BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0044a.5
(578 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q94FM0 Pol polyprotein [Citrus paradisi] 454 e-126
UniRef100_Q6L3L8 Putative polyprotein [Solanum demissum] 439 e-121
UniRef100_Q8S476 Putative Fourf gag/pol protein [Zea mays] 413 e-114
UniRef100_Q75GS3 Putative integrase [Oryza sativa] 407 e-112
UniRef100_Q8S7H7 Putative polyprotein [Oryza sativa] 407 e-112
UniRef100_Q7XDW3 Putative polyprotein [Oryza sativa] 406 e-112
UniRef100_Q8RZ02 Putative gag-pol polyprotein [Oryza sativa] 402 e-110
UniRef100_Q9FWU0 Putative gag-pol polyprotein [Oryza sativa] 400 e-110
UniRef100_Q7XLA2 OSJNBb0115I09.10 protein [Oryza sativa] 400 e-110
UniRef100_Q6L485 Putative polyprotein [Oryza sativa] 397 e-109
UniRef100_Q7XM54 OSJNBb0018J12.5 protein [Oryza sativa] 397 e-109
UniRef100_Q84RZ7 Hypothetical polyprotein [Oryza sativa] 396 e-108
UniRef100_Q6F2U1 Putative polyprotein [Oryza sativa] 396 e-108
UniRef100_Q8LJ12 Putative gag and pol [Oryza sativa] 395 e-108
UniRef100_Q6F2M4 Putative polyprotein [Oryza sativa] 395 e-108
UniRef100_Q6AT91 Putative polyprotein [Oryza sativa] 395 e-108
UniRef100_Q8RYS5 Putative polyprotein [Oryza sativa] 395 e-108
UniRef100_Q8RU93 Putative polyprotein from transposon TNT 1-94 [... 395 e-108
UniRef100_Q8H7V4 Putative polyprotein from transposon TNT [Oryza... 395 e-108
UniRef100_Q84ME8 Putative polyprotein [Oryza sativa] 395 e-108
>UniRef100_Q94FM0 Pol polyprotein [Citrus paradisi]
Length = 701
Score = 454 bits (1168), Expect = e-126
Identities = 240/585 (41%), Positives = 367/585 (62%), Gaps = 32/585 (5%)
Query: 9 DRFDGTNFTRWQDKMIFLLTALKIYYVLDPDLTPIAEPKDDDSD-ELKTERKKRREDELL 67
++F+G NF RWQ KM F LT L + L D +PK+ ++D ++ + + L
Sbjct: 43 EKFNGQNFKRWQQKMFFYLTTLNLARFLTKDAP---KPKEGETDIQVASAIDAWHHSDFL 99
Query: 68 CRGHIMNTLSDRLYDLYTDTQSAAKIWKTLEFKFKAEEEGIKKFLISKYFDFKMLDTKPI 127
C+ ++MN LSD LY++Y ++A ++W++L+ K+K E+ G KKF++ ++ DFKM+D+K +
Sbjct: 100 CKNYVMNGLSDSLYNVYIGKKTAKELWESLDRKYKTEDAGTKKFVVGRFLDFKMVDSKTV 159
Query: 128 LQQVHELQVLVNKIKAVKIDIRGAFQVGAIIAKLPPSWNGYRKKLLHNYEDFSLEKIQKH 187
+ QV ELQ+++++I A + + FQV AII KLPP+W ++ L H ++ ++E +
Sbjct: 160 ISQVQELQIILSEILAEGMHLSETFQVAAIIEKLPPAWKDFKSYLKHKQKEMNIEGLVVK 219
Query: 188 LRIEEESKVRDKAESSGFSKANTVTTKGKKKYDGKQQHLGPK----KEHNKFKNNNGTKG 243
LRIEE+++ ++ + +KAN V KK K++ LGPK K+ KF
Sbjct: 220 LRIEEDNRNAERIGAISMAKANFVEHGPKK----KKKKLGPKGGISKKQTKF-------- 267
Query: 244 PKGGCYVCGKPDHFARDCRQNKTKKEVNAVQ------VDDEIIATVSEVMAVKGKVPGWW 297
+G CY C K H A DCR K K+E N V+ D + A V EV V WW
Sbjct: 268 -QGKCYNCDKMGHKASDCRLPKKKREANVVENITQHVSDINLSAVVLEVNMVGSNPREWW 326
Query: 298 YDTCASVHVSYDKASFKTYSESTDDQEVQMRNEVRSKVVGTGTVELNFTSGKKVTLVNVL 357
DT A+ HV DK F ++ +++ +++ M N S++ G G V L TSGK++TL NVL
Sbjct: 327 IDTGATRHVCSDKGLFTSFEAASNREKLFMGNSATSEIEGQGKVALKMTSGKELTLNNVL 386
Query: 358 HVPEMSRDLVSGDLLGKPGIKSVYESEKLILTRNGVFVGKGYSAEGMIKLCPI---DNII 414
+VPE+ ++LVSG LL K G + V+ES+ ++L++NG++VGKGY +G+ KL + I
Sbjct: 387 YVPEIRKNLVSGSLLNKHGFRMVFESDMVVLSKNGMYVGKGYVNDGLFKLNVMTLKPTIN 446
Query: 415 NKVSNSAYMIDSVSLWHSRLAHIGISTMNRLIKSKLI-SCNIHEFEKCEICVKSKMIKKH 473
NK ++SAY+++S ++WH RL H+ +++ +LI K I + I KC+ CV++K+ +
Sbjct: 447 NKATSSAYLLESSNIWHGRLGHVNFNSLRKLINMKHIPNFQIDLKHKCKTCVEAKLTRSS 506
Query: 474 FKSVERKFNLLDLVHSDLCEFNGMLTRGGNRYFITFIDDCSRYTHVYLLKHKDDAFNAFK 533
F+ ++R LDL+HSD+C+F + TRGGN+YFITFIDDC++Y +VYLLK KD+A + F
Sbjct: 507 FQIIQRNSEPLDLIHSDICDFKSIQTRGGNKYFITFIDDCTKYCYVYLLKSKDEALDKFI 566
Query: 534 SYKAEVENQLNKTIKVLRSDRGGEYFSTKFDSFCEEHDIIHECSA 578
YK EVENQLN+ IK LRSDRGGEY F S CE+ IIH+ +A
Sbjct: 567 LYKNEVENQLNRKIKELRSDRGGEYV-VPFMSLCEQSGIIHQVTA 610
>UniRef100_Q6L3L8 Putative polyprotein [Solanum demissum]
Length = 1279
Score = 439 bits (1128), Expect = e-121
Identities = 241/597 (40%), Positives = 353/597 (58%), Gaps = 32/597 (5%)
Query: 4 DLVKLDRFDGTNFTRWQDKMIFLLTALKIYYVL---DPDLTPIAEPKDDDSDELKTERKK 60
DL K RF+G +F RW+ K++F L+ L + YVL +P+ + +DD+ +K
Sbjct: 14 DLNKPFRFNGNHFKRWKGKVLFYLSLLNVSYVLTEKNPNKVDDSSMEDDELISHHENVEK 73
Query: 61 RREDELLCRGHIMNTLSDRLYDLYTDTQSAAK-IWKTLEFKFKAEEEGIKKFLISKYFDF 119
D CR +++N LSD YD Y T S+AK IWK L+ K+ EE G KK+ S++F F
Sbjct: 74 YNGDSYKCRYYLLNCLSDNFYDYYDRTYSSAKKIWKALQSKYDTEEAGAKKYAASRFFRF 133
Query: 120 KMLDTKPILQQVHELQVLVNKIKAVKIDIRGAFQVGAIIAKLPPSWNGYRKKLLHNYEDF 179
+M+D K ++ Q + ++V ++++ ++ I V I+ KLPPSW ++K + H ++
Sbjct: 134 QMVDNKSVVDQAQDFIMIVGELRSEEVKIGDNLIVCGIVDKLPPSWKEFQKTMRHKQKET 193
Query: 180 SLEKIQKHLRIEEESKVRDKA----ESSGFSKANTVTTKGKKKYDGKQQHLGPKKEHNKF 235
SLE + +R+EEE++ +D E++ +K N +T+ K L PKK+ KF
Sbjct: 194 SLETLIMKIRMEEEARGQDALLQTEENNITTKVNLITSNNATPESHKNTSLKPKKK--KF 251
Query: 236 KNNNGTKGPK----------------GGCYVCGKPDHFARDCRQNKTKKEVNAVQVDDEI 279
K NNG K G C+VCGK H AR CR K A ++
Sbjct: 252 KKNNGRPPKKNNGENIQAQNQQVQDKGPCFVCGKSGHIARFCRFRKRGPNPQANVTEEPF 311
Query: 280 IATVSEVMAVKGKVPGWWYDTCASVHVSYDKASFKTYSESTDDQEVQMRNEVRSKVVGTG 339
+A ++++ V+ V GWW D+ A+ HV YDK FK Y+ + + + + + ++V+GTG
Sbjct: 312 VAVITDINMVEN-VDGWWADSGANRHVCYDKDWFKKYTHFEEPKTIMLGDSHTTQVLGTG 370
Query: 340 TVELNFTSGKKVTLVNVLHVPEMSRDLVSGDLLGKPGIKSVYESEKLILTRNGVFVGKGY 399
VEL FTSG+ +TL +VL+ P M + L+S LL K G K + ES + ++ + G+FVGKGY
Sbjct: 371 DVELCFTSGRVLTLKDVLYTPSMRKKLMSSFLLNKAGFKQIIESNQYVIVKKGIFVGKGY 430
Query: 400 SAEGMIKLCPIDNI-INKVSNSAYMIDSVSLWHSRLAHIGISTMNRLIKSKLISCNIHEF 458
+ +GM KL N+ +NK S S YM+ S + WH+RL HI + + LI F
Sbjct: 431 ACDGMFKL----NVEMNKTSTSVYMLSSTNFWHARLCHINDRYVGIMSSLGLIPMIKKNF 486
Query: 459 EKCEICVKSKMIKKHFKSVERKFNLLDLVHSDLCEFNGMLTRGGNRYFITFIDDCSRYTH 518
EKCE C K+K+ K+ VERK +LL+LVH+D+CE G+LTRGGNRYFITFIDD S++T+
Sbjct: 487 EKCEACSKAKITKRPHFQVERKTDLLELVHTDICELGGILTRGGNRYFITFIDDFSKFTY 546
Query: 519 VYLLKHKDDAFNAFKSYKAEVENQLNKTIKVLRSDRGGEYFSTKFDSFCEEHDIIHE 575
VYL+K+K DAF FK+Y EVENQ + IK +RSDRG EY S +F+SF IIHE
Sbjct: 547 VYLMKNKSDAFENFKTYLHEVENQFGRKIKRIRSDRGREYESNEFNSFVRSLGIIHE 603
