BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0051b.7
         (189 letters)

Database: uniref100 
           2,790,947 sequences; 848,049,833 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

UniRef100_Q7XMR0 OSJNBa0094O15.8 protein [Oryza sativa]                35  1.0
UniRef100_UPI00003C1477 UPI00003C1477 UniRef100 entry                  35  1.3
UniRef100_Q6YWQ7 Hypothetical protein OSJNBa0072H09.31 [Oryza sa...    35  1.3
UniRef100_UPI0000288C52 UPI0000288C52 UniRef100 entry                  34  2.2
UniRef100_UPI00002F9FDB UPI00002F9FDB UniRef100 entry                  33  2.9
UniRef100_UPI00002215A6 UPI00002215A6 UniRef100 entry                  33  2.9
UniRef100_UPI000030F575 UPI000030F575 UniRef100 entry                  33  3.8
UniRef100_UPI00002AAEF7 UPI00002AAEF7 UniRef100 entry                  33  5.0
UniRef100_Q9W674 CCCH zinc finger protein C3H-4 [Xenopus laevis]       33  5.0
UniRef100_UPI00001D0D41 UPI00001D0D41 UniRef100 entry                  32  6.5
UniRef100_UPI00001D0D3B UPI00001D0D3B UniRef100 entry                  32  6.5
UniRef100_Q94LN5 Putative retroelement pol polyprotein [Oryza sa...    32  6.5
UniRef100_UPI000028A8B2 UPI000028A8B2 UniRef100 entry                  32  8.5
UniRef100_Q8SB48 Putative polyprotein [Oryza sativa]                   32  8.5

>UniRef100_Q7XMR0 OSJNBa0094O15.8 protein [Oryza sativa]
          Length = 716

 Score = 35.0 bits (79), Expect = 1.0
 Identities = 16/38 (42%), Positives = 23/38 (60%)

Query: 114 FGRGPVGFVQEVMVKENVHINIFDIQGAPLFYQWIVIT 151
           F  G VG+ Q  MV+E++H   F   GA   Y+W+V+T
Sbjct: 110 FMDGNVGYNQIFMVEEDIHNTAFRCPGAISLYEWVVMT 147


>UniRef100_UPI00003C1477 UPI00003C1477 UniRef100 entry
          Length = 967

 Score = 34.7 bits (78), Expect = 1.3
 Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 6/87 (6%)

Query: 26  LRQNEDEQAISDQRSMEEEGKKLRRCSGGVARVVAAQRMAAQVMRRRVV---AVVRSDWA 82
           L   +DEQA++  R+ EE  K  RR   GV   +A   +A   +R   V   A   S+W+
Sbjct: 127 LLDEDDEQALAGGRAREEWIKSARRARYGVGGSLARGSLAPSDIRNSTVGFEACTMSNWS 186

Query: 83  PNRNRPIQLIWSRFFPSLNPPSDPSEP 109
            + N       S   PS +P +  S P
Sbjct: 187 SSSNNSPSTSSS---PSTSPSASTSSP 210


>UniRef100_Q6YWQ7 Hypothetical protein OSJNBa0072H09.31 [Oryza sativa]
          Length = 158

 Score = 34.7 bits (78), Expect = 1.3
 Identities = 31/98 (31%), Positives = 41/98 (41%), Gaps = 10/98 (10%)

Query: 12  GRVTGGSGRFHRNRLRQNEDEQAISD---QRSMEEEGKKLRRCSGGVARVVAAQRMAAQV 68
           G    G G   R+R RQ   E+ + D   +R   + G      +GGVA+ V   R+    
Sbjct: 27  GGEAAGGGVVERDRHRQVGGERGVGDAVAERRGLDSGCGGGGVAGGVAKRVVQARLHVHG 86

Query: 69  MRRRVVAVVRSDWAPNRNRPIQLIWSRFFPSLNPPSDP 106
            +RR  A VR   A  R  P       + P L PPS P
Sbjct: 87  CQRRARARVRGSAAMARRCP-------WHPPLPPPSPP 117


>UniRef100_UPI0000288C52 UPI0000288C52 UniRef100 entry
          Length = 243

 Score = 33.9 bits (76), Expect = 2.2
 Identities = 19/48 (39%), Positives = 28/48 (57%)

