSSFKRFKPGFVYERR------------RPTLPYPNTDPPPETAPQL 789
Query: 828 ALRKGKRTCSYPISSYVTSNKLSPASKSFVAALDSVSVPKSLSDALSHAGWRQAMEEEML 887
R+ + T +P F + L ++SVP S A H W++AMEEE+L
Sbjct: 790 ESENSSRSGPLEPTRRSTRVSRTPNWYGFSSTLSNISVPSCYSQASKHECWQKAMEEELL 849
Query: 888 ALEHNATWDLVPLPAGKQVVGCKWVYTTKVNPDGSLARLKARLVAKGYAQTYGVDYTDTF 947
AL+ N TWD+V P+ + +GCKWVY+ K++ DG+L R KARLV G Q YGVDY +TF
Sbjct: 850 ALKENDTWDIVSCPSNVRPIGCKWVYSIKLHSDGTLDRYKARLVVLGNRQEYGVDYEETF 909
Query: 948 SPVAKLSSVRILISLAATNHWPLFQLDVKNAFLHGDLQDEVYMEQPPGFVAQGECGKVCR 1007
+PVAK+++VR +I++AA+ +W L+Q DVKNAFLHGDL++++YM+ PP + VC+
Sbjct: 910 APVAKMTTVRTIIAIAASQNWSLYQKDVKNAFLHGDLKEDIYMKPPPDLFS-SPTSDVCK 968
Query: 1008 LKKSLYGLKQSPRSWFGRFSDVVMEFGLRRSESDHTVFFKQTNKGCILLVVYVDDIVITG 1067
LK+SLYGLKQ+PR+WF +F +++F S+ D ++F ++T+ C+LL+VYVDDI+ITG
Sbjct: 969 LKRSLYGLKQAPRAWFDKFRSTLLQFSFELSKYDSSLFLRKTSTSCVLLLVYVDDIIITG 1028
Query: 1068 SDSEGIGNLKTFLQMKFQTKDLGILKYFLGIEVVYSKNGIMISQRKYVLDMLAETGLMGS 1127
+DS I L+ L+ F KDLG L YFLG+EV +G+ ++Q KY D+++ GL S
Sbjct: 1029 TDSSLITCLQQQLKDSFHMKDLGTLTYFLGLEVHNVASGVFLNQHKYTQDLISLAGLQVS 1088
Query: 1128 KPCETPMEPGMKL-TAEGVPFSDPQQYRRLVGKLNYLTVTRPDIAFPVSVVSQFMSSPTD 1186
+TP+E +K EG DP +R+LVG LNYLT+TRPDI+F V VSQFM +P
Sbjct: 1089 SSVDTPLEMNVKYRREEGDLLPDPTIFRQLVGSLNYLTITRPDISFAVQQVSQFMQAPRH 1148
Query: 1187 AHWEALIRIVKYLKKAPGRGIVYRDHGHMRVEAFSDADWAGSPMDRKSTTGYCVFLG 1243
H A+ I++YL RG+ + +R+ AFSD+DWAG P R+S +G+C+FLG
Sbjct: 1149 LHLVAVCHIIRYLLGTSTRGLFFPSGSPIRLNAFSDSDWAGCPDTRRSVSGWCMFLG 1205
>UniRef100_Q9LFY6 T7N9.5 [Arabidopsis thaliana]
Length = 1436
Score = 726 bits (1873), Expect = 0.0
Identities = 484/1460 (33%), Positives = 725/1460 (49%), Gaps = 207/1460 (14%)
Query: 15 DGENYVEWKYLVAVSLGGMGKDEHLTGSCPTNATAAAKWKMDDKRILALLVNSVDKRTQS 74
DG NY W + +SL K + GS LL SVD T
Sbjct: 76 DGSNYNSWSIAMRISLDAKNKLGFVDGS--------------------LLRPSVDDSTFR 115
Query: 75 VITHCQTVKELWEFLQFIFGKADNLNRIYALLQ*IFRPKQDKRKLMDYFLEFKKYAEELT 134
+ + C ++ +NL R Y L Q + +Q K L YF + K E+L
Sbjct: 116 IWSRCNSM-------------VNNLPRRYQLEQAVMTLQQGKLDLSTYFTKKKTLWEQLA 162
Query: 135 SLLSCKTKEDMLAQQKKLI-------ALSWLSGLDQEFEVVRSQILSSKQVDTLTDVFSR 187
+ S K+ Q K+L+ + +L GL +F +RSQI + K L ++++
Sbjct: 163 NTKSRSVKKCDCDQVKELLEEAETSRVIQFLMGLSDDFNTIRSQIFNMKPRPGLNEIYNM 222
Query: 188 VMQSSFEK---------PKPAPDVDTSDRSALAAHSGFRGGRGGGRGGRGGARGRGGRFG 238
+ Q ++ P P+P + G + G F
Sbjct: 223 LDQDESQRLVGFAAKSVPSPSPAAFQTQ---------------GVLNDQNTILLAQGNFK 267
Query: 239 QIQCYSCGELGHYKN*CPNSQQHQQHFQQSAPNRF--ANNVSQSDVIQTQ-PEKRTVV-- 293
+ +C C +GH + C + ++ N + + N++ +D I+TQ P +
Sbjct: 268 KPKCTHCNRIGHTVDKCYKVHGYPPGHPRAKENTYVGSTNLASTDQIETQAPPTMSATGH 327
Query: 294 --MSDDEFARYTQF-----------------------------QISQQSASPSSS----- 317
MS+D + + QI+ ++ + SS+
Sbjct: 328 ETMSNDHIQQLISYLSTKLQSPSITSCFDKAIASSSNPVPSISQITDKAIASSSNPVPSI 387
Query: 318 ---TATFVQTGNPTVCLSSTS----------RRWIIDSGATNHMTGDSGIFLSFSSSSIH 364
T TF + T TS R W+IDSGA++H+T + ++ ++ +
Sbjct: 388 SQITGTFFSLYDSTYYEMLTSSIPIETELSLRAWVIDSGASHHVTHERNLYHTYKALD-R 446
Query: 365 SSVTLADGSIVRVKGSGCTTPVSTLPMSSVLYLPQFPCNLLSISKITRSLKCSVTFFPDS 424
+ V L +G V+++G+G L + +VL++P+F NLLS+S +T++L+ V+F D
Sbjct: 447 TFVRLPNGHTVKIEGTGFIQLTDALSLHNVLFIPEFKFNLLSVSVLTKTLQSKVSFTSDE 506
Query: 425 CVFQDLSTQRIIGRGRESDGLYLL--DEGVSKASTAYRTSSVSPFQ-----LHCRLGHPS 477
C+ Q L+ + ++G+G + LY+L D+ + S+ S S + H RLGHPS
Sbjct: 507 CMIQALTKELMLGKGSQVGNLYILNLDKSLVDVSSFPGKSVCSSVKNESEMWHKRLGHPS 566
Query: 478 LGVLRKLCPQL---ESLSNFSCESCQFAKHHRSVYLP--RLNKRAMSLFHIVHSDVWGPC 532
+ L L + N C + +LP +N F +VH D WGP
Sbjct: 567 FAKIDTLSDVLMLPKQKINKDSSHCHVCHLSKQKHLPFKSVNHIREKAFELVHIDTWGPF 626
Query: 533 PVTSKLGYKYFVTFVDDYSRATWLYLMKSRSELFTIFCNFCAEIRTQFNCPIHILRSDNA 592
V + Y+YF+T VDD+SRATW+YL+K +S++ T+F +F + TQ++ + +RSDNA
Sbjct: 627 SVPTVDSYRYFLTIVDDFSRATWIYLLKQKSDVLTVFPSFLKMVETQYHTKVCSVRSDNA 686
Query: 593 KEYFSAPFRTFMDKHGMIHQSSCIVTPQQNGVAERKNRHLMEVAQALMFQMKVPKCFWAD 652
E F K G+ C TP+QN V ERK++HL+ VA+ALMFQ +P +W D
Sbjct: 687 HEL---KFNELFAKEGIKADHPCPETPEQNFVVERKHQHLLNVARALMFQSGIPLEYWGD 743
Query: 653 AVLTAAYLINRMPSTVLNGVIPYSVLF---PSCSLFPLPPKVFGCTCFVLDVRPQVTKLD 709
VLTA +LINR+ S V+N PY L P S K FGC C+ TK D
Sbjct: 744 CVLTAVFLINRLLSPVINNETPYERLTKGKPDYSSL----KAFGCLCYCSTSPKSRTKFD 799
Query: 710 PKSLKCVFLGYSRTQKGYRCFSPALGRYLVSADVTFFEDCSFSGWLPSSFPVCESEDT-- 767
P++ C+FLGY KGY+ +S V F+ED FP S T
Sbjct: 800 PRAKACIFLGYPMGYKGYKLLDIETYSVSISRHVIFYEDI---------FPFASSNITDA 850
Query: 768 ---FLTYITTSPAPQTTTGTGFQFYEKTYSRRPKSSAPPPDTQSLPSIPLVSSDPHDNLD 824
F +I PAP ++ SS P + S+ V S+P
Sbjct: 851 AKDFFPHIYL-PAPNN---------DEHLPLVQSSSDAPHNHDESSSMIFVPSEPKSTRQ 900
Query: 825 --LPIALRK---------GKRTCSYPISSYVTSNKLSPASKSFVAALDSVSVPKSLSDAL 873
LP L+ +T YP+++Y++ + LS +F+ + + +P+ S+A
Sbjct: 901 RKLPSHLQDFHCYNNTPTTTKTSPYPLTNYISYSYLSEPFGAFINIITATKLPQKYSEAR 960
Query: 874 SHAGWRQAMEEEMLALEHNATWDLVPLPAGKQVVGCKWVYTTKVNPDGSLARLKARLVAK 933
W AM +E+ A TW + LPAGK VGCKW+ T K DGS+ R KARLVAK
Sbjct: 961 LDKVWNDAMGKEISAFVRTGTWSICDLPAGKVAVGCKWIITIKFLADGSIERHKARLVAK 1020
