BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0035.10
(150 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q8IYR3 KIAA1935 protein [Homo sapiens] 33 0.98
UniRef100_UPI00004386A2 UPI00004386A2 UniRef100 entry 33 1.7
UniRef100_UPI0000429383 UPI0000429383 UniRef100 entry 33 1.7
UniRef100_Q6RKE4 Polyketide synthase [Cochliobolus heterostrophus] 33 1.7
UniRef100_Q9CH86 Hypothetical protein yihD [Lactococcus lactis] 32 2.2
UniRef100_UPI00003C14B1 UPI00003C14B1 UniRef100 entry 32 2.9
UniRef100_UPI000046B9FC UPI000046B9FC UniRef100 entry 32 3.7
UniRef100_P38809 Hypothetical 40.7 kDa protein in HXT5-NRK1 inte... 32 3.7
UniRef100_UPI000029BB05 UPI000029BB05 UniRef100 entry 31 4.9
UniRef100_UPI000017EB2F UPI000017EB2F UniRef100 entry 31 6.4
UniRef100_UPI000026806A UPI000026806A UniRef100 entry 31 6.4
UniRef100_UPI0000365A4E UPI0000365A4E UniRef100 entry 30 8.3
UniRef100_UPI00003ADF14 UPI00003ADF14 UniRef100 entry 30 8.3
UniRef100_UPI00003ADF13 UPI00003ADF13 UniRef100 entry 30 8.3
UniRef100_UPI000042BE04 UPI000042BE04 UniRef100 entry 30 8.3
UniRef100_UPI0000322545 UPI0000322545 UniRef100 entry 30 8.3
UniRef100_Q9DB28 Mus musculus adult male cerebellum cDNA, RIKEN ... 30 8.3
UniRef100_Q9CSL4 Mus musculus 11 days embryo whole body cDNA, RI... 30 8.3
UniRef100_Q9CSC3 Mus musculus 10, 11 days embryo whole body cDNA... 30 8.3
UniRef100_Q8CGU3 Pinin [Mus musculus] 30 8.3
>UniRef100_Q8IYR3 KIAA1935 protein [Homo sapiens]
Length = 571
Score = 33.5 bits (75), Expect = 0.98
Identities = 27/118 (22%), Positives = 50/118 (41%), Gaps = 2/118 (1%)
Query: 12 KSGNHRPCCSYITLHMQRKLKKKKKNTTQHNDRDSSELRDQVSIHPSSSSFIITMLLGPS 71
K+ +H + + ++ KK+ + +T N + +PSS S + L P
Sbjct: 432 KNMDHAKAREVLKIAKEKAQKKQNETSTSKNAHSKVHFTRRYQ-NPSSGSLPPRVRLKPQ 490
Query: 72 LHQCGWMDGCMPTRNSYDTSGSLS-HADTRATSAKATCLLSWFLLHQSLSRSLTYPQC 128
++ D + T SG ++ +R TS ++ L W LLHQ+++ QC
Sbjct: 491 RYRNEENDSSLKTGLEKMRSGKMAPKPQSRCTSTRSAGLNKWQLLHQTVTSPAAPLQC 548
>UniRef100_UPI00004386A2 UPI00004386A2 UniRef100 entry
Length = 446
Score = 32.7 bits (73), Expect = 1.7
Identities = 26/87 (29%), Positives = 39/87 (43%), Gaps = 3/87 (3%)
Query: 34 KKKNTTQHNDRDSSELRDQVSIHPSSSSFIITMLLGPSLHQCGWMDGCMPTRNSYDT--S 91
K+ +TT+ +D D+ L QVS + + I+ L + Q + D P + T
Sbjct: 68 KRLSTTEPSDDDTMSLHSQVSETARADAHILLTKLDSNKDQDPY-DFIDPNPDEEGTLSE 126
Query: 92 GSLSHADTRATSAKATCLLSWFLLHQS 118
G L H S K C+LS F +H S
Sbjct: 127 GDLQHNAPYVLSIKQCCILSLFFVHFS 153
>UniRef100_UPI0000429383 UPI0000429383 UniRef100 entry
Length = 1006
Score = 32.7 bits (73), Expect = 1.7
Identities = 33/115 (28%), Positives = 48/115 (41%), Gaps = 19/115 (16%)
