BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0058a.4
(457 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q8LNH8 Putative glycine-rich protein [Oryza sativa] 73 2e-11
UniRef100_Q9M0Y7 Hypothetical protein AT4g04920 [Arabidopsis tha... 64 9e-09
UniRef100_Q7XPW2 OSJNBa0032F06.19 protein [Oryza sativa] 39 0.24
UniRef100_Q8YXT3 Chromosome segregation protein [Anabaena sp.] 35 3.4
UniRef100_Q7XW39 OSJNBb0062H02.17 protein [Oryza sativa] 35 4.5
UniRef100_O49402 Heat shock transcription factor-like protein [A... 35 4.5
UniRef100_UPI0000341EA9 UPI0000341EA9 UniRef100 entry 35 5.8
UniRef100_P02672 Fibrinogen alpha chain [Contains: Fibrinopeptid... 35 5.8
UniRef100_UPI000024A713 UPI000024A713 UniRef100 entry 34 9.9
UniRef100_Q83900 PIIIa [Ovine adenovirus type 7] 34 9.9
UniRef100_Q8H7X5 Putative retroelement [Oryza sativa] 34 9.9
>UniRef100_Q8LNH8 Putative glycine-rich protein [Oryza sativa]
Length = 1291
Score = 72.8 bits (177), Expect = 2e-11
Identities = 38/70 (54%), Positives = 50/70 (71%), Gaps = 3/70 (4%)
Query: 57 LSSQTGLEGQLLCGSKGDEEPPLGR--SRTGAKNAGQGYTFEEVKIFFLALLDLCRQISR 114
L T GQ++ G+KG EE P+G +R G+ NAGQGYT +EVK+ FL L+DLC++ +
Sbjct: 1015 LEDGTTSRGQMV-GAKGAEENPVGNKSARIGSGNAGQGYTSDEVKVLFLILVDLCKRTAT 1073
Query: 115 LQHPLPVSQV 124
LQHPLP SQV
Sbjct: 1074 LQHPLPSSQV 1083
>UniRef100_Q9M0Y7 Hypothetical protein AT4g04920 [Arabidopsis thaliana]
Length = 1196
Score = 63.9 bits (154), Expect = 9e-09
Identities = 31/59 (52%), Positives = 41/59 (68%)
Query: 66 QLLCGSKGDEEPPLGRSRTGAKNAGQGYTFEEVKIFFLALLDLCRQISRLQHPLPVSQV 124
QL G KG +E ++ G+ NAGQGYT+EEV++ F L+DLC++ S L HPLP SQV
Sbjct: 960 QLGTGVKGIDENSARTTKMGSGNAGQGYTYEEVRVLFHILMDLCKRTSGLAHPLPGSQV 1018
>UniRef100_Q7XPW2 OSJNBa0032F06.19 protein [Oryza sativa]
Length = 1575
Score = 39.3 bits (90), Expect = 0.24
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Query: 209 LASWLEEEQVLELL--SNLLKAQDLLSAQAKRLQSQLDLLAGHWENPQSQLPKSRPLIEV 266
LASWL E + L +LL+AQ + +QA +S+ G W + Q + ++
Sbjct: 1349 LASWLSERNDMNTLIHHHLLRAQQRMKSQADSKRSERCFAVGDWVFMKLQPYIQQSVMTR 1408
Query: 267 PKQKSNFDSHGLLKVVMTIGMEEYELKKKALSV 299
+K +F +G +V+ IG+ Y L+ A S+
Sbjct: 1409 SNRKLSFKYYGPFQVLQRIGLVAYRLQLPAHSL 1441
>UniRef100_Q8YXT3 Chromosome segregation protein [Anabaena sp.]
