BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0035.12
(125 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q7RTC8 Putative copper efflux ATPase [Plasmodium yoeli... 36 0.23
UniRef100_UPI000021B955 UPI000021B955 UniRef100 entry 34 0.66
UniRef100_UPI000032AA75 UPI000032AA75 UniRef100 entry 33 1.5
UniRef100_UPI0000437B1E UPI0000437B1E UniRef100 entry 33 1.9
UniRef100_Q89VT1 Blr0964 protein [Bradyrhizobium japonicum] 32 2.5
UniRef100_O17460 Hypothetical protein [Schistosoma mansoni] 32 2.5
UniRef100_UPI000031842C UPI000031842C UniRef100 entry 32 3.3
UniRef100_UPI000028BD00 UPI000028BD00 UniRef100 entry 32 3.3
UniRef100_Q5X4G2 Endopeptidase Clp ATP-binding chain B [Legionel... 32 3.3
UniRef100_Q5WVU7 Endopeptidase Clp ATP-binding chain B [Legionel... 32 3.3
UniRef100_Q5ZUP3 ClpB protein [Legionella pneumophila subsp. pne... 32 3.3
UniRef100_UPI00003614EE UPI00003614EE UniRef100 entry 32 4.3
UniRef100_UPI00003614ED UPI00003614ED UniRef100 entry 32 4.3
UniRef100_UPI00003614EC UPI00003614EC UniRef100 entry 32 4.3
UniRef100_UPI00003083F6 UPI00003083F6 UniRef100 entry 31 5.6
UniRef100_Q86HT7 Hypothetical protein [Dictyostelium discoideum] 31 5.6
UniRef100_UPI0000439238 UPI0000439238 UniRef100 entry 31 7.3
UniRef100_UPI0000246610 UPI0000246610 UniRef100 entry 31 7.3
UniRef100_UPI0000364C30 UPI0000364C30 UniRef100 entry 31 7.3
UniRef100_UPI00002CF142 UPI00002CF142 UniRef100 entry 31 7.3
>UniRef100_Q7RTC8 Putative copper efflux ATPase [Plasmodium yoelii yoelii]
Length = 1976
Score = 35.8 bits (81), Expect = 0.23
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 2 IHNPGQHHHSHRRSFFTHINWAPDQH-PHEVLAFMPSLFKSN---DLARRKRASDGDKSL 57
+HN H +FF H N + Q+ P V M + + SN D ++K+ +D ++ +
Sbjct: 541 VHNLNNEHKVFNNNFFEHDNISLSQNIPFSVSHKMDNNYNSNENLDFRKKKKKNDDEEKI 600
Query: 58 NKTQEEKAS 66
K Q+E AS
Sbjct: 601 KKKQQEIAS 609
>UniRef100_UPI000021B955 UPI000021B955 UniRef100 entry
Length = 1073
Score = 34.3 bits (77), Expect = 0.66
Identities = 24/70 (34%), Positives = 33/70 (46%), Gaps = 6/70 (8%)
Query: 13 RRSFFTHINWAPDQHPHEVLAFMPSLFKSNDLARRKRASDGDKSL-----NKTQEEKASI 67
R S+ + IN + P EV F P LF + D A S+G +L + Q++ SI
Sbjct: 267 RGSWLSEINLIGHEGPTEVTQFSPRLFHTTDPALANGNSNGSSNLVTVIASAGQDKTLSI 326
Query: 68 WNKTQIKTPL 77
WN T PL
Sbjct: 327 WN-TNTSRPL 335
>UniRef100_UPI000032AA75 UPI000032AA75 UniRef100 entry
Length = 262
Score = 33.1 bits (74), Expect = 1.5
Identities = 17/57 (29%), Positives = 32/57 (55%)
Query: 44 LARRKRASDGDKSLNKTQEEKASIWNKTQIKTPLNKASTFEATKLRSGTCIFRSGAA 100
L R S G+ LN+ + +A++++ ++ +N+AST E ++ R I+R G A
