BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0050.14
(77 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_UPI000049A062 UPI000049A062 UniRef100 entry 106 2e-22
UniRef100_Q9M613 26S proteasome regulatory subunit 8 [Pinus taeda] 106 2e-22
UniRef100_Q9FNU8 26S proteasome RPT6a subunit [Dactylis glomerata] 106 2e-22
UniRef100_Q9C5U3 AtSUG1 protein [Arabidopsis thaliana] 106 2e-22
UniRef100_Q94BQ2 26S proteasome AAA-ATPase subunit RPT6a-like pr... 106 2e-22
UniRef100_Q7XYC4 26S proteasome ATPase subunit [Triticum aestivum] 106 2e-22
UniRef100_Q7GCH3 26S proteasome regulatory particle triple-A ATP... 106 2e-22
UniRef100_Q69X47 Putative 26S proteasome regulatory particle tri... 106 2e-22
UniRef100_P34124 26S protease regulatory subunit 8 [Dictyosteliu... 106 2e-22
UniRef100_Q7YY47 26s protease regulatory subunit 8, probable [Cr... 105 3e-22
UniRef100_UPI0000365CEA UPI0000365CEA UniRef100 entry 104 5e-22
UniRef100_UPI00003AC8A4 UPI00003AC8A4 UniRef100 entry 104 5e-22
UniRef100_UPI0000337ABF UPI0000337ABF UniRef100 entry 104 5e-22
UniRef100_Q6P380 Hypothetical protein MGC75584 [Xenopus tropicalis] 104 5e-22
UniRef100_Q6GQB7 MGC80185 protein [Xenopus laevis] 104 5e-22
UniRef100_Q6AZU7 Hypothetical protein [Xenopus laevis] 104 5e-22
UniRef100_Q6AZC1 Zgc:92464 [Brachydanio rerio] 104 5e-22
UniRef100_Q99KR1 Psmc5 protein [Mus musculus] 104 5e-22
UniRef100_Q8K1K2 Psmc5 protein [Mus musculus] 104 5e-22
UniRef100_Q5R9X8 Hypothetical protein DKFZp469N241 [Pongo pygmaeus] 104 5e-22
>UniRef100_UPI000049A062 UPI000049A062 UniRef100 entry
Length = 398
Score = 106 bits (264), Expect = 2e-22
Identities = 51/56 (91%), Positives = 53/56 (94%)
Query: 8 ILQVIEVPIKHPELFESPGIAQPKGVLLYGPPGTRKTLLARAVAHHTDCTFIRVSG 63
I +VIE+PIKHPELFES GIAQPKGVLLYGPPGT KTLLARAVAHHTDCTFIRVSG
Sbjct: 153 IKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSG 208
>UniRef100_Q9M613 26S proteasome regulatory subunit 8 [Pinus taeda]
Length = 433
Score = 106 bits (264), Expect = 2e-22
Identities = 51/56 (91%), Positives = 53/56 (94%)
Query: 8 ILQVIEVPIKHPELFESPGIAQPKGVLLYGPPGTRKTLLARAVAHHTDCTFIRVSG 63
I +VIE+PIKHPELFES GIAQPKGVLLYGPPGT KTLLARAVAHHTDCTFIRVSG
Sbjct: 187 IKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSG 242
>UniRef100_Q9FNU8 26S proteasome RPT6a subunit [Dactylis glomerata]
Length = 452
Score = 106 bits (264), Expect = 2e-22
Identities = 51/56 (91%), Positives = 53/56 (94%)
Query: 8 ILQVIEVPIKHPELFESPGIAQPKGVLLYGPPGTRKTLLARAVAHHTDCTFIRVSG 63
I +VIE+PIKHPELFES GIAQPKGVLLYGPPGT KTLLARAVAHHTDCTFIRVSG
Sbjct: 206 IKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSG 261
>UniRef100_Q9C5U3 AtSUG1 protein [Arabidopsis thaliana]
Length = 419
Score = 106 bits (264), Expect = 2e-22
Identities = 51/56 (91%), Positives = 53/56 (94%)
Query: 8 ILQVIEVPIKHPELFESPGIAQPKGVLLYGPPGTRKTLLARAVAHHTDCTFIRVSG 63
I +VIE+PIKHPELFES GIAQPKGVLLYGPPGT KTLLARAVAHHTDCTFIRVSG
Sbjct: 173 IKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSG 228
>UniRef100_Q94BQ2 26S proteasome AAA-ATPase subunit RPT6a-like protein [Arabidopsis
thaliana]
Length = 419
Score = 106 bits (264), Expect = 2e-22
Identities = 51/56 (91%), Positives = 53/56 (94%)
Query: 8 ILQVIEVPIKHPELFESPGIAQPKGVLLYGPPGTRKTLLARAVAHHTDCTFIRVSG 63
