BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0024.11
(148 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_UPI0000290CB9 UPI0000290CB9 UniRef100 entry 35 0.34
UniRef100_UPI0000220723 UPI0000220723 UniRef100 entry 35 0.34
UniRef100_Q93AC2 Replication protein [Aneurinibacillus thermoaer... 35 0.34
UniRef100_Q9UTQ5 SPAC1071.09c protein [Schizosaccharomyces pombe] 35 0.34
UniRef100_Q9AQR7 Replication protein [Bacillus sp. B-3] 35 0.45
UniRef100_Q04140 Replicative protein [Plasmid pBC1] 35 0.45
UniRef100_Q8V7H3 ORF3 [TT virus] 34 0.58
UniRef100_Q25148 Troponin T [Halocynthia roretzi] 34 0.58
UniRef100_UPI000032E82B UPI000032E82B UniRef100 entry 34 0.76
UniRef100_Q63VE1 Putative exported protein [Burkholderia pseudom... 34 0.76
UniRef100_Q62FG5 ABC transporter, periplasmic substrate-binding ... 34 0.76
UniRef100_Q5UFQ7 Anthranilate N-hydroxycinnamoyl/benzoyltransfer... 33 0.99
UniRef100_P87137 Hypothetical protein C57A7.06 in chromosome I [... 33 1.7
UniRef100_UPI00002F4C0B UPI00002F4C0B UniRef100 entry 32 2.2
UniRef100_UPI0000220E53 UPI0000220E53 UniRef100 entry 32 2.2
UniRef100_Q9W6Q9 U2 small nuclear ribonucleoprotein auxiliary fa... 32 2.2
UniRef100_Q7ZUL6 RNA polymerase III 80 kDa subunit RPC5 [Brachyd... 32 2.2
UniRef100_UPI000046AD3D UPI000046AD3D UniRef100 entry 32 2.9
UniRef100_UPI0000346855 UPI0000346855 UniRef100 entry 32 2.9
UniRef100_UPI00002E5E52 UPI00002E5E52 UniRef100 entry 32 2.9
>UniRef100_UPI0000290CB9 UPI0000290CB9 UniRef100 entry
Length = 283
Score = 35.0 bits (79), Expect = 0.34
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 12/89 (13%)
Query: 58 KSQKRWFRSK--------EISVARLPESEYYRAYSPEFRNETLVEGKIKRIFKFSKDSKS 109
K+ KRW + K EIS+A P+++ +++ + N + KI KF +D +
Sbjct: 25 KTFKRWMKLKGVSKKIFSEISIA-YPQNQETKSFIKKISNTKI---KILGNLKFIEDDER 80
Query: 110 HLKRSSKSEIAYSGHARRKAANSCHAYTD 138
++K+S K I+Y + A+S H Y +
Sbjct: 81 NIKKSQKKLISYFKNRNVWVASSTHQYEE 109
>UniRef100_UPI0000220723 UPI0000220723 UniRef100 entry
Length = 1187
Score = 35.0 bits (79), Expect = 0.34
Identities = 36/131 (27%), Positives = 69/131 (52%), Gaps = 19/131 (14%)
Query: 15 KSDYDFSTIKFRNHVHQGILREILASEFQNSKQISKIWEKRY--LKSQKRWFRSKEIS-- 70
+SDYD STI F + G+ R++ E + S+ IS + K++ LK ++ F+ E+
Sbjct: 200 RSDYDLSTIYFTKFI--GLPRQLKTVEIKFSEVISAMDMKKFNKLKESEKIFKPVELMIN 257
Query: 71 -VARLPESEYYRAYSPEFRNETLVEGKIKRIFKFSKDSKSHLKRSSKSEIAY--SGHARR 127
+ R E E +++ +P ++ + + +++F+F + SSK+++A+ S + R