>UniRef100_Q8S476 Putative Fourf gag/pol protein [Zea mays]
Length = 1292
Score = 413 bits (1062), Expect = e-114
Identities = 232/586 (39%), Positives = 332/586 (56%), Gaps = 28/586 (4%)
Query: 5 LVKLDRFDGTNFTRWQDKMIFLLTALKIYYVLDPDLTPIAEPKDDDSDELKTERKKRRED 64
++K D FDG NF W+ KM LTA+ ++ + P P +D E K + ED
Sbjct: 23 VLKPDPFDGKNFLIWKAKMELWLTAMSCFHAAEGK--PANLPPED-------EAKFKAED 73
Query: 65 ELLCRGHIMNTLSDRLYDLYTDTQSAAKIWKTLEFKFKAEEEGIKKFLISKYFDFKMLDT 124
L RG +++ L + Y + ++W L KF + G + +L+ + +D+KM++
Sbjct: 74 NLF-RGAVISALDTKFQKSYIILPTGKELWDALVGKFGVTDAGSELYLMEQLYDYKMVEN 132
Query: 125 KPILQQVHELQVLVNKIKAVKIDIRGAFQVGAIIAKLPPSWNGYRKKLLHNYEDFSLEKI 184
+ +++Q HE Q L +++ + F G IIAKLPPSW + L H ++F++E++
Sbjct: 133 RSVVEQAHEFQALAKELELFPCPLPDKFVAGGIIAKLPPSWKDFATSLKHKRQEFNVEEL 192
Query: 185 QKHLRIEEESKVRDKAESSGFSKANTVTTKG-----KKKYDGKQQHLGPKKEHNKFKNNN 239
L +EE ++ +D + S AN V + KKK KQ++ +FK N
Sbjct: 193 IGTLDVEERARTKDSGKGVETSTANVVQKRNFRKFNKKKNQNKQENANKPVHTAQFKKKN 252
Query: 240 GTKGPKGGCYVCGKPDHFARDCRQNK---TKKEVNAVQVDDEIIAT-----VSEVMAVKG 291
KGGC+VCG H+AR+C K KK N V + E + + V++V
Sbjct: 253 NNNKGKGGCFVCGSDQHWARECPDRKFTQDKKSANVVTTETEEGTSGYGNSLPFVLSVCN 312
Query: 292 KVPGWWYDTCASVHVSYDKASFKTYSESTDDQEVQMRNEVRSKVVGTGTVELNFTSGKKV 351
P WW D+ A++HV D + F +Y + M N R+ V+G GTV L FTSGK V
Sbjct: 313 S-PEWWMDSGANIHVCADASMFTSYQVGRSGA-LLMGNGSRAHVLGVGTVILKFTSGKTV 370
Query: 352 TLVNVLHVPEMSRDLVSGDLLGKPGIKSVYESEKLILTRNGVFVGKGYSAEGMIKLCPID 411
L +V HVP + ++LVS +L + G K V ES K +++++G FVGKGY G+ +L +
Sbjct: 371 PLKSVQHVPSIKKNLVSASMLCRDGYKVVLESNKCVVSKHGTFVGKGYDCGGLFRLS-LH 429
Query: 412 NIINKVSNSAYMIDSVSLWHSRLAHIGISTMNRLIKSKLI-SCNIHEFEKCEICVKSKMI 470
++ NK+ NS + D LWHSR H + RL LI N+ + KC +CV+SK
Sbjct: 430 DVCNKLVNSVHFSDESDLWHSRFCHASFGCLMRLANINLIPKFNLVKKSKCHVCVESKQP 489
Query: 471 KKHFKSVE-RKFNLLDLVHSDLCEFNGMLTRGGNRYFITFIDDCSRYTHVYLLKHKDDAF 529
+K K+ E R L+LVHSDLCE NG+LT+GG RYF+TFIDD +R+ +VYLLK KD+AF
Sbjct: 490 RKPHKAAEARSLAPLELVHSDLCEMNGILTKGGKRYFLTFIDDSTRFCYVYLLKTKDEAF 549
Query: 530 NAFKSYKAEVENQLNKTIKVLRSDRGGEYFSTKFDSFCEEHDIIHE 575
N FK+YKAEVENQL + IK LRSDRGGEYFS FD FC EH IIHE
Sbjct: 550 NYFKAYKAEVENQLERKIKRLRSDRGGEYFSNVFDEFCVEHGIIHE 595
>UniRef100_Q75GS3 Putative integrase [Oryza sativa]
Length = 1456
Score = 407 bits (1046), Expect = e-112
Identities = 231/594 (38%), Positives = 339/594 (56%), Gaps = 48/594 (8%)
Query: 6 VKLDRFDGTNFTRWQDKMIFLLTALKIYYVL-----DPDLTPIAEPKDDDSDELKTERKK 60
+K FDG+N+ RW+ + + LTA++ +YV +P L+P E K + SD
Sbjct: 165 LKPHAFDGSNYKRWKARALLWLTAMQCFYVSRGKRSEPPLSPEEEAKFEASD-------- 216
Query: 61 RREDELLCRGHIMNTLSDRLYDLYTDTQSAAKIWKTLEFKFKAEEEGIKKFLISKYFDFK 120
L RG +++ L+D + D+Y S +W +LE KF + G + +++ +++D+K
Sbjct: 217 -----CLFRGALISVLADNIVDVYMHMPSGKDMWDSLEAKFGVSDAGSELYVMEQFYDYK 271
Query: 121 MLDTKPILQQVHELQVLVNKIKAVKIDIRGAFQVGAIIAKLPPSWNGYRKKLLHNYEDFS 180
M+D + +++Q HE+Q+L +++ ++ F G IIAKLPPSW+ + L H ++FS
Sbjct: 272 MVDDRSVVEQAHEIQMLAKELENNNCELPDKFVAGGIIAKLPPSWSDFATSLKHKRQEFS 331
Query: 181 LEKIQKHLRIEEESKVRDKA--ESSGFSKANTVTTKGKKKYDGKQQ---HLGPKKEHNKF 235
+ + L +EE+++ +D + G S AN V K ++ + PK N
Sbjct: 332 VPDLIGSLGVEEKARAKDVRGKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPKAATNFK 391
Query: 236 KNNNGTKGPKGGCYVCGKPDHFARDCRQNKTKKEVNAVQVDD-------EIIATVSEVMA 288
K G KG C+VCGK H+A+DC + K +K N + + +I+ TV V
Sbjct: 392 KKGKGKA--KGDCFVCGKSGHWAKDCPERKDRKSANMIISEGGGTSGYGKILPTVLSVF- 448
Query: 289 VKGKVPGWWYDTCASVHVSYDKASFKTYSESTDDQEVQMRNEVRSKVVGTGTVELNFTSG 348
P WW DT A++HV D + F +Y + M N + V G GTV+L FTSG
Sbjct: 449 ---HSPDWWVDTGANIHVCADISLFSSYQVGRGSS-LLMVNGSLAAVHGVGTVDLKFTSG 504
Query: 349 KKVTLVNVLHVPEMSRDLVSGDLLGKPGIKSVYESEKLILTRNGVFVGKGYSAEGMIK-- 406
K V L NV HVP + ++LVSG LL + G + V+ES K ++++ G FVGKGY + G+ +
Sbjct: 505 KTVQLKNVQHVPSIKKNLVSGSLLCREGFRLVFESNKCVVSKYGTFVGKGYDSGGLFRFS 564
Query: 407 ---LCPIDNIINKVSNSAYMIDSVSLWHSRLAHIGISTMNRLIKSKLI-SCNIHEFEKCE 462
+C N +N +S + D ++WHSRL H+ M RL LI + + KC
Sbjct: 565 LNDMCNNHNAVNHISEN----DESNVWHSRLCHVNFGCMTRLANMSLIPKFTLVKGSKCH 620
Query: 463 ICVKSKMIKKHFKSVE-RKFNLLDLVHSDLCEFNGMLTRGGNRYFITFIDDCSRYTHVYL 521
CV+SK +K K+ E R L+LVHSDLCE NG+LT GG +YF+T IDDC+R+ +VYL
Sbjct: 621 TCVQSKQPRKPHKASEARNLAPLELVHSDLCEMNGVLTNGGKKYFMTLIDDCTRFCYVYL 680
Query: 522 LKHKDDAFNAFKSYKAEVENQLNKTIKVLRSDRGGEYFSTKFDSFCEEHDIIHE 575
LK KD+A + FK YKAEVENQL + IK LRSDRGGEYFS +F SFCEE IIHE
Sbjct: 681 LKTKDEALHYFKIYKAEVENQLERKIKRLRSDRGGEYFSNEFASFCEEFGIIHE 734
>UniRef100_Q8S7H7 Putative polyprotein [Oryza sativa]
Length = 1394
Score = 407 bits (1046), Expect = e-112
Identities = 228/590 (38%), Positives = 340/590 (56%), Gaps = 40/590 (6%)
Query: 6 VKLDRFDGTNFTRWQDKMIFLLTALKIYYVL-----DPDLTPIAEPKDDDSDELKTERKK 60
+K FDG+N+ RW+ + + LTA++ +YV +P L+P E K + SD
Sbjct: 103 LKPHAFDGSNYKRWKARALLWLTAMQCFYVSRGKRSEPPLSPEEEAKFEASD-------- 154
Query: 61 RREDELLCRGHIMNTLSDRLYDLYTDTQSAAKIWKTLEFKFKAEEEGIKKFLISKYFDFK 120
L RG +++ L+D + D+Y S +W LE KF + G + +++ +++D+K
Sbjct: 155 -----CLFRGALISVLADNIVDVYMHMPSGKDMWDALEAKFGISDAGSELYVMEQFYDYK 209
Query: 121 MLDTKPILQQVHELQVLVNKIKAVKIDIRGAFQVGAIIAKLPPSWNGYRKKLLHNYEDFS 180
M+D + +++Q HE+Q+L +++ ++ F G IIAKLPPSW+ + L H ++FS
Sbjct: 210 MVDDRSVVEQAHEIQMLAKELENNNCELPDKFVAGDIIAKLPPSWSDFATSLKHKRQEFS 269
Query: 181 LEKIQKHLRIEEESKVRDKA--ESSGFSKANTVTTKGKKKYDGKQQ---HLGPKKEHNKF 235
+ + L +EE+++ +D + G S AN V K ++ + PK N
Sbjct: 270 VPDLIGSLGVEEKARAKDVRGKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPKAATNFK 329
Query: 236 KNNNGTKGPKGGCYVCGKPDHFARDCRQNKTKKEVNAVQVDDEIIATVSEVMAVKGKV-- 293
K + G KG C+VCGK H+A+DC + K +K N + + + +++ V
Sbjct: 330 KKSKGKA--KGDCFVCGKSGHWAKDCPERKDRKSANMIISEGGGTSGYGKILPRVLSVFH 387
Query: 294 -PGWWYDTCASVHVSYDKASFKTYSESTDDQEVQMRNEVRSKVVGTGTVELNFTSGKKVT 352
P WW DT A++HV D + F +Y + M N + V G GTV+L FTSGK V
Sbjct: 388 SPDWWVDTGANIHVCADISLFSSYQVGRGSS-LLMGNGSLAAVHGVGTVDLKFTSGKTVQ 446
Query: 353 LVNVLHVPEMSRDLVSGDLLGKPGIKSVYESEKLILTRNGVFVGKGYSAEGMIK-----L 407
L NV HVP + ++LVSG LL + G + V+ES K ++++ G FVGKGY + G+ + +
