BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0036c.6
(70 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_O65154 RNA polymerase II transcriptional coactivator K... 112 2e-24
UniRef100_Q69SU7 Transcriptional coactivator p15 (PC4) family pr... 100 9e-21
UniRef100_Q9FY90 Putative transcriptional co-activator [Arabidop... 82 3e-15
UniRef100_Q9AVE8 Putative transcriptional coactivator [Brassica ... 72 3e-12
UniRef100_O65155 RNA polymerase II transcriptional coactivator K... 71 8e-12
UniRef100_Q68Y58 General transcriptional coactivator [Oryzias la... 69 3e-11
UniRef100_UPI00003601AC UPI00003601AC UniRef100 entry 68 7e-11
UniRef100_UPI000034DCA8 UPI000034DCA8 UniRef100 entry 67 9e-11
UniRef100_UPI00002ECF1A UPI00002ECF1A UniRef100 entry 67 9e-11
UniRef100_Q94JE5 P0684B02.23 protein [Oryza sativa] 67 1e-10
UniRef100_UPI0000234D98 UPI0000234D98 UniRef100 entry 67 2e-10
UniRef100_UPI0000249B4C UPI0000249B4C UniRef100 entry 66 2e-10
UniRef100_Q6E433 Activated RNA polymerase II transcription cofac... 66 2e-10
UniRef100_P11031 Activated RNA polymerase II transcriptional coa... 66 2e-10
UniRef100_Q5ZK63 Hypothetical protein [Gallus gallus] 65 3e-10
UniRef100_UPI00001D0D38 UPI00001D0D38 UniRef100 entry 65 4e-10
UniRef100_Q6C485 Similar to wi|NCU04584.1 Neurospora crassa NCU0... 65 4e-10
UniRef100_UPI000042CB00 UPI000042CB00 UniRef100 entry 63 2e-09
UniRef100_Q63396 Activated RNA polymerase II transcriptional coa... 63 2e-09
UniRef100_UPI0000304CCC UPI0000304CCC UniRef100 entry 63 2e-09
>UniRef100_O65154 RNA polymerase II transcriptional coactivator KIWI [Arabidopsis
thaliana]
Length = 107
Score = 112 bits (281), Expect = 2e-24
Identities = 50/67 (74%), Positives = 60/67 (88%)
Query: 3 DSIVVCEISKNRRVSVRNWQGRIVVDIREFYVKDGKQMPGKKGISLTMDQWNVLRNHIEE 62
D IVVC ISKNRRVSVRNW G+I +DIREFYVKDGK +PGKKGISL++DQWN LRNH E+
Sbjct: 39 DDIVVCNISKNRRVSVRNWNGKIWIDIREFYVKDGKTLPGKKGISLSVDQWNTLRNHAED 98
Query: 63 IDKAVNE 69
I+KA+++
Sbjct: 99 IEKALSD 105
>UniRef100_Q69SU7 Transcriptional coactivator p15 (PC4) family protein-like [Oryza
sativa]
Length = 101
Score = 100 bits (249), Expect = 9e-21
Identities = 44/68 (64%), Positives = 57/68 (83%)
Query: 3 DSIVVCEISKNRRVSVRNWQGRIVVDIREFYVKDGKQMPGKKGISLTMDQWNVLRNHIEE 62
D IVV +ISKNRRV+VR W G++VVDIREFY KDGK +PG+KGI L MDQW +LR++I+
Sbjct: 33 DDIVVAQISKNRRVAVRTWNGKVVVDIREFYEKDGKTLPGRKGIQLPMDQWKILRDNIKA 92
Query: 63 IDKAVNES 70
ID+A+ E+
Sbjct: 93 IDEAIKEN 100
>UniRef100_Q9FY90 Putative transcriptional co-activator [Arabidopsis thaliana]
Length = 110
Score = 82.4 bits (202), Expect = 3e-15
Identities = 39/69 (56%), Positives = 53/69 (76%), Gaps = 2/69 (2%)
Query: 3 DSIVVCEISKNRRVSVRNWQGRIVVDIREFYVKDGKQMP--GKKGISLTMDQWNVLRNHI 60
