BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0030.2
(82 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_P35687 40S ribosomal protein S21 [Oryza sativa] 146 1e-34
UniRef100_Q7Y199 40S subunit ribosomal protein [Oryza sativa] 145 3e-34
UniRef100_Q9M337 40S ribosomal protein S21-2 [Arabidopsis thaliana] 144 4e-34
UniRef100_Q8LCB7 40S ribosomal protein S21 homolog [Arabidopsis ... 142 2e-33
UniRef100_Q41852 40S ribosomal protein S21 [Zea mays] 140 6e-33
UniRef100_Q60DM0 40S ribosomal protein S21, putative [Oryza sativa] 139 2e-32
UniRef100_P93626 40S ribosomal subunit protein S21 [Zea mays] 134 6e-31
UniRef100_Q9SMI2 40S ribosomal protein S21 [Cyanophora paradoxa] 107 7e-23
UniRef100_UPI000023463C UPI000023463C UniRef100 entry 106 2e-22
UniRef100_Q75BL6 ACR255Cp [Ashbya gossypii] 100 1e-20
UniRef100_Q6CXT6 Kluyveromyces lactis strain NRRL Y-1140 chromos... 99 2e-20
UniRef100_Q90YQ2 40S ribosomal protein S21 [Ictalurus punctatus] 95 4e-19
UniRef100_Q7ZUG5 Similar to ribosomal protein S21 [Brachydanio r... 95 5e-19
UniRef100_UPI000021A6BD UPI000021A6BD UniRef100 entry 94 6e-19
UniRef100_P05760 40S ribosomal protein S21 [Saccharomyces cerevi... 94 6e-19
UniRef100_Q86CT3 Ribosomal protein S21 [Branchiostoma belcheri t... 94 8e-19
UniRef100_Q9P844 40S ribosomal protein S21 [Candida albicans] 94 8e-19
UniRef100_UPI00003AC233 UPI00003AC233 UniRef100 entry 93 1e-18
UniRef100_P05765 40S ribosomal protein S21 [Rattus norvegicus] 93 1e-18
UniRef100_P63220 40S ribosomal protein S21 [Homo sapiens] 93 1e-18
>UniRef100_P35687 40S ribosomal protein S21 [Oryza sativa]
Length = 82
Score = 146 bits (369), Expect = 1e-34
Identities = 65/82 (79%), Positives = 80/82 (97%)
Query: 1 MQNEEGQITELYIPRKCSATNRLITAKDHASVQINIGHLDESGVYNGQFSTYALCGYIRA 60
MQNEEGQ+ +LY+PRKCSATNR+ITAKDHASVQINIGH+DE+G+Y+G+F+T+AL G+IRA
Sbjct: 1 MQNEEGQMVDLYVPRKCSATNRIITAKDHASVQINIGHVDENGLYDGRFTTFALSGFIRA 60
Query: 61 QGDADSAIDRLWQKKKAEIKQQ 82
QGDADSA+DRLWQK+KAE+KQQ
Sbjct: 61 QGDADSALDRLWQKRKAEVKQQ 82
>UniRef100_Q7Y199 40S subunit ribosomal protein [Oryza sativa]
Length = 82
Score = 145 bits (365), Expect = 3e-34
Identities = 64/82 (78%), Positives = 79/82 (96%)
Query: 1 MQNEEGQITELYIPRKCSATNRLITAKDHASVQINIGHLDESGVYNGQFSTYALCGYIRA 60
MQNEEGQ+ +LY+PRKCS TNR+ITAKDHASVQINIGH+DE+G+Y+G+F+T+AL G+IRA