Sbjct: 447 LKNVQHVPSIKKNLVSGSLLCREGFRLVFESNKCVVSKYGTFVGKGYDSGGLFRFSLNDM 506
Query: 408 CPIDNIINKVSNSAYMIDSVSLWHSRLAHIGISTMNRLIKSKLI-SCNIHEFEKCEICVK 466
C N++N +S + D ++WHSRL H+ M RL LI + + KC CV+
Sbjct: 507 CNNHNVVNHISEN----DESNVWHSRLCHVNFGCMTRLANMSLIPKFTLVKGSKCHTCVQ 562
Query: 467 SKMIKKHFKSVE-RKFNLLDLVHSDLCEFNGMLTRGGNRYFITFIDDCSRYTHVYLLKHK 525
SK +K K+ E R L+LVHSDLCE NG+LT+GG +YF+T IDDC+R+ +VYLLK K
Sbjct: 563 SKQPRKPHKASEARNLAPLELVHSDLCEMNGVLTKGGKKYFMTLIDDCTRFCYVYLLKTK 622
Query: 526 DDAFNAFKSYKAEVENQLNKTIKVLRSDRGGEYFSTKFDSFCEEHDIIHE 575
D+A + FK YKAEVENQL + IK LRSDRGGEYFS +F SFCEE IIHE
Sbjct: 623 DEALHFFKIYKAEVENQLERKIKRLRSDRGGEYFSNEFASFCEEFGIIHE 672
>UniRef100_Q7XDW3 Putative polyprotein [Oryza sativa]
Length = 1361
Score = 406 bits (1044), Expect = e-112
Identities = 229/594 (38%), Positives = 339/594 (56%), Gaps = 48/594 (8%)
Query: 6 VKLDRFDGTNFTRWQDKMIFLLTALKIYYVL-----DPDLTPIAEPKDDDSDELKTERKK 60
+K FDG+N+ RW+ + + LTA++ +YV +P L+P + K + SD
Sbjct: 144 LKPHAFDGSNYKRWKARALLWLTAMQCFYVSRGKRSEPPLSPEEDAKFEASD-------- 195
Query: 61 RREDELLCRGHIMNTLSDRLYDLYTDTQSAAKIWKTLEFKFKAEEEGIKKFLISKYFDFK 120
L RG +++ L+D + D+Y S +W LE KF + G + +++ +++D+K
Sbjct: 196 -----CLFRGALISVLADNIVDVYMHMPSGKDMWDALEAKFGVSDAGSELYVMEQFYDYK 250
Query: 121 MLDTKPILQQVHELQVLVNKIKAVKIDIRGAFQVGAIIAKLPPSWNGYRKKLLHNYEDFS 180
M+D + +++Q HE+Q+L +++ ++ F G IIAKLPPSW+ + L H ++FS
Sbjct: 251 MVDDRSVVEQAHEIQMLAKELENNNCELPDKFVAGGIIAKLPPSWSDFATSLKHKRQEFS 310
Query: 181 LEKIQKHLRIEEESKVRD--KAESSGFSKANTVTTKGKKKYDGKQQ---HLGPKKEHNKF 235
+ + L +EE+++ +D + G S AN V K ++ + PK N
Sbjct: 311 VPDLIGSLGVEEKARAKDIRGKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPKAATNFK 370
Query: 236 KNNNGTKGPKGGCYVCGKPDHFARDCRQNKTKKEVNAVQVDD-------EIIATVSEVMA 288
K G KG C+VCGK H+A+DC + K +K N + + +I+ TV V
Sbjct: 371 KKGKGKA--KGDCFVCGKSGHWAKDCPERKDRKSANMIISEGGGTSGYGKILPTVLSVF- 427
Query: 289 VKGKVPGWWYDTCASVHVSYDKASFKTYSESTDDQEVQMRNEVRSKVVGTGTVELNFTSG 348
P WW DT ++HV D + F +Y + M N + + V G GTV+L FTSG
Sbjct: 428 ---HSPDWWVDTGTNIHVCADISLFSSYQVGRGSS-LLMGNGLLAAVHGVGTVDLKFTSG 483
Query: 349 KKVTLVNVLHVPEMSRDLVSGDLLGKPGIKSVYESEKLILTRNGVFVGKGYSAEGMIK-- 406
K V L NV HVP + ++LVSG LL + G + V+ES K ++++ G FVGKGY + G+ +
Sbjct: 484 KTVQLKNVQHVPSIKKNLVSGSLLCREGFRLVFESNKCVVSKYGTFVGKGYDSGGLFRFS 543
Query: 407 ---LCPIDNIINKVSNSAYMIDSVSLWHSRLAHIGISTMNRLIKSKLI-SCNIHEFEKCE 462
+C N +N +S + D ++WHSRL H+ M RL LI + + KC
Sbjct: 544 LNDMCNNHNAVNHISEN----DESNVWHSRLCHVNFGCMTRLANMSLIPKFTLVKGSKCH 599
Query: 463 ICVKSKMIKKHFKSVE-RKFNLLDLVHSDLCEFNGMLTRGGNRYFITFIDDCSRYTHVYL 521
CV+SK +K K+ E R L+LVHSDLCE NG+LT+GG +YF+T IDDC+R+ +VYL
Sbjct: 600 TCVQSKQPRKPHKASEARNLAPLELVHSDLCEMNGVLTKGGKKYFMTLIDDCTRFCYVYL 659
Query: 522 LKHKDDAFNAFKSYKAEVENQLNKTIKVLRSDRGGEYFSTKFDSFCEEHDIIHE 575
LK KD+A + FK YKAEVENQL + IK LRSDRGGEYFS +F SFCEE IIHE
Sbjct: 660 LKTKDEALHYFKIYKAEVENQLERKIKRLRSDRGGEYFSNEFASFCEEFGIIHE 713
>UniRef100_Q8RZ02 Putative gag-pol polyprotein [Oryza sativa]
Length = 1438
Score = 402 bits (1034), Expect = e-110
Identities = 230/594 (38%), Positives = 337/594 (56%), Gaps = 48/594 (8%)
Query: 6 VKLDRFDGTNFTRWQDKMIFLLTALKIYYVL-----DPDLTPIAEPKDDDSDELKTERKK 60
+K FDG+N+ RW+ + + LTA++ +YV +P L+P E K + SD
Sbjct: 161 LKPHAFDGSNYKRWKARALLWLTAMQCFYVSRGKRSEPPLSPEEEAKFEASD-------- 212
Query: 61 RREDELLCRGHIMNTLSDRLYDLYTDTQSAAKIWKTLEFKFKAEEEGIKKFLISKYFDFK 120
L RG +++ L+D + D+Y S +W LE KF + G + +++ +++D+K
Sbjct: 213 -----CLFRGALISVLADNIVDVYMHMPSRKDMWDALEAKFGVSDAGSELYVMEQFYDYK 267
Query: 121 MLDTKPILQQVHELQVLVNKIKAVKIDIRGAFQVGAIIAKLPPSWNGYRKKLLHNYEDFS 180
M+D + I++Q HE+Q+L +++ ++ F G IIAKLPPSW+ + L H ++FS
Sbjct: 268 MVDDRSIVEQAHEIQMLAKELENNNCELPDKFVAGGIIAKLPPSWSDFATSLKHKRQEFS 327
Query: 181 LEKIQKHLRIEEESKVRDKA--ESSGFSKANTVTTKGKKKYDGKQQ---HLGPKKEHNKF 235
+ + L +EE+++ +D + G S AN V K ++ + PK N
Sbjct: 328 VPDLIGSLGVEEKARAKDVRGKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPKAATNFK 387
Query: 236 KNNNGTKGPKGGCYVCGKPDHFARDCRQNKTKKEVNAVQVDD-------EIIATVSEVMA 288
K G KG C+VCGK H+A+DC + K +K N + + +I+ TV V
Sbjct: 388 KKGKGKA--KGDCFVCGKSGHWAKDCPERKDRKSANMIISEGGGTSGYGKILPTVLSVF- 444
Query: 289 VKGKVPGWWYDTCASVHVSYDKASFKTYSESTDDQEVQMRNEVRSKVVGTGTVELNFTSG 348
P WW DT A++HV D + F +Y + M N + V G GTV+L FTSG
Sbjct: 445 ---HSPDWWVDTGANIHVCADISLFSSYQVGRGSS-LLMGNGSLAAVHGVGTVDLKFTSG 500
Query: 349 KKVTLVNVLHVPEMSRDLVSGDLLGKPGIKSVYESEKLILTRNGVFVGKGYSAEGMIK-- 406
K V L NV HVP + ++LVSG LL + G + V+ES K ++++ FVGKGY G+ +
Sbjct: 501 KTVQLKNVQHVPSIKKNLVSGSLLCREGFRLVFESNKCVVSKYRTFVGKGYDCGGLFRFS 560
Query: 407 ---LCPIDNIINKVSNSAYMIDSVSLWHSRLAHIGISTMNRLIKSKLI-SCNIHEFEKCE 462
+C N +N +S + D ++WHSRL H+ M RL LI + + KC
Sbjct: 561 LNDMCNNHNAVNHISEN----DESNVWHSRLCHVNFGCMTRLANMSLIPKFTLVKGSKCY 616
Query: 463 ICVKSKMIKKHFKSVE-RKFNLLDLVHSDLCEFNGMLTRGGNRYFITFIDDCSRYTHVYL 521
CV+SK +K K+ E R L+LVHSDLCE NG+LT+GG +YF+T IDDC+R+ +VYL
Sbjct: 617 TCVQSKQPRKPHKASEARNLAPLELVHSDLCEMNGVLTKGGKKYFMTLIDDCTRFCYVYL 676
Query: 522 LKHKDDAFNAFKSYKAEVENQLNKTIKVLRSDRGGEYFSTKFDSFCEEHDIIHE 575
LK KD+A + FK Y+AEVENQL + IK LRSDRGGEYFS +F SFCEE IIHE
Sbjct: 677 LKTKDEALHYFKIYRAEVENQLERKIKRLRSDRGGEYFSNEFASFCEEFGIIHE 730
>UniRef100_Q9FWU0 Putative gag-pol polyprotein [Oryza sativa]
Length = 1408
Score = 400 bits (1028), Expect = e-110
Identities = 228/594 (38%), Positives = 338/594 (56%), Gaps = 48/594 (8%)
Query: 6 VKLDRFDGTNFTRWQDKMIFLLTALKIYYVL-----DPDLTPIAEPKDDDSDELKTERKK 60
+K FDG+N+ RW+ + + LTA++ +YV +P L+P E K + SD
Sbjct: 117 LKPHAFDGSNYKRWKTRALLWLTAMQCFYVSRGKRSEPPLSPEEEAKFEASD-------- 168
Query: 61 RREDELLCRGHIMNTLSDRLYDLYTDTQSAAKIWKTLEFKFKAEEEGIKKFLISKYFDFK 120
L RG +++ L+D + D+Y S + LE KF + G + +++ +++D+K
Sbjct: 169 -----CLFRGALISVLADNIVDVYMHMPSGKDMRDALEAKFGVSDAGSELYVMEQFYDYK 223
Query: 121 MLDTKPILQQVHELQVLVNKIKAVKIDIRGAFQVGAIIAKLPPSWNGYRKKLLHNYEDFS 180
M+D + +++Q HE+Q+L +++ ++ F G IIAKLPPSW+ + L H ++FS