Query: 934 GYAQTYGVDYTDTFSPVAKLSSVRILISLAATNHWPLFQLDVKNAFLHGDLQDEVYMEQP 993
GY Q G+D+ +TFSPVAK+ +V++L+SLA W L QLD+ NA L+GDL++E+YM+ P
Sbjct: 1021 GYTQQEGIDFFNTFSPVAKMVTVKVLLSLAPKMKWYLHQLDISNALLNGDLEEEIYMKLP 1080
Query: 994 PGFVAQGECGKVCRLKKSLYGLKQSPRSWFGRFSDVVMEFGLRRSESDHTVFFKQTNKGC 1053
PG+ + G + SP + + DHT+F K +
Sbjct: 1081 PGY-------------SEIQGQEVSPNA---------------KCHGDHTLFVKAQDGFF 1112
Query: 1054 ILLVVYVDDIVITGSDSEGIGNLKTFLQMKFQTKDLGILKYFLGIEVVYSKNGIMISQRK 1113
++++VYVDDI+I + L + L FQ +DLG K+FLGIE+ + +GI + QRK
Sbjct: 1113 LVVLVYVDDILIASTTEAASAELTSQLSSFFQLRDLGEPKFFLGIEIARNADGISLCQRK 1172
Query: 1114 YVLDMLAETGLMGSKPCETPMEPGMKLTAE-GVPFSDPQQYRRLVGKLNYLTVTRPDIAF 1172
YVLD+LA + KP PMEP KL+ + G D +QYRR++GKL YL +TRPDI F
Sbjct: 1173 YVLDLLASSDFSDCKPSSIPMEPNQKLSKDTGTLLEDGKQYRRILGKLQYLCLTRPDINF 1232
Query: 1173 PVSVVSQFMSSPTDAHWEALIRIVKYLKKAPGRGIVYRDHGHMRVEAFSDADWAGSPMDR 1232
VS ++Q+ S+PTD H +AL +I++YLK G+G+ Y + + FSD+DW P R
Sbjct: 1233 AVSKLAQYSSAPTDIHLQALHKILRYLKGTIGQGLFYGADTNFDLRGFSDSDWQTCPDTR 1292
Query: 1233 KSTTGYCVFLGGNLISWKSKKQNVVARSSAEAEYRAMAQTT--CMWVGQILSEMGIERIS 1290
+ TG+ +F+G +L+SW+SKKQ+VV+ SSAEAEYRAM+ T +W+G IL+ I
Sbjct: 1293 RCVTGFAIFVGNSLVSWRSKKQDVVSMSSAEAEYRAMSVATKELIWLGYILTAFKIPFTH 1352
Query: 1291 PMKLWCDNQAALHISSNPVFHERTKHIEVDCHFIREKLQQNLISTSYVRTGDQLADVFTK 1350
P L+CDN+AALHI++N VFHERTKHIE DCH +RE ++ ++ T +VRT +QLAD TK
Sbjct: 1353 PAYLYCDNEAALHIANNSVFHERTKHIENDCHKVRECIEAGILKTIFVRTDNQLADTLTK 1412
Query: 1351 ALNGVRNDFICNKLGMINIY 1370
L +KLG++NIY
Sbjct: 1413 PLYPKPFRENNSKLGLLNIY 1432
>UniRef100_Q9SA17 F28K20.17 protein [Arabidopsis thaliana]
Length = 1415
Score = 716 bits (1848), Expect = 0.0
Identities = 446/1354 (32%), Positives = 702/1354 (50%), Gaps = 136/1354 (10%)
Query: 53 WKMDDKRILALLVNSVDKRTQSVITHCQTVKELWEFLQFIFGKADNLNRIYALLQ*IFRP 112
W D+ + + L ++ + + + T +++W L F K+ ++ R ++L Q +
Sbjct: 76 WFCTDQLVRSWLFGTLSEEVLGHVHNLSTSRQIWVSLAENFNKS-SVAREFSLRQNLQLL 134
Query: 113 KQDKRKLMDYFLEFKKYAEELTSLLSCKTKEDMLAQQKKLIALSWLSGLDQEFEVVRSQI 172
+ ++ Y EFK + L+S+ + + +L+GL ++++ + + I
Sbjct: 135 SKKEKPFSVYCREFKTICDALSSIGK--------PVDESMKIFGFLNGLGRDYDPITTVI 186
Query: 173 ---LSSKQVDTLTDVFSRVMQ-----SSFEK-----PKPAPDVDTSDRSALAAHSGFRG- 218
LS T DV S V S+E+ P A +++ S+ + + +G
Sbjct: 187 QSSLSKLPTPTFNDVVSEVQGFDSKLQSYEEAASVTPHLAFNIERSESGSPQYNPNQKGR 246
Query: 219 GRGGGRGGRGGARGRGGRFGQIQ-----------CYSCGELGHYKN*CPNSQQHQQHFQQ 267
GR G GRGG RG F Q Q C CG GH C N
Sbjct: 247 GRSGQNKGRGGYSTRGRGFSQHQSSPQVSGPRPVCQICGRTGHTALKCYN---------- 296
Query: 268 SAPNRFANNVSQSDVIQTQPEKRTVVMSDDEFARYTQFQISQQSASPSSSTATFVQTGNP 327
RF NN Q+++ T+ +SDD
Sbjct: 297 ----RFDNNY-QAEIQAFS----TLRVSDD------------------------------ 317
Query: 328 TVCLSSTSRRWIIDSGATNHMTGDSGIFLSFSSSSIHSSVTLADGSIVRVKGSGCTTPVS 387
T + W DS AT H+T + S + +V + DG+ + + +G TT S
Sbjct: 318 ------TGKEWHPDSAATAHVTSSTNGLQSATEYEGDDAVLVGDGTYLPITHTGSTTIKS 371
Query: 388 T---LPMSSVLYLPQFPCNLLSISKITRSLKCSVTFFPDSCVFQDLSTQRIIGRGRESDG 444
+ +P++ VL +P +LLS+SK+ C V F + DL TQ+++ G +G
Sbjct: 372 SNGKIPLNEVLVVPNIQKSLLSVSKLCDDYPCGVYFDANKVCIIDLQTQKVVTTGPRRNG 431
Query: 445 LYLLDEGVSKASTAYRTSSVSPFQLHCRLGHPSLGVLRKLCPQLESLSNFS-----CESC 499
LY+L+ A + R + + H RLGH + L+ L N S CE C
Sbjct: 432 LYVLENQEFVALYSNRQCAATEEVWHHRLGHANSKALQHLQNSKAIQINKSRTSPVCEPC 491
Query: 500 QFAKHHRSVYLPRLNKRAMSLFHIVHSDVWGPCPVTSKLGYKYFVTFVDDYSRATWLYLM 559
Q K R +L + R + +H D+WGP PV S G KY+ FVDDYSR +W Y +
Sbjct: 492 QMGKSSRLPFLIS-DSRVLHPLDRIHCDLWGPSPVVSNQGLKYYAIFVDDYSRYSWFYPL 550
Query: 560 KSRSELFTIFCNFCAEIRTQFNCPIHILRSDNAKEYFSAPFRTFMDKHGMIHQSSCIVTP 619
++SE ++F +F + Q N I + +SD E+ S +T + +HG+ H+ SC TP
Sbjct: 551 HNKSEFLSVFISFQKLVENQLNTKIKVFQSDGGGEFVSNKLKTHLSEHGIHHRISCPYTP 610
Query: 620 QQNGVAERKNRHLMEVAQALMFQMKVPKCFWADAVLTAAYLINRMPSTVLNGVIPYSVLF 679
QQNG+AERK+RHL+E+ +++F P+ FW ++ TA Y+INR+PS+VL + PY LF
Sbjct: 611 QQNGLAERKHRHLVELGLSMLFHSHTPQKFWVESFFTANYIINRLPSSVLKNLSPYEALF 670
Query: 680 ---PSCSLFPLPPKVFGCTCFVLDVRPQV-TKLDPKSLKCVFLGYSRTQKGYRCFSPALG 735
P S +VFG C+ +RP K DP+SL+CVFLGY+ KGYRCF P G
Sbjct: 671 GEKPDYSSL----RVFGSACYPC-LRPLAQNKFDPRSLQCVFLGYNSQYKGYRCFYPPTG 725
Query: 736 RYLVSADVTFFEDC-----SFSGWLPS-SFPVCES-EDTFLTYITTSPAP--------QT 780
+ +S +V F E + +P S P+ ++ + ++ I+ AP
Sbjct: 726 KVYISRNVIFNESELPFKEKYQSLVPQYSTPLLQAWQHNKISEISVPAAPVQLFSKPIDL 785
Query: 781 TTGTGFQFYEKTYSRRPKSSAPPPDTQSLPSIPLVSSDPHDNLDLPIALRKGKRTCSYPI 840
T G Q E+ P S+ D + P ++++ ++ + K P
Sbjct: 786 NTYAGSQVTEQLTDPEPTSNNEGSDEEVNPVAEEIAANQEQVINSHAMTTRSKAGIQKPN 845
Query: 841 SSYVTSNKLSPASKSFVAALDSVSVPKSLSDALSHAGWRQAMEEEMLALEHNATWDLVPL 900
+ Y + + + + + PK+L+ A+ H GW +A+ EE+ + TW LVP
Sbjct: 846 TRY-----------ALITSRMNTAEPKTLASAMKHPGWNEAVHEEINRVHMLHTWSLVPP 894
Query: 901 PAGKQVVGCKWVYTTKVNPDGSLARLKARLVAKGYAQTYGVDYTDTFSPVAKLSSVRILI 960
++ KWV+ TK++PDGS+ +LKARLVAKG+ Q GVDY +TFSPV + +++R+++
Sbjct: 895 TDDMNILSSKWVFKTKLHPDGSIDKLKARLVAKGFDQEEGVDYLETFSPVVRTATIRLVL 954
Query: 961 SLAATNHWPLFQLDVKNAFLHGDLQDEVYMEQPPGFVAQGECGKVCRLKKSLYGLKQSPR 1020