Query: 129 ENVHINIFDIQGAPLFYQWIVITSVVLGIIDYDISLEYISFYVVIMLN 176
           EN  INIFDI  + L Y  I I  +++  I Y + L YI+  ++I+ N
Sbjct: 128 ENNEINIFDIGISFLSYLVIFIILIIISFILYRLKLPYINKAILIITN 175


>UniRef100_UPI00002F9FDB UPI00002F9FDB UniRef100 entry
          Length = 565

 Score = 33.5 bits (75), Expect = 2.9
 Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 4/90 (4%)

Query: 24  NRLRQNEDEQAISDQRSMEEEGKKLRRCSGGVARVVAAQR---MAAQVMRRRVVAVVRSD 80
           NRL++       S++R ++EE K +R     +AR+  AQ       +  RR+++A   + 
Sbjct: 414 NRLKEALKAARQSNERRLQEEQKAVRSAGVIMARLTRAQSHHCSDEERKRRKILARKVAP 473

Query: 81  WAPNRNRPIQLIWSRFFPSLNPPSDPSEPS 110
            AP+R  P     S    S +PP+ PS P+
Sbjct: 474 LAPSRKPPAPASGSGSGAS-SPPTCPSSPT 502


>UniRef100_UPI00002215A6 UPI00002215A6 UniRef100 entry
          Length = 545

 Score = 33.5 bits (75), Expect = 2.9
 Identities = 16/47 (34%), Positives = 29/47 (61%)

Query: 129 ENVHINIFDIQGAPLFYQWIVITSVVLGIIDYDISLEYISFYVVIML 175
           ++V   IF + GAP FYQWI + +     +   +S+ Y+S+Y V+++
Sbjct: 97  QHVTAIIFCVCGAPEFYQWIRMDNEGTVSLGSALSVSYLSWYAVLVV 143


>UniRef100_UPI000030F575 UPI000030F575 UniRef100 entry
          Length = 202

 Score = 33.1 bits (74), Expect = 3.8
 Identities = 20/46 (43%), Positives = 31/46 (66%), Gaps = 1/46 (2%)

Query: 23 RNRLRQNEDEQ-AISDQRSMEEEGKKLRRCSGGVARVVAAQRMAAQ 67
          +NRLR+ E EQ AI +++ MEE+ + L++ S  VAR VA + +  Q
Sbjct: 43 QNRLRELEAEQKAIEEKQKMEEQMRVLKQHSEDVARNVAKELVKGQ 88


>UniRef100_UPI00002AAEF7 UPI00002AAEF7 UniRef100 entry
          Length = 217

 Score = 32.7 bits (73), Expect = 5.0
 Identities = 25/87 (28%), Positives = 43/87 (48%), Gaps = 25/87 (28%)

Query: 121 FVQEVMVKENVHINIFDIQGAPLFYQWI--VITS-----------VVLGIIDYD---ISL 164
           FV+E ++  NVH  +F    AP FY W+  ++ +           +V+   D D    +L
Sbjct: 129 FVEERLIPTNVHFELF---FAPKFYSWVNKIVPNKFSSLEKDHPRLVIPFFDEDNRMFAL 185

Query: 165 EYISF------YVVIMLNPDIKKLIGL 185
           +  +F      Y+ I+LNP+ +K+ GL
Sbjct: 186 QGRAFGLEEPKYITIILNPEKEKIYGL 212


>UniRef100_Q9W674 CCCH zinc finger protein C3H-4 [Xenopus laevis]
          Length = 276

 Score = 32.7 bits (73), Expect = 5.0
 Identities = 13/27 (48%), Positives = 17/27 (62%)

Query: 92  IWSRFFPSLNPPSDPSEPSGPVFGRGP 118
           ++S FFP L+PP+DP  P  P F   P
Sbjct: 10  LFSSFFPQLSPPADPETPLLPSFSAPP 36


>UniRef100_UPI00001D0D41 UPI00001D0D41 UniRef100 entry
          Length = 325

 Score = 32.3 bits (72), Expect = 6.5
 Identities = 26/110 (23%), Positives = 46/110 (41%), Gaps = 6/110 (5%)

