BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0030.13
(117 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q9M2N4 Hypothetical protein T27B3.50 [Arabidopsis thal... 153 8e-37
UniRef100_Q94AA9 AT5g33290/F19N2_10 [Arabidopsis thaliana] 147 7e-35
UniRef100_Q9LFP3 Hypothetical protein F2I11_20 [Arabidopsis thal... 143 1e-33
UniRef100_Q6K621 Exostosin-like protein [Oryza sativa] 130 9e-30
UniRef100_Q9FFN2 Similarity to limonene cyclase [Arabidopsis tha... 127 6e-29
UniRef100_Q6Z4E7 Putative pectin-glucuronyltransferase [Oryza sa... 119 1e-26
UniRef100_Q6Z4E5 Limonene cyclase like protein [Oryza sativa] 119 1e-26
UniRef100_Q7XSW2 OSJNBa0027H06.12 protein [Oryza sativa] 117 5e-26
UniRef100_Q658E4 Putative pectin-glucuronyltransferase [Oryza sa... 113 1e-24
UniRef100_Q9SSE8 MLP3.7 protein [Arabidopsis thaliana] 108 3e-23
UniRef100_Q8LD60 Hypothetical protein [Arabidopsis thaliana] 99 2e-20
UniRef100_Q8RXU2 Hypothetical protein At4g16745 [Arabidopsis tha... 99 3e-20
UniRef100_O65522 Hypothetical protein F4D11.10 [Arabidopsis thal... 98 5e-20
UniRef100_Q5VNX0 Pectin-glucuronyltransferase-like [Oryza sativa] 97 1e-19
UniRef100_Q657X7 Pectin-glucuronyltransferase-like [Oryza sativa] 92 4e-18
UniRef100_Q9FGV3 Similarity to limonene cyclase [Arabidopsis tha... 88 4e-17
UniRef100_Q9LYD1 Hypothetical protein F15N18_200 [Arabidopsis th... 86 2e-16
UniRef100_Q8GYD4 Hypothetical protein At5g11610/F15N18_200 [Arab... 86 2e-16
UniRef100_Q9SZK4 Hypothetical protein F20D10.160 [Arabidopsis th... 80 8e-15
UniRef100_Q6ZIF8 Putative pectin-glucuronyltransferase [Oryza sa... 77 7e-14
>UniRef100_Q9M2N4 Hypothetical protein T27B3.50 [Arabidopsis thaliana]
Length = 340
Score = 153 bits (387), Expect = 8e-37
Identities = 68/119 (57%), Positives = 88/119 (73%), Gaps = 3/119 (2%)
Query: 2 VKRLKVWVYEEGEQPLVHDGPLKGLYSIEGQFMDEIDSCRKSP---FKARHPDEANLFLI 58
+K KVW Y+EGEQPLVHDGP+ +Y IEGQF+DE+ P F+A P+EA+ F +
Sbjct: 1 MKTFKVWSYKEGEQPLVHDGPVNDIYGIEGQFIDELSYVMGGPSGRFRASRPEEAHAFFL 60
Query: 59 PFSISNIVQYVYMPILSQQDYHLGRLQRLVEDYVHVVADKYPYWNRSNGADHFLLSCHD 117
PFS++NIV YVY PI S D++ RL R+ DYV VVA K+P+WN+SNGADHF++SCHD
Sbjct: 61 PFSVANIVHYVYQPITSPADFNRARLHRIFNDYVDVVAHKHPFWNQSNGADHFMVSCHD 119
>UniRef100_Q94AA9 AT5g33290/F19N2_10 [Arabidopsis thaliana]
Length = 341
Score = 147 bits (370), Expect = 7e-35
Identities = 66/120 (55%), Positives = 87/120 (72%), Gaps = 3/120 (2%)