++ + WP+ QLDV NAFLHG+LQ+ V+M QP GF+ + VCRL K++YGLKQ+PR
Sbjct: 955 DVSTSKGWPIKQLDVSNAFLHGELQEPVFMYQPSGFIDPQKPTHVCRLTKAIYGLKQAPR 1014
Query: 1021 SWFGRFSDVVMEFGLRRSESDHTVFFKQTNKGCILLVVYVDDIVITGSDSEGIGNLKTFL 1080
+WF FS+ ++++G S+SD ++F + + L++YVDDI++TGSD + +L L
Sbjct: 1015 AWFDTFSNFLLDYGFVCSKSDPSLFVCHQDGKILYLLLYVDDILLTGSDQSLLEDLLQAL 1074
Query: 1081 QMKFQTKDLGILKYFLGIEVVYSKNGIMISQRKYVLDMLAETGLMGSKPCETPMEPGMKL 1140
+ +F KDLG +YFLGI++ NG+ + Q Y D+L + G+ P TP+ P
Sbjct: 1075 KNRFSMKDLGPPRYFLGIQIEDYANGLFLHQTAYATDILQQAGMSDCNPMPTPL-PQQLD 1133
Query: 1141 TAEGVPFSDPQQYRRLVGKLNYLTVTRPDIAFPVSVVSQFMSSPTDAHWEALIRIVKYLK 1200
F++P +R L GKL YLT+TRPDI F V+ + Q M SPT + + L RI++Y+K
Sbjct: 1134 NLNSELFAEPTYFRSLAGKLQYLTITRPDIQFAVNFICQRMHSPTTSDFGLLKRILRYIK 1193
Query: 1201 KAPGRGIVYRDHGHMRVEAFSDADWAGSPMDRKSTTGYCVFLGGNLISWKSKKQNVVARS 1260
G G+ + + + + A+SD+D AG R+STTG+C+ LG NLISW +K+Q V+ S
Sbjct: 1194 GTIGMGLPIKRNSTLTLSAYSDSDHAGCKNTRRSTTGFCILLGSNLISWSAKRQPTVSNS 1253
Query: 1261 SAEAEYRAM--AQTTCMWVGQILSEMGIERISPMKLWCDNQAALHISSNPVFHERTKHIE 1318
S EAEYRA+ A W+ +L ++GI + P +++CDN +A+++S+NP H R+KH +
Sbjct: 1254 STEAEYRALTYAAREITWISFLLRDLGIPQYLPTQVYCDNLSAVYLSANPALHNRSKHFD 1313
Query: 1319 VDCHFIREKLQQNLISTSYVRTGDQLADVFTKAL 1352
D H+IRE++ LI T ++ QLADVFTK+L
Sbjct: 1314 TDYHYIREQVALGLIETQHISATFQLADVFTKSL 1347
>UniRef100_Q94KV0 Polyprotein [Arabidopsis thaliana]
Length = 1453
Score = 712 bits (1837), Expect = 0.0
Identities = 453/1354 (33%), Positives = 691/1354 (50%), Gaps = 110/1354 (8%)
Query: 53 WKMDDKRILALLVNSVDKRTQSVITHCQTVKELWEFLQFIFGKAD-----NLNRIYALLQ 107
W D+ I + L ++ + + + QT +++W L F K+ L R LL
Sbjct: 76 WFCTDQLIRSWLFGTLSEEVLGYVHNLQTSRDIWISLAENFNKSSVAREFTLRRTLQLLS 135
Query: 108 *IFRPKQDKRKLMDYFLEFKKYAEELTSLLSCKTKEDMLAQQKKLIALSWLSGLDQEFEV 167
K+DK L Y EF + L+S+ + + +L+GL +E++
Sbjct: 136 -----KKDKT-LSAYCREFIAVCDALSSIGK--------PVDESMKIFGFLNGLGREYDP 181
Query: 168 VRSQI---LSSKQVDTLTDVFSRV------MQSSFEKPKPAPDVDTSDRSALAAHSGFRG 218
+ + I LS T DV S V +QS E P + + + + + G
Sbjct: 182 ITTVIQSSLSKISPPTFRDVISEVKGFDVKLQSYEESVTANPHMAFNTQRSEYTDNYTSG 241
Query: 219 GRGGGRGGRGGARGRGGRFGQIQCYSCGELGHYKN*CPNSQQHQQHFQQSAPNRFANNVS 278
RG GRGG G RGR G YS G QHQ + +NN
Sbjct: 242 NRGKGRGGYGQNRGRSG-------YSTRGRGF--------SQHQTN---------SNNTG 277
Query: 279 QSDVIQTQPEKRTVVMSDDEFARYTQFQISQQSASPSSSTATFVQTGNPTVCLSSTSRRW 338
+ V Q + Y +F + QS + + ++ + S+ + W
Sbjct: 278 ERPVCQICGRTGHTALKC-----YNRFDHNYQSVDTAQAFSSLRVS-------DSSGKEW 325
Query: 339 IIDSGATNHMTGDSGIFLSFSSSSIHSSVTLADGSIVRVKGSGCTTPVS---TLPMSSVL 395
+ DS AT H+T + + S + +V + DG+ + + G TT S TLP++ VL
Sbjct: 326 VPDSAATAHVTSSTNNLQAASPYNGSDTVLVGDGAYLPITHVGSTTISSDSGTLPLNEVL 385
Query: 396 YLPQFPCNLLSISKITRSLKCSVTFFPDSCVFQDLSTQRIIGRGRESDGLYLLDEGVSKA 455
P +LLS+SK+ C V F + D++TQ+++ +G S+GLY+L+ A
Sbjct: 386 VCPDIQKSLLSVSKLCDDYPCGVYFDANKVCIIDINTQKVVSKGPRSNGLYVLENQEFVA 445
Query: 456 STAYRTSSVSPFQLHCRLGHPSLGVLRKLCPQLESLSNFS-----CESCQFAKHHRSVYL 510
+ R + S H RLGH + +L++L E N S CE CQ K + +
Sbjct: 446 FYSNRQCAASEEIWHHRLGHSNSRILQQLKSSKEISFNKSRMSPVCEPCQMGKSSKLQFF 505
Query: 511 PRLNKRAMSLFHIVHSDVWGPCPVTSKLGYKYFVTFVDDYSRATWLYLMKSRSELFTIFC 570
N R + L +H D+WGP PV SK G+KY+V FVDDYSR +W Y +K++S+ F +F
Sbjct: 506 SS-NSRELDLLGRIHCDLWGPSPVVSKQGFKYYVVFVDDYSRYSWFYPLKAKSDFFAVFV 564
Query: 571 NFCAEIRTQFNCPIHILRSDNAKEYFSAPFRTFMDKHGMIHQSSCIVTPQQNGVAERKNR 630
F + QFN I + +SD E+ S + + G+ H+ SC TPQQNG+AERK+R
Sbjct: 565 AFQNLVENQFNTKIKVFQSDGGGEFTSNLMKKHLTDCGIQHRISCPYTPQQNGIAERKHR 624
Query: 631 HLMEVAQALMFQMKVPKCFWADAVLTAAYLINRMPSTVLNGVIPYSVLFPSCSLFPLPPK 690
H +E+ ++MF P FW +A TA++L N +PS L V P L + + +
Sbjct: 625 HFVELGLSMMFHSHTPLQFWVEAFFTASFLSNMLPSPSLGNVSPLEALLKQKPNYAML-R 683
Query: 691 VFGCTCFVLDVRPQVT-KLDPKSLKCVFLGYSRTQKGYRCFSPALGRYLVSADVTF---- 745
VFG C+ +RP K +P+SL+CVFLGY+ KGYRC P GR +S V F
Sbjct: 684 VFGTACYPC-LRPLGEHKFEPRSLQCVFLGYNSQYKGYRCLYPPTGRVYISRHVIFDEET 742
Query: 746 -------------FEDCSFSGWLPSSFP------VCESEDTFLTYITTSPAPQ------T 780
+E S W SS P + ++E+ + + P+ Q T
Sbjct: 743 FPFKQKYQFLVPQYESSLLSAW-QSSIPQADQSLIPQAEEGKIESLAKPPSIQKNTIQDT 801
Query: 781 TTGTGFQFYEKTYSRRPKSSAPPPDTQSLPSIPLVSSDPHDNLDLPIALRKGKRTCSYPI 840
TT + S +T+SL +D + ++ + T
Sbjct: 802 TTQPAILTEGVLNEEEEEDSFEETETESLNEETHTQNDEAEVTVEEEVQQEPENTHPMTT 861
Query: 841 SSYVTSNKLSPASKSFVAALDSVSVPKSLSDALSHAGWRQAMEEEMLALEHNATWDLVPL 900
S +K S + + + SV PKS+ +AL+H GW A+ +EM + TW LV
Sbjct: 862 RSKAGIHK-SNTRYALLTSKFSVEEPKSIDEALNHPGWNNAVNDEMRTIHMLHTWSLVQP 920
Query: 901 PAGKQVVGCKWVYTTKVNPDGSLARLKARLVAKGYAQTYGVDYTDTFSPVAKLSSVRILI 960
++GC+WV+ TK+ PDGS+ +LKARLVAKG+ Q G+DY +TFSPV + +++R+++
Sbjct: 921 TEDMNILGCRWVFKTKLKPDGSVDKLKARLVAKGFHQEEGLDYLETFSPVVRTATIRLVL 980
Query: 961 SLAATNHWPLFQLDVKNAFLHGDLQDEVYMEQPPGFVAQGECGKVCRLKKSLYGLKQSPR 1020
+A W + QLDV NAFLHG+L++ VYM QPPGFV Q + VCRL K+LYGLKQ+PR
Sbjct: 981 DVATAKGWNIKQLDVSNAFLHGELKEPVYMLQPPGFVDQEKPSYVCRLTKALYGLKQAPR 1040
Query: 1021 SWFGRFSDVVMEFGLRRSESDHTVFFKQTNKGCILLVVYVDDIVITGSDSEGIGNLKTFL 1080