Sbjct: 258 LIMRRREIEKFQS-TPNYK---IAKKNFEQVFEFVT-----ILDSSKNDVAFLKSLISSR 308
Query: 128 KAANSCHAYTD 138
N H YTD
Sbjct: 309 TQKNILH-YTD 318
>UniRef100_Q93AC2 Replication protein [Aneurinibacillus thermoaerophilus]
Length = 258
Score = 35.0 bits (79), Expect = 0.34
Identities = 25/81 (30%), Positives = 42/81 (50%), Gaps = 3/81 (3%)
Query: 7 VTTIPKGTKSDYDFSTIKFRNHVHQGILREILASEFQNSKQISKIWEKRYLKSQKRWFRS 66
V TI + K + F T+ RN + L E + + F+ ++++ K + S K +FR+
Sbjct: 18 VETINEREKVRWVFLTLTVRNTDAES-LPETIKAMFKGFQRLTNY--KAFKTSVKGYFRA 74
Query: 67 KEISVARLPESEYYRAYSPEF 87
E++ R PESE + Y P F
Sbjct: 75 LEVTKNRDPESESFGTYHPHF 95
>UniRef100_Q9UTQ5 SPAC1071.09c protein [Schizosaccharomyces pombe]
Length = 282
Score = 35.0 bits (79), Expect = 0.34
Identities = 24/110 (21%), Positives = 55/110 (49%), Gaps = 9/110 (8%)
Query: 14 TKSDYDFSTIKFRNHVHQGILREILASEFQNSKQISKIWEKRYLKSQKRWFRS-----KE 68
T +D DF ++ + ++QG++ +EF+ S Q S+ + LK+ ++ S +E
Sbjct: 104 TDADIDFDWKEWLDELYQGVVSGETLNEFKASYQYSEEEKCDVLKAYEKGKGSMDVILEE 163
Query: 69 ISVARLPESEYYRAYSPEFRNETLVEGKIKRIFKFSKDSKSHLKRSSKSE 118
+ + + + +R + N + +GKI + +F+ + K +R+ +E
Sbjct: 164 VMCCEISDEDRFR----QVINNAIKDGKISKYKRFAPNEKKRKRRAKAAE 209
>UniRef100_Q9AQR7 Replication protein [Bacillus sp. B-3]
Length = 290
Score = 34.7 bits (78), Expect = 0.45
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Query: 7 VTTIPKGTKSDYDFSTIKFRNHVHQGILREILASEFQNSKQISKIWEKRYLKSQKRWFRS 66
V T+ + + F T+ RN + L E +++ F+ +++ I K + S K +FR+
Sbjct: 49 VETVNQRENVKWLFLTLTVRNTSPES-LPETISAMFEGFRRL--IQYKAFKTSVKGYFRA 105
Query: 67 KEISVARLPESEYYRAYSPEF 87
E++ R PESE + Y P F
Sbjct: 106 LEVTKNRDPESESFGTYHPHF 126
>UniRef100_Q04140 Replicative protein [Plasmid pBC1]
Length = 259
Score = 34.7 bits (78), Expect = 0.45
Identities = 21/68 (30%), Positives = 37/68 (53%), Gaps = 3/68 (4%)
Query: 20 FSTIKFRNHVHQGILREILASEFQNSKQISKIWEKRYLKSQKRWFRSKEISVARLPESEY 79
F T+ RN + L E +++ F+ +++K K + S K +FR+ E++ R P SE+
Sbjct: 31 FLTLTVRNTSPES-LPETISAMFEGFNRLTKY--KAFKTSVKGYFRALEVTKNRDPHSEW 87
Query: 80 YRAYSPEF 87
+ Y P F
Sbjct: 88 FGTYHPHF 95
>UniRef100_Q8V7H3 ORF3 [TT virus]
Length = 277
Score = 34.3 bits (77), Expect = 0.58
Identities = 32/143 (22%), Positives = 58/143 (40%), Gaps = 13/143 (9%)
Query: 11 PKGTKSDYDFSTIKFRNHVHQG---------ILREILASEFQNSKQISKIWEKRYLKSQK 61
P T +Y + T ++ +H + R +L E QN+ ++ ++++
Sbjct: 116 PINTLEEYKYQTRRYSDHPQSSTHGTSDVDCLARRVL-KECQNTNRLMTLFQQASSSKDP 174
Query: 62 RWFRSKEISVARLPESEYYRAYSPEFRNETLVEGKIKRIFKFSKDSKSH-LKRSSKSEIA 120