Sbjct: 224 MVDDRSVVEQAHEIQMLAKELENNNCELPDKFVAGGIIAKLPPSWSDFATSLKHKRQEFS 283
Query: 181 LEKIQKHLRIEEESKVRDKA--ESSGFSKANTVTTKGKKKYDGKQQ---HLGPKKEHNKF 235
+ + L +EE+++ +D + G S AN V K ++ + PK N
Sbjct: 284 VPDLIGSLGVEEKARAKDVRGKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPKAATNFK 343
Query: 236 KNNNGTKGPKGGCYVCGKPDHFARDCRQNKTKKEVNAVQVDD-------EIIATVSEVMA 288
K + G KG C+VCGK H+A+DC + K +K N + + +I+ TV V
Sbjct: 344 KKSKGKA--KGDCFVCGKSGHWAKDCPERKDRKSANMIISEGGGTSGYGKILPTVLSVF- 400
Query: 289 VKGKVPGWWYDTCASVHVSYDKASFKTYSESTDDQEVQMRNEVRSKVVGTGTVELNFTSG 348
P WW DT A++HV D + F +Y + M N + V G GTV+L FTSG
Sbjct: 401 ---HSPDWWVDTGANIHVCADISLFSSYQVGRGSS-LLMGNGSLAAVHGVGTVDLKFTSG 456
Query: 349 KKVTLVNVLHVPEMSRDLVSGDLLGKPGIKSVYESEKLILTRNGVFVGKGYSAEGMIK-- 406
K V L NV HVP + ++LVSG LL + + V+ES K ++++ G FVGKGY + G+ +
Sbjct: 457 KTVQLKNVQHVPSIKKNLVSGSLLCREDFRLVFESNKCVVSKYGTFVGKGYDSGGLFRFS 516
Query: 407 ---LCPIDNIINKVSNSAYMIDSVSLWHSRLAHIGISTMNRLIKSKLI-SCNIHEFEKCE 462
+C N +N +S + D ++WHSRL H+ M RL LI + + KC
Sbjct: 517 LNDMCNNHNAVNHISEN----DESNVWHSRLCHVNFGCMTRLANMSLIPKFTLVKGSKCH 572
Query: 463 ICVKSKMIKKHFKSVE-RKFNLLDLVHSDLCEFNGMLTRGGNRYFITFIDDCSRYTHVYL 521
CV+SK +K K+ E R L+L+HSDLCE NG+LT+GG +YF+T IDDC+R+ +VYL
Sbjct: 573 TCVQSKQPRKPHKASEARNLAPLELIHSDLCEMNGVLTKGGKKYFMTLIDDCTRFCYVYL 632
Query: 522 LKHKDDAFNAFKSYKAEVENQLNKTIKVLRSDRGGEYFSTKFDSFCEEHDIIHE 575
LK KD+A + FK YKAEVENQL + IK LRSDRGGEYFS +F SFCEE IIHE
Sbjct: 633 LKTKDEALHFFKIYKAEVENQLERKIKRLRSDRGGEYFSNEFASFCEEFGIIHE 686
>UniRef100_Q7XLA2 OSJNBb0115I09.10 protein [Oryza sativa]
Length = 1321
Score = 400 bits (1027), Expect = e-110
Identities = 229/594 (38%), Positives = 337/594 (56%), Gaps = 60/594 (10%)
Query: 6 VKLDRFDGTNFTRWQDKMIFLLTALKIYYVL-----DPDLTPIAEPKDDDSDELKTERKK 60
+K FDG+N+ RW+ + + LTA++ +YV +P L+P E K + SD
Sbjct: 42 LKPHAFDGSNYKRWKARALLWLTAMQCFYVSRGKRSEPPLSPEEEAKFEASD-------- 93
Query: 61 RREDELLCRGHIMNTLSDRLYDLYTDTQSAAKIWKTLEFKFKAEEEGIKKFLISKYFDFK 120
L RG +++ L+D + D+Y S ++W LE KF + G + +++ +++D+K
Sbjct: 94 -----CLFRGALISVLADNIVDVYMYMPSGKEMWDALEAKFGVSDAGSELYVMEQFYDYK 148
Query: 121 MLDTKPILQQVHELQVLVNKIKAVKIDIRGAFQVGAIIAKLPPSWNGYRKKLLHNYEDFS 180
M+D + I++Q HE+Q+L +++ ++ F G IIAKLPPSW+ + L H ++FS
Sbjct: 149 MVDDRSIVEQAHEIQMLAKELENNNCELPDKFVAGGIIAKLPPSWSDFATSLKHKRQEFS 208
Query: 181 LEKIQKHLRIEEESKVRDKA--ESSGFSKANTVTTKGKKKYDGKQQ---HLGPKKEHNKF 235
+ + L +EE+++ +D + G S AN V K ++ + PK N
Sbjct: 209 VPDLIGSLGVEEKARAKDVRGKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPKAATNFK 268
Query: 236 KNNNGTKGPKGGCYVCGKPDHFARDCRQNKTKKEVNAVQVDD-------EIIATVSEVMA 288
K + G KG C+VCGK H+A+DC + K +K N + + +I+ TV V
Sbjct: 269 KKSKGKA--KGDCFVCGKSGHWAKDCPERKDRKSANMIISEGGGTSGYGKILPTVLSVF- 325
Query: 289 VKGKVPGWWYDTCASVHVSYDKASFKTYSESTDDQEVQMRNEVRSKVVGTGTVELNFTSG 348
P WW DT A++HV + + M N + V G GTV+L FTSG
Sbjct: 326 ---HSPDWWVDTGANIHVGRGSS-------------LLMGNGSLAAVHGVGTVDLKFTSG 369
Query: 349 KKVTLVNVLHVPEMSRDLVSGDLLGKPGIKSVYESEKLILTRNGVFVGKGYSAEGMIK-- 406
K V L NV HVP + ++LVSG LL + G + V+ES K ++++ G FVGKGY + G+ +
Sbjct: 370 KTVQLKNVQHVPSIKKNLVSGSLLCREGFRLVFESNKCVVSKYGTFVGKGYDSGGLFRFS 429
Query: 407 ---LCPIDNIINKVSNSAYMIDSVSLWHSRLAHIGISTMNRLIKSKLI-SCNIHEFEKCE 462
+C N +N +S + D ++WHSRL H+ M RL LI + + KC
Sbjct: 430 LNDMCNNHNAVNHISEN----DESNVWHSRLCHVNFGCMTRLANMSLIPKFTLVKGSKCH 485
Query: 463 ICVKSKMIKKHFKSVE-RKFNLLDLVHSDLCEFNGMLTRGGNRYFITFIDDCSRYTHVYL 521
CV+SK +K K+ E R L+LVHSDLCE NG+LT+GG +YF+T IDDC+R+ +VYL
Sbjct: 486 TCVQSKQPRKPHKASEVRNLAPLELVHSDLCEMNGVLTKGGKKYFMTLIDDCTRFCYVYL 545
Query: 522 LKHKDDAFNAFKSYKAEVENQLNKTIKVLRSDRGGEYFSTKFDSFCEEHDIIHE 575
LK KD+A + FK YKAEVENQL + IK LRSDRGGEYFS +F SFCEE IIHE
Sbjct: 546 LKTKDEALHFFKIYKAEVENQLERKIKRLRSDRGGEYFSNEFASFCEEFGIIHE 599
>UniRef100_Q6L485 Putative polyprotein [Oryza sativa]
Length = 1297
Score = 397 bits (1021), Expect = e-109
Identities = 234/593 (39%), Positives = 336/593 (56%), Gaps = 38/593 (6%)
Query: 4 DLVKLDRFDGTNFTRWQDKMIFLLTALKIYYVLD--PDLTPIAEPKDDDSDELKTERKKR 61
D ++ D+F G +F RWQ ++ LTA+K ++V P+ AE ++K+
Sbjct: 6 DALRPDKFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAE-----------QQKQF 54
Query: 62 REDELLCRGHIMNTLSDRLYDLYTDTQSAAKIWKTLEFKFKAEEEGIKKFLISKYFDFKM 121
E L G I++ L DRL ++Y A ++W L KF A + +++ ++ D+KM
Sbjct: 55 EEATTLFVGCILSVLGDRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIMEQFHDYKM 114
Query: 122 LDTKPILQQVHELQVLVNKIKAVKIDIRGAFQVGAIIAKLPPSWNGYRKKLLHNYEDFSL 181
D + +++Q HE+Q + +++ +K + F G IIAKLPPSW + L H +++S+
Sbjct: 115 ADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEYSV 174
Query: 182 EKIQKHLRIEEESKVRDKAESS--GFSKANTV---TTKGKKKYDGKQQHLGPKKEHNKFK 236
E + L +EE+++ +D A G S AN V K K+KY +Q K++ K
Sbjct: 175 EGLIASLDVEEKAREKDAASKGDGGQSSANVVHKAQNKSKEKYKAQQTTNFKKQK----K 230
Query: 237 NNNGTKGPKGGCYVCGKPDHFARDCRQNK--------TKKEVNAV---QVDDEIIATVSE 285
NNN + C+VCG+ H AR C Q+K T K N D +
Sbjct: 231 NNNNPNQDERTCFVCGQVGHLARKCPQHKGMKAPAGQTSKSANVTIGNTGDGSGYGNLPT 290
Query: 286 VMAVKGKVPGWWYDTCASVHVSYDKASFKTYSESTDDQEVQMRNEVRSKVVGTGTVELNF 345
V +V WW DT A+VHV D + F +Y + V M N + V G GTV+L F
Sbjct: 291 VFSVNQST-NWWVDTGANVHVCADISLFSSYQVARGST-VLMGNGSHASVHGVGTVDLKF 348
Query: 346 TSGKKVTLVNVLHVPEMSRDLVSGDLLGKPGIKSVYESEKLILTRNGVFVGKGYSAEGMI 405
TSGK V L NV HVP + R+LVSG L + G K V+ES K++++++G F+GKGY G+
Sbjct: 349 TSGKIVQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGKGYECGGLF 408
Query: 406 KLCPIDNIINKVSNSAYMIDS-VSLWHSRLAHIGISTMNRLIKSKLIS-CNIHEFEKCEI 463
+ D V++ +D ++WHSRL HI M+RL LIS +I + KC
Sbjct: 409 RFSLSDFCNKSVNHICGSVDDEANVWHSRLCHINFGLMSRLSSMCLISKFSIVKGSKCHS 468
Query: 464 CVKSKMIKKHFKSVE-RKFNLLDLVHSDLCEFNGMLTRGGNRYFITFIDDCSRYTHVYLL 522
CV+SK +K K+ E R L+L+HSDLCE NG+LT+GG RYF+T IDD +R+ +VYLL
Sbjct: 469 CVQSKQPRKPHKAAEERNLAPLELLHSDLCEMNGVLTKGGKRYFMTLIDDVTRFCYVYLL 528
Query: 523 KHKDDAFNAFKSYKAEVENQLNKTIKVLRSDRGGEYFSTKFDSFCEEHDIIHE 575
K KD+A + FK YKAEVENQL++ IK LRSDRGGE+FS +FD FCEEH IIHE