+WF S+ +++FG S+SD ++F N ++L++YVDDI++TGSD + L L
Sbjct: 1041 AWFDTISNYLLDFGFSCSKSDPSLFTYHKNGKTLVLLLYVDDILLTGSDHNLLQELLMSL 1100
Query: 1081 QMKFQTKDLGILKYFLGIEVVYSKNGIMISQRKYVLDMLAETGLMGSKPCETPMEPGMKL 1140
+F KDLG YFLG+E+ S G+ + Q Y D+L + + TP+ ++
Sbjct: 1101 NKRFSMKDLGAPSYFLGVEIESSPEGLFLHQTAYAKDILHQAAMSNCNSMPTPLPQHIEN 1160
Query: 1141 TAEGVPFSDPQQYRRLVGKLNYLTVTRPDIAFPVSVVSQFMSSPTDAHWEALIRIVKYLK 1200
+ F +P +R L GKL YLT+TRPDI F V+ + Q M SPT A + L RI++Y+K
Sbjct: 1161 LNSDL-FPEPTYFRSLAGKLQYLTITRPDIQFAVNFICQRMHSPTTADFGLLKRILRYVK 1219
Query: 1201 KAPGRGIVYRDHGHMRVEAFSDADWAGSPMDRKSTTGYCVFLGGNLISWKSKKQNVVARS 1260
G+ + + ++ + A+SD+DWAG R+STTG+C LG NLISW +K+Q V++S
Sbjct: 1220 GTIHLGLHIKKNQNLSLVAYSDSDWAGCKETRRSTTGFCTLLGCNLISWSAKRQETVSKS 1279
Query: 1261 SAEAEYRAMAQTT--CMWVGQILSEMGIERISPMKLWCDNQAALHISSNPVFHERTKHIE 1318
S EAEYRA+ W+ +L ++G+ + P + CDN +A+++S+NP H R+KH +
Sbjct: 1280 STEAEYRALTAVAQELTWLSFLLRDIGVTQTHPTLVKCDNLSAVYLSANPALHNRSKHFD 1339
Query: 1319 VDCHFIREKLQQNLISTSYVRTGDQLADVFTKAL 1352
D H+IRE++ L+ T ++ QLAD+FTK L
Sbjct: 1340 TDYHYIREQVALGLVETKHISATLQLADIFTKPL 1373
>UniRef100_O23302 Retrovirus-related like polyprotein [Arabidopsis thaliana]
Length = 1489
Score = 695 bits (1794), Expect = 0.0
Identities = 478/1520 (31%), Positives = 729/1520 (47%), Gaps = 295/1520 (19%)
Query: 18 NYVEWKYLVAVSLGGMGKDEHLTGSC---PTNATAAAKWKMDDKRILALLVNSVDKRTQS 74
++ W+ + ++L K + G+ P + W + + L+NSVDK+
Sbjct: 56 DFHSWRRSILMALNVRNKLGFINGTITKPPEDHRDFGAWSRCNDIVSTWLMNSVDKKIGQ 115
Query: 75 VITHCQTVKELWEFLQFIFGKADNLNRIYALLQ*IFRPKQDKRKLMDYFL-------EFK 127
+ + TV+ +W L F K D+ RI+ + Q + + +Q + Y+ E +
Sbjct: 116 SLLYIATVQGIWNNLLSRF-KQDDAPRIFDIEQKLSKIEQGSMDISTYYTALLTLWEEHR 174
Query: 128 KYAE-ELTSLLSCK----TKEDMLAQQKKLIALSWLSGLDQEFEVVRSQILSSKQVDTLT 182
Y E + + C+ K + L Q+ ++ +L L++ F+ R IL K + T+
Sbjct: 175 NYVELPVCTCGRCECDAAVKWEHLQQRSRV--TKFLKELNEGFDQTRRHILMLKPIPTIK 232
Query: 183 DVFSRVMQSSFEK-PKPAPDVDT-----------SDRSALAAHSGFRGGRGGGRGGRGGA 230
+ F+ V Q ++ KP VD+ + + +AA++ R +
Sbjct: 233 EAFNMVTQDERQRNVKPLTRVDSVAFQNTSMINEDENAYVAAYNTVRPNQ---------- 282
Query: 231 RGRGGRFGQIQCYSCGELGHYKN*C--------------------PNSQQHQQHFQQSAP 270
+ C CG++GH C PN Q H Q P
Sbjct: 283 --------KPICTHCGKVGHTIQKCYKVHGYPPGMKTGNTGYTYKPNPQLHVQPRMPMMP 334
Query: 271 --------NRFANNVSQSDVIQTQPEKRTVVMSD--------DEFARYTQFQIS------ 308
+ N++ +++V+ + S+ + + Y I+
Sbjct: 335 QPRMQFPAQPYTNSMQKANVVAQVYAETGAYPSEGYSQAPMMNPYGSYPMPHITHGGNNL 394
Query: 309 -------QQSASPSSSTATFVQTGNPTVCLSSTSRRWIIDSGATNHMTGDSGIFLSFSSS 361
QQ S VQ P S+ S + +T SG + F S+
Sbjct: 395 SLQDFTPQQIEQMISQFQAQVQVPEPAASSSNPSPLATVSEHGFMALTSTSGTIIPFPST 454
Query: 362 SIH-------------------------------SSVTLADGSIVR--VKGSGCTTPVST 388
S+ SS +D ++ R SG
Sbjct: 455 SLKYENNDLKFQNHTLSALQKFLPSDAWIIDSGASSHVCSDLAMFRELKSVSGTVHITQK 514
Query: 389 LPMSSVLYLPQFPCNLLSISKITRSLKCSVTFFPDSCVFQDLSTQRIIGRGRESDGLYLL 448
L + +VL++P F NL+S+S + +++ CS F+ D C+ Q+LS +IGRGR LY+L
Sbjct: 515 LILHNVLHVPDFKFNLMSVSSLVKTISCSAHFYVDCCLIQELSQGLMIGRGRLYHNLYIL 574
Query: 449 DEGVSKASTA------YRTSSVSPFQL-HCRLGHPSLGVLRKLCPQLESLSNFSCESCQF 501
+ + ST+ + S ++ L H RLGHPS VL+KL
Sbjct: 575 ETENTSPSTSTPAACLFTGSVLNDGHLWHQRLGHPSSVVLQKL----------------- 617
Query: 502 AKHHRSVYLPRLNKRAMSLFHIVHSDVWGPCPVTSKLGYKYFVTFVDDYSRATWLYLMKS 561
R Y+ N A + F +VH D+WGP + S G++YF+T VDD +R TW+Y++++
Sbjct: 618 ---KRLAYISH-NNLASNPFDLVHLDIWGPFSIESIEGFRYFLTVVDDCTRTTWVYMLRN 673
Query: 562 RSELFTIFCNFCAEIRTQFNCPIHILRSDNAKEYFSAPFRTFMDKHGMIHQSSCIVTPQQ 621
+ ++ ++F F + TQFN I +RSDNA E F + +HGM+H SC TPQQ
Sbjct: 674 KKDVSSVFPEFIKLVSTQFNAKIKAIRSDNAPE---LGFTEIVKEHGMLHHFSCAYTPQQ 730
Query: 622 NGVAERKNRHLMEVAQALMFQMKVPKCFWADAVLTAAYLINRMPSTVLNGVIPYSVLF-- 679
N V ERK++H++ VA+AL+FQ +P +W+D V TA +LINR+PS +LN PY ++
Sbjct: 731 NSVVERKHQHILNVARALLFQSNIPMQYWSDCVTTAVFLINRLPSPLLNNKSPYELILNK 790
Query: 680 -PSCSLFPLPPKVFGCTCFVLDVRPQVTKLDPKSLKCVFLGYSRTQKGYRCFSPALGRYL 738
P SL K FGC CFV + TK P++ CVFLGY KGY+
Sbjct: 791 QPDYSLL----KNFGCLCFVSTNAHERTKFTPRARACVFLGYPSGYKGYKVLDLESHSVT 846
Query: 739 VSADVTFFEDCSFSGWLPSSFPVCESE------DTFLTYITTSPAP-------------- 778
VS +V F E FP SE D F I PAP
Sbjct: 847 VSRNVVFKEHV---------FPFKTSELLNKAVDMFPNSILPLPAPLHFVETMPLIDEDS 897
Query: 779 --QTTTGTGFQFYEKTYSRRPKSSAPPP----DTQSLPS--------------------- 811
TTT + + S S PP +TQ + S
Sbjct: 898 LIPTTTDSRTADNHASSSSSALPSIIPPSSNTETQDIDSNAVPITRSKRTTRAPSYLSEY 957
Query: 812 ----IPLVSSDPHDNLDLPI-------ALRKGKRTCSYPISSYVTSNKLSPASKSFVAAL 860
+P +S+ P + +PI K+T YPIS+ V+ +K +P +S++ A
Sbjct: 958 HCSLVPSISTLPPTDSSIPIHPLPEIFTASSPKKTTPYPISTVVSYDKYTPLCQSYIFAY 1017
Query: 861 DSVSVPKSLSDALSHAGWRQAMEEEMLALEHNATWDLVPLPAGKQVVGCKWVYTTKVNPD 920
++ + PK+ S A+ W + EE+ A+E N TW + LP K VVGCKWV+T K NPD
Sbjct: 1018 NTETEPKTFSQAMKSEKWIRVAVEELQAMELNKTWSVESLPPDKNVVGCKWVFTIKYNPD 1077
Query: 921 GSLARLKARLVAKGYAQTYGVDYTDTFSPVAKLSSVRILISLAATNHWPLFQLDVKNAFL 980
G++ R KARLVA+G+ Q G+D+ DTFSPVAKL+S ++++ LAA W L Q+DV +AFL
Sbjct: 1078 GTVERYKARLVAQGFTQQEGIDFLDTFSPVAKLTSAKMMLGLAAITGWTLTQMDVSDAFL 1137