Sbjct: 1 MQNEEGQMVDLYVPRKCSTTNRIITAKDHASVQINIGHVDENGLYDGRFTTFALSGFIRA 60
Query: 61 QGDADSAIDRLWQKKKAEIKQQ 82
QGDADSA+DRLWQK+KAE+KQQ
Sbjct: 61 QGDADSALDRLWQKRKAEVKQQ 82
>UniRef100_Q9M337 40S ribosomal protein S21-2 [Arabidopsis thaliana]
Length = 82
Score = 144 bits (364), Expect = 4e-34
Identities = 63/82 (76%), Positives = 76/82 (91%)
Query: 1 MQNEEGQITELYIPRKCSATNRLITAKDHASVQINIGHLDESGVYNGQFSTYALCGYIRA 60
M+N+ GQ+TELYIPRKCSATNR+IT+KDHASVQ+NIGHLD +G+Y GQF+T+ALCG++RA
Sbjct: 1 MENDAGQVTELYIPRKCSATNRMITSKDHASVQLNIGHLDANGLYTGQFTTFALCGFVRA 60
Query: 61 QGDADSAIDRLWQKKKAEIKQQ 82
QGDADS +DRLWQKKK E KQQ
Sbjct: 61 QGDADSGVDRLWQKKKVEAKQQ 82
>UniRef100_Q8LCB7 40S ribosomal protein S21 homolog [Arabidopsis thaliana]
Length = 82
Score = 142 bits (358), Expect = 2e-33
Identities = 62/82 (75%), Positives = 75/82 (90%)
Query: 1 MQNEEGQITELYIPRKCSATNRLITAKDHASVQINIGHLDESGVYNGQFSTYALCGYIRA 60
M+N+ GQ+TELYIP KCSATNR+IT+KDHASVQ+NIGHLD +G+Y GQF+T+ALCG++RA
Sbjct: 1 MENDAGQVTELYIPSKCSATNRMITSKDHASVQLNIGHLDANGLYTGQFTTFALCGFVRA 60
Query: 61 QGDADSAIDRLWQKKKAEIKQQ 82
QGDADS +DRLWQKKK E KQQ
Sbjct: 61 QGDADSGVDRLWQKKKVEAKQQ 82
>UniRef100_Q41852 40S ribosomal protein S21 [Zea mays]
Length = 81
Score = 140 bits (354), Expect = 6e-33
Identities = 63/81 (77%), Positives = 76/81 (93%)
Query: 1 MQNEEGQITELYIPRKCSATNRLITAKDHASVQINIGHLDESGVYNGQFSTYALCGYIRA 60
MQNEEG+ +LY+PRKCSATNR+ITAKDHASVQINIGHLD +G+Y+G F+T+AL G++RA
Sbjct: 1 MQNEEGKTVDLYVPRKCSATNRIITAKDHASVQINIGHLDANGLYDGHFTTFALSGFVRA 60
Query: 61 QGDADSAIDRLWQKKKAEIKQ 81
QGDADS++DRLWQKKKAEIKQ
Sbjct: 61 QGDADSSLDRLWQKKKAEIKQ 81
>UniRef100_Q60DM0 40S ribosomal protein S21, putative [Oryza sativa]
Length = 119
Score = 139 bits (349), Expect = 2e-32
Identities = 61/79 (77%), Positives = 76/79 (95%)
Query: 1 MQNEEGQITELYIPRKCSATNRLITAKDHASVQINIGHLDESGVYNGQFSTYALCGYIRA 60
MQNEEGQ+ +LY+PRKCS TNR+ITAKDHASVQINIGH+DE+G+Y+G+F+T+AL G+IRA
Sbjct: 1 MQNEEGQMVDLYVPRKCSTTNRIITAKDHASVQINIGHVDENGLYDGRFTTFALSGFIRA 60
Query: 61 QGDADSAIDRLWQKKKAEI 79
QGDADSA+DRLWQK+KAE+
Sbjct: 61 QGDADSALDRLWQKRKAEL 79
>UniRef100_P93626 40S ribosomal subunit protein S21 [Zea mays]
Length = 81
Score = 134 bits (337), Expect = 6e-31
Identities = 61/81 (75%), Positives = 75/81 (92%)
Query: 1 MQNEEGQITELYIPRKCSATNRLITAKDHASVQINIGHLDESGVYNGQFSTYALCGYIRA 60