+ I +C + KNRRV VRN GRI + IR+F+VKDG +P K+GISL+++QWN LRNH
Sbjct: 38 EDIFICNLDKNRRVFVRNCNGRIWIAIRQFFVKDGITLPCNSKQGISLSLEQWNDLRNHE 97
Query: 61 EEIDKAVNE 69
E+IDKA++E
Sbjct: 98 EDIDKALSE 106
>UniRef100_Q9AVE8 Putative transcriptional coactivator [Brassica campestris]
Length = 165
Score = 72.4 bits (176), Expect = 3e-12
Identities = 29/69 (42%), Positives = 49/69 (70%)
Query: 1 DPDSIVVCEISKNRRVSVRNWQGRIVVDIREFYVKDGKQMPGKKGISLTMDQWNVLRNHI 60
D +++C +S RRV+++ ++G+ +V IRE+Y KDGK++P KGISLT +QW+ + +I
Sbjct: 92 DDGDLIICRLSDKRRVTIQEFRGKSLVSIREYYKKDGKELPSSKGISLTDEQWSTFKKNI 151
Query: 61 EEIDKAVNE 69
I+ AV +
Sbjct: 152 PAIEAAVKK 160
>UniRef100_O65155 RNA polymerase II transcriptional coactivator KELP [Arabidopsis
thaliana]
Length = 165
Score = 70.9 bits (172), Expect = 8e-12
Identities = 28/69 (40%), Positives = 49/69 (70%)
Query: 1 DPDSIVVCEISKNRRVSVRNWQGRIVVDIREFYVKDGKQMPGKKGISLTMDQWNVLRNHI 60
D +++C +S RRV+++ ++G+ +V IRE+Y KDGK++P KGISLT +QW+ + ++
Sbjct: 92 DDGDLIICRLSDKRRVTIQEFKGKSLVSIREYYKKDGKELPTSKGISLTDEQWSTFKKNM 151
Query: 61 EEIDKAVNE 69
I+ AV +
Sbjct: 152 PAIENAVKK 160
>UniRef100_Q68Y58 General transcriptional coactivator [Oryzias latipes]
Length = 125
Score = 68.9 bits (167), Expect = 3e-11
Identities = 30/63 (47%), Positives = 50/63 (78%), Gaps = 1/63 (1%)
Query: 9 EISKNRRVSVRNWQGRIVVDIREFYV-KDGKQMPGKKGISLTMDQWNVLRNHIEEIDKAV 67
+I K R VSVR+++G++++DIRE+++ +DG+ PGKKGISL +QWN L++ + EID+A+
Sbjct: 63 QIGKMRYVSVRDFKGKVLIDIREYWMNQDGEMKPGKKGISLNPEQWNQLKDQMSEIDEAI 122
Query: 68 NES 70
+
Sbjct: 123 KRT 125
>UniRef100_UPI00003601AC UPI00003601AC UniRef100 entry
Length = 125
Score = 67.8 bits (164), Expect = 7e-11
Identities = 30/62 (48%), Positives = 49/62 (78%), Gaps = 1/62 (1%)
Query: 9 EISKNRRVSVRNWQGRIVVDIREFYV-KDGKQMPGKKGISLTMDQWNVLRNHIEEIDKAV 67
+I K R VSVR+++G++++DIRE+++ +DG+ PGKKGISL +QWN L++ I +ID A+
Sbjct: 63 QIGKMRYVSVRDFKGKVLIDIREYWMNQDGEMKPGKKGISLNPEQWNQLKDQIADIDDAI 122
Query: 68 NE 69
+
Sbjct: 123 KK 124
>UniRef100_UPI000034DCA8 UPI000034DCA8 UniRef100 entry
Length = 125
Score = 67.4 bits (163), Expect = 9e-11
Identities = 30/62 (48%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
Query: 9 EISKNRRVSVRNWQGRIVVDIREFYVK-DGKQMPGKKGISLTMDQWNVLRNHIEEIDKAV 67
+I K R VSVR+++G++++DIRE+++ DG+ PGKKGISL +QWN L++ I +ID A+
Sbjct: 63 QIGKMRYVSVRDFKGKVLIDIREYWMNPDGEMKPGKKGISLNPEQWNQLKDQIADIDDAI 122
Query: 68 NE 69
+
Sbjct: 123 KK 124
>UniRef100_UPI00002ECF1A UPI00002ECF1A UniRef100 entry
Length = 89
Score = 67.4 bits (163), Expect = 9e-11
Identities = 29/60 (48%), Positives = 44/60 (73%)
Query: 7 VCEISKNRRVSVRNWQGRIVVDIREFYVKDGKQMPGKKGISLTMDQWNVLRNHIEEIDKA 66
VC + ++RRV+V + G +++ IREFY KDG ++PGKKGISL+ DQW ++ H + I+ A
Sbjct: 26 VCVLGRDRRVTVDIFNGSVMIGIREFYEKDGAKLPGKKGISLSKDQWELVTRHEDLIEAA 85