Length = 1208
Score = 35.4 bits (80), Expect = 3.4
Identities = 35/112 (31%), Positives = 55/112 (48%), Gaps = 7/112 (6%)
Query: 215 EEQVLELLSNLLKAQDLLSAQAKRLQSQLDLLAGHWENPQSQLPKSRPLIEVPKQ-KSNF 273
E ++ +L LK ++ L+A LQSQL L NP ++P L E+ K+ +S
Sbjct: 946 EWEIQKLEETQLKRREDLTA----LQSQLQELVPELPNPLPEVPDKVDLEELQKELRSLA 1001
Query: 274 DSHGLLKVVMTIGMEEYELKKKALSVPQQNQPLFILFLEGNELLVQIPQVMT 325
++ V + +EEYE +K L + +Q L L E ELL++I T
Sbjct: 1002 KRLQAMEPVNMLALEEYERTQKRLE--ELSQKLQTLEGERTELLLRIENFTT 1051
>UniRef100_Q7XW39 OSJNBb0062H02.17 protein [Oryza sativa]
Length = 1629
Score = 35.0 bits (79), Expect = 4.5
Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Query: 209 LASWLEEEQVLELL--SNLLKAQDLLSAQAKRLQSQLDLLAGHWENPQSQLPKSRPLIEV 266
L WL E + ++ L +LL+AQ + QA + +S+ G W + Q + ++
Sbjct: 1404 LVEWLHEREKMQALIRDHLLRAQTRMKQQADQHRSERSFAVGDWVYLKLQPFVQQSVVTR 1463
Query: 267 PKQKSNFDSHGLLKVVMTIGMEEYEL 292
+K +F +G +V+ +G Y L
Sbjct: 1464 ANRKLSFRFYGPFQVLDKVGTVAYRL 1489
>UniRef100_O49402 Heat shock transcription factor-like protein [Arabidopsis thaliana]
Length = 291
Score = 35.0 bits (79), Expect = 4.5
Identities = 35/130 (26%), Positives = 60/130 (45%), Gaps = 12/130 (9%)
Query: 143 WEFKDFVNKRQEQFLWHRPAGNTLISCHFWPHGSRGLIFHGDSITGQVKDLWDHYMFGNR 202
W ++F N ++F + R NT S F HG R + DS G+ + D+++ G R
Sbjct: 43 WNPEEFYNNLLQRFCFQRI--NTFFSFLF-SHGFRKI----DS--GKWEFANDNFVRGQR 93
Query: 203 EYYCMLLASWLEEEQVLELLSNLLKAQDLLSAQAKRLQSQLDLLAGHWENPQSQLPKSRP 262
+++ +E+E + L KA+ L + K++Q Q L H P S+LP
Sbjct: 94 HLINNIISDVIEQEVQYDQGMELFKAEKLFARLVKKVQDQ---LPPHNSYPTSKLPFPTK 150
Query: 263 LIEVPKQKSN 272
+ E+ S+
Sbjct: 151 IYEMVDDPSS 160
>UniRef100_UPI0000341EA9 UPI0000341EA9 UniRef100 entry
Length = 497
Score = 34.7 bits (78), Expect = 5.8
Identities = 28/117 (23%), Positives = 50/117 (41%), Gaps = 14/117 (11%)
Query: 253 PQSQLPKSRPLIEVPKQKSNFDSHGLLKVVMTIGMEEYELKKKALSVPQQNQPLFILFLE 312
P S LP +P+I+ KQ + +++ +++I E+E +K + F+ +
Sbjct: 213 PSSHLPSEKPIIDDRKQIAGINTN-----LISIHDLEFEAEKDLYTYS------FMETAD 261
Query: 313 GNELLVQIPQVMTAIKVLLLLEMGCQTDTW---NPGGCSDLTATTWPTSFQQWDPGG 366
G+E+ P + L + TDTW + D+ P SF +D GG
Sbjct: 262 GDEIFPYTPMFFDIWALRYLYSVNQNTDTWFRPDTNSGDDIYFIEGPVSFTIFDAGG 318
>UniRef100_P02672 Fibrinogen alpha chain [Contains: Fibrinopeptide A] [Bos taurus]
Length = 596
Score = 34.7 bits (78), Expect = 5.8
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 10/49 (20%)
Query: 341 TWNPGGCSDLTATTW------PTSFQQWDPGGGFYCPYPDNAGKWIKGR 383