I +VIE+PIKHPELFES GIAQPKGVLLYGPPGT KTLLARAVAHHTDCTFIRVSG
Sbjct: 173 IKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSG 228
>UniRef100_Q7XYC4 26S proteasome ATPase subunit [Triticum aestivum]
Length = 284
Score = 106 bits (264), Expect = 2e-22
Identities = 51/56 (91%), Positives = 53/56 (94%)
Query: 8 ILQVIEVPIKHPELFESPGIAQPKGVLLYGPPGTRKTLLARAVAHHTDCTFIRVSG 63
I +VIE+PIKHPELFES GIAQPKGVLLYGPPGT KTLLARAVAHHTDCTFIRVSG
Sbjct: 135 IKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSG 190
>UniRef100_Q7GCH3 26S proteasome regulatory particle triple-A ATPase subunit6 [Oryza
sativa]
Length = 424
Score = 106 bits (264), Expect = 2e-22
Identities = 51/56 (91%), Positives = 53/56 (94%)
Query: 8 ILQVIEVPIKHPELFESPGIAQPKGVLLYGPPGTRKTLLARAVAHHTDCTFIRVSG 63
I +VIE+PIKHPELFES GIAQPKGVLLYGPPGT KTLLARAVAHHTDCTFIRVSG
Sbjct: 178 IKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSG 233
>UniRef100_Q69X47 Putative 26S proteasome regulatory particle triple-A ATPase
subunit6 [Oryza sativa]
Length = 423
Score = 106 bits (264), Expect = 2e-22
Identities = 51/56 (91%), Positives = 53/56 (94%)
Query: 8 ILQVIEVPIKHPELFESPGIAQPKGVLLYGPPGTRKTLLARAVAHHTDCTFIRVSG 63
I +VIE+PIKHPELFES GIAQPKGVLLYGPPGT KTLLARAVAHHTDCTFIRVSG
Sbjct: 177 IKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSG 232
>UniRef100_P34124 26S protease regulatory subunit 8 [Dictyostelium discoideum]
Length = 389
Score = 106 bits (264), Expect = 2e-22
Identities = 51/56 (91%), Positives = 53/56 (94%)
Query: 8 ILQVIEVPIKHPELFESPGIAQPKGVLLYGPPGTRKTLLARAVAHHTDCTFIRVSG 63
I +VIE+PIKHPELFES GIAQPKGVLLYGPPGT KTLLARAVAHHTDCTFIRVSG
Sbjct: 143 IKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSG 198
>UniRef100_Q7YY47 26s protease regulatory subunit 8, probable [Cryptosporidium
parvum]
Length = 393
Score = 105 bits (262), Expect = 3e-22
Identities = 50/56 (89%), Positives = 53/56 (94%)
Query: 8 ILQVIEVPIKHPELFESPGIAQPKGVLLYGPPGTRKTLLARAVAHHTDCTFIRVSG 63
I +VIE+PIKHPE+FES GIAQPKGVLLYGPPGT KTLLARAVAHHTDCTFIRVSG
Sbjct: 149 IKEVIELPIKHPEIFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSG 204
>UniRef100_UPI0000365CEA UPI0000365CEA UniRef100 entry
Length = 399
Score = 104 bits (260), Expect = 5e-22
Identities = 49/56 (87%), Positives = 53/56 (94%)
Query: 8 ILQVIEVPIKHPELFESPGIAQPKGVLLYGPPGTRKTLLARAVAHHTDCTFIRVSG 63
I +VIE+P+KHPELFE+ GIAQPKGVLLYGPPGT KTLLARAVAHHTDCTFIRVSG
Sbjct: 154 IKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSG 209
>UniRef100_UPI00003AC8A4 UPI00003AC8A4 UniRef100 entry
Length = 411
Score = 104 bits (260), Expect = 5e-22
Identities = 49/56 (87%), Positives = 53/56 (94%)
Query: 8 ILQVIEVPIKHPELFESPGIAQPKGVLLYGPPGTRKTLLARAVAHHTDCTFIRVSG 63
I +VIE+P+KHPELFE+ GIAQPKGVLLYGPPGT KTLLARAVAHHTDCTFIRVSG
Sbjct: 166 IKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSG 221
>UniRef100_UPI0000337ABF UPI0000337ABF UniRef100 entry
Length = 406
Score = 104 bits (260), Expect = 5e-22
Identities = 49/56 (87%), Positives = 53/56 (94%)
Query: 8 ILQVIEVPIKHPELFESPGIAQPKGVLLYGPPGTRKTLLARAVAHHTDCTFIRVSG 63
I +VIE+P+KHPELFE+ GIAQPKGVLLYGPPGT KTLLARAVAHHTDCTFIRVSG
Sbjct: 161 IKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSG 216
>UniRef100_Q6P380 Hypothetical protein MGC75584 [Xenopus tropicalis]
Length = 414