Query: 981 HGDLQDEVYMEQPPGFVAQGEC----GKVCRLKKSLYGLKQSPRSWFGRFSDVVMEFGLR 1036
HGDL +E++M P G+ VCRL KS+YGLKQ+ R W+ RF
Sbjct: 1138 HGDLDEEIFMSLPQGYTPPAGTILPPNPVCRLLKSIYGLKQASRQWYKRF---------- 1187
Query: 1037 RSESDHTVFFKQTNKGCILLVVYVDDIVITGSDSEGIGNLKTFLQMKFQTKDLGILKYFL 1096
+ +VY+DDI+I ++ + NLK L+ +F+ KDLG ++FL
Sbjct: 1188 -----------------VAALVYIDDIMIASNNDAEVENLKALLRSEFKIKDLGPARFFL 1230
Query: 1097 GIEVVYSKNGIMISQRKYVLDMLAETGLMGSKPCETPMEPGMKLTAE-GVPFSDPQQYRR 1155
GL+G KP PM+P + L + G P +P YR+
Sbjct: 1231 --------------------------GLLGCKPSSIPMDPTLHLVRDMGTPLPNPTAYRK 1264
Query: 1156 LVGKLNYLTVTRPDIAFPVSVVSQFMSSPTDAHWEALIRIVKYLKKAPGRGIVYRDHGHM 1215
L+G+L YLT+TRPDI + V +SQF+S+P+D H +A ++++Y+K PG+G++Y +
Sbjct: 1265 LIGRLLYLTITRPDITYAVHQLSQFISAPSDIHLQAAHKVLRYIKANPGQGLMYSADYEI 1324
Query: 1216 RVEAFSDADWAGSPMDRKSTTGYCVFLGGNLISWKSKKQNVVARSSAEAEYRAMAQTTC- 1274
+ FSDADWA R+S +G+C++LG +LISWKSKKQ V +RSS E+EYR+MAQ TC
Sbjct: 1325 CLNGFSDADWAACKDTRRSISGFCIYLGTSLISWKSKKQAVASRSSTESEYRSMAQATCE 1384
Query: 1275 -MWVGQILSEMGIERISPMKLWCDNQAALHISSNPVFHERTKHIEVDCHFIREKLQQNLI 1333
+W+ Q+L ++ I P KL+CDN++ALH S NPVFHERTKHIE+DCH +R++++ +
Sbjct: 1385 IIWLQQLLKDLHIPLTCPAKLFCDNKSALHSSLNPVFHERTKHIEIDCHTVRDQIKAGNL 1444
Query: 1334 STSYVRTGDQLADVFTKALN 1353
+V T +Q AD+ TKAL+
Sbjct: 1445 KALHVPTENQHADILTKALH 1464
>UniRef100_Q9SLF0 Putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1333
Score = 693 bits (1789), Expect = 0.0
Identities = 407/1051 (38%), Positives = 583/1051 (54%), Gaps = 56/1051 (5%)
Query: 367 VTLADGSIVRVKGSGCTTPVSTLPMSSVLYLPQFPCNLLSISKITRSLKCSVTFFPDSCV 426
+ LADG G S L M SV Y+ +F +L+SI ++ +C + V
Sbjct: 291 IVLADGRERISVKEGTVRLGSNLVMISVFYVEEFQSDLISIGQLMDENRCVLQMSDRFLV 350
Query: 427 FQDLSTQRIIGRGRESDGLYLLDEGVSKASTAYRTSSVSPFQL-HCRLGHPSLGVLRKLC 485
QD +++ ++G GR G + AS + ++L H R+GHP+ V+ +
Sbjct: 351 VQDRTSRMVMGAGRRVGGTFHFRSTEIAASVTVKEEK--NYELWHSRMGHPAARVVSLIP 408
Query: 486 PQLESLS----NFSCESCQFAKHHRSVYLPRLNKRAMSLFHIVHSDVWGPCPVTSKLGYK 541
S+S N +C+ C AK R+ + +NK + +F +++ D+WGP S G +
Sbjct: 409 ESSVSVSSTHLNKACDVCHRAKQTRNSFPLSINK-TLRIFELIYCDLWGPYRTPSHTGAR 467
Query: 542 YFVTFVDDYSRATWLYLMKSRSELFTIFCNFCAEIRTQFNCPIHILRSDNAKEYFSAPFR 601
YF+T +DDYSR WLYL+ +SE NF A QFN I +RSDN E+
Sbjct: 468 YFLTIIDDYSRGVWLYLLNDKSEAPCHLKNFFAMTDRQFNVKIKTVRSDNGTEFLC--LT 525
Query: 602 TFMDKHGMIHQSSCIVTPQQNGVAERKNRHLMEVAQALMFQMKVPKCFWADAVLTAAYLI 661
F + G+IH+ SC+ TP++N ERK+RHL+ VA+AL FQ +P FW + VLTAAYLI
Sbjct: 526 KFFQEQGVIHERSCVATPERNDRVERKHRHLLNVARALRFQANLPIQFWGECVLTAAYLI 585
Query: 662 NRMPSTVLNGVIPYSVLFPSCSLFPLPPKVFGCTCFVLDVRPQVTKLDPKSLKCVFLGYS 721
NR PS+VLN PY L F +VFG C+ + K +S +CVF+GY
Sbjct: 586 NRTPSSVLNDSTPYERLHKKQPRFD-HLRVFGSLCYAHNRNRGGDKFAERSRRCVFVGYP 644
Query: 722 RTQKGYRCFSPALGRYLVSADVTFFEDCSFSGWLPSSFPVCESEDTFLTYI--------- 772
QKG+R F + VS DV F E F + V E E+ L
Sbjct: 645 HGQKGWRLFDLEQNEFFVSRDVVFSE-LEFPFRISHEQNVIEEEEEALWAPIVDGLIEEE 703
Query: 773 -----TTSPAPQTTTGTGFQFYEKTYSRRPKSSAPPPDTQSLPSIPLVSSDPHDNLDLP- 826
P P + T SR S++ P DT+ +P+ P S+ + P
Sbjct: 704 VHLGQNAGPTPPICVSSPIS-PSATSSRSEHSTSSPLDTEVVPT-PATSTTSASSPSSPT 761
Query: 827 ----IALRKGKRTCSYPISSYV--------TSNKLSPAS-KSFV----------AALDSV 863
+ L + K T + ++ T NK P + K FV + L+S+
Sbjct: 762 NLQFLPLSRAKPTTAQAVAPPAVPPPRRQSTRNKAPPVTLKDFVVNTTVCQESPSKLNSI 821
Query: 864 SVPKSLSDALSHAGWRQAMEEEMLALEHNATWDLVPLPAGKQVVGCKWVYTTKVNPDGSL 923
D + A E N TW + LP GK+ +G +WVY K N DGS+
Sbjct: 822 LYQLQKRDDTRRFSASHTTYVAIDAQEENHTWTIEDLPPGKRAIGSQWVYKVKHNSDGSV 881
Query: 924 ARLKARLVAKGYAQTYGVDYTDTFSPVAKLSSVRILISLAATNHWPLFQLDVKNAFLHGD 983
R KARLVA G Q G DY +TF+PVAK+++VR+ + +A +W + Q+DV NAFLHGD
Sbjct: 882 ERYKARLVALGNKQKEGEDYGETFAPVAKMATVRLFLDVAVKRNWEIHQMDVHNAFLHGD 941
Query: 984 LQDEVYMEQPPGFVAQGECGKVCRLKKSLYGLKQSPRSWFGRFSDVVMEFGLRRSESDHT 1043
L++EVYM+ PPGF A KVCRL+K+LYGLKQ+PR WF + + + +G ++S +D++
Sbjct: 942 LREEVYMKLPPGFEASHP-NKVCRLRKALYGLKQAPRCWFEKLTTALKRYGFQQSLADYS 1000
Query: 1044 VFFKQTNKGCILLVVYVDDIVITGSDSEGIGNLKTFLQMKFQTKDLGILKYFLGIEVVYS 1103
+F I +++YVDD++ITG+ K +L F KDLG LKYFLGIEV S
Sbjct: 1001 LFTLVKGSVRIKILIYVDDLIITGNSQRATQQFKEYLASCFHMKDLGPLKYFLGIEVARS 1060
Query: 1104 KNGIMISQRKYVLDMLAETGLMGSKPCETPMEPGMKLTAEGVPF-SDPQQYRRLVGKLNY 1162
GI I QRKY LD+++ETGL+G KP P+E KL P +DPQ+YRRLVG+L Y
Sbjct: 1061 TTGIYICQRKYALDIISETGLLGVKPANFPLEQNHKLGLSTSPLLTDPQRYRRLVGRLIY 1120
Query: 1163 LTVTRPDIAFPVSVVSQFMSSPTDAHWEALIRIVKYLKKAPGRGIVYRDHGHMRVEAFSD 1222
L VTR D+AF V ++++FM P + HW A +R+V+YLK PG+G+ R G ++ + D
Sbjct: 1121 LAVTRLDLAFSVHILARFMQEPREDHWAAALRVVRYLKADPGQGVFLRRSGDFQITGWCD 1180
Query: 1223 ADWAGSPMDRKSTTGYCVFLGGNLISWKSKKQNVVARSSAEAEYRAMA--QTTCMWVGQI 1280
+DWAG PM R+S TGY V G + ISWK+KKQ+ V++SSAEAEYRAM+ + +W+ Q+
Sbjct: 1181 SDWAGDPMSRRSVTGYFVQFGDSPISWKTKKQDTVSKSSAEAEYRAMSFLASELLWLKQL 1240
Query: 1281 LSEMGIERISPMKLWCDNQAALHISSNPVFHERTKHIEVDCHFIREKLQQNLISTSYVRT 1340
L +G+ + PM + CD+++A++I++NPVFHERTKHIE+D HF+R++ + +I+ +V T
Sbjct: 1241 LFSLGVSHVQPMIMCCDSKSAIYIATNPVFHERTKHIEIDYHFVRDEFVKGVITPRHVGT 1300