Sbjct: 529 KTKDEALDYFKIYKAEVENQLDRKIKRLRSDRGGEFFSNEFDLFCEEHGIIHE 581
>UniRef100_Q7XM54 OSJNBb0018J12.5 protein [Oryza sativa]
Length = 1320
Score = 397 bits (1019), Expect = e-109
Identities = 234/593 (39%), Positives = 334/593 (55%), Gaps = 38/593 (6%)
Query: 4 DLVKLDRFDGTNFTRWQDKMIFLLTALKIYYVLD--PDLTPIAEPKDDDSDELKTERKKR 61
D ++ D+F G +F RWQ ++ LTA+K ++V P+ AE ++K+
Sbjct: 6 DALRPDKFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAE-----------QQKQF 54
Query: 62 REDELLCRGHIMNTLSDRLYDLYTDTQSAAKIWKTLEFKFKAEEEGIKKFLISKYFDFKM 121
E L G I++ L DRL ++Y A ++W L KF A + +++ ++ D+KM
Sbjct: 55 EEATTLFVGCILSVLGDRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIMEQFHDYKM 114
Query: 122 LDTKPILQQVHELQVLVNKIKAVKIDIRGAFQVGAIIAKLPPSWNGYRKKLLHNYEDFSL 181
D + +++Q HE+Q + +++ +K + F G IIAKLPPSW + L H +++S+
Sbjct: 115 ADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEYSV 174
Query: 182 EKIQKHLRIEEESKVRDKAESS--GFSKANTV---TTKGKKKYDGKQQHLGPKKEHNKFK 236
E + L +EE+++ +D A G S AN V K K KY +Q K++ K
Sbjct: 175 EGLIASLDVEEKAREKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQK----K 230
Query: 237 NNNGTKGPKGGCYVCGKPDHFARDCRQNK--------TKKEVNAV---QVDDEIIATVSE 285
NNN + C+VCG+ H AR C Q K T K N D +
Sbjct: 231 NNNNPNQDERTCFVCGQIGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGNLPT 290
Query: 286 VMAVKGKVPGWWYDTCASVHVSYDKASFKTYSESTDDQEVQMRNEVRSKVVGTGTVELNF 345
V +V WW DT A+VHV D + F +Y + V M N + V G GTV+L F
Sbjct: 291 VFSVNQST-NWWVDTGANVHVCADISLFSSYQVARGST-VLMGNGSHASVHGVGTVDLKF 348
Query: 346 TSGKKVTLVNVLHVPEMSRDLVSGDLLGKPGIKSVYESEKLILTRNGVFVGKGYSAEGMI 405
TSGK V L NV HVP + R+LVSG L + G K V+ES K++++++G F+GKGY G+
Sbjct: 349 TSGKIVQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGKGYECGGLF 408
Query: 406 KLCPIDNIINKVSNSAYMIDS-VSLWHSRLAHIGISTMNRLIKSKLI-SCNIHEFEKCEI 463
+ D V++ +D ++WHSRL HI M+RL LI +I + KC
Sbjct: 409 RFSLSDFCNKSVNHICGSVDDEANVWHSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHS 468
Query: 464 CVKSKMIKKHFKSVE-RKFNLLDLVHSDLCEFNGMLTRGGNRYFITFIDDCSRYTHVYLL 522
CV+SK +K K+ E R L+L+HSDLCE NG+LT+GG RYF+TFIDD +R+ +VYLL
Sbjct: 469 CVQSKQPRKPHKAAEERNLAPLELLHSDLCEMNGVLTKGGKRYFMTFIDDATRFCYVYLL 528
Query: 523 KHKDDAFNAFKSYKAEVENQLNKTIKVLRSDRGGEYFSTKFDSFCEEHDIIHE 575
K KD+A + FK YKAEVENQL++ IK LRSDRGGE+FS +FD FCEEH IIHE
Sbjct: 529 KTKDEALDYFKIYKAEVENQLDRKIKRLRSDRGGEFFSNEFDLFCEEHGIIHE 581
>UniRef100_Q84RZ7 Hypothetical polyprotein [Oryza sativa]
Length = 1268
Score = 396 bits (1017), Expect = e-108
Identities = 220/534 (41%), Positives = 313/534 (58%), Gaps = 22/534 (4%)
Query: 57 ERKKRREDELLCRGHIMNTLSDRLYDLYTDTQSAAKIWKTLEFKFKAEEEGIKKFLISKY 116
E K + L RG +++ L+D + D+Y S +W LE KF + G + +++ ++
Sbjct: 20 EEAKFEATDCLFRGALISVLADNIVDVYMHIPSGKDMWDALEAKFGVSDAGSELYVMEQF 79
Query: 117 FDFKMLDTKPILQQVHELQVLVNKIKAVKIDIRGAFQVGAIIAKLPPSWNGYRKKLLHNY 176
+D+KM+D + +++Q HE+Q+LV +++ ++ F G IIAKLPPSW+ + L H
Sbjct: 80 YDYKMVDDRSVVEQAHEIQMLVKELENNHCELPDKFVAGGIIAKLPPSWSDFATSLKHKR 139
Query: 177 EDFSLEKIQKHLRIEEESKVRDKA--ESSGFSKANTVTTKGKKKYDGKQQHLGPK---KE 231
++FS+ + L IEE+++ +D + G S AN V K + + P K
Sbjct: 140 QEFSVTDLIGSLGIEEKARAKDNRGKKIEGGSSANLVQKKNPHASHNNNKKVKPDVKPKA 199
Query: 232 HNKFKNNNGTKGPKGGCYVCGKPDHFARDCRQNKTKKEVNAVQVDD-------EIIATVS 284
FK K KG C+VCGKP H+A+DC + K KK N V +D + + TV
Sbjct: 200 TTNFKKKGKGKA-KGDCFVCGKPGHWAKDCPERKDKKSANMVISEDGGTLGYGKFLPTVL 258
Query: 285 EVMAVKGKVPGWWYDTCASVHVSYDKASFKTYSESTDDQEVQMRNEVRSKVVGTGTVELN 344
V P WW DT A++HV D + F +Y + M N + V G GTV+L
Sbjct: 259 SVC----HSPDWWVDTGANIHVCADISLFSSYQVGRGSS-LLMGNGSLAAVHGVGTVDLK 313
Query: 345 FTSGKKVTLVNVLHVPEMSRDLVSGDLLGKPGIKSVYESEKLILTRNGVFVGKGYSAEGM 404
FTSGK V L NV HVP + ++LVSG LL + G + V+ES K ++++ G F+GKGY + G+
Sbjct: 314 FTSGKIVQLKNVQHVPSIKKNLVSGSLLCRDGFRLVFESNKCVVSKYGTFIGKGYDSGGL 373
Query: 405 IKLCPIDNIINKVSNSAYMIDSVS-LWHSRLAHIGISTMNRLIKSKLI-SCNIHEFEKCE 462
+ +D++ NKV N D S +WHSRL H+ M RL LI + + KC
Sbjct: 374 FRFS-LDDMCNKVVNHVSDDDDESNVWHSRLCHVNFGCMTRLANMSLIPKFTLVKGSKCH 432
Query: 463 ICVKSKMIKKHFKSVE-RKFNLLDLVHSDLCEFNGMLTRGGNRYFITFIDDCSRYTHVYL 521
CV+SK +K K+ E R L+LVHSDLCE NG+LT+GG +YF+T IDDC+R+ +VYL
Sbjct: 433 TCVQSKQPRKPHKASEARNLAPLELVHSDLCEMNGVLTKGGKKYFMTLIDDCTRFCYVYL 492
Query: 522 LKHKDDAFNAFKSYKAEVENQLNKTIKVLRSDRGGEYFSTKFDSFCEEHDIIHE 575
LK KD+A + FK YKAEVENQL + IK LRSDRGGEYFS +F SFCEE+ IIHE
Sbjct: 493 LKTKDEALHYFKIYKAEVENQLERKIKRLRSDRGGEYFSNEFTSFCEEYGIIHE 546
>UniRef100_Q6F2U1 Putative polyprotein [Oryza sativa]
Length = 1401
Score = 396 bits (1017), Expect = e-108
Identities = 227/594 (38%), Positives = 334/594 (56%), Gaps = 60/594 (10%)
Query: 6 VKLDRFDGTNFTRWQDKMIFLLTALKIYYVL-----DPDLTPIAEPKDDDSDELKTERKK 60
+K FDG+N+ RW+ + + LTA++ +YV +P L+P E K + SD
Sbjct: 159 LKPHAFDGSNYKRWKARALLWLTAMQCFYVSRGKRSEPPLSPEEEAKFEASD-------- 210
Query: 61 RREDELLCRGHIMNTLSDRLYDLYTDTQSAAKIWKTLEFKFKAEEEGIKKFLISKYFDFK 120
L G +++ L+D + D+Y S +W LE KF + G + +++ +++D+K
Sbjct: 211 -----CLFHGALISVLADNIVDVYMHMPSGKDMWDALEAKFGVSDAGSELYVMEQFYDYK 265
Query: 121 MLDTKPILQQVHELQVLVNKIKAVKIDIRGAFQVGAIIAKLPPSWNGYRKKLLHNYEDFS 180
M+D + +++Q HE+Q+L +++ ++ F G IIAKLPPSW+ + L H ++FS
Sbjct: 266 MVDDRSVVEQAHEIQMLAKELENNNCELPDKFVAGGIIAKLPPSWSDFATSLKHKRQEFS 325
Query: 181 LEKIQKHLRIEEESKVRDKA--ESSGFSKANTVTTKGKKKYDGKQQ---HLGPKKEHNKF 235
+ + L +EE+++ +D + G S AN V K ++ + PK N
Sbjct: 326 VPDLIGSLGVEEKARAKDVRGKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPKAATNFK 385
Query: 236 KNNNGTKGPKGGCYVCGKPDHFARDCRQNKTKKEVNAVQVDD-------EIIATVSEVMA 288
K G KG C+VCGK H+A+DC + K +K N + + +I+ TV V
Sbjct: 386 KKGKGKT--KGDCFVCGKSGHWAKDCPECKDRKSANMIISEGGGTSGYGKILPTVLSVF- 442
Query: 289 VKGKVPGWWYDTCASVHVSYDKASFKTYSESTDDQEVQMRNEVRSKVVGTGTVELNFTSG 348
P WW DT A++HV + + M N + V G GTV+L FTSG
Sbjct: 443 ---HSPDWWVDTGANIHVGRGSS-------------LLMGNGSLAAVHGVGTVDLKFTSG 486
Query: 349 KKVTLVNVLHVPEMSRDLVSGDLLGKPGIKSVYESEKLILTRNGVFVGKGYSAEGMIK-- 406
K V L NV HVP + ++LVSG LL + G + V+ES K ++++ G FVGKGY + G+ +
