BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0052a.2
(68 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q9LN67 F18O14.3 [Arabidopsis thaliana] 114 6e-25
UniRef100_Q8LDY7 Putative RING zinc finger protein [Arabidopsis ... 109 2e-23
UniRef100_O64824 Putative RING zinc finger protein [Arabidopsis ... 109 2e-23
UniRef100_Q94DW0 P0403C05.28 protein [Oryza sativa] 107 1e-22
UniRef100_Q5ZAN7 Putative RING finger protein [Oryza sativa] 107 1e-22
UniRef100_Q84SW9 Hypothetical protein OSJNBa0092M19.20 [Oryza sa... 104 5e-22
UniRef100_Q9S7D6 Putative RING zinc finger protein; 43117-43530 ... 104 7e-22
UniRef100_Q84SC7 Zinc finger (C3HC4-type RING finger) protein-li... 87 8e-17
UniRef100_Q8H222 Putative RING protein [Populus alba x Populus t... 87 1e-16
UniRef100_Q6R567 Ring domain containing protein [Capsicum annuum] 87 1e-16
UniRef100_Q5QLT9 Putative ring finger protein 5 [Oryza sativa] 87 1e-16
UniRef100_Q8GUK7 Putative RING zinc finger protein [Arabidopsis ... 84 7e-16
UniRef100_Q9SZS2 Putative RING zinc finger protein [Arabidopsis ... 84 7e-16
UniRef100_UPI00004314C9 UPI00004314C9 UniRef100 entry 84 9e-16
UniRef100_UPI000021DA9C UPI000021DA9C UniRef100 entry 83 2e-15
UniRef100_UPI0000360A95 UPI0000360A95 UniRef100 entry 83 2e-15
UniRef100_Q5ZIR9 Hypothetical protein [Gallus gallus] 83 2e-15
UniRef100_Q91YT2 1700022N24Rik protein [Mus musculus] 83 2e-15
UniRef100_Q6ZWS3 Mus musculus adult male diencephalon cDNA, RIKE... 83 2e-15
UniRef100_Q5RFK9 Hypothetical protein DKFZp469F0122 [Pongo pygma... 83 2e-15
>UniRef100_Q9LN67 F18O14.3 [Arabidopsis thaliana]
Length = 226
Score = 114 bits (285), Expect = 6e-25
Identities = 47/68 (69%), Positives = 56/68 (82%)
Query: 1 CNICFDLAQDPVITLCGYLFRWPCLYKWLHFHSLSQQCPVCNALAEEDKLVPLHGRGNTS 60
CNIC DLAQDP++TLCG+LF WPCLYKWLH HS S+ CPVC A+ EED+LVPL+GRG +S
Sbjct: 23 CNICLDLAQDPIVTLCGHLFCWPCLYKWLHLHSQSKDCPVCKAVIEEDRLVPLYGRGKSS 82
Query: 61 SSSSSSSI 68
+ S SI
Sbjct: 83 ADPRSKSI 90
>UniRef100_Q8LDY7 Putative RING zinc finger protein [Arabidopsis thaliana]
Length = 227
Score = 109 bits (273), Expect = 2e-23
Identities = 43/65 (66%), Positives = 54/65 (82%)
Query: 1 CNICFDLAQDPVITLCGYLFRWPCLYKWLHFHSLSQQCPVCNALAEEDKLVPLHGRGNTS 60
CNICF+LAQDP++TLCG+LF WPCLY+WLH HS SQ+CPVC A+ ++DKLVPL+GRG
Sbjct: 28 CNICFELAQDPIVTLCGHLFCWPCLYRWLHHHSHSQECPVCKAVVQDDKLVPLYGRGKNQ 87
Query: 61 SSSSS 65
+ S
Sbjct: 88 TDPRS 92
>UniRef100_O64824 Putative RING zinc finger protein [Arabidopsis thaliana]
Length = 227
Score = 109 bits (273), Expect = 2e-23
Identities = 43/65 (66%), Positives = 54/65 (82%)
Query: 1 CNICFDLAQDPVITLCGYLFRWPCLYKWLHFHSLSQQCPVCNALAEEDKLVPLHGRGNTS 60
CNICF+LAQDP++TLCG+LF WPCLY+WLH HS SQ+CPVC A+ ++DKLVPL+GRG