MQNEEG+ +LY+PRKCSATNR+ITAKDHASVQINIGHLD +G+Y+G F+T+AL G++RA
Sbjct: 1 MQNEEGKTVDLYVPRKCSATNRIITAKDHASVQINIGHLDANGLYDGHFTTFALSGFVRA 60
Query: 61 QGDADSAIDRLWQKKKAEIKQ 81
QGDADS++DRL QKKKA+IKQ
Sbjct: 61 QGDADSSLDRLRQKKKADIKQ 81
>UniRef100_Q9SMI2 40S ribosomal protein S21 [Cyanophora paradoxa]
Length = 82
Score = 107 bits (267), Expect = 7e-23
Identities = 47/75 (62%), Positives = 66/75 (87%), Gaps = 1/75 (1%)
Query: 1 MQNEEGQITELYIPRKCSATNRLITAKDHASVQINIGHLD-ESGVYNGQFSTYALCGYIR 59
MQN+EG+I +LYIPRKCSATNRLI+A DHA+VQIN+GH+D SG+Y G ++T+ALCG++R
Sbjct: 1 MQNDEGKIVDLYIPRKCSATNRLISATDHAAVQINVGHVDPNSGLYTGDYTTFALCGFVR 60
Query: 60 AQGDADSAIDRLWQK 74
+ G++D+A++RL K
Sbjct: 61 SMGESDAALNRLCVK 75
>UniRef100_UPI000023463C UPI000023463C UniRef100 entry
Length = 88
Score = 106 bits (264), Expect = 2e-22
Identities = 46/74 (62%), Positives = 64/74 (86%)
Query: 1 MQNEEGQITELYIPRKCSATNRLITAKDHASVQINIGHLDESGVYNGQFSTYALCGYIRA 60
M+NE+G+I +LY+PRKCSATNR+I A DHASVQI+IG +DE+G Y G+ TYALCG+IRA
Sbjct: 1 MENEKGEIVDLYVPRKCSATNRIIKANDHASVQISIGKVDENGRYTGENQTYALCGFIRA 60
Query: 61 QGDADSAIDRLWQK 74
+G++D +++RL Q+
Sbjct: 61 RGESDDSLNRLTQR 74
>UniRef100_Q75BL6 ACR255Cp [Ashbya gossypii]
Length = 87
Score = 100 bits (248), Expect = 1e-20
Identities = 46/75 (61%), Positives = 62/75 (82%), Gaps = 1/75 (1%)
Query: 1 MQNEEGQITELYIPRKCSATNRLITAKDHASVQINIGHLDESG-VYNGQFSTYALCGYIR 59
M+N++GQ+ ELY+PRKCSATNR+I AKDH SVQINI +DE+G G++ TYAL GY+R
Sbjct: 1 MENDKGQLVELYVPRKCSATNRIIKAKDHGSVQINIAQVDENGHAVPGEYITYALSGYVR 60
Query: 60 AQGDADSAIDRLWQK 74
A+G+AD +++RL QK
Sbjct: 61 ARGEADDSMNRLAQK 75
>UniRef100_Q6CXT6 Kluyveromyces lactis strain NRRL Y-1140 chromosome A of strain
NRRL Y- 1140 of Kluyveromyces lactis [Kluyveromyces
lactis]
Length = 87
Score = 99.4 bits (246), Expect = 2e-20
Identities = 46/75 (61%), Positives = 62/75 (82%), Gaps = 1/75 (1%)
Query: 1 MQNEEGQITELYIPRKCSATNRLITAKDHASVQINIGHLDESG-VYNGQFSTYALCGYIR 59
M+N++GQ+ ELY+PRKCSATNR+I AKDH+SVQINI +DE G G++ TYAL GYIR
Sbjct: 1 MENDKGQLVELYVPRKCSATNRIIKAKDHSSVQINIAQVDEEGRAIPGEYVTYALSGYIR 60
Query: 60 AQGDADSAIDRLWQK 74
A+G+AD +++RL Q+
Sbjct: 61 ARGEADDSLNRLAQQ 75
>UniRef100_Q90YQ2 40S ribosomal protein S21 [Ictalurus punctatus]
Length = 83
Score = 95.1 bits (235), Expect = 4e-19
Identities = 43/72 (59%), Positives = 58/72 (79%), Gaps = 1/72 (1%)