Sbjct: 487 KTVQLKNVQHVPSIKKNLVSGSLLCREGFRLVFESNKCVVSKYGTFVGKGYDSGGLFRFS 546
Query: 407 ---LCPIDNIINKVSNSAYMIDSVSLWHSRLAHIGISTMNRLIKSKLI-SCNIHEFEKCE 462
+C N +N +S + D ++WHSRL H+ M RL LI + + KC
Sbjct: 547 LNDMCNNHNAVNHISEN----DESNVWHSRLCHVNFGCMTRLANMSLIPKFTLVKGSKCH 602
Query: 463 ICVKSKMIKKHFKSVE-RKFNLLDLVHSDLCEFNGMLTRGGNRYFITFIDDCSRYTHVYL 521
CV+SK +K K+ E R L+LVHSDLCE NG+LT+GG +YF+T IDDC+R+ +VYL
Sbjct: 603 TCVQSKQPRKPHKASEARNLAPLELVHSDLCEMNGVLTKGGKKYFMTLIDDCTRFCYVYL 662
Query: 522 LKHKDDAFNAFKSYKAEVENQLNKTIKVLRSDRGGEYFSTKFDSFCEEHDIIHE 575
LK KD+A + FK YKAEVENQL + IK LRSDRGGEYFS +F SFCEE IIHE
Sbjct: 663 LKTKDEALHYFKIYKAEVENQLERKIKRLRSDRGGEYFSNEFASFCEEFGIIHE 716
>UniRef100_Q8LJ12 Putative gag and pol [Oryza sativa]
Length = 1302
Score = 395 bits (1015), Expect = e-108
Identities = 233/593 (39%), Positives = 333/593 (55%), Gaps = 38/593 (6%)
Query: 4 DLVKLDRFDGTNFTRWQDKMIFLLTALKIYYVLD--PDLTPIAEPKDDDSDELKTERKKR 61
D ++ D+F G +F RWQ ++ LTA+K ++V P+ AE ++K+
Sbjct: 6 DALRPDKFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAE-----------QQKQF 54
Query: 62 REDELLCRGHIMNTLSDRLYDLYTDTQSAAKIWKTLEFKFKAEEEGIKKFLISKYFDFKM 121
E L G I++ L DRL ++Y A ++W L KF A + +++ ++ D+KM
Sbjct: 55 EEATTLFVGCILSVLGDRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIMEQFHDYKM 114
Query: 122 LDTKPILQQVHELQVLVNKIKAVKIDIRGAFQVGAIIAKLPPSWNGYRKKLLHNYEDFSL 181
D + +++Q HE+Q + +++ +K + F G IIAKLPPSW + L H +++S+
Sbjct: 115 ADNRSVVEQAHEIQTMAKELELLKCVLPNKFVAGCIIAKLPPSWRSFGTALKHKRQEYSV 174
Query: 182 EKIQKHLRIEEESKVRDKAESS--GFSKANTV---TTKGKKKYDGKQQHLGPKKEHNKFK 236
E + L +EE+++ +D A G S AN V K K KY +Q K++ K
Sbjct: 175 EGLIASLDVEEKAREKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQK----K 230
Query: 237 NNNGTKGPKGGCYVCGKPDHFARDCRQNK--------TKKEVNAV---QVDDEIIATVSE 285
NNN + C+VCG+ H AR C Q K T K N D +
Sbjct: 231 NNNNPNQDERTCFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGNLPT 290
Query: 286 VMAVKGKVPGWWYDTCASVHVSYDKASFKTYSESTDDQEVQMRNEVRSKVVGTGTVELNF 345
V +V WW DT A+VHV D + F +Y + V M N + V G GTV+L F
Sbjct: 291 VFSVNQST-NWWVDTGANVHVCADISLFSSYQVARGST-VLMGNGSHASVHGVGTVDLKF 348
Query: 346 TSGKKVTLVNVLHVPEMSRDLVSGDLLGKPGIKSVYESEKLILTRNGVFVGKGYSAEGMI 405
TSGK V L NV HVP + R+LVSG L + G K V+ES K++++++G F+GKGY G+
Sbjct: 349 TSGKIVQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGKGYECGGLF 408
Query: 406 KLCPIDNIINKVSNSAYMIDS-VSLWHSRLAHIGISTMNRLIKSKLI-SCNIHEFEKCEI 463
+ D V++ +D ++WHSRL HI M+RL LI +I + KC
Sbjct: 409 RFSLSDFCNKSVNHICGSVDDEANVWHSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHS 468
Query: 464 CVKSKMIKKHFKSVE-RKFNLLDLVHSDLCEFNGMLTRGGNRYFITFIDDCSRYTHVYLL 522
CV+SK +K K+ E R L+L+HSDLCE NG+LT+GG RYF+T IDD +R+ +VYLL
Sbjct: 469 CVQSKQPRKPHKAAEERNLAPLELLHSDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLL 528
Query: 523 KHKDDAFNAFKSYKAEVENQLNKTIKVLRSDRGGEYFSTKFDSFCEEHDIIHE 575
K KD+A + FK YKAEVENQL++ IK LRSDRGGE+FS +FD FCEEH IIHE
Sbjct: 529 KTKDEALDYFKIYKAEVENQLDRKIKRLRSDRGGEFFSNEFDLFCEEHGIIHE 581
>UniRef100_Q6F2M4 Putative polyprotein [Oryza sativa]
Length = 1320
Score = 395 bits (1014), Expect = e-108
Identities = 233/593 (39%), Positives = 333/593 (55%), Gaps = 38/593 (6%)
Query: 4 DLVKLDRFDGTNFTRWQDKMIFLLTALKIYYVLD--PDLTPIAEPKDDDSDELKTERKKR 61
D ++ D+F G +F RWQ ++ LTA+K ++V P+ AE ++K+
Sbjct: 6 DALRPDKFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAE-----------QQKQF 54
Query: 62 REDELLCRGHIMNTLSDRLYDLYTDTQSAAKIWKTLEFKFKAEEEGIKKFLISKYFDFKM 121
E L G I++ L DRL ++Y A ++W L KF A + +++ ++ D+KM
Sbjct: 55 EEATTLFVGCILSVLGDRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIMEQFHDYKM 114
Query: 122 LDTKPILQQVHELQVLVNKIKAVKIDIRGAFQVGAIIAKLPPSWNGYRKKLLHNYEDFSL 181
D + +++Q HE+Q + +++ +K + F G IIAKLPPSW + L H +++S+
Sbjct: 115 ADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEYSV 174
Query: 182 EKIQKHLRIEEESKVRDKAESS--GFSKANTV---TTKGKKKYDGKQQHLGPKKEHNKFK 236
E + L +EE+++ +D A G S AN V K K KY +Q K++ K
Sbjct: 175 EGLIASLDVEEKAREKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQK----K 230
Query: 237 NNNGTKGPKGGCYVCGKPDHFARDCRQNK--------TKKEVNAV---QVDDEIIATVSE 285
NNN + C+VCG+ H AR C Q K T K N D +
Sbjct: 231 NNNNPNQDERTCFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGNLPT 290
Query: 286 VMAVKGKVPGWWYDTCASVHVSYDKASFKTYSESTDDQEVQMRNEVRSKVVGTGTVELNF 345
V +V WW DT A+VHV D + F +Y + V M N + V G GTV+L F
Sbjct: 291 VFSVNQST-NWWVDTGANVHVCADISLFSSYQVARGST-VLMGNGSHASVHGVGTVDLKF 348
Query: 346 TSGKKVTLVNVLHVPEMSRDLVSGDLLGKPGIKSVYESEKLILTRNGVFVGKGYSAEGMI 405
TSGK V L NV HVP + R+LVSG L + G K V+ES K++++++G F+GKGY G+
Sbjct: 349 TSGKIVQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGKGYECGGLF 408
Query: 406 KLCPIDNIINKVSNSAYMIDS-VSLWHSRLAHIGISTMNRLIKSKLI-SCNIHEFEKCEI 463
+ D V++ +D ++WHSRL HI M+RL LI +I + KC
Sbjct: 409 RFSLSDFCNKSVNHICGSVDDEANVWHSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHS 468
Query: 464 CVKSKMIKKHFKSVE-RKFNLLDLVHSDLCEFNGMLTRGGNRYFITFIDDCSRYTHVYLL 522
CV+SK +K K+ E R L+L+HSDLCE NG+LT+GG RYF+T IDD +R+ +VYLL
Sbjct: 469 CVQSKQPRKPHKAAEERNLAPLELLHSDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLL 528
Query: 523 KHKDDAFNAFKSYKAEVENQLNKTIKVLRSDRGGEYFSTKFDSFCEEHDIIHE 575
K KD+A + FK YKAEVENQL++ IK LRSDRGGE+FS +FD FCEEH IIHE
Sbjct: 529 KTKDEALDYFKIYKAEVENQLDRKIKRLRSDRGGEFFSNEFDLFCEEHGIIHE 581
>UniRef100_Q6AT91 Putative polyprotein [Oryza sativa]
Length = 1320
Score = 395 bits (1014), Expect = e-108
Identities = 233/593 (39%), Positives = 333/593 (55%), Gaps = 38/593 (6%)
Query: 4 DLVKLDRFDGTNFTRWQDKMIFLLTALKIYYVLD--PDLTPIAEPKDDDSDELKTERKKR 61
D ++ D+F G +F RWQ ++ LTA+K ++V P+ AE ++K+
Sbjct: 6 DALRPDKFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAE-----------QQKQF 54
Query: 62 REDELLCRGHIMNTLSDRLYDLYTDTQSAAKIWKTLEFKFKAEEEGIKKFLISKYFDFKM 121
E L G I++ L DRL ++Y A ++W L KF A + +++ ++ D+KM
Sbjct: 55 EEATTLFVGCILSVLGDRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIMEQFHDYKM 114