Query: 1341 GDQLADVFTKALNGVRNDFICNKLGMINIYA 1371
QLAD+FTK L KLG+ N+YA
Sbjct: 1301 TSQLADIFTKPLGRDCFSAFRIKLGIRNLYA 1331
>UniRef100_Q8S805 Putative copia-type polyprotein [Oryza sativa]
Length = 1803
Score = 667 bits (1720), Expect = 0.0
Identities = 461/1398 (32%), Positives = 686/1398 (48%), Gaps = 91/1398 (6%)
Query: 10 IKLDGDGENYVEWKYLVAVSLGGMGKDEHLTGSCPTNATAAAKWKMDDKRILALLVNSVD 69
+ LD D NY +W+ LG G + H+ P A+W+ D ++ L NS+
Sbjct: 38 VVLDLDVSNYSQWRCSFESVLGKFGLEAHVQEP-PALDLRTAEWRRADHCVVNWLHNSIA 96
Query: 70 KRTQSVITHCQ-TVKELWEFLQFIFGKADNLNRIYALLQ*IFRP-KQDKRKLMDYFLEFK 127
K V+ + + +W ++ +F DN + L+ FR Q + Y + K
Sbjct: 97 KNVFDVVYKPRASAFTVWSDIEGVF--RDNAVQRSVYLETEFRSINQGDMTITQYTAKLK 154
Query: 128 KYAEELTSLLSCKTKEDMLAQQKKLIALSWLSGLDQEFEVVRSQILSSKQVDTLTDVFSR 187
+ A+ L + +M + + L+ L GL+ +F +R+ I T S
Sbjct: 155 QLADGLRDI-------NMPVSEPSQV-LNLLRGLNTKFRSLRASIADRNPPHTFMTARSY 206
Query: 188 VMQSSFEKPKPAPDVDTSDRSALAAHSGFRGGRGGGRG-----GRGGARGRGGRFGQIQC 242
++ + + D AL A +G G G GRG RGRGG
Sbjct: 207 LLLAELQMQH---DAKAEAGEALYAGTGSSSGTSDTTGQPRPKGRGKRRGRGGGAPPGGA 263
Query: 243 YS-------CGELGHYKN*CPNSQQHQQHFQQSAPNRFANNVSQSDVIQTQP--EKRTVV 293
S G G + P F Q+ P F + V+ +P + + +
Sbjct: 264 PSTPGGGAGAGHDGQPRPPAPWGYNPWTGFVQAWP--FPFRAPGAGVLGPRPPFQAQQAM 321
Query: 294 MSDDEFARYTQFQISQQSASPSSSTATF--VQTGNPTVCLSSTSRRWIIDSGATNHMTGD 351
+ S ++A + +Q+ ++ W +D+GA+ HM+
Sbjct: 322 TAQHLLPALPPASPGVHSTGAWDNSALYSALQSAGVATTTPPSAADWFLDTGASAHMSST 381
Query: 352 SGIFLSFSSSSIHSSVTLADGSIVRVKGSGCT---TPVSTLPMSSVLYLPQFPCNLLSIS 408
GI S +T+ +G+ + V + T T + L + +VL P NL+S+
Sbjct: 382 PGILAHPRPLPFSSCITVGNGAKLPVTHTASTHIPTSSTDLHLHNVLVSPPLIKNLISVK 441
Query: 409 KITRSLKCSVTFFPDSCVFQDLSTQRIIGRGRESDGLYLLDEGVSKASTAYRTSSVSPFQ 468
K+TR S+ F P +DL TQ + R LY L A +A TSS S
Sbjct: 442 KLTRDNNVSIEFDPTGFSIKDLQTQVVKLRCDSPGDLYPLRLPSPHALSA--TSSPSVEH 499
Query: 469 LHCRLGHPSLGVLRKLCPQLESLSNFSCESCQFAKHHRS-------VYLPRLNKRAMSLF 521
H RLGHP L K+ L +F + + A HH S V LP + + +LF
Sbjct: 500 WHLRLGHPGSASLSKV------LGSFDFQCNKSAPHHCSACHVGTNVRLPFHSSSSQTLF 553
Query: 522 --HIVHSDVWGPCPVTSKLGYKYFVTFVDDYSRATWLYLMKSRSELFTIFCNFCAEIRTQ 579
+VH+DVW P+ S GYKY+V F+DD++ W + ++++SE+F +F A TQ
Sbjct: 554 PFQLVHTDVW-TSPIYSNSGYKYYVVFLDDFTHYIWTFPVRNKSEVFHTVRSFFAYAHTQ 612
Query: 580 FNCPIHILRSDNAKEYFSAPFRTFMDKHGMIHQSSCIVTPQQNGVAERKNRHLMEVAQAL 639
F P+ L++DN KEY S R+ + HG + + SC + QQNG AER R + + + +
Sbjct: 613 FGLPVLALQTDNGKEYDSYALRSLLSLHGAVLRLSCPYSSQQNGKAERILRTINDCVRTM 672
Query: 640 MFQMKVPKCFWADAVLTAAYLINRMPSTVLNGVIPYSVLFPSCSLFPLPP-----KVFGC 694
+ P FWA+A+ TA +LINR P + PY +L + PP +VFGC
Sbjct: 673 LVHSAAPLSFWAEALQTAMHLINRRPCRATGSLKPYQLLLGA------PPTYDHLRVFGC 726
Query: 695 TCFVLDVRPQVTKLDPKSLKCVFLGYSRTQKGYRCFSPALGRYLVSADVTFFEDCSFSGW 754
C+ + KL P+SL CVF+GY +GYRC+ R S VTF ED
Sbjct: 727 LCYPNTIATAPHKLSPRSLACVFIGYPADHRGYRCYDMVSRRVFTSRHVTFVEDVFPFRD 786
Query: 755 LPSSFPVC-----ESEDTFLTYITTSPAPQTTTGTGFQFYEKTYSRRPKSSAPPPDTQSL 809
PS P +DT + + +PA T G + +A PP S
Sbjct: 787 APSPRPSAPPPPDHGDDTIV--LLPAPAQHVVTPVG--------TAPAHDAASPPSPAS- 835
Query: 810 PSIPLVSSDPHDNLDLPIALRKGKRTCSYPISSYVTSNKLS---PASKSFVAALDSVS-V 865
S P ++ HD P + S P + T + P + + A ++S
Sbjct: 836 -STPSSAAPAHDVAPPPSPETSSPASASPPRHAMTTRARAGISKPNPRYAMTATSTLSPT 894
Query: 866 PKSLSDALSHAGWRQAMEEEMLALEHNATWDLVPLPAGKQVVGCKWVYTTKVNPDGSLAR 925
P S+ AL WR AM+ E AL N TW LVP P G +++ KWV+ TK++ DGSL +
Sbjct: 895 PSSVRVALRDPNWRAAMQAEFDALLANRTWTLVPRPPGARIITGKWVFKTKLHADGSLDK 954
Query: 926 LKARLVAKGYAQTYGVDYTDTFSPVAKLSSVRILISLAATNHWPLFQLDVKNAFLHGDLQ 985
KAR V +G+ Q GVD+ +TFSPV K +++R +++L ++ WP QLDV NAFLHG LQ
Sbjct: 955 YKARWVVRGFNQRPGVDFGETFSPVVKPATIRTVLTLISSKQWPAHQLDVSNAFLHGHLQ 1014
Query: 986 DEVYMEQPPGFVAQGECGKVCRLKKSLYGLKQSPRSWFGRFSDVVMEFGLRRSESDHTVF 1045
+ V +QP GF VC L +SLYGL+Q+PR+WF RF+D G +S +D ++F
Sbjct: 1015 ERVLCQQPTGFEDAARPADVCLLSRSLYGLRQAPRAWFKRFADHATSLGFVQSRADPSLF 1074
Query: 1046 FKQTNKGCILLVVYVDDIVITGSDSEGIGNLKTFLQMKFQTKDLGILKYFLGIEVVYSKN 1105
+ L++YVDD++++ S S + + LQ +F+ KD+G LKYFLGIEV + +
Sbjct: 1075 VLRRGSDTAYLLLYVDDMILSASSSSLLQRIIDRLQAEFKVKDMGPLKYFLGIEVQRTAD 1134
Query: 1106 GIMISQRKYVLDMLAETGLMGSKPCETPMEPGMKLTA-EGVPFSDPQQYRRLVGKLNYLT 1164
G ++SQ KY D+L G+ K TP + KL++ EG F D YR + G L YLT
Sbjct: 1135 GFVLSQSKYATDVLERAGMANCKAVATPADAKPKLSSDEGPLFQDSSWYRSIAGALQYLT 1194
Query: 1165 VTRPDIAFPVSVVSQFMSSPTDAHWEALIRIVKYLKKAPGRGIVYRDHGHMRVEAFSDAD 1224
+TRPDIA+ V V M +P +AH L RI++Y+K G+ R + AFSDAD
Sbjct: 1195 LTRPDIAYAVQQVCLHMHAPREAHVTLLKRILRYIKGTAAFGLHLRASTSPTLTAFSDAD 1254
Query: 1225 WAGSPMDRKSTTGYCVFLGGNLISWKSKKQNVVARSSAEAEYRAMAQTT--CMWVGQILS 1282
WAG P R+ST+G+C+FLG +LISW SK+Q V+RSSAEAEYR +A C W+ Q+L
Sbjct: 1255 WAGCPDTRRSTSGFCIFLGDSLISWSSKRQTTVSRSSAEAEYRGVANAVAECTWLRQLLG 1314
Query: 1283 EMGIERISPMKLWCDNQAALHISSNPVFHERTKHIEVDCHFIREKLQQNLISTSYVRTGD 1342
E+ +CDN +++++S NPV H+RTKHIE+D HF+REK+ + + +
Sbjct: 1315 ELHCRVPQATIAYCDNISSVYMSKNPVHHKRTKHIELDIHFVREKVALGELRVLPIPSAH 1374
Query: 1343 QLADVFTKAL-NGVRNDF 1359
Q ADVFTK L + + N+F