Sbjct: 28 CNICFELAQDPIVTLCGHLFCWPCLYRWLHHHSHSQECPVCKAVVQDDKLVPLYGRGKNQ 87
Query: 61 SSSSS 65
+ S
Sbjct: 88 TDPRS 92
>UniRef100_Q94DW0 P0403C05.28 protein [Oryza sativa]
Length = 560
Score = 107 bits (266), Expect = 1e-22
Identities = 44/68 (64%), Positives = 55/68 (80%)
Query: 1 CNICFDLAQDPVITLCGYLFRWPCLYKWLHFHSLSQQCPVCNALAEEDKLVPLHGRGNTS 60
CNIC +LAQDPV+TLCG+LF WPCLY+WLH H+ S++CPVC A EE+KLVPL+GRG S
Sbjct: 363 CNICLELAQDPVVTLCGHLFCWPCLYEWLHVHAHSRECPVCKAGLEEEKLVPLYGRGKAS 422
Query: 61 SSSSSSSI 68
+ S S+
Sbjct: 423 TDPRSRSV 430
>UniRef100_Q5ZAN7 Putative RING finger protein [Oryza sativa]
Length = 224
Score = 107 bits (266), Expect = 1e-22
Identities = 44/68 (64%), Positives = 55/68 (80%)
Query: 1 CNICFDLAQDPVITLCGYLFRWPCLYKWLHFHSLSQQCPVCNALAEEDKLVPLHGRGNTS 60
CNIC +LAQDPV+TLCG+LF WPCLY+WLH H+ S++CPVC A EE+KLVPL+GRG S
Sbjct: 27 CNICLELAQDPVVTLCGHLFCWPCLYEWLHVHAHSRECPVCKAGLEEEKLVPLYGRGKAS 86
Query: 61 SSSSSSSI 68
+ S S+
Sbjct: 87 TDPRSRSV 94
>UniRef100_Q84SW9 Hypothetical protein OSJNBa0092M19.20 [Oryza sativa]
Length = 233
Score = 104 bits (260), Expect = 5e-22
Identities = 41/68 (60%), Positives = 53/68 (77%)
Query: 1 CNICFDLAQDPVITLCGYLFRWPCLYKWLHFHSLSQQCPVCNALAEEDKLVPLHGRGNTS 60
CNICF+L Q+P++TLCG+LF WPC+Y+WLH H+ S +CPVC A+ EEDKLVPL+GRG
Sbjct: 24 CNICFELPQEPIVTLCGHLFCWPCIYRWLHIHAHSPECPVCKAVVEEDKLVPLYGRGKDR 83
Query: 61 SSSSSSSI 68
S +I
Sbjct: 84 VDPRSKNI 91
>UniRef100_Q9S7D6 Putative RING zinc finger protein; 43117-43530 [Arabidopsis
thaliana]
Length = 137
Score = 104 bits (259), Expect = 7e-22
Identities = 42/65 (64%), Positives = 51/65 (77%)
Query: 1 CNICFDLAQDPVITLCGYLFRWPCLYKWLHFHSLSQQCPVCNALAEEDKLVPLHGRGNTS 60
CNIC +LA++P++TLCG+LF WPCLYKWLH+HS S CPVC AL +ED LVPL+G G S
Sbjct: 19 CNICLELAREPIVTLCGHLFCWPCLYKWLHYHSKSNHCPVCKALVKEDTLVPLYGMGKPS 78
Query: 61 SSSSS 65
S S
Sbjct: 79 SDPRS 83
>UniRef100_Q84SC7 Zinc finger (C3HC4-type RING finger) protein-like [Oryza sativa]
Length = 455
Score = 87.4 bits (215), Expect = 8e-17
Identities = 35/68 (51%), Positives = 46/68 (67%)
Query: 1 CNICFDLAQDPVITLCGYLFRWPCLYKWLHFHSLSQQCPVCNALAEEDKLVPLHGRGNTS 60
CNICF+ A+DPV+T CG+LF WPC+Y+WLH HS CPVC E + P++GRG
Sbjct: 241 CNICFESAKDPVVTPCGHLFCWPCIYQWLHGHSEHSDCPVCKGEVLEVNVTPIYGRGGGE 300
Query: 61 SSSSSSSI 68
+SS + I
Sbjct: 301 ENSSRNDI 308
>UniRef100_Q8H222 Putative RING protein [Populus alba x Populus tremula]
Length = 233
Score = 87.0 bits (214), Expect = 1e-16
Identities = 37/73 (50%), Positives = 47/73 (63%), Gaps = 6/73 (8%)
Query: 1 CNICFDLAQDPVITLCGYLFRWPCLYKWLHFHSLS------QQCPVCNALAEEDKLVPLH 54
CNICFD A +PV+TLCG+L+ WPC+YKWLH S S QCPVC A +VPL+
Sbjct: 30 CNICFDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLASDEHPQCPVCKADISHTTMVPLY 89
