BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0051a.1
(226 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q5XVE7 Hypothetical protein [Arabidopsis thaliana] 68 2e-10
UniRef100_Q94DN4 P0483G10.9 protein [Oryza sativa] 66 6e-10
UniRef100_Q7XMF3 OSJNBa0061G20.6 protein [Oryza sativa] 54 4e-06
UniRef100_Q8LHV4 Replication protein-like [Oryza sativa] 52 9e-06
UniRef100_Q9FVZ6 Putative replication protein [Oryza sativa] 51 3e-05
UniRef100_Q8GSD3 DNA binding protein-like [Oryza sativa] 50 3e-05
UniRef100_Q5W672 Hypothetical protein OSJNBa0075A10.9 [Oryza sat... 49 8e-05
UniRef100_Q9LX59 Hypothetical protein F4M19_70 [Arabidopsis thal... 49 8e-05
UniRef100_Q8LRG4 B1008C01.13 protein [Oryza sativa] 49 8e-05
UniRef100_Q962V7 Replication protein A subunit 1 [Leishmania inf... 49 8e-05
UniRef100_Q6H6P5 Replication protein-like [Oryza sativa] 47 5e-04
UniRef100_Q6H6P4 Replication protein-like [Oryza sativa] 47 5e-04
UniRef100_Q6C5S2 Yarrowia lipolytica chromosome E of strain CLIB... 45 0.001
UniRef100_UPI00002447F2 UPI00002447F2 UniRef100 entry 45 0.002
UniRef100_Q7PXI6 ENSANGP00000015823 [Anopheles gambiae str. PEST] 45 0.002
UniRef100_Q92372 Replication factor-A protein 1 [Schizosaccharom... 45 0.002
UniRef100_Q23696 Replication factor A 51 kDa subunit [Crithidia ... 45 0.002
UniRef100_UPI00004999CD UPI00004999CD UniRef100 entry 44 0.002
UniRef100_UPI000023E596 UPI000023E596 UniRef100 entry 44 0.004
UniRef100_Q9FHV9 Replication protein A1-like protein [Arabidopsi... 44 0.004
>UniRef100_Q5XVE7 Hypothetical protein [Arabidopsis thaliana]
Length = 364
Score = 68.2 bits (165), Expect = 2e-10
Identities = 44/165 (26%), Positives = 80/165 (47%), Gaps = 15/165 (9%)
Query: 35 IYATIKKIESTNDWYYHDCECNSAAYS----------DGAQYYCEKCNKHVTPT-IRYKL 83
I A+I I++ W+Y C S + +Y CEKC+ VT T R+++
Sbjct: 103 IIASIFSIDTKVPWFYIGCNICFKKVSPYFNPETEEIEAGKYECEKCDTFVTTTSTRFRV 162
Query: 84 LLNVADDTASATFTVFYREGCYLMNKKGNEILEKMEKIGSMEHPPQEIVDLVHKEFLFKV 143
+ V D T A+F +F ++ L++K E+LE+ + + PQE++DL ++F+F +
Sbjct: 163 QVTVLDHTGEASFLLFDQDVIKLIHKSTYELLEQQVQFNRSDKIPQELLDLEGRQFVFTI 222
Query: 144 EGKNICGRWFNPAFNVLKICKDQQIISKFKTKTITKSVKRNTPPP 188
+G + F V ++ +I+ KF+ + + NT P
Sbjct: 223 QGSDSTKFSRPSIFRVYELTDKPEIVQKFQENLL----QMNTTDP 263