Query: 1 MVKRLKVWVYEEGEQPLVHDGPLKGLYSIEGQFMDE--IDSCR-KSPFKARHPDEANLFL 57
M+ R KVW Y EGE PL HDGP+ +Y IEGQFMDE +D + +S F+A P+ A++F
Sbjct: 1 MMNRFKVWTYTEGEVPLFHDGPVNDIYGIEGQFMDEMCVDGPKSRSRFRADRPENAHVFF 60
Query: 58 IPFSISNIVQYVYMPILSQQDYHLGRLQRLVEDYVHVVADKYPYWNRSNGADHFLLSCHD 117
IPFS++ ++ +VY PI S + + RL RL+EDYV VVA K+PYWNRS G DHF++SCHD
Sbjct: 61 IPFSVAKVIHFVYKPITSVEGFSRARLHRLIEDYVDVVATKHPYWNRSQGGDHFMVSCHD 120
>UniRef100_Q9LFP3 Hypothetical protein F2I11_20 [Arabidopsis thaliana]
Length = 336
Score = 143 bits (360), Expect = 1e-33
Identities = 66/117 (56%), Positives = 84/117 (71%), Gaps = 4/117 (3%)
Query: 1 MVKRLKVWVYEEGEQPLVHDGPLKGLYSIEGQFMDEIDSCRKSPFKARHPDEANLFLIPF 60
M KR K+W Y EGE PL H GPL +Y+IEGQFMDEI++ S FKA P+EA +F IP
Sbjct: 1 MEKRFKIWTYREGEAPLFHKGPLNNIYAIEGQFMDEIEN-GNSRFKAASPEEATVFYIPV 59
Query: 61 SISNIVQYVYMPILSQQDYHLGRLQRLVEDYVHVVADKYPYWNRSNGADHFLLSCHD 117
I NI+++VY P S Y RLQ +V+DY+ +++++YPYWNRS GADHF LSCHD
Sbjct: 60 GIVNIIRFVYRPYTS---YARDRLQNIVKDYISLISNRYPYWNRSRGADHFFLSCHD 113
>UniRef100_Q6K621 Exostosin-like protein [Oryza sativa]
Length = 345
Score = 130 bits (326), Expect = 9e-30
Identities = 64/117 (54%), Positives = 80/117 (67%), Gaps = 4/117 (3%)
Query: 1 MVKRLKVWVYEEGEQPLVHDGPLKGLYSIEGQFMDEIDSCRKSPFKARHPDEANLFLIPF 60
M +R K+W Y EGE P+ H GP +YSIEGQFM E+D R S F AR PD+A+ FL+P
Sbjct: 1 MERRFKIWTYREGEPPVAHIGPGTDIYSIEGQFMYEMDDPR-SRFAARRPDDAHAFLLPI 59
Query: 61 SISNIVQYVYMPILSQQDYHLGRLQRLVEDYVHVVADKYPYWNRSNGADHFLLSCHD 117
S+ N+V YVY + L L+ LV DYV VVA++YPYWNRS GADH ++SCHD
Sbjct: 60 SVCNLVHYVYRLNATGD---LAPLRGLVADYVRVVAERYPYWNRSRGADHVIVSCHD 113
>UniRef100_Q9FFN2 Similarity to limonene cyclase [Arabidopsis thaliana]
Length = 408
Score = 127 bits (319), Expect = 6e-29
Identities = 57/117 (48%), Positives = 84/117 (71%), Gaps = 6/117 (5%)
Query: 1 MVKRLKVWVYEEGEQPLVHDGPLKGLYSIEGQFMDEIDSCRKSPFKARHPDEANLFLIPF 60
M K+ K++VY+EGE PL HDGP K +YS+EG F+ EI++ + F+ +PD+A++F +PF
Sbjct: 76 MEKQFKIYVYKEGEPPLFHDGPCKSIYSMEGSFIYEIETDTR--FRTNNPDKAHVFYLPF 133
Query: 61 SISNIVQYVYMPILSQQDYHLGRLQRLVEDYVHVVADKYPYWNRSNGADHFLLSCHD 117
S+ +V+YVY + ++ V+DY+++V DKYPYWNRS GADHF+LSCHD
Sbjct: 134 SVVKMVRYVY----ERNSRDFSPIRNTVKDYINLVGDKYPYWNRSIGADHFILSCHD 186
>UniRef100_Q6Z4E7 Putative pectin-glucuronyltransferase [Oryza sativa]
Length = 606
Score = 119 bits (299), Expect = 1e-26
Identities = 54/117 (46%), Positives = 82/117 (69%), Gaps = 6/117 (5%)