Query: 25 LHMQRKLKKKKKNTTQHNDRDSSELRDQVSIHPSSSSFIITMLLGPSLHQCGWMDGCMPT 84
LH + L K + Q D+++ S+H S + I T+L SL + GC
Sbjct: 529 LHTPQHLSYSKTSEDQLEDKNTQSFWGLPSLHSESMNSIATVLTDSSL-----ISGCF-- 581
Query: 85 RNSYDTSGSLSHADTRATSAKATCLLSWFLLHQSLSRSLTYP------QCKVQTP 133
N + S L+H T S LS QSLS+S + P Q ++Q P
Sbjct: 582 -NRFSDSPMLTHRTTLPLSESQLHNLS-----QSLSQSQSQPVSQANLQAQLQLP 630
>UniRef100_Q6RKE4 Polyketide synthase [Cochliobolus heterostrophus]
Length = 2275
Score = 32.7 bits (73), Expect = 1.7
Identities = 31/109 (28%), Positives = 46/109 (41%), Gaps = 12/109 (11%)
Query: 43 DRDSSELRDQVSIHPSSSSFIITMLLGPSLHQCGWMDGCMPTRNSY-DTSGSLSHADTRA 101
D + + L+DQ SIH ++ I+ LH+C W + ++SY TS S R
Sbjct: 398 DSNDATLKDQTSIHKNALQSIL-------LHRCEWYNIVSELKSSYFSTSTSFVAFGERC 450
Query: 102 TSAKATCLLSWFLLHQSLSRSLTYPQCKVQTPKKYQVVAVGLEMGSAPS 150
A LLS F + T P +V P V+ V + + A S
Sbjct: 451 MPAS---LLSGFSGRVAYFDDPTTPALRV-NPNDVAVIGVAINVAGASS 495
>UniRef100_Q9CH86 Hypothetical protein yihD [Lactococcus lactis]
Length = 1063
Score = 32.3 bits (72), Expect = 2.2
Identities = 30/97 (30%), Positives = 46/97 (46%), Gaps = 8/97 (8%)
Query: 32 KKKKKNTTQHNDRDSSELRDQVSIHPSSSSFIITMLLGPSLHQCGWMDGCMPTRNSYDTS 91
K ++ N+ S+ L S ++SS +ML P+L Q +G T NS TS
Sbjct: 921 KNSSHSSLSSNESSSASLTSSESSGSTTSS---SMLTNPNL-QSNDKNGSSLTSNSSYTS 976
Query: 92 ----GSLSHADTRATSAKATCLLSWFLLHQSLSRSLT 124
+LSH++ + AK + L+S SLS SL+
Sbjct: 977 EVKLNNLSHSNLSSNEAKVSTLISKVSSSPSLSSSLS 1013
>UniRef100_UPI00003C14B1 UPI00003C14B1 UniRef100 entry
Length = 3023
Score = 32.0 bits (71), Expect = 2.9
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 10/86 (11%)
Query: 24 TLHMQRKLKKKKKNTTQHNDRDSSELRDQV--SIHPSSSSFIITMLLGPSLHQCGWMDGC 81
T H +L +++ + D S+ L D+ + PSS + + + SLH + C
Sbjct: 406 TAHTSSRLTRERDDPDAREDASSTGLGDKFPEAFMPSS----LCLAISTSLHI---LYPC 458
Query: 82 MP-TRNSYDTSGSLSHADTRATSAKA 106
P TR+ +D S+ HAD + SA A
Sbjct: 459 FPPTRSPFDMPPSIDHADLASASAAA 484
>UniRef100_UPI000046B9FC UPI000046B9FC UniRef100 entry
Length = 1838
Score = 31.6 bits (70), Expect = 3.7
Identities = 13/47 (27%), Positives = 30/47 (63%)
Query: 28 QRKLKKKKKNTTQHNDRDSSELRDQVSIHPSSSSFIITMLLGPSLHQ 74
++K KKKKKN Q+ ++++++ D+ S P++ ++ + L P + +
Sbjct: 1036 KKKKKKKKKNYAQNTKQNNADISDETSQLPNNINYFDSNLCFPKIEK 1082
>UniRef100_P38809 Hypothetical 40.7 kDa protein in HXT5-NRK1 intergenic region
[Saccharomyces cerevisiae]
Length = 366
Score = 31.6 bits (70), Expect = 3.7
Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 5/57 (8%)
Query: 35 KKNTTQHNDRDSSELRDQVSIHPSSS-----SFIITMLLGPSLHQCGWMDGCMPTRN 86
++ + H D+D + + + + P + +T L G S H G D C P RN