>UniRef100_Q94DN4 P0483G10.9 protein [Oryza sativa]
Length = 501
Score = 66.2 bits (160), Expect = 6e-10
Identities = 41/136 (30%), Positives = 67/136 (49%), Gaps = 5/136 (3%)
Query: 9 REVQEQCTILKSLPTKVQPQQRTIFIIYATIKKIESTNDWYYHDCE-CNSAAYSDGAQYY 67
++ E+ TI + L +R FI+ TIK I N W+Y+ C+ C + G+ Y
Sbjct: 316 QDTPEEKTIKEILKLNPHKYKRARFIVNVTIKSIHDENCWWYNSCDRCCRTSKPYGSTYR 375
Query: 68 CEKCNKHVTPTIRYKLLLNVADDTASATFTVFYREGCYLMNKKGNEILEKMEKIGSMEHP 127
C C P RYK++L AD+T+ A F +F R L+++ ++E+ +
Sbjct: 376 CSSCCYIGMPVPRYKVVLTTADNTSEAAFVLFGRIAHRLIHRPVESLIEE----NPPDFI 431
Query: 128 PQEIVDLVHKEFLFKV 143
P EI LV + F++ V
Sbjct: 432 PAEIQALVDQAFVWNV 447
>UniRef100_Q7XMF3 OSJNBa0061G20.6 protein [Oryza sativa]
Length = 1410
Score = 53.5 bits (127), Expect = 4e-06
Identities = 36/114 (31%), Positives = 56/114 (48%), Gaps = 7/114 (6%)
Query: 33 FIIYATIKKIESTNDWYYHDCE-CNSAAYSDGAQYYCE--KCNKHVTPTIRYKLLLNVAD 89
F++ TIKKI+ + W+Y C+ C A G Y C C V + R+KL L D
Sbjct: 848 FVVTVTIKKIDGS--WWYVACDRCRRTARPYGKTYRCGGGDCPATVPASPRFKLGLIAGD 905
Query: 90 DTASATFTVFYREGCYLMNKKGNEILEKMEKIGSMEHPPQEIVDLVHKEFLFKV 143
DTA F +F R ++ K +L+ + + P++I DL+ K+F + V
Sbjct: 906 DTADTKFVMFGRMAQRIIGKSVENLLD--QHPADEAYIPKQITDLLEKQFTWNV 957
>UniRef100_Q8LHV4 Replication protein-like [Oryza sativa]
Length = 640
Score = 52.4 bits (124), Expect = 9e-06
Identities = 40/135 (29%), Positives = 60/135 (43%), Gaps = 15/135 (11%)
Query: 33 FIIYATIKKIESTNDWYYHDCE-CNSAAYSDGAQYYCEKCNKHVTPTIRYKLLLNVADDT 91
F++ IKK+ W+Y C+ C A G+ Y R+KL + D T
Sbjct: 197 FLVTVVIKKLNMEYSWWYTACDICKKTAKPYGSSYS------------RFKLSVIAGDHT 244
Query: 92 ASATFTVFYREGCYLMNKKGNEILEKMEKIGSMEHPPQEIVDLVHKEFLFKVEGKNICGR 151
A TF VF R L+ + + ++ ME ++ P+EI DL+ KEF++ V
Sbjct: 245 ADTTFIVFGRLAQRLIGRSVDALV--MENPTGKDYIPREITDLLEKEFVWNVSFTENTVS 302
Query: 152 WFNPAFNVLKICKDQ 166
AF V KI K +
Sbjct: 303 SGIVAFQVNKIIKTE 317
>UniRef100_Q9FVZ6 Putative replication protein [Oryza sativa]
Length = 867
Score = 50.8 bits (120), Expect = 3e-05
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 14/111 (12%)
Query: 33 FIIYATIKKIESTNDWYYHDCECNSAAYSDGAQYYCEKCNKHVTPTIRYKLLLNVADDTA 92
F++ IKKI++ + W+Y C+ C++ K + R+KL L DDT
Sbjct: 200 FMVTVVIKKIDTESSWWYPACDS------------CKRTAKPYGKSYRFKLSLIAGDDTG 247