Query: 55 GRGNTSSSSSSSS 67
GRG S+ + +
Sbjct: 90 GRGQGSTEAEGKT 102
>UniRef100_Q6R567 Ring domain containing protein [Capsicum annuum]
Length = 252
Score = 87.0 bits (214), Expect = 1e-16
Identities = 37/72 (51%), Positives = 47/72 (64%), Gaps = 8/72 (11%)
Query: 1 CNICFDLAQDPVITLCGYLFRWPCLYKWLHFHSLSQ--------QCPVCNALAEEDKLVP 52
CNIC D +PVITLCG+L+ WPC+YKW++F S+S QCPVC A E L+P
Sbjct: 41 CNICLDCVHEPVITLCGHLYCWPCIYKWIYFQSVSSENSDQQQPQCPVCKAEVSEKTLIP 100
Query: 53 LHGRGNTSSSSS 64
L+GRG S+ S
Sbjct: 101 LYGRGGQSTKPS 112
>UniRef100_Q5QLT9 Putative ring finger protein 5 [Oryza sativa]
Length = 561
Score = 86.7 bits (213), Expect = 1e-16
Identities = 32/59 (54%), Positives = 45/59 (76%)
Query: 1 CNICFDLAQDPVITLCGYLFRWPCLYKWLHFHSLSQQCPVCNALAEEDKLVPLHGRGNT 59
CNICFD+A +PV+T CG+LF WPCLY+WL+ +S ++CPVC E + P++GRGN+
Sbjct: 235 CNICFDMASEPVVTSCGHLFCWPCLYQWLNVYSNHKECPVCKGEVTEANITPIYGRGNS 293
>UniRef100_Q8GUK7 Putative RING zinc finger protein [Arabidopsis thaliana]
Length = 243
Score = 84.3 bits (207), Expect = 7e-16
Identities = 39/74 (52%), Positives = 46/74 (61%), Gaps = 7/74 (9%)
Query: 1 CNICFDLAQDPVITLCGYLFRWPCLYKWLHFHSLS-------QQCPVCNALAEEDKLVPL 53
CNIC D A DPV+TLCG+LF WPC+YKWLH S CPVC + LVPL
Sbjct: 44 CNICLDTAHDPVVTLCGHLFCWPCIYKWLHVQLSSVSVDQHQNNCPVCKSNITITSLVPL 103
Query: 54 HGRGNTSSSSSSSS 67
+GRG +S SS+ S
Sbjct: 104 YGRGMSSPSSTFGS 117
>UniRef100_Q9SZS2 Putative RING zinc finger protein [Arabidopsis thaliana]
Length = 264
Score = 84.3 bits (207), Expect = 7e-16
Identities = 39/74 (52%), Positives = 46/74 (61%), Gaps = 7/74 (9%)
Query: 1 CNICFDLAQDPVITLCGYLFRWPCLYKWLHFHSLS-------QQCPVCNALAEEDKLVPL 53
CNIC D A DPV+TLCG+LF WPC+YKWLH S CPVC + LVPL
Sbjct: 56 CNICLDTAHDPVVTLCGHLFCWPCIYKWLHVQLSSVSVDQHQNNCPVCKSNITITSLVPL 115
Query: 54 HGRGNTSSSSSSSS 67
+GRG +S SS+ S
Sbjct: 116 YGRGMSSPSSTFGS 129
>UniRef100_UPI00004314C9 UPI00004314C9 UniRef100 entry
Length = 133
Score = 84.0 bits (206), Expect = 9e-16
Identities = 32/68 (47%), Positives = 47/68 (69%)
Query: 1 CNICFDLAQDPVITLCGYLFRWPCLYKWLHFHSLSQQCPVCNALAEEDKLVPLHGRGNTS 60
CNIC D A++ VI++CG+LF WPCL++WL Q CPVC A +DK++PL+GRG+T
Sbjct: 30 CNICLDTAKNAVISMCGHLFCWPCLHQWLETRPTRQMCPVCKAAISKDKVIPLYGRGDTR 89
Query: 61 SSSSSSSI 68
+++
Sbjct: 90 HEDPRNNV 97
>UniRef100_UPI000021DA9C UPI000021DA9C UniRef100 entry
Length = 224
Score = 83.2 bits (204), Expect = 2e-15
Identities = 34/59 (57%), Positives = 43/59 (72%)
Query: 1 CNICFDLAQDPVITLCGYLFRWPCLYKWLHFHSLSQQCPVCNALAEEDKLVPLHGRGNT 59
CNIC D A+D VI+LCG+LF WPCL++WL Q CPVC A DK++PL+GRG+T
Sbjct: 71 CNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLYGRGST 129
>UniRef100_UPI0000360A95 UPI0000360A95 UniRef100 entry
Length = 193
Score = 83.2 bits (204), Expect = 2e-15