Query: 28  QNEDEQAISDQRSMEEEGKKLRRCSGGVARVVAAQRMAAQVMRRRVVAVVRSDWAPNRNR 87
           +NE+ + + DQ ++EE  K+  R  G  +  +         M++    V +S    +   
Sbjct: 175 RNENRELLWDQIALEESIKETTRFCGEASMKICITSSLRAAMKQNYPEVHQS---ASEKD 231

Query: 88  PIQLIWSRFFPSLNPPSDPSEPSGPVFGRGPVGFVQEVMVKENVHINIFD 137
            + ++W+  FP      DPS P  P+   G +G      V   V +N  D
Sbjct: 232 ELLILWNGIFPETR-DKDPSLP--PLLCFGTLGLSGVAQVLRGVPVNDID 278


>UniRef100_UPI00001D0D3B UPI00001D0D3B UniRef100 entry
          Length = 355

 Score = 32.3 bits (72), Expect = 6.5
 Identities = 26/110 (23%), Positives = 46/110 (41%), Gaps = 6/110 (5%)

Query: 28  QNEDEQAISDQRSMEEEGKKLRRCSGGVARVVAAQRMAAQVMRRRVVAVVRSDWAPNRNR 87
           +NE+ + + DQ ++EE  K+  R  G  +  +         M++    V +S    +   
Sbjct: 205 RNENRELLWDQIALEESIKETTRFCGEASMKICITSSLRAAMKQNYPEVHQS---ASEKD 261

Query: 88  PIQLIWSRFFPSLNPPSDPSEPSGPVFGRGPVGFVQEVMVKENVHINIFD 137
            + ++W+  FP      DPS P  P+   G +G      V   V +N  D
Sbjct: 262 ELLILWNGIFPETR-DKDPSLP--PLLCFGTLGLSGVAQVLRGVPVNDID 308


>UniRef100_Q94LN5 Putative retroelement pol polyprotein [Oryza sativa]
          Length = 1580

 Score = 32.3 bits (72), Expect = 6.5
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)

Query: 114 FGRGPVGFVQEVMVKENVHINIFDIQGAPLFYQWIVITSVVLGI-IDYDISLEYI 167
           F  G  G+ Q  M +E++H   F   GA   ++W+VIT V+      Y  ++ YI
Sbjct: 673 FMDGNAGYNQIFMAEEDIHKTTFRCPGAIGLFEWVVITFVLKSAGATYQRAMNYI 727


>UniRef100_UPI000028A8B2 UPI000028A8B2 UniRef100 entry
          Length = 113

 Score = 32.0 bits (71), Expect = 8.5
 Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 4/60 (6%)

Query: 57  RVVAAQRMAAQVMRRRVVAVVRSDWAPNRNRPIQL----IWSRFFPSLNPPSDPSEPSGP 112
           R    Q +   V+  +V  +VR     + N P+ L     + RFFP LNPP +  +   P
Sbjct: 8   RAALVQNVQKAVVHIKVEKIVRGSDGRSFNNPMDLYNDEFFRRFFPELNPPKNNQQREQP 67


>UniRef100_Q8SB48 Putative polyprotein [Oryza sativa]
          Length = 931

 Score = 32.0 bits (71), Expect = 8.5
 Identities = 17/55 (30%), Positives = 29/55 (51%), Gaps = 1/55 (1%)

Query: 114 FGRGPVGFVQEVMVKENVHINIFDIQGAPLFYQWIVITSVVLGI-IDYDISLEYI 167
           F  G VG+ Q  M +E++H   F   GA   ++W+V+T  +  +   Y  ++ YI
Sbjct: 437 FMDGNVGYNQIFMAEEDIHKTTFTCPGAIGLFEWVVMTFGLKSVGATYQRAMNYI 491


  Database: uniref100
    Posted date:  Jan 5, 2005  1:24 AM
  Number of letters in database: 848,049,833
  Number of sequences in database:  2,790,947
  
Lambda     K      H
   0.326    0.143    0.432 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 324,649,167
Number of Sequences: 2790947
Number of extensions: 13074180
Number of successful extensions: 48478
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 48470
Number of HSP's gapped (non-prelim): 15
length of query: 189
length of database: 848,049,833
effective HSP length: 120
effective length of query: 69
effective length of database: 513,136,193
effective search space: 35406397317
effective search space used: 35406397317
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 71 (32.0 bits)