Sbjct: 101 LGRGPSISLGNIGLNRPRRRQANLFDLARLSEYINRASTMEISQSRQEIRIYRKGEA 157
>UniRef100_UPI0000437B1E UPI0000437B1E UniRef100 entry
Length = 776
Score = 32.7 bits (73), Expect = 1.9
Identities = 19/48 (39%), Positives = 26/48 (53%), Gaps = 1/48 (2%)
Query: 54 DKSLNKTQEEKASIWNKTQIKTPLNKASTFEATKL-RSGTCIFRSGAA 100
D + T+EEK+S+W+ Q A+T EA L RS TC GA+
Sbjct: 152 DSTEELTEEEKSSVWDSHQADNGHELANTHEAANLDRSHTCQLDIGAS 199
>UniRef100_Q89VT1 Blr0964 protein [Bradyrhizobium japonicum]
Length = 524
Score = 32.3 bits (72), Expect = 2.5
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 30 EVLAFMPSLFKSNDLARRKRASDGDKSLNKTQEEKASIWNKTQIKTPLNKASTFEATKL 88
E+LA+M + + ND+ARR R S + + ++ ++W + T +A TF A L
Sbjct: 116 EILAYMNEVIEDNDIARRIRYKHKINSASWSSDQ--NLWTIEAVTTDTGEARTFTANFL 172
>UniRef100_O17460 Hypothetical protein [Schistosoma mansoni]
Length = 406
Score = 32.3 bits (72), Expect = 2.5
Identities = 26/106 (24%), Positives = 55/106 (51%), Gaps = 7/106 (6%)
Query: 20 INWAPDQHPHEVLAFMPSLFKSNDLARRKRASDGDKSLNKTQEEKASIWNKTQIKTPLNK 79
IN +QH +E+L + DL R R S+ + +LN ++E+A+ +N ++ LN+
Sbjct: 243 INKQDEQHKNELLHNNSNDNIYEDL--RNRLSEVENNLNAAEKERATFYN--LYRSALNE 298
Query: 80 ASTFEATKLRSGTCIFRSGAAVRFVILGFAE---RREMEEEEKRKQ 122
+++T +++ + + G +V+ + + E E+ + RKQ
Sbjct: 299 VDHYKSTLIQTEEVLAKLGXSVKQTESKWRQLLSESEFEQIQLRKQ 344
>UniRef100_UPI000031842C UPI000031842C UniRef100 entry
Length = 1792
Score = 32.0 bits (71), Expect = 3.3
Identities = 16/45 (35%), Positives = 25/45 (55%)
Query: 47 RKRASDGDKSLNKTQEEKASIWNKTQIKTPLNKASTFEATKLRSG 91
RK+AS D + +E A + KT+ + PL + S+ E+ K SG
Sbjct: 1018 RKKASTEDDRGSSDEETPAELVKKTESRKPLRRGSSMESDKPESG 1062
>UniRef100_UPI000028BD00 UPI000028BD00 UniRef100 entry
Length = 262
Score = 32.0 bits (71), Expect = 3.3
Identities = 16/57 (28%), Positives = 32/57 (56%)
Query: 44 LARRKRASDGDKSLNKTQEEKASIWNKTQIKTPLNKASTFEATKLRSGTCIFRSGAA 100
L R S G+ LN+ + +A++++ ++ +N++ST E ++ R I+R G A
Sbjct: 101 LGRGPSISLGNIGLNRPRRRQANLFDLARLSEYINRSSTMEISQSRQEIRIYRKGEA 157
>UniRef100_Q5X4G2 Endopeptidase Clp ATP-binding chain B [Legionella pneumophila str.
Paris]
Length = 858
Score = 32.0 bits (71), Expect = 3.3
Identities = 22/66 (33%), Positives = 33/66 (49%), Gaps = 11/66 (16%)
Query: 37 SLFKSNDLARRKRASDGDKSLNKTQE-----------EKASIWNKTQIKTPLNKASTFEA 85
+L K ND A +KR D KS+++ ++ EKA++ TQIK L +A
Sbjct: 428 ALKKENDEASKKRLVDLQKSIDELEQNYSDLEEIWKAEKATMQGSTQIKEALEQAKLEME 487
Query: 86 TKLRSG 91
T R+G
Sbjct: 488 TARRAG 493
>UniRef100_Q5WVU7 Endopeptidase Clp ATP-binding chain B [Legionella pneumophila str.