Query: 1 MQNEEGQITELYIPRKCSATNRLITAKDHASVQINIGHLDE-SGVYNGQFSTYALCGYIR 59
MQN+ G+ +LY+PRKCSA+NR+I AKDHAS+QINI +D+ +G +NGQF TYA+CG IR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQINIAEVDKVTGRFNGQFKTYAICGAIR 60
Query: 60 AQGDADSAIDRL 71
G+AD ++ RL
Sbjct: 61 RMGEADDSLLRL 72
>UniRef100_Q7ZUG5 Similar to ribosomal protein S21 [Brachydanio rerio]
Length = 81
Score = 94.7 bits (234), Expect = 5e-19
Identities = 43/72 (59%), Positives = 57/72 (78%), Gaps = 1/72 (1%)
Query: 1 MQNEEGQITELYIPRKCSATNRLITAKDHASVQINIGHLDE-SGVYNGQFSTYALCGYIR 59
MQN+ G+ +LY+PRKCSA+NR+I AKDHAS+QINI +D +G +NGQF TYA+CG IR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQINIAEVDRVTGRFNGQFKTYAICGAIR 60
Query: 60 AQGDADSAIDRL 71
G+AD ++ RL
Sbjct: 61 RMGEADDSLLRL 72
>UniRef100_UPI000021A6BD UPI000021A6BD UniRef100 entry
Length = 87
Score = 94.4 bits (233), Expect = 6e-19
Identities = 42/75 (56%), Positives = 60/75 (80%), Gaps = 1/75 (1%)
Query: 1 MQNEEGQITELYIPRKCSATNRLITAKDHASVQINIGHLDESG-VYNGQFSTYALCGYIR 59
M+N++G+I +LY+PRKCSATNR+I A+DHASVQI+I +DE+G G+ YALCG++R
Sbjct: 1 MENDKGEIVDLYVPRKCSATNRIIKAQDHASVQISIAKVDENGRAVQGENHVYALCGFVR 60
Query: 60 AQGDADSAIDRLWQK 74
A G+ D A++RL Q+
Sbjct: 61 AMGEGDDALNRLTQR 75
>UniRef100_P05760 40S ribosomal protein S21 [Saccharomyces cerevisiae]
Length = 87
Score = 94.4 bits (233), Expect = 6e-19
Identities = 42/74 (56%), Positives = 60/74 (80%), Gaps = 1/74 (1%)
Query: 1 MQNEEGQITELYIPRKCSATNRLITAKDHASVQINIGHLDESG-VYNGQFSTYALCGYIR 59
M+N++GQ+ ELY+PRKCSATNR+I A DHASVQIN+ +DE G G++ TYAL GY+R
Sbjct: 1 MENDKGQLVELYVPRKCSATNRIIKADDHASVQINVAKVDEEGRAIPGEYVTYALSGYVR 60
Query: 60 AQGDADSAIDRLWQ 73
++G++D +++RL Q
Sbjct: 61 SRGESDDSLNRLAQ 74
>UniRef100_Q86CT3 Ribosomal protein S21 [Branchiostoma belcheri tsingtaunese]
Length = 85
Score = 94.0 bits (232), Expect = 8e-19
Identities = 43/77 (55%), Positives = 57/77 (73%), Gaps = 1/77 (1%)
Query: 1 MQNEEGQITELYIPRKCSATNRLITAKDHASVQINIGHLD-ESGVYNGQFSTYALCGYIR 59
MQN+ G++ +LYIPRKCS+TNR+I AKDHAS+QIN +D +G GQ+ TYA+CGYIR
Sbjct: 1 MQNDAGEVVDLYIPRKCSSTNRIIGAKDHASIQINFAEVDPTTGRMTGQYKTYAICGYIR 60
Query: 60 AQGDADSAIDRLWQKKK 76
G++D + RL K K
Sbjct: 61 QMGESDDCLKRLAIKDK 77
>UniRef100_Q9P844 40S ribosomal protein S21 [Candida albicans]
Length = 87
Score = 94.0 bits (232), Expect = 8e-19
Identities = 44/75 (58%), Positives = 60/75 (79%), Gaps = 1/75 (1%)