W S + + P+ + YS + + K K SK SK H SS S +
Sbjct: 175 DWKPSTK--EPKKPQKKTPTLYSKHSKKSKRAAARKKNSHKKSKRSKKHNSSSSSNSSSS 232
Query: 121 YSGHARRKAANSCHAYTDSTRES 143
S +R ++ S +DS +ES
Sbjct: 233 NSESSRGESDTSSETSSDSEKES 255
>UniRef100_Q25148 Troponin T [Halocynthia roretzi]
Length = 248
Score = 34.3 bits (77), Expect = 0.58
Identities = 36/135 (26%), Positives = 55/135 (40%), Gaps = 19/135 (14%)
Query: 4 TTSVTTIPKGTKSDYDFSTIKFRNHVHQGILREILASEFQNSKQISKIWEKRYLKSQKRW 63
TTS+ +P G K D D T K R+ L+ ++ + F+ KQ + E+ L+ +KR
Sbjct: 24 TTSIPRLPDGEKVDLDVITQK-RHQKDLEELQALITAHFEQRKQEEEQLEELRLRLEKR- 81
Query: 64 FRSKEISVARLPESEYYRAYSPEFRNETLVEGKIKRIFKFSKDSKSHLKRSSKSEIA--- 120
KE RL E E E + + +R K +D K + K + A
Sbjct: 82 ---KEERAERLRIRE-------EKTKERVAREREERKHKEEEDEKKRKEEEEKKKAAIAN 131
Query: 121 ----YSGHARRKAAN 131
Y G+ R N
Sbjct: 132 MSLHYGGYLARAEKN 146
>UniRef100_UPI000032E82B UPI000032E82B UniRef100 entry
Length = 229
Score = 33.9 bits (76), Expect = 0.76
Identities = 19/53 (35%), Positives = 28/53 (51%), Gaps = 5/53 (9%)
Query: 41 EFQNSKQISKIWEKRYLKSQ-----KRWFRSKEISVARLPESEYYRAYSPEFR 88
E Q ++ + WEK+ +++ KR+FR +E S PE E YSP FR
Sbjct: 84 ELQELREKQEGWEKQRRETENKNKWKRFFRRREASNENSPEKEQQTRYSPLFR 136
>UniRef100_Q63VE1 Putative exported protein [Burkholderia pseudomallei]
Length = 353
Score = 33.9 bits (76), Expect = 0.76
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 10 IPK-GTKS-DYDFSTIKFRNHVHQGILREILASEFQNSKQISKIWEKRYLKSQKRWFRSK 67
IPK GT S Y S +K H G R++L +F S + K+W YL+ +
Sbjct: 259 IPKEGTISVPYVMSLVKGAPHEANG--RKVL--DFVLSDEGQKLWASAYLRPVRAQALGA 314
Query: 68 EISVARLPESEYYRAYSPEF 87
+++ LP SEY RA S +F
Sbjct: 315 DVAAQFLPASEYARAKSVDF 334
>UniRef100_Q62FG5 ABC transporter, periplasmic substrate-binding protein
[Burkholderia mallei]
Length = 353
Score = 33.9 bits (76), Expect = 0.76
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 10 IPK-GTKS-DYDFSTIKFRNHVHQGILREILASEFQNSKQISKIWEKRYLKSQKRWFRSK 67
IPK GT S Y S +K H G R++L +F S + K+W YL+ +
Sbjct: 259 IPKEGTISVPYVMSLVKGAPHEANG--RKVL--DFVLSDEGQKLWANAYLRPVRAQALGA 314
Query: 68 EISVARLPESEYYRAYSPEF 87
+++ LP SEY RA S +F
Sbjct: 315 DVAAQFLPASEYARAKSVDF 334
>UniRef100_Q5UFQ7 Anthranilate N-hydroxycinnamoyl/benzoyltransferase [Malus
domestica]
Length = 398
Score = 33.5 bits (75), Expect = 0.99
Identities = 20/67 (29%), Positives = 31/67 (45%)
Query: 61 KRWFRSKEISVARLPESEYYRAYSPEFRNETLVEGKIKRIFKFSKDSKSHLKRSSKSEIA 120
KRW IS R+P S+ S ++ V +R+F FSK+ + LK + +EI