Query: 1 MVKRLKVWVYEEGEQPLVHDGPLKGLYSIEGQFMDEIDSCRKSPFKARHPDEANLFLIPF 60
M K KV+VYEEGE P+ HDGP + +YS EG+F+ ++ ++ + R PD+A++F +PF
Sbjct: 268 MEKVFKVFVYEEGEPPVFHDGPCRSIYSTEGRFIYAMEM--ENRMRTRDPDQAHVFFLPF 325
Query: 61 SISNIVQYVYMPILSQQDYHLGRLQRLVEDYVHVVADKYPYWNRSNGADHFLLSCHD 117
S+ +V+ +Y P + + L+R + DY++VV+ KYP+WNRS GADHF+LSCHD
Sbjct: 326 SVVKMVKMIYEP----NSHDMDPLRRTISDYINVVSTKYPHWNRSLGADHFMLSCHD 378
>UniRef100_Q6Z4E5 Limonene cyclase like protein [Oryza sativa]
Length = 417
Score = 119 bits (299), Expect = 1e-26
Identities = 54/117 (46%), Positives = 82/117 (69%), Gaps = 6/117 (5%)
Query: 1 MVKRLKVWVYEEGEQPLVHDGPLKGLYSIEGQFMDEIDSCRKSPFKARHPDEANLFLIPF 60
M K KV+VYEEGE P+ HDGP + +YS EG+F+ ++ ++ + R PD+A++F +PF
Sbjct: 268 MEKVFKVFVYEEGEPPVFHDGPCRSIYSTEGRFIYAMEM--ENRMRTRDPDQAHVFFLPF 325
Query: 61 SISNIVQYVYMPILSQQDYHLGRLQRLVEDYVHVVADKYPYWNRSNGADHFLLSCHD 117
S+ +V+ +Y P + + L+R + DY++VV+ KYP+WNRS GADHF+LSCHD
Sbjct: 326 SVVKMVKMIYEP----NSHDMDPLRRTISDYINVVSTKYPHWNRSLGADHFMLSCHD 378
>UniRef100_Q7XSW2 OSJNBa0027H06.12 protein [Oryza sativa]
Length = 441
Score = 117 bits (294), Expect = 5e-26
Identities = 57/121 (47%), Positives = 82/121 (67%), Gaps = 8/121 (6%)
Query: 1 MVKRLKVWVYEEGEQPLVHDGPLKGLYSIEGQFMDEIDSCRKSP----FKARHPDEANLF 56
M +R KV+VYEEGE P++H+GP K +Y+IEG F+++++ S + P A+ F
Sbjct: 100 MERRFKVYVYEEGEPPILHEGPCKNIYTIEGSFIEQLELMSPSDAGGGVRTWDPTRAHAF 159
Query: 57 LIPFSISNIVQYVYMPILSQQDYHLGRLQRLVEDYVHVVADKYPYWNRSNGADHFLLSCH 116
+PFS+S +V++VY P QD L+ +V DYV VVA ++P+WNRS GADHF+LSCH
Sbjct: 160 FLPFSVSQMVKFVYRP--PSQDR--APLRAIVADYVRVVAARHPFWNRSAGADHFMLSCH 215
Query: 117 D 117
D
Sbjct: 216 D 216
>UniRef100_Q658E4 Putative pectin-glucuronyltransferase [Oryza sativa]
Length = 514
Score = 113 bits (282), Expect = 1e-24
Identities = 54/119 (45%), Positives = 77/119 (64%), Gaps = 6/119 (5%)
Query: 1 MVKRLKVWVYEEGEQPLVHDGPLKGLYSIEGQFMDEIDSCRKSPFKAR--HPDEANLFLI 58
M +R KV+VYEEGE P+ H+GP K +Y++EG+F++E++ R P A+ +
Sbjct: 134 MERRFKVYVYEEGEPPIAHEGPCKNIYAVEGRFIEELELMAPPLGGVRTWDPARAHALFL 193
Query: 59 PFSISNIVQYVYMPILSQQDYHLGRLQRLVEDYVHVVADKYPYWNRSNGADHFLLSCHD 117
P S+S +VQ Y P+ Y L L+ +V DYV VVA ++ +WNRS GADHF+LSCHD
Sbjct: 194 PLSVSQMVQLAYRPL----SYDLSPLRAIVADYVAVVASRHRFWNRSAGADHFMLSCHD 248
>UniRef100_Q9SSE8 MLP3.7 protein [Arabidopsis thaliana]
Length = 470
Score = 108 bits (270), Expect = 3e-23