Sbjct: 104 RRTSHGHRDKDKQKSKSRTKVKPPKNVDTIDKMDVTGLFGGSFHHDGPFDACTPQRN 160
>UniRef100_UPI000029BB05 UPI000029BB05 UniRef100 entry
Length = 1417
Score = 31.2 bits (69), Expect = 4.9
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 45 DSSELRDQVSIHPSSSSFIITMLLGPSLHQCGWMDGCM-PTRNSYDTSGS 93
+ S R + S +P + S ++ GP+LHQ DGC P R+ Y G+
Sbjct: 436 EESPARRRKSPNPKAPSGLVERRHGPALHQQTGRDGCYHPRRDDYSDRGT 485
>UniRef100_UPI000017EB2F UPI000017EB2F UniRef100 entry
Length = 169
Score = 30.8 bits (68), Expect = 6.4
Identities = 13/44 (29%), Positives = 25/44 (56%)
Query: 1 MWRLVPSLTRMKSGNHRPCCSYITLHMQRKLKKKKKNTTQHNDR 44
+W +P +T +++ HR C + TLH+ ++ +K Q+N R
Sbjct: 77 VWSALPFITCLENKGHRYSCFFNTLHVGGTIRTCQKFLIQYNRR 120
>UniRef100_UPI000026806A UPI000026806A UniRef100 entry
Length = 439
Score = 30.8 bits (68), Expect = 6.4
Identities = 11/23 (47%), Positives = 15/23 (64%)
Query: 114 LLHQSLSRSLTYPQCKVQTPKKY 136
+ H+S+ TY QCK+ PKKY
Sbjct: 133 MFHRSIETEFTYQQCKIIFPKKY 155
>UniRef100_UPI0000365A4E UPI0000365A4E UniRef100 entry
Length = 426
Score = 30.4 bits (67), Expect = 8.3
Identities = 13/45 (28%), Positives = 25/45 (54%), Gaps = 2/45 (4%)
Query: 4 LVPSLTRMKSGNHRPCCSYITLHMQRKLKKKKKNTTQHNDRDSSE 48
L+ R + + +PCC+ ++ + R+LK NT HND ++ +
Sbjct: 383 LLSKSRRSAAEHKKPCCTVLSEELSRRLKPNTANT--HNDNENEK 425
>UniRef100_UPI00003ADF14 UPI00003ADF14 UniRef100 entry
Length = 802
Score = 30.4 bits (67), Expect = 8.3
Identities = 20/69 (28%), Positives = 32/69 (45%), Gaps = 7/69 (10%)
Query: 29 RKLKKKKKNTTQHNDRDSSELRD----QVSIHPSSSSFIITMLLGPSLHQCGWMDGCMPT 84
+KL+ +K ++ Q +D+ D VS P+S+ F+ T+L P L P
Sbjct: 701 KKLQPRKPSSYQMSDQSEGSFADAERSSVSSTPNSNLFVATVLQEPEL---SLTPAASPA 757
Query: 85 RNSYDTSGS 93
SY T G+
Sbjct: 758 HQSYGTMGN 766
>UniRef100_UPI00003ADF13 UPI00003ADF13 UniRef100 entry
Length = 812
Score = 30.4 bits (67), Expect = 8.3
Identities = 20/69 (28%), Positives = 32/69 (45%), Gaps = 7/69 (10%)
Query: 29 RKLKKKKKNTTQHNDRDSSELRD----QVSIHPSSSSFIITMLLGPSLHQCGWMDGCMPT 84
+KL+ +K ++ Q +D+ D VS P+S+ F+ T+L P L P
Sbjct: 708 KKLQPRKPSSYQMSDQSEGSFADAERSSVSSTPNSNLFVATVLQEPEL---SLTPAASPA 764
Query: 85 RNSYDTSGS 93
SY T G+
Sbjct: 765 HQSYGTMGN 773
>UniRef100_UPI000042BE04 UPI000042BE04 UniRef100 entry
Length = 430
Score = 30.4 bits (67), Expect = 8.3
Identities = 24/67 (35%), Positives = 35/67 (51%), Gaps = 8/67 (11%)
Query: 37 NTTQHNDRDSSELRDQVSIHPSSSSFIITMLLGPSLHQCGWMDGCMPTRNSYDTSGSLSH 96
++T+ ND DSS R SI P+SS F+ +++ G L G +G NSY +H
Sbjct: 241 SSTKDNDSDSSSARGIKSI-PNSSEFLASLING--LGSGGGGNGSGSNTNSYK-----NH 292
Query: 97 ADTRATS 103
+ T TS
Sbjct: 293 STTSTTS 299
>UniRef100_UPI0000322545 UPI0000322545 UniRef100 entry
Length = 285