Sbjct: 1375 QFADVFTKGLPSSMFNEF 1392
>UniRef100_Q6L3N8 Putative gag-pol polyprotein [Solanum demissum]
Length = 1333
Score = 666 bits (1719), Expect = 0.0
Identities = 455/1405 (32%), Positives = 708/1405 (50%), Gaps = 154/1405 (10%)
Query: 16 GENYVEWKYLVAVSLGGMGKDEHL-----TGSCPTNATAAAKWKMDDKRILALLVNSVDK 70
GENY W ++ + + K + L TG NA + + D + L + ++D
Sbjct: 19 GENYQFW----SLKMKTLFKSQELWDIVETGIPEGNANQMREHRKRDSKALFTIQQALDD 74
Query: 71 RTQSVITHCQTVKELWEFLQFIFGKADNLNRIYALLQ*IFRPKQDKRKLMDYFLEFKKYA 130
I+ +T K+ WE L+ + D + I LQ + +R F+ +
Sbjct: 75 EIFPRISAVETSKQAWEILKQEYFGDDKV--ITVKLQTL------RRDFETLFMNENESV 126
Query: 131 EELTSLLSCKTKEDMLAQQK---KLIALSWLSGLDQEFEVVRSQILSSKQVDT------- 180
+ S S +K +++ L L +FE V + I SK + T
Sbjct: 127 QGYLSRTSAIVNRMRSYGEKIDNQIVVSKVLRSLTTKFEHVVTAIEESKDLSTYSFDELM 186
Query: 181 ---------LTDVFSRVMQSSFEKPKPAPDVDTSDRSALAAHSGFRGG-RGGGRGGRGGA 230
L +V + +F+ ++ SA H RG RG GRGG G
Sbjct: 187 SSLLAHEDRLNRSREKVQEKAFQVKGEFSYKGKAENSAGRGHG--RGNFRGRGRGGSGRG 244
Query: 231 RGRGGRFGQ----IQCYSCGELGHYKN*CPNSQQHQQHFQQSAPNRFANNVSQSDVIQTQ 286
R + G F Q IQC C + GH + C Q+ +Q F NV + +
Sbjct: 245 RNQVGEFRQYKSNIQCRYCKKFGHKEVDCWTKQKDEQK-----DANFTQNVEEESKL--- 296
Query: 287 PEKRTVVMSDDEFARYTQFQISQQSASPSSSTATFVQTGNPTVCLSSTSRRWIIDSGATN 346
F S Q +++ W IDSG +N
Sbjct: 297 ------------------FMASSQITESANAV-------------------WFIDSGCSN 319
Query: 347 HMTGDSGIFLSFSSSSIHSSVTLADGSIVRVKGSGCTTPVSTLP-----MSSVLYLPQFP 401
HM+ +F S S V L D V ++G G T + T+ + V Y+P
Sbjct: 320 HMSSSKSLFRDLDESQ-KSEVRLGDDKQVHIEGKG-TVEIKTVQGNVKFLYDVQYVPTLA 377
Query: 402 CNLLSISKITRSLKCSVTFFPDSCVFQDLSTQRIIGR-GRESDGLYLLD-EGVSKASTAY 459
NLLS+ ++ S SV F+ ++C +D + R I R + ++ LD V ++
Sbjct: 378 HNLLSVGQLMTS-GYSVVFYDNACDIKDKESGRTIARVPMTQNKMFPLDISNVGNSALVV 436
Query: 460 RTSSVSPFQLHCRLGHPSLGVLRKLC--------PQLESLSNFSCESCQFAKHHRSVYLP 511
+ + + H R GH ++ L+ L P ++ L CE C + K R +
Sbjct: 437 KEKNETNLW-HLRYGHLNVNWLKLLVQKDMVIGLPNIKELD--LCEGCIYGKQTRKSFPV 493
Query: 512 RLNKRAMSLFHIVHSDVWGPCPVTSKLGYKYFVTFVDDYSRATWLYLMKSRSELFTIFCN 571
+ RA + +VH+D+ GP + S G +YF+ F DDYSR +W+Y +K +SE F F
Sbjct: 494 GKSWRATTCLELVHADLCGPMKMESLGGSRYFLMFTDDYSRFSWVYFLKFKSETFETFKK 553
Query: 572 FCAEIRTQFNCPIHILRSDNAKEYFSAPFRTFMDKHGMIHQSSCIVTPQQNGVAERKNRH 631
F A + Q I LR+D E+ S F F +++G+ + + TP+QNGVAERKNR
Sbjct: 554 FKAFVENQSGNKIKSLRTDRGGEFLSNDFNLFCEENGIRRELTAPYTPEQNGVAERKNRT 613
Query: 632 LMEVAQALMFQMKVPKCFWADAVLTAAYLINRMPSTVLNGVIP---YSVLFPSCSLFPLP 688
++E+A++ + +P FW +AV T Y +N P+ + P ++ P S
Sbjct: 614 VVEMARSSLKAKGLPDYFWGEAVATVVYFLNISPTKDVWNTTPLEAWNGKKPRVSHL--- 670
Query: 689 PKVFGCTCFVLDVRPQVTKLDPKSLKCVFLGYSRTQKGYRCFSPALGRYLVSADVTFFED 748
++FGC + L +KLD KS KC+F+GYS K YR ++P G+ ++S +V F ED
Sbjct: 671 -RIFGCIAYALVNFH--SKLDEKSTKCIFVGYSLQSKAYRLYNPISGKVIISRNVVFNED 727
Query: 749 CSF---SGWLPSSFPVCESEDTFLTYITTSPAPQTTTGTGFQFYEKTYSRRPKSSAPPPD 805
S+ SG + S+ + +++ SP +S+P
Sbjct: 728 VSWNFNSGNMMSNIQLLPTDEESAVDFGNSP----------------------NSSPVSS 765
Query: 806 TQSLPSIPLVSSDPHDNLDLPIALRKGKRTCSYPISSYVTSNKLSPASKSFVAALDSVSV 865
+ S P P + P ++ PI LR+ R P Y SN ++ + + + VS
Sbjct: 766 SVSSPIAPSTTVAPDESSVEPIPLRRSTRE-KKPNPKY--SNTVNTSCQFALL----VSD 818
Query: 866 PKSLSDALSHAGWRQAMEEEMLALEHNATWDLVPLPAGKQVVGCKWVYTTKVNPDGSLAR 925
P +A+ + W+ AM EE+ A+E N+TW+LV P GK V+G KWV+ TK N DGS+ +
Sbjct: 819 PICYEEAVEQSEWKNAMIEEIQAIERNSTWELVDAPEGKNVIGLKWVFRTKYNADGSIQK 878
Query: 926 LKARLVAKGYAQTYGVDYTDTFSPVAKLSSVRILISLAATNHWPLFQLDVKNAFLHGDLQ 985
KARLVAKGY+Q GVD+ +TFSPVA+ +VR++++LAA H P++Q DVK+AFL+GDL+
Sbjct: 879 HKARLVAKGYSQQQGVDFDETFSPVARFETVRVVLALAAQLHLPVYQFDVKSAFLNGDLE 938
Query: 986 DEVYMEQPPGFVAQGECGKVCRLKKSLYGLKQSPRSWFGRFSDVVMEFGLRRSESDHTVF 1045
+EVY+ QP GF+ G KV +L+K+LYGLKQ+PR+W+ + G RRS+++ T++
Sbjct: 939 EEVYVSQPQGFMITGNENKVYKLRKALYGLKQAPRAWYSKIDSFFQGSGFRRSDNEPTLY 998
Query: 1046 FKQTNKGCILLV-VYVDDIVITGSDSEGIGNLKTFLQMKFQTKDLGILKYFLGIEVVYSK 1104
K+ LLV +YVDD++ GS + + K+ + F+ DLG+LKYFLG+EV+ K
Sbjct: 999 LKKQGTDEFLLVCLYVDDMIYIGSSKSLVNDFKSNMMRNFEMSDLGLLKYFLGLEVIQDK 1058
Query: 1105 NGIMISQRKYVLDMLAETGLMGSKPCETPMEPGMKL-TAEGVPFSDPQQYRRLVGKLNYL 1163
+GI ISQ+KY D+L + +M + TPM KL A+G ++P+ +R LVG LNYL
Sbjct: 1059 DGIFISQKKYAEDLLKKFQMMNCEVATTPMNINEKLQRADGTEKANPKLFRSLVGGLNYL 1118
Query: 1164 TVTRPDIAFPVSVVSQFMSSPTDAHWEALIRIVKYLKKAPGRGIVYRDHGHMRVEAFSDA 1223
T TRPDIAF VSVVS+F+ SPT H+ A R+++Y+ GI Y + R+ F+D+
Sbjct: 1119 THTRPDIAFSVSVVSRFLQSPTKQHFGAAKRVLRYVAGTTDFGIWYSKAPNFRLVGFTDS 1178
Query: 1224 DWAGSPMDRKSTTGYCVFLGGNLISWKSKKQNVVARSSAEAEYRA--MAQTTCMWVGQIL 1281
D+AG DRKST+G C G +++W SKKQ VA S++EAEY A +A +W+ ++L
Sbjct: 1179 DYAGCLDDRKSTSGSCFSFGSGVVTWSSKKQETVALSTSEAEYTAASLAARQALWLRKLL 1238
Query: 1282 SEMGIERISPMKLWCDNQAALHISSNPVFHERTKHIEVDCHFIREKLQQNLISTSYVRTG 1341
+ E+ +++ D+++A+ ++ NP FH RTKHI+V HFIR + I + T
Sbjct: 1239 EDFSYEQKESTEIFSDSKSAIAMAKNPSFHGRTKHIDVQYHFIRTLVADGRIVLKFCSTN 1298
Query: 1342 DQLADVFTKALNGVRNDFICNKLGM 1366
+Q AD+FTK+L ++++ +LG+
Sbjct: 1299 EQAADIFTKSLPQAKHEYFRLQLGV 1323