Query: 93 SATFTVFYREGCYLMNKKGNEILEKMEKIGSMEHPPQEIVDLVHKEFLFKV 143
F +F R ++ + +++ +E P+EI DL+ KEF + V
Sbjct: 248 DTKFVLFGRTAQRIIGRPVEMLIQ--NNPAGIEFIPKEITDLLEKEFTWNV 296
>UniRef100_Q8GSD3 DNA binding protein-like [Oryza sativa]
Length = 566
Score = 50.4 bits (119), Expect = 3e-05
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 1/103 (0%)
Query: 16 TILKSLPTKVQPQQRTIFIIYATIKKIESTNDWYYHDCE-CNSAAYSDGAQYYCEKCNKH 74
T+ + L +RT F TI+KI + + W+Y+ CE C G Y C C
Sbjct: 259 TVRELLDMNPHKNRRTRFQANVTIRKICNDSSWWYNSCEKCLRVVKPFGYTYKCTGCYNI 318
Query: 75 VTPTIRYKLLLNVADDTASATFTVFYREGCYLMNKKGNEILEK 117
RYKL + DDTA A F +F + ++ K ++E+
Sbjct: 319 AMAVPRYKLSVLAGDDTADAVFILFGKIAQRIVRKPVELLVEQ 361
>UniRef100_Q5W672 Hypothetical protein OSJNBa0075A10.9 [Oryza sativa]
Length = 820
Score = 49.3 bits (116), Expect = 8e-05
Identities = 33/119 (27%), Positives = 56/119 (46%), Gaps = 4/119 (3%)
Query: 28 QQRTIFIIYATIKKIESTNDWYYHDCECNSAAYSDGAQYYCEKCNKH-VTPTIRYKLLLN 86
Q+ I + A I++I+S N WY +C + Y C C K V P RY + L
Sbjct: 262 QKEFICTVKAKIEEIKSRNWWYMSCDKCFCGTRKESNVYICNSCGKEAVNPKPRYVINLE 321
Query: 87 VADDTASATFTVFYREGCYLMNKKG-NEILEKMEKIGSMEHPPQEIVDLVHKEFLFKVE 144
++D T T T+F E + K + +LE E+ G ++ P I + + +F+++
Sbjct: 322 ISDHTTRTTCTIFNEEAERIFGHKSVSTMLE--EQNGQIDMIPDTIRQICGRILIFRLK 378
>UniRef100_Q9LX59 Hypothetical protein F4M19_70 [Arabidopsis thaliana]
Length = 448
Score = 49.3 bits (116), Expect = 8e-05
Identities = 38/141 (26%), Positives = 62/141 (43%), Gaps = 23/141 (16%)
Query: 35 IYATIKKIESTNDWYYHDCE-CNSAAYSDGA------------QYYCEKCNKHVTPTI-R 80
+ TI I++ WYY C+ CN A +++C+ C VT I R
Sbjct: 212 VLCTIYAIDTDWAWYYISCKTCNKKVNHIHAGVHGVNNKGKKPRFWCDTCKTVVTNVIPR 271
Query: 81 YKLLLNVADDTASATFTVFYREGCYLMNKKGNEILE-KMEKIGSMEHPPQEIVDLVHKEF 139
Y L NV D+T A F +F L + +L+ ++++ E+ P+ + +L+ K F
Sbjct: 272 YMLYANVMDNTGEAKFLLFDSICSELTGESATSVLDGSLDEVVDPENLPEPVKNLIGKTF 331
Query: 140 LFKV--------EGKNICGRW 152
LF V +GK + W
Sbjct: 332 LFLVWVEKEHISDGKEVYKVW 352
>UniRef100_Q8LRG4 B1008C01.13 protein [Oryza sativa]
Length = 780
Score = 49.3 bits (116), Expect = 8e-05
Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 14/111 (12%)
Query: 33 FIIYATIKKIESTNDWYYHDCECNSAAYSDGAQYYCEKCNKHVTPTIRYKLLLNVADDTA 92
F++ IKKI++ + W+Y C+ C++ K + R KL L DDT