Query: 122 LDTKPILQQVHELQVLVNKIKAVKIDIRGAFQVGAIIAKLPPSWNGYRKKLLHNYEDFSL 181
D + +++Q HE+Q + +++ +K + F G IIAKLPPSW + L H +++S+
Sbjct: 115 ADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEYSV 174
Query: 182 EKIQKHLRIEEESKVRDKAESS--GFSKANTV---TTKGKKKYDGKQQHLGPKKEHNKFK 236
E + L +EE+++ +D A G S AN V K K KY +Q K++ K
Sbjct: 175 EGLIASLDVEEKAREKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQK----K 230
Query: 237 NNNGTKGPKGGCYVCGKPDHFARDCRQNK--------TKKEVNAV---QVDDEIIATVSE 285
NNN + C+VCG+ H AR C Q K T K N D +
Sbjct: 231 NNNNPNQDERTCFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGNLPT 290
Query: 286 VMAVKGKVPGWWYDTCASVHVSYDKASFKTYSESTDDQEVQMRNEVRSKVVGTGTVELNF 345
V +V WW DT A+VHV D + F +Y + V M N + V G GTV+L F
Sbjct: 291 VFSVNQST-NWWVDTGANVHVCADISLFSSYQVARGST-VLMGNGSHASVHGVGTVDLKF 348
Query: 346 TSGKKVTLVNVLHVPEMSRDLVSGDLLGKPGIKSVYESEKLILTRNGVFVGKGYSAEGMI 405
TSGK V L NV HVP + R+LVSG L + G K V+ES K++++++G F+GKGY G+
Sbjct: 349 TSGKIVQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGKGYECGGLF 408
Query: 406 KLCPIDNIINKVSNSAYMIDS-VSLWHSRLAHIGISTMNRLIKSKLI-SCNIHEFEKCEI 463
+ D V++ +D ++WHSRL HI M+RL LI +I + KC
Sbjct: 409 RFSLSDFCNKSVNHICGSVDDEANVWHSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHS 468
Query: 464 CVKSKMIKKHFKSVE-RKFNLLDLVHSDLCEFNGMLTRGGNRYFITFIDDCSRYTHVYLL 522
CV+SK +K K+ E R L+L+HSDLCE NG+LT+GG RYF+T IDD +R+ +VYLL
Sbjct: 469 CVQSKQPRKPHKAAEERNLAPLELLHSDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLL 528
Query: 523 KHKDDAFNAFKSYKAEVENQLNKTIKVLRSDRGGEYFSTKFDSFCEEHDIIHE 575
K KD+A + FK YKAEVENQL++ IK LRSDRGGE+FS +FD FCEEH IIHE
Sbjct: 529 KTKDEALDYFKIYKAEVENQLDRKIKRLRSDRGGEFFSNEFDLFCEEHGIIHE 581
>UniRef100_Q8RYS5 Putative polyprotein [Oryza sativa]
Length = 1320
Score = 395 bits (1014), Expect = e-108
Identities = 233/593 (39%), Positives = 333/593 (55%), Gaps = 38/593 (6%)
Query: 4 DLVKLDRFDGTNFTRWQDKMIFLLTALKIYYVLD--PDLTPIAEPKDDDSDELKTERKKR 61
D ++ D+F G +F RWQ ++ LTA+K ++V P+ AE ++K+
Sbjct: 6 DALRPDKFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAE-----------QQKQF 54
Query: 62 REDELLCRGHIMNTLSDRLYDLYTDTQSAAKIWKTLEFKFKAEEEGIKKFLISKYFDFKM 121
E L G I++ L DRL ++Y A ++W L KF A + +++ ++ D+KM
Sbjct: 55 EEATTLFVGCILSVLGDRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIMEQFHDYKM 114
Query: 122 LDTKPILQQVHELQVLVNKIKAVKIDIRGAFQVGAIIAKLPPSWNGYRKKLLHNYEDFSL 181
D + +++Q HE+Q + +++ +K + F G IIAKLPPSW + L H +++S+
Sbjct: 115 ADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEYSV 174
Query: 182 EKIQKHLRIEEESKVRDKAESS--GFSKANTV---TTKGKKKYDGKQQHLGPKKEHNKFK 236
E + L +EE+++ +D A G S AN V K K KY +Q K++ K
Sbjct: 175 EGLIASLDVEEKAREKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQK----K 230
Query: 237 NNNGTKGPKGGCYVCGKPDHFARDCRQNK--------TKKEVNAV---QVDDEIIATVSE 285
NNN + C+VCG+ H AR C Q K T K N D +
Sbjct: 231 NNNNPNQDERTCFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGNLPT 290
Query: 286 VMAVKGKVPGWWYDTCASVHVSYDKASFKTYSESTDDQEVQMRNEVRSKVVGTGTVELNF 345
V +V WW DT A+VHV D + F +Y + V M N + V G GTV+L F
Sbjct: 291 VFSVNQST-NWWVDTGANVHVCADISLFSSYQVARGST-VLMGNGSHASVHGVGTVDLKF 348
Query: 346 TSGKKVTLVNVLHVPEMSRDLVSGDLLGKPGIKSVYESEKLILTRNGVFVGKGYSAEGMI 405
TSGK V L NV HVP + R+LVSG L + G K V+ES K++++++G F+GKGY G+
Sbjct: 349 TSGKIVQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGKGYECGGLF 408
Query: 406 KLCPIDNIINKVSNSAYMIDS-VSLWHSRLAHIGISTMNRLIKSKLI-SCNIHEFEKCEI 463
+ D V++ +D ++WHSRL HI M+RL LI +I + KC
Sbjct: 409 RFSLSDFCNKSVNHICGSVDDEANVWHSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHS 468
Query: 464 CVKSKMIKKHFKSVE-RKFNLLDLVHSDLCEFNGMLTRGGNRYFITFIDDCSRYTHVYLL 522
CV+SK +K K+ E R L+L+HSDLCE NG+LT+GG RYF+T IDD +R+ +VYLL
Sbjct: 469 CVQSKQPRKPHKAAEERNLAPLELLHSDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLL 528
Query: 523 KHKDDAFNAFKSYKAEVENQLNKTIKVLRSDRGGEYFSTKFDSFCEEHDIIHE 575
K KD+A + FK YKAEVENQL++ IK LRSDRGGE+FS +FD FCEEH IIHE
Sbjct: 529 KTKDEALDYFKIYKAEVENQLDRKIKRLRSDRGGEFFSNEFDLFCEEHGIIHE 581
>UniRef100_Q8RU93 Putative polyprotein from transposon TNT 1-94 [Oryza sativa]
Length = 1302
Score = 395 bits (1014), Expect = e-108
Identities = 233/593 (39%), Positives = 333/593 (55%), Gaps = 38/593 (6%)
Query: 4 DLVKLDRFDGTNFTRWQDKMIFLLTALKIYYVLD--PDLTPIAEPKDDDSDELKTERKKR 61
D ++ D+F G +F RWQ ++ LTA+K ++V P+ AE ++K+
Sbjct: 6 DALRPDKFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAE-----------QQKQF 54
Query: 62 REDELLCRGHIMNTLSDRLYDLYTDTQSAAKIWKTLEFKFKAEEEGIKKFLISKYFDFKM 121
E L G I++ L DRL ++Y A ++W L KF A + +++ ++ D+KM
Sbjct: 55 EEATTLFVGCILSVLGDRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIMEQFHDYKM 114
Query: 122 LDTKPILQQVHELQVLVNKIKAVKIDIRGAFQVGAIIAKLPPSWNGYRKKLLHNYEDFSL 181
D + +++Q HE+Q + +++ +K + F G IIAKLPPSW + L H +++S+
Sbjct: 115 ADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEYSV 174
Query: 182 EKIQKHLRIEEESKVRDKAESS--GFSKANTV---TTKGKKKYDGKQQHLGPKKEHNKFK 236
E + L +EE+++ +D A G S AN V K K KY +Q K++ K
Sbjct: 175 EGLIASLDVEEKAREKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQK----K 230
Query: 237 NNNGTKGPKGGCYVCGKPDHFARDCRQNK--------TKKEVNAV---QVDDEIIATVSE 285
NNN + C+VCG+ H AR C Q K T K N D +
Sbjct: 231 NNNNPNQDERTCFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGNLPT 290
Query: 286 VMAVKGKVPGWWYDTCASVHVSYDKASFKTYSESTDDQEVQMRNEVRSKVVGTGTVELNF 345
V +V WW DT A+VHV D + F +Y + V M N + V G GTV+L F
Sbjct: 291 VFSVNQST-NWWVDTGANVHVCADISLFSSYQVARGST-VLMGNGSHASVHGVGTVDLKF 348
Query: 346 TSGKKVTLVNVLHVPEMSRDLVSGDLLGKPGIKSVYESEKLILTRNGVFVGKGYSAEGMI 405
TSGK V L NV HVP + R+LVSG L + G K V+ES K++++++G F+GKGY G+
Sbjct: 349 TSGKIVQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGKGYECGGLF 408
Query: 406 KLCPIDNIINKVSNSAYMIDS-VSLWHSRLAHIGISTMNRLIKSKLI-SCNIHEFEKCEI 463
+ D V++ +D ++WHSRL HI M+RL LI +I + KC
Sbjct: 409 RFSLSDFCNKSVNHICGSVDDEANVWHSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHS 468