Identities = 34/59 (57%), Positives = 43/59 (72%)
Query: 1 CNICFDLAQDPVITLCGYLFRWPCLYKWLHFHSLSQQCPVCNALAEEDKLVPLHGRGNT 59
CNIC D A+D VI+LCG+LF WPCL++WL Q CPVC A DK++PL+GRG+T
Sbjct: 40 CNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLYGRGST 98
>UniRef100_Q5ZIR9 Hypothetical protein [Gallus gallus]
Length = 194
Score = 83.2 bits (204), Expect = 2e-15
Identities = 34/59 (57%), Positives = 43/59 (72%)
Query: 1 CNICFDLAQDPVITLCGYLFRWPCLYKWLHFHSLSQQCPVCNALAEEDKLVPLHGRGNT 59
CNIC D A+D VI+LCG+LF WPCL++WL Q CPVC A DK++PL+GRG+T
Sbjct: 41 CNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLYGRGST 99
>UniRef100_Q91YT2 1700022N24Rik protein [Mus musculus]
Length = 192
Score = 83.2 bits (204), Expect = 2e-15
Identities = 34/59 (57%), Positives = 43/59 (72%)
Query: 1 CNICFDLAQDPVITLCGYLFRWPCLYKWLHFHSLSQQCPVCNALAEEDKLVPLHGRGNT 59
CNIC D A+D VI+LCG+LF WPCL++WL Q CPVC A DK++PL+GRG+T
Sbjct: 39 CNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLYGRGST 97
>UniRef100_Q6ZWS3 Mus musculus adult male diencephalon cDNA, RIKEN full-length
enriched library, clone:9330157C04 product:hypothetical
RING finger containing protein, full insert sequence
[Mus musculus]
Length = 228
Score = 83.2 bits (204), Expect = 2e-15
Identities = 34/59 (57%), Positives = 43/59 (72%)
Query: 1 CNICFDLAQDPVITLCGYLFRWPCLYKWLHFHSLSQQCPVCNALAEEDKLVPLHGRGNT 59
CNIC D A+D VI+LCG+LF WPCL++WL Q CPVC A DK++PL+GRG+T
Sbjct: 75 CNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLYGRGST 133
>UniRef100_Q5RFK9 Hypothetical protein DKFZp469F0122 [Pongo pygmaeus]
Length = 192
Score = 83.2 bits (204), Expect = 2e-15
Identities = 34/59 (57%), Positives = 43/59 (72%)
Query: 1 CNICFDLAQDPVITLCGYLFRWPCLYKWLHFHSLSQQCPVCNALAEEDKLVPLHGRGNT 59
CNIC D A+D VI+LCG+LF WPCL++WL Q CPVC A DK++PL+GRG+T
Sbjct: 39 CNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLYGRGST 97
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.324 0.137 0.473
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 113,785,536
Number of Sequences: 2790947
Number of extensions: 3409543
Number of successful extensions: 16584
Number of sequences better than 10.0: 1629
Number of HSP's better than 10.0 without gapping: 478
Number of HSP's successfully gapped in prelim test: 1151
Number of HSP's that attempted gapping in prelim test: 15909
Number of HSP's gapped (non-prelim): 1708
length of query: 68
length of database: 848,049,833
effective HSP length: 44
effective length of query: 24
effective length of database: 725,248,165
effective search space: 17405955960
effective search space used: 17405955960
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 68 (30.8 bits)
Lotus: description of TM0052a.2