Identities = 47/117 (40%), Positives = 81/117 (69%), Gaps = 5/117 (4%)
Query: 1 MVKRLKVWVYEEGEQPLVHDGPLKGLYSIEGQFMDEIDSCRKSPFKARHPDEANLFLIPF 60
M K K++VYEEG+ P+ H G K +YS+EG F++ +++ ++ R PD+A+++ +PF
Sbjct: 139 MEKMFKIYVYEEGDPPIFHYGLCKDIYSMEGLFLNFMEN-DVLKYRTRDPDKAHVYFLPF 197
Query: 61 SISNIVQYVYMPILSQQDYHLGRLQRLVEDYVHVVADKYPYWNRSNGADHFLLSCHD 117
S+ I+ +++ P++ + L+R++ DYV +++ KYPYWN S+G DHF+LSCHD
Sbjct: 198 SVVMILHHLFDPVVRDKAV----LERVIADYVQIISKKYPYWNTSDGFDHFMLSCHD 250
>UniRef100_Q8LD60 Hypothetical protein [Arabidopsis thaliana]
Length = 273
Score = 99.0 bits (245), Expect = 2e-20
Identities = 41/113 (36%), Positives = 80/113 (70%), Gaps = 6/113 (5%)
Query: 5 LKVWVYEEGEQPLVHDGPLKGLYSIEGQFMDEIDSCRKSPFKARHPDEANLFLIPFSISN 64
LKV++Y +G++P+ H+ L G+Y+ EG FM ++S + F ++P++A+LF +P+S+
Sbjct: 159 LKVYIYPDGDKPIFHEPHLNGIYASEGWFMKLMES--NTQFVTKNPEKAHLFYMPYSVKQ 216
Query: 65 IVQYVYMPILSQQDYHLGRLQRLVEDYVHVVADKYPYWNRSNGADHFLLSCHD 117
+ + +++P +++ L + DYV++++ KYP+WNR++G+DHFL++CHD
Sbjct: 217 LQKSIFVP----GSHNIKPLSIFLRDYVNMLSIKYPFWNRTHGSDHFLVACHD 265
>UniRef100_Q8RXU2 Hypothetical protein At4g16745 [Arabidopsis thaliana]
Length = 542
Score = 98.6 bits (244), Expect = 3e-20
Identities = 41/113 (36%), Positives = 80/113 (70%), Gaps = 6/113 (5%)
Query: 5 LKVWVYEEGEQPLVHDGPLKGLYSIEGQFMDEIDSCRKSPFKARHPDEANLFLIPFSISN 64
LKV++Y +G++P+ H+ L G+Y+ EG FM ++S ++ F ++P+ A+LF +P+S+
Sbjct: 200 LKVYIYPDGDKPIFHEPHLNGIYASEGWFMKLMESNKQ--FVTKNPERAHLFYMPYSVKQ 257
Query: 65 IVQYVYMPILSQQDYHLGRLQRLVEDYVHVVADKYPYWNRSNGADHFLLSCHD 117
+ + +++P +++ L + DYV++++ KYP+WNR++G+DHFL++CHD
Sbjct: 258 LQKSIFVP----GSHNIKPLSIFLRDYVNMLSIKYPFWNRTHGSDHFLVACHD 306
>UniRef100_O65522 Hypothetical protein F4D11.10 [Arabidopsis thaliana]
Length = 593
Score = 97.8 bits (242), Expect = 5e-20
Identities = 47/117 (40%), Positives = 80/117 (68%), Gaps = 6/117 (5%)
Query: 1 MVKRLKVWVYEEGEQPLVHDGPLKGLYSIEGQFMDEIDSCRKSPFKARHPDEANLFLIPF 60
M K+LKV+VY EG++P++H LKG+Y+ EG FM ++ S R F + P +A+LF +PF
Sbjct: 263 MEKKLKVYVYREGKRPVLHKPVLKGIYASEGWFMKQLKSSR--TFVTKDPRKAHLFYLPF 320
Query: 61 SISNIVQYVYMPILSQQDYHLGRLQRLVEDYVHVVADKYPYWNRSNGADHFLLSCHD 117
S + + +Y+P S D + L + +++Y+ +++ KY +WN++ G+DHFL++CHD
Sbjct: 321 SSKMLEETLYVP-GSHSDKN---LIQFLKNYLDMISSKYSFWNKTGGSDHFLVACHD 373
>UniRef100_Q5VNX0 Pectin-glucuronyltransferase-like [Oryza sativa]
Length = 501
Score = 96.7 bits (239), Expect = 1e-19
Identities = 46/117 (39%), Positives = 73/117 (62%), Gaps = 6/117 (5%)