>UniRef100_Q8L4X0 Putative pol polyprotein [Oryza sativa]
Length = 1426
Score = 650 bits (1676), Expect = 0.0
Identities = 389/1186 (32%), Positives = 611/1186 (50%), Gaps = 74/1186 (6%)
Query: 217 RGGRGGGRGGRGGARGRGGR--FGQIQCYSCGELGHYKN*CPNSQQHQQHFQQSAPNRFA 274
RG GG G+ A G +++C++C E GHY C ++ ++
Sbjct: 273 RGKPGGSPKGKEAATGANSSRDISRVKCFNCDEFGHYARQCRKPRRQRR----------- 321
Query: 275 NNVSQSDVIQTQPEKRTVVMSDDEFARYTQFQISQQSASPSSSTATFVQTGNPTVCLS-- 332
+++++Q E+ T++M A ++ ++ + V V L
Sbjct: 322 ---GEANLVQAAEEEPTLLM-----AHVVGVSLAGEATLGRTPGGQEVHLTEKKVILDHE 373
Query: 333 -----STSRRWIIDSGATNHMTGDSGIFLSFSSSSIHSSVTLADGSIVRVKGSGCTT--- 384
+R W +D+GATNHMTG F + + +V DGS++ ++G G
Sbjct: 374 DGGEEEVTRDWFLDTGATNHMTGVRSAFAELDTGVV-GTVKFGDGSVIEIQGRGTVVFRC 432
Query: 385 -PVSTLPMSSVLYLPQFPCNLLSISKITRSLKCSVTFFPDSCVFQDLSTQRIIGRGRESD 443
+ +V Y+P+ N++S+ ++ + + C +D + R+ +
Sbjct: 433 KNSDHRSLDTVYYIPKLRKNIISVGRLD-ARGYDAHIWGGVCTLRDPDGLLLAKVKRDIN 491
Query: 444 GLYLLDEGVSKASTAYRTSSVSPFQLHCRLGHPSLGVLRKLC--------PQLESLSNFS 495
LY+L ++ + ++ H R GH + LR+L P ++
Sbjct: 492 YLYILKLHIANPVCMAASGGDMAWRWHARFGHLNFQSLRRLAQGNMVRGLPIIDHTDQL- 550
Query: 496 CESCQFAKHHRSVYLPRLNKRAMSLFHIVHSDVWGPCPVTSKLGYKYFVTFVDDYSRATW 555
C+ C K R + RA +VH D+ GP + G KYF+ VDD SR W
Sbjct: 551 CDGCLAGKQRRLPFPEEAKFRAQEALELVHGDLCGPITPATPGGRKYFLLLVDDMSRHMW 610
Query: 556 LYLMKSRSELFTIFCNFCAEIRTQFNCPIHILRSDNAKEYFSAPFRTFMDKHGMIHQSSC 615
+ L+ + E T F + + + LR+D E+ S F + HGM + +
Sbjct: 611 IRLLSGKHEAATAIKQFQVGVELESGRKLRALRTDRGGEFTSVEFMDYCADHGMRRELTA 670
Query: 616 IVTPQQNGVAERKNRHLMEVAQALMFQMKVPKCFWADAVLTAAYLINRMPSTVLNGVIPY 675
+PQQNGV ER+N+ ++ A++++ +P CFW +AV+ A Y++NR P+ LNGV P+
Sbjct: 671 PYSPQQNGVVERRNQTVVAAARSMLKAAGMPACFWGEAVVAAVYVLNRSPTKALNGVTPH 730
Query: 676 SVLF---PSCSLFPLPPKVFGCTCFVLDVRPQVTKLDPKSLKCVFLGYSRTQKGYRCFSP 732
PS +VFGC +V V+P + KLD + + VF+GY + K YR + P
Sbjct: 731 EAWHGRRPSVEHL----RVFGCVGYVKTVKPNLRKLDDRGTRMVFIGYEQGSKAYRMYDP 786
Query: 733 ALGRYLVSADVTFFEDCSFSGWLPSSFPVCESEDTFLTYITTSPAPQTTTGTGFQFYEKT 792
R VS DV F E +++ W E E+ F +P G Q
Sbjct: 787 VARRVCVSRDVVFDEAATWA-WRDPETEATEEEE-FTVDFFVNPVDSVVADLGEQASTPV 844
Query: 793 YSRR-PKSSAPPPDTQSLPSIPLVSSDPHD----NLDLPIALRKGKRTCSY--PISSYVT 845
P S+A PP +P+ S P+ + PI R+ + S P+ +
Sbjct: 845 QGGTYPASTATPPSPPEVPAGVEFCSPPNSVTPGTNEGPIRYRRVQDILSATEPVLDFDY 904
Query: 846 SNKLSPASKSFVAALDSVSVPKSLSDALSHAGWRQAMEEEMLALEHNATWDLVPLPAGKQ 905
S++ AS+ P SL++A WRQAM+EE+ ++E N TW LP G +
Sbjct: 905 SDQCLLASEE----------PMSLAEAEQQLCWRQAMQEELKSIEDNQTWSFAELPVGHK 954
Query: 906 VVGCKWVYTTKVNPDGSLARLKARLVAKGYAQTYGVDYTDTFSPVAKLSSVRILISLAAT 965
+G KWVY K +P G + + KARLVAKGY Q G+D+ + F+PVA++ +VR+LI++AA
Sbjct: 955 AIGLKWVYKVKKDPSGVVVKHKARLVAKGYVQQQGIDFEEVFAPVARMETVRLLIAVAAN 1014
Query: 966 NHWPLFQLDVKNAFLHGDLQDEVYMEQPPGFVAQGECGKVCRLKKSLYGLKQSPRSWFGR 1025
W + +DVK+AFL+GDL++EVY+ QPPGF+ +G+ G+V RLKK+LYGLKQ+PR+W +
Sbjct: 1015 KGWEIHHMDVKSAFLNGDLEEEVYVVQPPGFIEKGKEGQVLRLKKALYGLKQAPRAWNAK 1074
Query: 1026 FSDVVMEFGLRRSESDHTVFFKQTNKGCILLVVYVDDIVITGSDSEGIGNLKTFLQMKFQ 1085
+ ++ +SE++ V+ + T +++ VYVDD++I+G+ + I K ++ KF+
Sbjct: 1075 LHNTLISLNFIKSETESAVYVRGTGSSRLIVGVYVDDLIISGAQASEIDFFKEEMKKKFR 1134
Query: 1086 TKDLGILKYFLGIEVVYSKNGIMISQRKYVLDMLAETGLMGSKPCETPMEPGMKLTAE-G 1144
DLG+L Y+LG+EVV +G+ +SQ Y +L +TG+ G + PME +KL E G
Sbjct: 1135 MSDLGLLSYYLGMEVVQKDDGVFLSQTAYAAKILEKTGMEGCNSTQVPMEARLKLKRESG 1194
Query: 1145 VPFSDPQQYRRLVGKLNYLTVTRPDIAFPVSVVSQFMSSPTDAHWEALIRIVKYLKKAPG 1204
D YR VG L YL TRPD+A+ V VS+FM PT HW A+ I++Y+
Sbjct: 1195 GEGVDSTMYRSTVGSLRYLVNTRPDLAYSVGYVSRFMEKPTSEHWAAVKHILRYIAGTLD 1254
Query: 1205 RGIVY--RDHGHMRVEAFSDADWAGSPMDRKSTTGYCVFLGGNLISWKSKKQNVVARSSA 1262
G + R+ G +R+ FSD+D AG DRKSTTG LG +LISW+S+KQ VVA SS
Sbjct: 1255 VGCWFGRREKGELRLIGFSDSDMAGDLDDRKSTTGVLYMLGDSLISWQSQKQKVVALSSC 1314
Query: 1263 EAEYRAMAQTTC--MWVGQILSEMGIERISPMKLWCDNQAALHISSNPVFHERTKHIEVD 1320
EAEY A C +W+ ++L+E+ E + DN++A+++ NPV H+R+KHI+
Sbjct: 1315 EAEYIAATTGACQGIWLNRLLAELLGEDPGQTVMKVDNKSAINLCKNPVLHDRSKHIDTR 1374
Query: 1321 CHFIREKLQQNLISTSYVRTGDQLADVFTKALNGVRNDFICNKLGM 1366
HFIRE +++ I+ YVRT DQLAD+ TK + VR + K+G+
Sbjct: 1375 FHFIRECVEKKQIAVEYVRTEDQLADILTKPVGRVRFLELRKKMGL 1420
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.321 0.135 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,258,047,895
Number of Sequences: 2790947
Number of extensions: 95762548
Number of successful extensions: 363820
Number of sequences better than 10.0: 2616
Number of HSP's better than 10.0 without gapping: 1753
Number of HSP's successfully gapped in prelim test: 878
Number of HSP's that attempted gapping in prelim test: 347048
Number of HSP's gapped (non-prelim): 8930
length of query: 1371
length of database: 848,049,833
effective HSP length: 140
effective length of query: 1231
effective length of database: 457,317,253
effective search space: 562957538443
effective search space used: 562957538443
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 81 (35.8 bits)
Lotus: description of TM0058b.2