Lens]
Length = 858
Score = 32.0 bits (71), Expect = 3.3
Identities = 22/66 (33%), Positives = 33/66 (49%), Gaps = 11/66 (16%)
Query: 37 SLFKSNDLARRKRASDGDKSLNKTQE-----------EKASIWNKTQIKTPLNKASTFEA 85
+L K ND A +KR D KS+++ ++ EKA++ TQIK L +A
Sbjct: 428 ALKKENDEASKKRLVDLQKSIDELEQNYSDLEEIWKAEKATMQGSTQIKEALEQAKLEME 487
Query: 86 TKLRSG 91
T R+G
Sbjct: 488 TARRAG 493
>UniRef100_Q5ZUP3 ClpB protein [Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
Length = 858
Score = 32.0 bits (71), Expect = 3.3
Identities = 22/66 (33%), Positives = 33/66 (49%), Gaps = 11/66 (16%)
Query: 37 SLFKSNDLARRKRASDGDKSLNKTQE-----------EKASIWNKTQIKTPLNKASTFEA 85
+L K ND A +KR D KS+++ ++ EKA++ TQIK L +A
Sbjct: 428 ALKKENDEASKKRLVDLQKSIDELEQNYSDLEEIWKAEKATMQGSTQIKEALEQAKLEME 487
Query: 86 TKLRSG 91
T R+G
Sbjct: 488 TARRAG 493
>UniRef100_UPI00003614EE UPI00003614EE UniRef100 entry
Length = 697
Score = 31.6 bits (70), Expect = 4.3
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 38 LFKSNDLARRKRASDGDKS-LNKTQEEKASIWNKTQIKTPLNKASTFEATKLRSGTCIFR 96
L + NDL + + G+ + KTQE+ + + T + K A + S T I
Sbjct: 77 LLQGNDLKIDESSLTGESDHVRKTQEKDPMLLSGTHVMEGSGKM-VVTAVGVNSQTGII- 134
Query: 97 SGAAVRFVILGFAERREMEEEEKRKQKQ 124
F +LG AE + EEEEK+K+++
Sbjct: 135 ------FTLLGSAEEDDDEEEEKKKEEK 156
>UniRef100_UPI00003614ED UPI00003614ED UniRef100 entry
Length = 1281
Score = 31.6 bits (70), Expect = 4.3
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 38 LFKSNDLARRKRASDGDKS-LNKTQEEKASIWNKTQIKTPLNKASTFEATKLRSGTCIFR 96
L + NDL + + G+ + KTQE+ + + T + K A + S T I
Sbjct: 226 LLQGNDLKIDESSLTGESDHVRKTQEKDPMLLSGTHVMEGSGKM-VVTAVGVNSQTGII- 283
Query: 97 SGAAVRFVILGFAERREMEEEEKRKQKQ 124
F +LG AE + EEEEK+K+++
Sbjct: 284 ------FTLLGSAEEDDDEEEEKKKEEK 305
>UniRef100_UPI00003614EC UPI00003614EC UniRef100 entry
Length = 1260
Score = 31.6 bits (70), Expect = 4.3
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 38 LFKSNDLARRKRASDGDKS-LNKTQEEKASIWNKTQIKTPLNKASTFEATKLRSGTCIFR 96
L + NDL + + G+ + KTQE+ + + T + K A + S T I
Sbjct: 217 LLQGNDLKIDESSLTGESDHVRKTQEKDPMLLSGTHVMEGSGKM-VVTAVGVNSQTGII- 274
Query: 97 SGAAVRFVILGFAERREMEEEEKRKQKQ 124
F +LG AE + EEEEK+K+++
Sbjct: 275 ------FTLLGSAEEDDDEEEEKKKEEK 296
>UniRef100_UPI00003083F6 UPI00003083F6 UniRef100 entry
Length = 280
Score = 31.2 bits (69), Expect = 5.6
Identities = 19/74 (25%), Positives = 39/74 (52%), Gaps = 14/74 (18%)
Query: 14 RSFFTHINWAPDQHPHEV----LAFMPSLFKS---------NDLARRKRASDGDKSLNKT 60
+S F I WA D + H + +F+P++ ++ N+++ K ++ DKS N T
Sbjct: 15 KSIFNTILWASDYYHHPIGEVIFSFIPTILRNPGNKIIAPTNEISTYK-LNENDKSFNLT 73
Query: 61 QEEKASIWNKTQIK 74
+E++ ++ +IK
Sbjct: 74 KEQEINLTKLKKIK 87
>UniRef100_Q86HT7 Hypothetical protein [Dictyostelium discoideum]
Length = 696
Score = 31.2 bits (69), Expect = 5.6