Sbjct: 200 FMVTVVIKKIDTESSWWYPACDT------------CKRTAKPYGKSYRIKLSLIAGDDTG 247
Query: 93 SATFTVFYREGCYLMNKKGNEILEKMEKIGSMEHPPQEIVDLVHKEFLFKV 143
F +F R ++ + +++ +E P+EI DL+ KEF + V
Sbjct: 248 DTKFVLFGRTAQRIIGRPVEMLIQ--NNPAGIEFIPKEITDLLEKEFTWNV 296
>UniRef100_Q962V7 Replication protein A subunit 1 [Leishmania infantum]
Length = 467
Score = 49.3 bits (116), Expect = 8e-05
Identities = 25/76 (32%), Positives = 38/76 (49%), Gaps = 3/76 (3%)
Query: 48 WYYHDCECNSAAYSDGAQ---YYCEKCNKHVTPTIRYKLLLNVADDTASATFTVFYREGC 104
WY CN +GAQ + CEKC+K VTPT RY + + V D+ + A T+F G
Sbjct: 309 WYDACPTCNKKVTEEGAQGDRFRCEKCDKTVTPTQRYLVSIQVTDNVSQAWLTLFNEAGI 368
Query: 105 YLMNKKGNEILEKMEK 120
+ E+ + ++
Sbjct: 369 EFFGMEAAELKRRAQE 384
>UniRef100_Q6H6P5 Replication protein-like [Oryza sativa]
Length = 197
Score = 46.6 bits (109), Expect = 5e-04
Identities = 24/91 (26%), Positives = 43/91 (46%), Gaps = 1/91 (1%)
Query: 10 EVQEQCTILKSLPTKVQPQQRTIFIIYATIKKIESTNDWYYHDCE-CNSAAYSDGAQYYC 68
EV E T+ + L ++ F + T+++I + W+Y C+ C A G+ Y C
Sbjct: 106 EVAENKTVRELLEINPHKCKKVRFQAHVTVRRICNDKCWWYGSCQRCFKVAKPYGSTYKC 165
Query: 69 EKCNKHVTPTIRYKLLLNVADDTASATFTVF 99
C+ RY++++ DD+ A F +F
Sbjct: 166 TSCSNIAVAVPRYRIVVIAGDDSDDAMFVLF 196
>UniRef100_Q6H6P4 Replication protein-like [Oryza sativa]
Length = 176
Score = 46.6 bits (109), Expect = 5e-04
Identities = 24/91 (26%), Positives = 43/91 (46%), Gaps = 1/91 (1%)
Query: 10 EVQEQCTILKSLPTKVQPQQRTIFIIYATIKKIESTNDWYYHDCE-CNSAAYSDGAQYYC 68
EV E T+ + L ++ F + T+++I + W+Y C+ C A G+ Y C
Sbjct: 85 EVAENKTVRELLEINPHKCKKVRFQAHVTVRRICNDKCWWYGSCQRCFKVAKPYGSTYKC 144
Query: 69 EKCNKHVTPTIRYKLLLNVADDTASATFTVF 99
C+ RY++++ DD+ A F +F
Sbjct: 145 TSCSNIAVAVPRYRIVVIAGDDSDDAMFVLF 175
>UniRef100_Q6C5S2 Yarrowia lipolytica chromosome E of strain CLIB99 of Yarrowia
lipolytica [Yarrowia lipolytica]
Length = 589
Score = 45.1 bits (105), Expect = 0.001
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 5/106 (4%)
Query: 45 TNDWYYHDCE---CNSAAYSDGAQYYCEKCNKHV-TPTIRYKLLLNVADDTASATFTVFY 100
T ++ Y C+ CN G ++ CEKC K++ P RY L +NV D T S T F
Sbjct: 448 TGNFAYPACQTPDCNKKVVEHGDEWRCEKCEKNMDKPLYRYILSINVGDATGSMWLTAFN 507
Query: 101 REGCYLMNKKGNEILEKMEKIGSMEHPPQEIVDLVHKEFLFKVEGK 146
+M +++ E G E Q + + K++ + K
Sbjct: 508 EPAEVIMGMTADQLTEIQTSQGDDEF-EQAVQKVTGKQYTLRCRSK 552