>UniRef100_Q94JE5 P0684B02.23 protein [Oryza sativa]
Length = 184
Score = 67.0 bits (162), Expect = 1e-10
Identities = 27/69 (39%), Positives = 49/69 (70%), Gaps = 1/69 (1%)
Query: 1 DPDSIVVCEISKNRRVSVRNWQGRIVVDIREFYVKDGKQMPGKKGISLTMDQWNVLRNHI 60
D +++C +S RRV+++ ++G+ ++ IRE+Y KDGK++P KGISLT++QW R+ +
Sbjct: 111 DEGDLILCRLSARRRVTLQEFKGKTLLSIREYYFKDGKELPA-KGISLTVEQWEAFRDSV 169
Query: 61 EEIDKAVNE 69
I+ A+ +
Sbjct: 170 PAIEDAIKK 178
>UniRef100_UPI0000234D98 UPI0000234D98 UniRef100 entry
Length = 168
Score = 66.6 bits (161), Expect = 2e-10
Identities = 31/69 (44%), Positives = 51/69 (72%)
Query: 1 DPDSIVVCEISKNRRVSVRNWQGRIVVDIREFYVKDGKQMPGKKGISLTMDQWNVLRNHI 60
D + + EISK RRV++ +++G+ +V+IRE+Y KDG+++PGKKGISL +DQ++ L +
Sbjct: 50 DSNGDIYWEISKMRRVTISSFRGKTMVNIREYYEKDGEELPGKKGISLPIDQFSSLVTLL 109
Query: 61 EEIDKAVNE 69
EI+ + E
Sbjct: 110 PEIEIVLQE 118
>UniRef100_UPI0000249B4C UPI0000249B4C UniRef100 entry
Length = 122
Score = 66.2 bits (160), Expect = 2e-10
Identities = 30/60 (50%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
Query: 9 EISKNRRVSVRNWQGRIVVDIREFYV-KDGKQMPGKKGISLTMDQWNVLRNHIEEIDKAV 67
+I K R VSVR+++G++++DIRE+++ ++G+ PG+KGISL +QWN L+ I EID AV
Sbjct: 61 QIGKMRYVSVRDFKGKVLIDIREYWMDQEGEMKPGRKGISLNPEQWNQLKEQISEIDDAV 120
>UniRef100_Q6E433 Activated RNA polymerase II transcription cofactor 4 [Homo
sapiens]
Length = 73
Score = 66.2 bits (160), Expect = 2e-10
Identities = 30/62 (48%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
Query: 9 EISKNRRVSVRNWQGRIVVDIREFYV-KDGKQMPGKKGISLTMDQWNVLRNHIEEIDKAV 67
+I K R VSVR+++G+I++DIRE+++ +G+ PG+KGISL M+QW+ L+ I +ID AV
Sbjct: 11 QIGKMRYVSVRDFKGKILIDIREYWMDSEGEMKPGRKGISLNMEQWSQLKEQISDIDDAV 70
Query: 68 NE 69
+
Sbjct: 71 RK 72
>UniRef100_P11031 Activated RNA polymerase II transcriptional coactivator p15
precursor [Mus musculus]
Length = 126
Score = 66.2 bits (160), Expect = 2e-10
Identities = 30/62 (48%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
Query: 9 EISKNRRVSVRNWQGRIVVDIREFYV-KDGKQMPGKKGISLTMDQWNVLRNHIEEIDKAV 67
+I K R VSVR+++G+I++DIRE+++ +G+ PG+KGISL M+QW+ L+ I +ID AV
Sbjct: 64 QIGKMRYVSVRDFKGKILIDIREYWMDSEGEMKPGRKGISLNMEQWSQLKEQISDIDDAV 123
Query: 68 NE 69
+
Sbjct: 124 RK 125
>UniRef100_Q5ZK63 Hypothetical protein [Gallus gallus]
Length = 126
Score = 65.5 bits (158), Expect = 3e-10
Identities = 29/62 (46%), Positives = 48/62 (76%), Gaps = 1/62 (1%)
Query: 9 EISKNRRVSVRNWQGRIVVDIREFYV-KDGKQMPGKKGISLTMDQWNVLRNHIEEIDKAV 67
+I K R VSVR+++G++++DIRE+++ ++G+ PG+KGISL +QWN L+ I +ID AV
Sbjct: 64 QIGKMRYVSVRDFKGKVLIDIREYWMDQEGEMKPGRKGISLNPEQWNQLKEQISDIDDAV 123
Query: 68 NE 69
+
Sbjct: 124 RK 125
>UniRef100_UPI00001D0D38 UPI00001D0D38 UniRef100 entry
Length = 126
Score = 65.1 bits (157), Expect = 4e-10