Query: 1 MVKRLKVWVYEEGEQPLVHDGPLKGLYSIEGQFMDEIDSCRKSPFKARHPDEANLFLIPF 60
M + LKV++Y++G +P+ H PL G+Y+ EG FM + R+ F P +A+LF +P+
Sbjct: 160 MERILKVYIYQDGRRPIFHTPPLSGIYASEGWFMKLLKESRR--FAVTDPAKAHLFYLPY 217
Query: 61 SISNIVQYVYMPILSQQDYHLGRLQRLVEDYVHVVADKYPYWNRSNGADHFLLSCHD 117
S + +Y+P ++L L + D+V +A KYP+WNR+ GADHFL++CHD
Sbjct: 218 SSQQLRISLYVP----DSHNLRPLAAYLRDFVKGLAAKYPFWNRTRGADHFLVACHD 270
>UniRef100_Q657X7 Pectin-glucuronyltransferase-like [Oryza sativa]
Length = 550
Score = 91.7 bits (226), Expect = 4e-18
Identities = 44/117 (37%), Positives = 70/117 (59%), Gaps = 6/117 (5%)
Query: 1 MVKRLKVWVYEEGEQPLVHDGPLKGLYSIEGQFMDEIDSCRKSPFKARHPDEANLFLIPF 60
M + LKV+VY +G +P+ H LKG+Y+ EG FM ++ F R P+ A+LF +P+
Sbjct: 213 MERLLKVFVYHDGAKPIFHSPELKGIYASEGWFMKLMEG--NQHFVVRDPNRAHLFYLPY 270
Query: 61 SISNIVQYVYMPILSQQDYHLGRLQRLVEDYVHVVADKYPYWNRSNGADHFLLSCHD 117
S + +Y+P + + L V+ Y+ ++ K+PYWNR+ GADHF ++CHD
Sbjct: 271 SSRQLEHNLYVPGSNT----IEPLSIFVKKYIDFISTKFPYWNRTKGADHFFVACHD 323
>UniRef100_Q9FGV3 Similarity to limonene cyclase [Arabidopsis thaliana]
Length = 559
Score = 88.2 bits (217), Expect = 4e-17
Identities = 44/117 (37%), Positives = 74/117 (62%), Gaps = 7/117 (5%)
Query: 1 MVKRLKVWVYEEGEQPLVHDGPLKGLYSIEGQFMDEIDSCRKSPFKARHPDEANLFLIPF 60
M ++LK++VY+EG +P+ H +G+Y+ EG FM ++S +K F + P +A+LF IP
Sbjct: 222 MERKLKIYVYKEGGKPIFHTPMPRGIYASEGWFMKLMESNKK--FVVKDPRKAHLFYIPI 279
Query: 61 SISNIVQYVYMPILSQQDYHLGRLQRLVEDYVHVVADKYPYWNRSNGADHFLLSCHD 117
SI + + + + + L +++YV ++A KY +WNR+ GADHFL++CHD
Sbjct: 280 SIKALRSSLGLDFQTPKS-----LADHLKEYVDLIAGKYKFWNRTGGADHFLVACHD 331
>UniRef100_Q9LYD1 Hypothetical protein F15N18_200 [Arabidopsis thaliana]
Length = 546
Score = 86.3 bits (212), Expect = 2e-16
Identities = 43/119 (36%), Positives = 72/119 (60%), Gaps = 8/119 (6%)
Query: 1 MVKRLKVWVYEEGEQPLVH--DGPLKGLYSIEGQFMDEIDSCRKSPFKARHPDEANLFLI 58
M + LKV+VY EG++P+ H + ++G+Y+ EG FM ++S + F + P +A+LF I
Sbjct: 216 MEQTLKVYVYSEGDRPIFHQPEAIMEGIYASEGWFMKLMESSHR--FLTKDPTKAHLFYI 273
Query: 59 PFSISNIVQYVYMPILSQQDYHLGRLQRLVEDYVHVVADKYPYWNRSNGADHFLLSCHD 117
PFS + Q +Y+ + L + + +Y+ ++A YP WNR+ G+DHF +CHD
Sbjct: 274 PFSSRILQQKLYV----HDSHSRNNLVKYLGNYIDLIASNYPSWNRTCGSDHFFTACHD 328
>UniRef100_Q8GYD4 Hypothetical protein At5g11610/F15N18_200 [Arabidopsis thaliana]
Length = 546
Score = 86.3 bits (212), Expect = 2e-16