>UniRef100_UPI00002447F2 UPI00002447F2 UniRef100 entry
Length = 612
Score = 44.7 bits (104), Expect = 0.002
Identities = 35/119 (29%), Positives = 53/119 (44%), Gaps = 8/119 (6%)
Query: 33 FIIYATIKKIESTNDWYYH--DCECNSAAYS-DGAQYYCEKCNKHVTPTIRYKLLLN--V 87
F + A I I+S N Y +CN + Q+ CEKCN P +Y+LL+N +
Sbjct: 455 FQVKAMIHTIKSANAVYKACPQADCNKKVIDQENGQFRCEKCNAEF-PNFKYRLLVNMLI 513
Query: 88 ADDTASATFTVFYREGCYLMNKKGNEILEKMEKIGSMEHPPQEIVDLVHKEFLFKVEGK 146
D T++ TVF ++ K EI +E E + + K F+FK+ K
Sbjct: 514 GDWTSNRWVTVFTELAEEMLGKSSQEIGSSLEY--QKEEAEKLFTSISFKSFVFKLRTK 570
>UniRef100_Q7PXI6 ENSANGP00000015823 [Anopheles gambiae str. PEST]
Length = 614
Score = 44.7 bits (104), Expect = 0.002
Identities = 35/119 (29%), Positives = 53/119 (44%), Gaps = 8/119 (6%)
Query: 33 FIIYATIKKIESTNDWYYH--DCECNSAAYS-DGAQYYCEKCNKHVTPTIRYKLLLN--V 87
F + A I I+S N Y +CN + Q+ CEKCN P +Y+LL+N +
Sbjct: 457 FQVKAMIHTIKSANAVYKACPQADCNKKVIDQENGQFRCEKCNAEF-PNFKYRLLVNMLI 515
Query: 88 ADDTASATFTVFYREGCYLMNKKGNEILEKMEKIGSMEHPPQEIVDLVHKEFLFKVEGK 146
D T++ TVF ++ K EI +E E + + K F+FK+ K
Sbjct: 516 GDWTSNRWVTVFTELAEEMLGKSSQEIGSSLEY--QKEEAEKLFTSISFKSFVFKLRTK 572
>UniRef100_Q92372 Replication factor-A protein 1 [Schizosaccharomyces pombe]
Length = 609
Score = 44.7 bits (104), Expect = 0.002
Identities = 22/67 (32%), Positives = 33/67 (48%), Gaps = 1/67 (1%)
Query: 54 ECNSAAYSDGAQYYCEKCNK-HVTPTIRYKLLLNVADDTASATFTVFYREGCYLMNKKGN 112
+CN + G + CEKCNK + P RY + + V D T VF G +M+K +
Sbjct: 481 DCNKKVFDQGGSWRCEKCNKEYDAPQYRYIITIAVGDHTGQLWLNVFDDVGKLIMHKTAD 540
Query: 113 EILEKME 119
E+ + E
Sbjct: 541 ELNDLQE 547
>UniRef100_Q23696 Replication factor A 51 kDa subunit [Crithidia fasciculata]
Length = 467
Score = 44.7 bits (104), Expect = 0.002
Identities = 22/76 (28%), Positives = 36/76 (46%), Gaps = 3/76 (3%)
Query: 48 WYYHDCECNSAAYSDGAQ---YYCEKCNKHVTPTIRYKLLLNVADDTASATFTVFYREGC 104
WY CN +GAQ + CEKC+ V PT RY + + V D+ + T+F G
Sbjct: 309 WYDACPTCNKKVTEEGAQGDRFRCEKCDATVVPTQRYLVSIQVTDNVSQVWLTLFNEAGV 368
Query: 105 YLMNKKGNEILEKMEK 120
+ +E+ + ++
Sbjct: 369 EFFGMEASELKRRAQE 384
>UniRef100_UPI00004999CD UPI00004999CD UniRef100 entry
Length = 569
Score = 44.3 bits (103), Expect = 0.002
Identities = 36/118 (30%), Positives = 57/118 (47%), Gaps = 11/118 (9%)