TWNPG +A TW P S W+PG P P +AG W GR
Sbjct: 293 TWNPGRPEPGSAGTWNPGRPEPGSAGTWNPGR----PEPGSAGTWNPGR 337
Score = 34.7 bits (78), Expect = 5.8
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 10/49 (20%)
Query: 341 TWNPGGCSDLTATTW------PTSFQQWDPGGGFYCPYPDNAGKWIKGR 383
TWNPG +A TW P S W+PG P P +AG W GR
Sbjct: 306 TWNPGRPEPGSAGTWNPGRPEPGSAGTWNPGR----PEPGSAGTWNPGR 350
>UniRef100_UPI000024A713 UPI000024A713 UniRef100 entry
Length = 3209
Score = 33.9 bits (76), Expect = 9.9
Identities = 21/96 (21%), Positives = 48/96 (49%), Gaps = 3/96 (3%)
Query: 214 EEEQVLELLSNLLKAQDLLSAQAKRLQSQLDLLAGHWENPQSQLPKSRPLIE---VPKQK 270
E E++ ++ L AQ +AK+ + Q D + + + + ++E V + +
Sbjct: 1055 EAEKLKVKVTQLSDAQSKAEEEAKKFKKQADEIKIRLQETEKHTSEKHTVVEKLEVQRLQ 1114
Query: 271 SNFDSHGLLKVVMTIGMEEYELKKKALSVPQQNQPL 306
S ++ GL K + + E+ +LKK+A + +Q++ +
Sbjct: 1115 SKQEADGLHKAIADLEKEKEKLKKEAADLQKQSKEM 1150
>UniRef100_Q83900 PIIIa [Ovine adenovirus type 7]
Length = 568
Score = 33.9 bits (76), Expect = 9.9
Identities = 22/82 (26%), Positives = 36/82 (43%)
Query: 239 LQSQLDLLAGHWENPQSQLPKSRPLIEVPKQKSNFDSHGLLKVVMTIGMEEYELKKKALS 298
+QS L L G ++ QS + +S + + Q L +T G YE K+ L
Sbjct: 92 VQSNLQTLTGDIKSLQSDIIRSSDIPNLSNQVVLNTFLNSLPSTVTFGQHNYEAFKQTLR 151
Query: 299 VPQQNQPLFILFLEGNELLVQI 320
+ P +F GN+ L+Q+
Sbjct: 152 LFVNETPNITVFRSGNDTLIQV 173
>UniRef100_Q8H7X5 Putative retroelement [Oryza sativa]
Length = 415
Score = 33.9 bits (76), Expect = 9.9
Identities = 22/93 (23%), Positives = 45/93 (47%), Gaps = 2/93 (2%)
Query: 209 LASWLEEEQVLELL--SNLLKAQDLLSAQAKRLQSQLDLLAGHWENPQSQLPKSRPLIEV 266
L+ WL+E + ++ L +LL+AQ + QA + + + G W + Q + ++
Sbjct: 193 LSDWLQEREQMQSLIRDHLLRAQARMKFQADKHRFERSFAVGDWVYLKLQPFVQQSVVTR 252
Query: 267 PKQKSNFDSHGLLKVVMTIGMEEYELKKKALSV 299
+K F +G +++ +G Y+L A S+
Sbjct: 253 ANRKLAFRFYGPFQILARVGEVAYKLALPATSL 285
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.320 0.138 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 802,546,444
Number of Sequences: 2790947
Number of extensions: 34699230
Number of successful extensions: 74219
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 74213
Number of HSP's gapped (non-prelim): 16
length of query: 457
length of database: 848,049,833
effective HSP length: 131
effective length of query: 326
effective length of database: 482,435,776
effective search space: 157274062976
effective search space used: 157274062976
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 76 (33.9 bits)
Lotus: description of TM0058a.4