Query: 464 CVKSKMIKKHFKSVE-RKFNLLDLVHSDLCEFNGMLTRGGNRYFITFIDDCSRYTHVYLL 522
CV+SK +K K+ E R L+L+HSDLCE NG+LT+GG RYF+T IDD +R+ +VYLL
Sbjct: 469 CVQSKQPRKPHKAAEERNLAPLELLHSDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLL 528
Query: 523 KHKDDAFNAFKSYKAEVENQLNKTIKVLRSDRGGEYFSTKFDSFCEEHDIIHE 575
K KD+A + FK YKAEVENQL++ IK LRSDRGGE+FS +FD FCEEH IIHE
Sbjct: 529 KTKDEALDYFKIYKAEVENQLDRKIKRLRSDRGGEFFSNEFDLFCEEHGIIHE 581
>UniRef100_Q8H7V4 Putative polyprotein from transposon TNT [Oryza sativa]
Length = 1911
Score = 395 bits (1014), Expect = e-108
Identities = 233/593 (39%), Positives = 333/593 (55%), Gaps = 38/593 (6%)
Query: 4 DLVKLDRFDGTNFTRWQDKMIFLLTALKIYYVLD--PDLTPIAEPKDDDSDELKTERKKR 61
D ++ D+F G +F RWQ ++ LTA+K ++V P+ AE ++K+
Sbjct: 6 DALRPDKFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAE-----------QQKQF 54
Query: 62 REDELLCRGHIMNTLSDRLYDLYTDTQSAAKIWKTLEFKFKAEEEGIKKFLISKYFDFKM 121
E L G I++ L DRL ++Y A ++W L KF A + +++ ++ D+KM
Sbjct: 55 EEATTLFVGCILSVLGDRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIMEQFHDYKM 114
Query: 122 LDTKPILQQVHELQVLVNKIKAVKIDIRGAFQVGAIIAKLPPSWNGYRKKLLHNYEDFSL 181
D + +++Q HE+Q + +++ +K + F G IIAKLPPSW + L H +++S+
Sbjct: 115 ADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEYSV 174
Query: 182 EKIQKHLRIEEESKVRDKAESS--GFSKANTV---TTKGKKKYDGKQQHLGPKKEHNKFK 236
E + L +EE+++ +D A G S AN V K K KY +Q K++ K
Sbjct: 175 EGLIASLDVEEKAREKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQK----K 230
Query: 237 NNNGTKGPKGGCYVCGKPDHFARDCRQNK--------TKKEVNAV---QVDDEIIATVSE 285
NNN + C+VCG+ H AR C Q K T K N D +
Sbjct: 231 NNNNPNQDERTCFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGNLPT 290
Query: 286 VMAVKGKVPGWWYDTCASVHVSYDKASFKTYSESTDDQEVQMRNEVRSKVVGTGTVELNF 345
V +V WW DT A+VHV D + F +Y + V M N + V G GTV+L F
Sbjct: 291 VFSVNQST-NWWVDTGANVHVCADISLFSSYQVARGST-VLMGNGSHASVHGVGTVDLKF 348
Query: 346 TSGKKVTLVNVLHVPEMSRDLVSGDLLGKPGIKSVYESEKLILTRNGVFVGKGYSAEGMI 405
TSGK V L NV HVP + R+LVSG L + G K V+ES K++++++G F+GKGY G+
Sbjct: 349 TSGKIVQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGKGYECGGLF 408
Query: 406 KLCPIDNIINKVSNSAYMIDS-VSLWHSRLAHIGISTMNRLIKSKLI-SCNIHEFEKCEI 463
+ D V++ +D ++WHSRL HI M+RL LI +I + KC
Sbjct: 409 RFSLSDFCNKSVNHICGSVDDEANVWHSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHS 468
Query: 464 CVKSKMIKKHFKSVE-RKFNLLDLVHSDLCEFNGMLTRGGNRYFITFIDDCSRYTHVYLL 522
CV+SK +K K+ E R L+L+HSDLCE NG+LT+GG RYF+T IDD +R+ +VYLL
Sbjct: 469 CVQSKQPRKPHKAAEERNLAPLELLHSDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLL 528
Query: 523 KHKDDAFNAFKSYKAEVENQLNKTIKVLRSDRGGEYFSTKFDSFCEEHDIIHE 575
K KD+A + FK YKAEVENQL++ IK LRSDRGGE+FS +FD FCEEH IIHE
Sbjct: 529 KTKDEALDYFKIYKAEVENQLDRKIKRLRSDRGGEFFSNEFDLFCEEHGIIHE 581
>UniRef100_Q84ME8 Putative polyprotein [Oryza sativa]
Length = 1302
Score = 395 bits (1014), Expect = e-108
Identities = 233/593 (39%), Positives = 333/593 (55%), Gaps = 38/593 (6%)
Query: 4 DLVKLDRFDGTNFTRWQDKMIFLLTALKIYYVLD--PDLTPIAEPKDDDSDELKTERKKR 61
D ++ D+F G +F RWQ ++ LTA+K ++V P+ AE ++K+
Sbjct: 6 DALRPDKFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAE-----------QQKQF 54
Query: 62 REDELLCRGHIMNTLSDRLYDLYTDTQSAAKIWKTLEFKFKAEEEGIKKFLISKYFDFKM 121
E L G I++ L DRL ++Y A ++W L KF A + +++ ++ D+KM
Sbjct: 55 EEATTLFVGCILSVLGDRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIMEQFHDYKM 114
Query: 122 LDTKPILQQVHELQVLVNKIKAVKIDIRGAFQVGAIIAKLPPSWNGYRKKLLHNYEDFSL 181
D + +++Q HE+Q + +++ +K + F G IIAKLPPSW + L H +++S+
Sbjct: 115 ADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEYSV 174
Query: 182 EKIQKHLRIEEESKVRDKAESS--GFSKANTV---TTKGKKKYDGKQQHLGPKKEHNKFK 236
E + L +EE+++ +D A G S AN V K K KY +Q K++ K
Sbjct: 175 EGLIASLDVEEKAREKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQK----K 230
Query: 237 NNNGTKGPKGGCYVCGKPDHFARDCRQNK--------TKKEVNAV---QVDDEIIATVSE 285
NNN + C+VCG+ H AR C Q K T K N D +
Sbjct: 231 NNNNPNQDERTCFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGNLPT 290
Query: 286 VMAVKGKVPGWWYDTCASVHVSYDKASFKTYSESTDDQEVQMRNEVRSKVVGTGTVELNF 345
V +V WW DT A+VHV D + F +Y + V M N + V G GTV+L F
Sbjct: 291 VFSVNQST-NWWVDTRANVHVCADISLFSSYQVARGST-VLMGNGSHASVHGVGTVDLKF 348
Query: 346 TSGKKVTLVNVLHVPEMSRDLVSGDLLGKPGIKSVYESEKLILTRNGVFVGKGYSAEGMI 405
TSGK V L NV HVP + R+LVSG L + G K V+ES K++++++G F+GKGY G+
Sbjct: 349 TSGKIVQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGKGYECGGLF 408
Query: 406 KLCPIDNIINKVSNSAYMIDS-VSLWHSRLAHIGISTMNRLIKSKLI-SCNIHEFEKCEI 463
+ D V++ +D ++WHSRL HI M+RL LI +I + KC
Sbjct: 409 RFSLSDFCNKSVNHICGSVDDEANVWHSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHS 468
Query: 464 CVKSKMIKKHFKSVE-RKFNLLDLVHSDLCEFNGMLTRGGNRYFITFIDDCSRYTHVYLL 522
CV+SK +K K+ E R L+L+HSDLCE NG+LT+GG RYF+T IDD +R+ +VYLL
Sbjct: 469 CVQSKQPRKPHKAAEERNLAPLELLHSDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLL 528
Query: 523 KHKDDAFNAFKSYKAEVENQLNKTIKVLRSDRGGEYFSTKFDSFCEEHDIIHE 575
K KD+A + FK YKAEVENQL++ IK LRSDRGGE+FS +FD FCEEH IIHE
Sbjct: 529 KTKDEALDYFKIYKAEVENQLDRKIKRLRSDRGGEFFSNEFDLFCEEHGIIHE 581
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.318 0.135 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 978,357,115
Number of Sequences: 2790947
Number of extensions: 42174940
Number of successful extensions: 141969
Number of sequences better than 10.0: 946
Number of HSP's better than 10.0 without gapping: 604
Number of HSP's successfully gapped in prelim test: 346
Number of HSP's that attempted gapping in prelim test: 139211
Number of HSP's gapped (non-prelim): 1534
length of query: 578
length of database: 848,049,833
effective HSP length: 133
effective length of query: 445
effective length of database: 476,853,882
effective search space: 212199977490
effective search space used: 212199977490
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 78 (34.7 bits)
Lotus: description of TM0044a.5