BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0032.10
         (216 letters)

Database: uniref100 
           2,790,947 sequences; 848,049,833 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

UniRef100_UPI0000468694 UPI0000468694 UniRef100 entry                  35  1.8
UniRef100_Q9LP05 F9C16.13 [Arabidopsis thaliana]                       34  3.0
UniRef100_Q9LP00 F9C16.18 [Arabidopsis thaliana]                       34  3.0
UniRef100_P31903 Hydrogenase expression/formation protein hypD [...    33  6.7

>UniRef100_UPI0000468694 UPI0000468694 UniRef100 entry
          Length = 755

 Score = 34.7 bits (78), Expect = 1.8
 Identities = 23/66 (34%), Positives = 34/66 (50%), Gaps = 4/66 (6%)

Query: 104 STAVEIVIGLEIPQVIIVCDSLDVIRLIIDP--VKFVKSE--KALYEKNFARTVKVRPKR 159
           S  VE V  L    + I+ D LD +R + +P  +KF+ SE  K  YE NF +T  + P  
Sbjct: 451 SLYVESVKYLHFHILKIIIDELDELRKVHEPQYIKFILSESYKKNYESNFYKTSNIHPSM 510

Query: 160 TWKVRP 165
              ++P
Sbjct: 511 NEYIQP 516


>UniRef100_Q9LP05 F9C16.13 [Arabidopsis thaliana]
          Length = 1172

 Score = 33.9 bits (76), Expect = 3.0
 Identities = 13/21 (61%), Positives = 17/21 (80%)

Query: 70  GVLRDAMGQWIKGFSINMGSR 90
           GVLRD  G+W+ GFS+N+G R
Sbjct: 233 GVLRDREGEWLGGFSLNIGRR 253


>UniRef100_Q9LP00 F9C16.18 [Arabidopsis thaliana]
          Length = 196

 Score = 33.9 bits (76), Expect = 3.0
 Identities = 13/21 (61%), Positives = 17/21 (80%)

Query: 70  GVLRDAMGQWIKGFSINMGSR 90
           GVLRD  G+W+ GFS+N+G R
Sbjct: 85  GVLRDREGEWLGGFSLNIGRR 105


>UniRef100_P31903 Hydrogenase expression/formation protein hypD [Alcaligenes
           eutrophus]
          Length = 379

 Score = 32.7 bits (73), Expect = 6.7
 Identities = 30/104 (28%), Positives = 45/104 (42%), Gaps = 15/104 (14%)

Query: 116 PQVIIVCDSLDVIRLIIDPVKFVKSEKALYEKNFARTV--------KVRPKRTWKVRPSR 167
           P VI   + LDV++ I+  V+ V S +A  E  F R V        +      +++RPS 
Sbjct: 223 PVVIAGFEPLDVMQAILMLVRQVNSGRAEVENEFVRAVTRDGNESAQAMVSEVFELRPSF 282

Query: 168 TWKNLQIPTPYSSRFTIRSGAVWKIGQFF------IPDAKSTNC 205
            W+ L    PYS+       A +   Q F      +PD K+  C
Sbjct: 283 EWRGLG-EVPYSALRIRAQFARFDAEQRFDLRYRPVPDNKACEC 325


  Database: uniref100
    Posted date:  Jan 5, 2005  1:24 AM
  Number of letters in database: 848,049,833
  Number of sequences in database:  2,790,947
  
Lambda     K      H
   0.322    0.136    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 339,596,374
Number of Sequences: 2790947
Number of extensions: 12892643
Number of successful extensions: 29207
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 29205
Number of HSP's gapped (non-prelim): 4
length of query: 216
length of database: 848,049,833
effective HSP length: 122
effective length of query: 94
effective length of database: 507,554,299
effective search space: 47710104106
effective search space used: 47710104106
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 72 (32.3 bits)