Identities = 21/86 (24%), Positives = 44/86 (50%), Gaps = 13/86 (15%)
Query: 49 RASDGDKSLNKTQEEKASIWNKTQIKTPLNKASTFE----ATKLRSGTCIFRS------- 97
R + + ++N Q++++ N +QIK NK+S + A K+R F++
Sbjct: 594 RNENENTNINHEQQQQSKTVNISQIKNDANKSSEIDDDGIARKIRDSFTHFQTREELLDA 653
Query: 98 --GAAVRFVILGFAERREMEEEEKRK 121
A++FV A ++E+++E++ K
Sbjct: 654 IQNLAIKFVKQTSALKKELQQEQQEK 679
>UniRef100_UPI0000439238 UPI0000439238 UniRef100 entry
Length = 1584
Score = 30.8 bits (68), Expect = 7.3
Identities = 23/79 (29%), Positives = 34/79 (42%), Gaps = 11/79 (13%)
Query: 47 RKRASDGDKSLNKTQEEKASIWNKTQIKTPLNKASTFEATKLRSGTCIFRSGAAVRFVIL 106
RK + + S +K E +W+ E+T+ R+ + R G + IL
Sbjct: 589 RKLELENESSESKRNETIGQMWS-----------GKMESTRSRTSSSSGRLGRSDDCDIL 637
Query: 107 GFAERREMEEEEKRKQKQS 125
FA+RR EE RK QS
Sbjct: 638 PFADRRRFFEETSRKLSQS 656
>UniRef100_UPI0000246610 UPI0000246610 UniRef100 entry
Length = 463
Score = 30.8 bits (68), Expect = 7.3
Identities = 25/101 (24%), Positives = 44/101 (42%), Gaps = 5/101 (4%)
Query: 16 FFTHINWAPDQHPHEVLAFMPSLFKSNDLARRKRASDGDKS--LNKTQEEKASIWNKTQI 73
+ +H+++A +P + + SL K +L ++ DGD+S T +K W+K
Sbjct: 200 YLSHLSYANYLNPQQTPMVVWSLLKCRELLAPRQDIDGDESGFFYMTLFDK---WSKDPA 256
Query: 74 KTPLNKASTFEATKLRSGTCIFRSGAAVRFVILGFAERREM 114
+ L +T + K S FR G + L A R +
Sbjct: 257 QRELCAYATQQGFKSTSWQAGFRQGGGMAIAALARAARESI 297
>UniRef100_UPI0000364C30 UPI0000364C30 UniRef100 entry
Length = 549
Score = 30.8 bits (68), Expect = 7.3
Identities = 17/43 (39%), Positives = 23/43 (52%)
Query: 36 PSLFKSNDLARRKRASDGDKSLNKTQEEKASIWNKTQIKTPLN 78
PSLFK L + KR S DK +T++EK + K PL+
Sbjct: 218 PSLFKMVSLGKLKRESLSDKMSQETEDEKEEEEAVVKTKDPLS 260
>UniRef100_UPI00002CF142 UPI00002CF142 UniRef100 entry
Length = 199
Score = 30.8 bits (68), Expect = 7.3
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 14/74 (18%)
Query: 14 RSFFTHINWAPDQHPHEV----LAFMPSLFKS---------NDLARRKRASDGDKSLNKT 60
+S F I WA D + H + +F+P++ ++ N+++ K D DKS N T
Sbjct: 15 KSIFNTILWASDYYHHPIGEVIFSFIPTVLRNPGNKIIAPTNEISTYKLNED-DKSFNLT 73
Query: 61 QEEKASIWNKTQIK 74
+E++ ++ +IK
Sbjct: 74 KEQEINLTKLKKIK 87
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.317 0.129 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 206,199,448
Number of Sequences: 2790947
Number of extensions: 7168970
Number of successful extensions: 26072
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 26058
Number of HSP's gapped (non-prelim): 33
length of query: 125
length of database: 848,049,833
effective HSP length: 101
effective length of query: 24
effective length of database: 566,164,186
effective search space: 13587940464
effective search space used: 13587940464
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 67 (30.4 bits)
Lotus: description of TM0035.12