Query: 33 FIIYATIKKIESTNDWYYHDCECNSAAYSDGAQYYCEKCNKHVTPTIRYK---LLLNVAD 89
FII A IK I+ TND Y+ CE + +G YC KCN+ + YK LL N +
Sbjct: 440 FIIKARIKIIK-TNDLTYYGCETCRSKKEEGYS-YCNKCNRKRNGKLYYKVNVLLENNEE 497
Query: 90 DTASATFTVFYRE-GCYLMNKKGNEILEKMEKIGSMEHPPQEIVDLVHKEFLFKVEGK 146
+ + + + + E L N +E+ + + +E+ + KEF+ KV+GK
Sbjct: 498 EESFEQWAIIFDECARKLFNMSADEM-----NVLDEDDVKKEMNKFIGKEFILKVKGK 550
>UniRef100_UPI000023E596 UPI000023E596 UniRef100 entry
Length = 607
Score = 43.5 bits (101), Expect = 0.004
Identities = 32/92 (34%), Positives = 42/92 (44%), Gaps = 6/92 (6%)
Query: 33 FIIYATIKKIESTNDWYY----HDCECNSAAYSDGAQYYCEKCN-KHVTPTIRYKLLLNV 87
+ I ATI ++ N Y C DG + CEKCN H P RY L LNV
Sbjct: 451 YTIKATIVFVKQENFCYAACLSQGCNKKVTQMPDGT-WQCEKCNLSHEKPEYRYVLSLNV 509
Query: 88 ADDTASATFTVFYREGCYLMNKKGNEILEKME 119
AD T+ T F G +M + +E++E E
Sbjct: 510 ADHTSHQWLTGFDDFGRQVMGRTADEMMELKE 541
>UniRef100_Q9FHV9 Replication protein A1-like protein [Arabidopsis thaliana]
Length = 543
Score = 43.5 bits (101), Expect = 0.004
Identities = 39/135 (28%), Positives = 59/135 (42%), Gaps = 19/135 (14%)
Query: 35 IYATIKKIESTNDWYYHDC-ECN------SAAYSDGA--------QYYCEKCNKHVTPT- 78
I +I I++ W+Y C +CN + S G +++C+KC + +T
Sbjct: 265 ILGSIFAIDTDWGWFYFGCPKCNRKTELVKESTSTGKMVKTPMKPKFWCDKCQESITNVE 324
Query: 79 IRYKLLLNVADDTASATFTVFYREGCYLMNKKGNEILE-KMEKIGSMEHPPQEIVDLVHK 137
RYKL + V D TA VF L+ K E+++ + E+I I +L K
Sbjct: 325 ARYKLHVRVMDQTAEIKLMVFENNATKLIGKSSEELVDGQYEEIKDPTIISDVITNLCGK 384
Query: 138 --EFLFKVEGKNICG 150
FL VE NI G
Sbjct: 385 TFHFLVSVEKANIYG 399
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.318 0.134 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 387,110,157
Number of Sequences: 2790947
Number of extensions: 15736082
Number of successful extensions: 44235
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 57
Number of HSP's that attempted gapping in prelim test: 44182
Number of HSP's gapped (non-prelim): 85
length of query: 226
length of database: 848,049,833
effective HSP length: 123
effective length of query: 103
effective length of database: 504,763,352
effective search space: 51990625256
effective search space used: 51990625256
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 72 (32.3 bits)
Lotus: description of TM0051a.1