Score = 104 bits (260), Expect = 5e-22
Identities = 49/56 (87%), Positives = 53/56 (94%)
Query: 8 ILQVIEVPIKHPELFESPGIAQPKGVLLYGPPGTRKTLLARAVAHHTDCTFIRVSG 63
I +VIE+P+KHPELFE+ GIAQPKGVLLYGPPGT KTLLARAVAHHTDCTFIRVSG
Sbjct: 169 IKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSG 224
>UniRef100_Q6GQB7 MGC80185 protein [Xenopus laevis]
Length = 415
Score = 104 bits (260), Expect = 5e-22
Identities = 49/56 (87%), Positives = 53/56 (94%)
Query: 8 ILQVIEVPIKHPELFESPGIAQPKGVLLYGPPGTRKTLLARAVAHHTDCTFIRVSG 63
I +VIE+P+KHPELFE+ GIAQPKGVLLYGPPGT KTLLARAVAHHTDCTFIRVSG
Sbjct: 170 IKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSG 225
>UniRef100_Q6AZU7 Hypothetical protein [Xenopus laevis]
Length = 414
Score = 104 bits (260), Expect = 5e-22
Identities = 49/56 (87%), Positives = 53/56 (94%)
Query: 8 ILQVIEVPIKHPELFESPGIAQPKGVLLYGPPGTRKTLLARAVAHHTDCTFIRVSG 63
I +VIE+P+KHPELFE+ GIAQPKGVLLYGPPGT KTLLARAVAHHTDCTFIRVSG
Sbjct: 169 IKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSG 224
>UniRef100_Q6AZC1 Zgc:92464 [Brachydanio rerio]
Length = 406
Score = 104 bits (260), Expect = 5e-22
Identities = 49/56 (87%), Positives = 53/56 (94%)
Query: 8 ILQVIEVPIKHPELFESPGIAQPKGVLLYGPPGTRKTLLARAVAHHTDCTFIRVSG 63
I +VIE+P+KHPELFE+ GIAQPKGVLLYGPPGT KTLLARAVAHHTDCTFIRVSG
Sbjct: 161 IKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSG 216
>UniRef100_Q99KR1 Psmc5 protein [Mus musculus]
Length = 306
Score = 104 bits (260), Expect = 5e-22
Identities = 49/56 (87%), Positives = 53/56 (94%)
Query: 8 ILQVIEVPIKHPELFESPGIAQPKGVLLYGPPGTRKTLLARAVAHHTDCTFIRVSG 63
I +VIE+P+KHPELFE+ GIAQPKGVLLYGPPGT KTLLARAVAHHTDCTFIRVSG
Sbjct: 61 IKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSG 116
>UniRef100_Q8K1K2 Psmc5 protein [Mus musculus]
Length = 348
Score = 104 bits (260), Expect = 5e-22
Identities = 49/56 (87%), Positives = 53/56 (94%)
Query: 8 ILQVIEVPIKHPELFESPGIAQPKGVLLYGPPGTRKTLLARAVAHHTDCTFIRVSG 63
I +VIE+P+KHPELFE+ GIAQPKGVLLYGPPGT KTLLARAVAHHTDCTFIRVSG
Sbjct: 161 IKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSG 216
>UniRef100_Q5R9X8 Hypothetical protein DKFZp469N241 [Pongo pygmaeus]
Length = 398
Score = 104 bits (260), Expect = 5e-22
Identities = 49/56 (87%), Positives = 53/56 (94%)
Query: 8 ILQVIEVPIKHPELFESPGIAQPKGVLLYGPPGTRKTLLARAVAHHTDCTFIRVSG 63
I +VIE+P+KHPELFE+ GIAQPKGVLLYGPPGT KTLLARAVAHHTDCTFIRVSG
Sbjct: 153 IKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSG 208
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.322 0.138 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 133,797,248
Number of Sequences: 2790947
Number of extensions: 4550771
Number of successful extensions: 18032
Number of sequences better than 10.0: 2833
Number of HSP's better than 10.0 without gapping: 2779
Number of HSP's successfully gapped in prelim test: 55
Number of HSP's that attempted gapping in prelim test: 14879
Number of HSP's gapped (non-prelim): 3156
length of query: 77
length of database: 848,049,833
effective HSP length: 53
effective length of query: 24
effective length of database: 700,129,642
effective search space: 16803111408
effective search space used: 16803111408
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 68 (30.8 bits)
Lotus: description of TM0050.14