Identities = 29/66 (43%), Positives = 49/66 (73%), Gaps = 1/66 (1%)
Query: 5 IVVCEISKNRRVSVRNWQGRIVVDIREFYV-KDGKQMPGKKGISLTMDQWNVLRNHIEEI 63
++ +I K R VSVR+++G+I++ IRE+++ DG+ PG+KGISL M+QW+ L+ I ++
Sbjct: 60 MIAFQIGKVRYVSVRDFKGKILIGIREYWMDSDGEMKPGRKGISLNMEQWSQLKEQISDV 119
Query: 64 DKAVNE 69
D AV +
Sbjct: 120 DAAVRK 125
>UniRef100_Q6C485 Similar to wi|NCU04584.1 Neurospora crassa NCU04584. 1 predicted
protein [Yarrowia lipolytica]
Length = 136
Score = 65.1 bits (157), Expect = 4e-10
Identities = 30/61 (49%), Positives = 43/61 (70%)
Query: 7 VCEISKNRRVSVRNWQGRIVVDIREFYVKDGKQMPGKKGISLTMDQWNVLRNHIEEIDKA 66
V E+ ++RV+VR ++GR ++DIR FY KDGK++PG KGISLT Q+ L ++ I A
Sbjct: 6 VFELGNDKRVTVREFKGRTLIDIRAFYEKDGKKLPGSKGISLTEAQFEELSEQVQSIQDA 65
Query: 67 V 67
V
Sbjct: 66 V 66
>UniRef100_UPI000042CB00 UPI000042CB00 UniRef100 entry
Length = 114
Score = 63.2 bits (152), Expect = 2e-09
Identities = 29/63 (46%), Positives = 45/63 (71%), Gaps = 2/63 (3%)
Query: 9 EISKNRRVSVRNWQGRIVVDIREFYV--KDGKQMPGKKGISLTMDQWNVLRNHIEEIDKA 66
++S+ RR++VR ++G+ +VDIRE Y G PG KGISLT +QW +LRN+I+ +D+
Sbjct: 49 KLSEYRRLTVRTFKGKTLVDIREMYKDKSSGALKPGSKGISLTAEQWEILRNNIQNVDEM 108
Query: 67 VNE 69
V +
Sbjct: 109 VKK 111
>UniRef100_Q63396 Activated RNA polymerase II transcriptional coactivator p15 [Rattus
norvegicus]
Length = 119
Score = 63.2 bits (152), Expect = 2e-09
Identities = 29/62 (46%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Query: 9 EISKNRRVSVRNWQGRIVVDIREFYV-KDGKQMPGKKGISLTMDQWNVLRNHIEEIDKAV 67
+I K R VSVR+++G+I++DIRE+++ +G+ P +KGISL M+QW+ L+ I +ID AV
Sbjct: 57 QIGKMRYVSVRDFKGKILIDIREYWMDSEGEMKPRRKGISLNMEQWSQLKEQISDIDDAV 116
Query: 68 NE 69
+
Sbjct: 117 RK 118
>UniRef100_UPI0000304CCC UPI0000304CCC UniRef100 entry
Length = 89
Score = 62.8 bits (151), Expect = 2e-09
Identities = 30/63 (47%), Positives = 44/63 (69%)
Query: 7 VCEISKNRRVSVRNWQGRIVVDIREFYVKDGKQMPGKKGISLTMDQWNVLRNHIEEIDKA 66
VCEIS RR SV ++GR+ V+IRE+Y KDG+ +PG KG +L+ + +L + E+ID+
Sbjct: 24 VCEISNKRRCSVGKFKGRVFVNIREYYEKDGQLLPGAKGAALSAEAAAILVANAEKIDER 83
Query: 67 VNE 69
V E
Sbjct: 84 VRE 86
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.317 0.136 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 116,764,158
Number of Sequences: 2790947
Number of extensions: 3577790
Number of successful extensions: 9139
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 9066
Number of HSP's gapped (non-prelim): 50
length of query: 70
length of database: 848,049,833
effective HSP length: 46
effective length of query: 24
effective length of database: 719,666,271
effective search space: 17271990504
effective search space used: 17271990504
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 68 (30.8 bits)
Lotus: description of TM0036c.6