Sbjct: 146 KRWLLDGTISPIRIPFSKIEDQVSDKYIGNIRVPLLKERVFHFSKEKIAQLKAKANAEIQ 205
Query: 121 YSGHARR 127
R+
Sbjct: 206 LENTKRK 212
>UniRef100_P87137 Hypothetical protein C57A7.06 in chromosome I [Schizosaccharomyces
pombe]
Length = 929
Score = 32.7 bits (73), Expect = 1.7
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 10/99 (10%)
Query: 34 LREILASEFQNSKQISKIWEKRYLKSQKRWFRSKEISVARLPESEYYRAYSPEFRNETLV 93
+RE++ E + +K+++KI K Y K +K KE +A +P+SE + NE +
Sbjct: 436 MRELMFREERKAKRVAKIKSKTYRKIRK---NRKEKEMALIPKSE------EDLENERIK 486
Query: 94 EGKIKRIFKFSKDSKSHLKRSSKS-EIAYSGHARRKAAN 131
+ + + + ++ K+ + K E A G R+A N
Sbjct: 487 SEEARALERMTQRHKNTSSWTRKMLERASHGEGTREAVN 525
>UniRef100_UPI00002F4C0B UPI00002F4C0B UniRef100 entry
Length = 406
Score = 32.3 bits (72), Expect = 2.2
Identities = 39/135 (28%), Positives = 60/135 (43%), Gaps = 18/135 (13%)
Query: 2 ILTTSVTTIPKGTKSDYDFSTIKFRNHVHQ------GILREILASEFQNSKQI---SKIW 52
IL TS TT S Y S KF+ +HQ IL ++ + ++ I S+IW
Sbjct: 80 ILITSSTT-----SSSYILSKYKFKKTIHQFYPFDLNILTKLFINYWKPRLAIFVDSEIW 134
Query: 53 EKRYLKSQKRWFRSKEISVARLPESEYYR-AYSPEFRNETLVEGKIKRIFKFSKDSKSHL 111
Y K+ ++ AR+ E + R Y P F ++T+ E KI +K+SK +L
Sbjct: 135 PNMYNNLYKKKIPLILLN-ARITEKSFKRWKYFPNF-SKTIFE-KISVALPQNKESKKYL 191
Query: 112 KRSSKSEIAYSGHAR 126
K I G+ +
Sbjct: 192 KLLGTKNIKTVGNIK 206
>UniRef100_UPI0000220E53 UPI0000220E53 UniRef100 entry
Length = 278
Score = 32.3 bits (72), Expect = 2.2
Identities = 36/114 (31%), Positives = 52/114 (45%), Gaps = 15/114 (13%)
Query: 24 KFRNHVHQGILREILASEFQNSK-------QISKIWEKRYLK---SQKRWFRSKEISVAR 73
KF N Q + R EF+NS+ +I K LK S+ FR+ EI R
Sbjct: 163 KFGNSEIQKV-RNSEIPEFRNSEIQKFGNSEIQKFKNSEILKFRNSEMPEFRNSEIQKFR 221
Query: 74 LPESEYYR-AYSPEFRNETLVEGKIKRIFKFSKDSKSHLKRSSKSEIAYSGHAR 126
E + +R A PEFRN + E + I KF S +++ SEI G+++
Sbjct: 222 NSEIQKFRNAGIPEFRNSEIPEFRNSEIQKF---WNSEIQKFRNSEIREFGNSK 272
>UniRef100_Q9W6Q9 U2 small nuclear ribonucleoprotein auxiliary factor subunit-related
protein [Fugu rubripes]
Length = 605
Score = 32.3 bits (72), Expect = 2.2
Identities = 29/83 (34%), Positives = 36/83 (42%), Gaps = 13/83 (15%)
Query: 53 EKRYLKSQKRWFRSKEISVARLPESEYYRAY-----SPEFRNETLVEGKI--------KR 99
E+RY + +KR RSKE +R E R SP+ R+E G KR
Sbjct: 454 EERYSRGEKRETRSKERGKSRSSSREGKRTKRSRERSPKKRSEHENNGSADCKKRRHHKR 513
Query: 100 IFKFSKDSKSHLKRSSKSEIAYS 122
K K SK H KRS S+ S
Sbjct: 514 TKKSKKKSKKHKKRSRVSDAGTS 536
>UniRef100_Q7ZUL6 RNA polymerase III 80 kDa subunit RPC5 [Brachydanio rerio]