Query: 1 MQNEEGQITELYIPRKCSATNRLITAKDHASVQINIGHLDESG-VYNGQFSTYALCGYIR 59
M+N++GQ+ ELY+PRKCSATNR+I AKDHASVQI+I +DE G G+ TYAL GY+R
Sbjct: 1 MENDKGQLVELYVPRKCSATNRIIKAKDHASVQISIAKVDEDGRAIAGENITYALSGYVR 60
Query: 60 AQGDADSAIDRLWQK 74
+G+AD +++RL Q+
Sbjct: 61 GRGEADDSLNRLAQQ 75
>UniRef100_UPI00003AC233 UPI00003AC233 UniRef100 entry
Length = 104
Score = 93.2 bits (230), Expect = 1e-18
Identities = 43/72 (59%), Positives = 57/72 (78%), Gaps = 1/72 (1%)
Query: 1 MQNEEGQITELYIPRKCSATNRLITAKDHASVQINIGHLDE-SGVYNGQFSTYALCGYIR 59
MQN+ G+ +LY+PRKCSA+NR+I AKDHAS+QINI +D+ +G NGQF TYA+CG IR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQINISEVDKVTGRVNGQFKTYAICGAIR 60
Query: 60 AQGDADSAIDRL 71
G++D +I RL
Sbjct: 61 RMGESDDSILRL 72
>UniRef100_P05765 40S ribosomal protein S21 [Rattus norvegicus]
Length = 83
Score = 93.2 bits (230), Expect = 1e-18
Identities = 41/72 (56%), Positives = 56/72 (76%), Gaps = 1/72 (1%)
Query: 1 MQNEEGQITELYIPRKCSATNRLITAKDHASVQINIGHLDES-GVYNGQFSTYALCGYIR 59
MQN+ G+ +LY+PRKCSA+NR+I AKDHAS+Q+N+ +D S G +NGQF TY +CG IR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIAAKDHASIQMNVAEVDRSTGRFNGQFKTYGICGAIR 60
Query: 60 AQGDADSAIDRL 71
G++D +I RL
Sbjct: 61 RMGESDDSILRL 72
>UniRef100_P63220 40S ribosomal protein S21 [Homo sapiens]
Length = 83
Score = 93.2 bits (230), Expect = 1e-18
Identities = 41/72 (56%), Positives = 58/72 (79%), Gaps = 1/72 (1%)
Query: 1 MQNEEGQITELYIPRKCSATNRLITAKDHASVQINIGHLDE-SGVYNGQFSTYALCGYIR 59
MQN+ G+ +LY+PRKCSA+NR+I AKDHAS+Q+N+ +D+ +G +NGQF TYA+CG IR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIR 60
Query: 60 AQGDADSAIDRL 71
G++D +I RL
Sbjct: 61 RMGESDDSILRL 72
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.315 0.131 0.379
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 131,789,304
Number of Sequences: 2790947
Number of extensions: 4305577
Number of successful extensions: 7772
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 7667
Number of HSP's gapped (non-prelim): 68
length of query: 82
length of database: 848,049,833
effective HSP length: 58
effective length of query: 24
effective length of database: 686,174,907
effective search space: 16468197768
effective search space used: 16468197768
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 68 (30.8 bits)
Lotus: description of TM0030.2