Identities = 43/119 (36%), Positives = 72/119 (60%), Gaps = 8/119 (6%)
Query: 1 MVKRLKVWVYEEGEQPLVH--DGPLKGLYSIEGQFMDEIDSCRKSPFKARHPDEANLFLI 58
M + LKV+VY EG++P+ H + ++G+Y+ EG FM ++S + F + P +A+LF I
Sbjct: 216 MEQTLKVYVYSEGDRPIFHQPEAIMEGIYASEGWFMKLMESSHR--FLTKDPTKAHLFYI 273
Query: 59 PFSISNIVQYVYMPILSQQDYHLGRLQRLVEDYVHVVADKYPYWNRSNGADHFLLSCHD 117
PFS + Q +Y+ + L + + +Y+ ++A YP WNR+ G+DHF +CHD
Sbjct: 274 PFSSRILQQKLYV----HDSHSRNNLVKYLGNYIDLIASNYPSWNRTCGSDHFFTACHD 328
>UniRef100_Q9SZK4 Hypothetical protein F20D10.160 [Arabidopsis thaliana]
Length = 425
Score = 80.5 bits (197), Expect = 8e-15
Identities = 47/123 (38%), Positives = 65/123 (52%), Gaps = 22/123 (17%)
Query: 1 MVKRLKVWVYEEGEQPLVHDGPLK--GLYSIEGQFMDEIDSCRKSPFKARHPDEANLFLI 58
M KR KV++Y +G+ + P K G Y+ EG F I R+S F+ PDEA+LF I
Sbjct: 100 MEKRFKVYIYPDGDPNTFYQTPRKVTGKYASEGYFFQNI---RESRFRTLDPDEADLFFI 156
Query: 59 PFSISNI----VQYVYMPILSQQDYHLGRLQRLVEDYVHVVADKYPYWNRSNGADHFLLS 114
P S + Y M ++ V++YV + KYPYWNR+ GADHF ++
Sbjct: 157 PISCHKMRGKGTSYENMTVI-------------VQNYVDGLIAKYPYWNRTLGADHFFVT 203
Query: 115 CHD 117
CHD
Sbjct: 204 CHD 206
>UniRef100_Q6ZIF8 Putative pectin-glucuronyltransferase [Oryza sativa]
Length = 402
Score = 77.4 bits (189), Expect = 7e-14
Identities = 45/123 (36%), Positives = 65/123 (52%), Gaps = 22/123 (17%)
Query: 1 MVKRLKVWVYEEGEQPLVHDGPLK--GLYSIEGQFMDEIDSCRKSPFKARHPDEANLFLI 58
M + KV++Y +G+ + P K G Y+ EG F I R+S F+ PD+A+LF +
Sbjct: 77 MERSFKVYMYPDGDPKTFYQTPRKLTGKYASEGYFFQNI---RESRFRTGDPDKAHLFFV 133
Query: 59 PFSISNI----VQYVYMPILSQQDYHLGRLQRLVEDYVHVVADKYPYWNRSNGADHFLLS 114
P S + Y M I+ V+DYV + +KYPYWNR+ GADHF ++
Sbjct: 134 PISPHKMRGKGTSYENMTII-------------VKDYVEGLINKYPYWNRTLGADHFFVT 180
Query: 115 CHD 117
CHD
Sbjct: 181 CHD 183
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.323 0.142 0.448
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 210,459,325
Number of Sequences: 2790947
Number of extensions: 7889034
Number of successful extensions: 14927
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 14833
Number of HSP's gapped (non-prelim): 61
length of query: 117
length of database: 848,049,833
effective HSP length: 93
effective length of query: 24
effective length of database: 588,491,762
effective search space: 14123802288
effective search space used: 14123802288
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 67 (30.4 bits)
Lotus: description of TM0030.13