Length = 696
Score = 32.3 bits (72), Expect = 2.2
Identities = 15/40 (37%), Positives = 23/40 (57%)
Query: 91 TLVEGKIKRIFKFSKDSKSHLKRSSKSEIAYSGHARRKAA 130
T ++ K++++F FSKD H K + +SG R KAA
Sbjct: 425 TGIQSKLEKVFNFSKDDFVHKKDVQIEPVHFSGDQRLKAA 464
>UniRef100_UPI000046AD3D UPI000046AD3D UniRef100 entry
Length = 209
Score = 32.0 bits (71), Expect = 2.9
Identities = 26/118 (22%), Positives = 51/118 (43%), Gaps = 15/118 (12%)
Query: 41 EFQNSKQISKI----------WEKRYLKSQKRWFRSKEISVARLPESEYYRAYSPEFRNE 90
E++N+K + ++ EKRY+K K+ ++SK S Y + +E
Sbjct: 56 EYENAKYLEELNKNREAKIKEQEKRYIKKLKKKYKSKHKKKGSKDSSSSYGSSYSSSSSE 115
Query: 91 TLVEGKIKRIFKFSKDSKSHLKRSSKSEIAYSG-----HARRKAANSCHAYTDSTRES 143
+ + K+ K K K + + +S S+ YS H ++K+ + DS ++
Sbjct: 116 RDTKKRKKKNKKNKKKKKINKESTSSSDDTYSSSASSDHVKKKSKKRNPSSDDSDNDN 173
>UniRef100_UPI0000346855 UPI0000346855 UniRef100 entry
Length = 198
Score = 32.0 bits (71), Expect = 2.9
Identities = 24/84 (28%), Positives = 38/84 (44%), Gaps = 8/84 (9%)
Query: 29 VHQGILREILASEFQNSKQISKIWEKRYLKSQKRWFRSKEISVARLPESEYYRAYSPEFR 88
+++ IL L ++ +SK S K++LK W RS I+ + + PEF
Sbjct: 81 INKTILPNTLITDVGSSKTESSKVIKKFLKKGINWIRSHPIAGSEVS--------GPEFG 132
Query: 89 NETLVEGKIKRIFKFSKDSKSHLK 112
+ EGK + K K S +LK
Sbjct: 133 KADMFEGKWCVLIKDKKTSTKNLK 156
>UniRef100_UPI00002E5E52 UPI00002E5E52 UniRef100 entry
Length = 365
Score = 32.0 bits (71), Expect = 2.9
Identities = 27/85 (31%), Positives = 37/85 (42%), Gaps = 11/85 (12%)
Query: 33 ILREILASEFQNSKQISKIWEKRYLKSQKRWFRSKEI----------SVARLPESEYYRA 82
+LRE + SEF NS I +KS + FR +EI S R+ EY
Sbjct: 128 VLREYVISEFMNSVNIPTTRSLMAIKSNENVFRDEEIPGGILARVANSHIRIGTFEYVSY 187
Query: 83 YSPEFRNETLVEGKIKRIFKFSKDS 107
+ P ETL + IKR + D+
Sbjct: 188 FKPN-SLETLADYVIKRHYPELSDA 211
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.316 0.128 0.360
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 220,295,188
Number of Sequences: 2790947
Number of extensions: 7961551
Number of successful extensions: 26270
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 53
Number of HSP's that attempted gapping in prelim test: 26255
Number of HSP's gapped (non-prelim): 64
length of query: 148
length of database: 848,049,833
effective HSP length: 124
effective length of query: 24
effective length of database: 501,972,405
effective search space: 12047337720
effective search space used: 12047337720
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 67 (30.4 bits)
Lotus: description of TM0024.11