Score = 30.4 bits (67), Expect = 8.3
Identities = 11/23 (47%), Positives = 15/23 (64%)
Query: 114 LLHQSLSRSLTYPQCKVQTPKKY 136
+ H+S+ TY QCK+ PKKY
Sbjct: 133 MFHRSIETEFTYRQCKIIFPKKY 155
>UniRef100_Q9DB28 Mus musculus adult male cerebellum cDNA, RIKEN full-length enriched
library, clone:1500019J17 product:ribonuclease P protein
3, full insert sequence [Mus musculus]
Length = 169
Score = 30.4 bits (67), Expect = 8.3
Identities = 13/44 (29%), Positives = 25/44 (56%)
Query: 1 MWRLVPSLTRMKSGNHRPCCSYITLHMQRKLKKKKKNTTQHNDR 44
+W +P +T +++ HR C + TLH+ ++ +K Q+N R
Sbjct: 77 VWSALPFITYLENKGHRYPCFFNTLHVGGTIRTCQKFLIQYNRR 120
>UniRef100_Q9CSL4 Mus musculus 11 days embryo whole body cDNA, RIKEN full-length
enriched library, clone:2700077E03 product:ribonuclease
P protein 3, full insert sequence [Mus musculus]
Length = 175
Score = 30.4 bits (67), Expect = 8.3
Identities = 13/44 (29%), Positives = 25/44 (56%)
Query: 1 MWRLVPSLTRMKSGNHRPCCSYITLHMQRKLKKKKKNTTQHNDR 44
+W +P +T +++ HR C + TLH+ ++ +K Q+N R
Sbjct: 83 VWSALPFITYLENKGHRYPCFFNTLHVGGTIRTCQKFLIQYNRR 126
>UniRef100_Q9CSC3 Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length
enriched library, clone:2810436P08 product:ribonuclease
P protein 3, full insert sequence [Mus musculus]
Length = 168
Score = 30.4 bits (67), Expect = 8.3
Identities = 13/44 (29%), Positives = 25/44 (56%)
Query: 1 MWRLVPSLTRMKSGNHRPCCSYITLHMQRKLKKKKKNTTQHNDR 44
+W +P +T +++ HR C + TLH+ ++ +K Q+N R
Sbjct: 76 VWSALPFITYLENKGHRYPCFFNTLHVGGTIRTCQKFLIQYNRR 119
>UniRef100_Q8CGU3 Pinin [Mus musculus]
Length = 725
Score = 30.4 bits (67), Expect = 8.3
Identities = 22/84 (26%), Positives = 37/84 (43%)
Query: 23 ITLHMQRKLKKKKKNTTQHNDRDSSELRDQVSIHPSSSSFIITMLLGPSLHQCGWMDGCM 82
+T+H + K K K ++ ++ R+ + S SSSS T S G
Sbjct: 554 LTVHSENKSKNKTRSRSRGRARNKTSKSRSRSSSSSSSSSSSTSSSSGSSSSSGSSSSRS 613
Query: 83 PTRNSYDTSGSLSHADTRATSAKA 106
+ +S TSGS S + +TS+ +
Sbjct: 614 SSSSSSSTSGSSSRDSSSSTSSSS 637
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.318 0.128 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 244,654,422
Number of Sequences: 2790947
Number of extensions: 8513996
Number of successful extensions: 21672
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 21657
Number of HSP's gapped (non-prelim): 28
length of query: 150
length of database: 848,049,833
effective HSP length: 126
effective length of query: 24
effective length of database: 496,390,511
effective search space: 11913372264
effective search space used: 11913372264
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 67 (30.4 bits)
Lotus: description of TM0035.10