BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0023.8
         (85 letters)

Database: uniref100 
           2,790,947 sequences; 848,049,833 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

UniRef100_Q8A3R6 Glycosyltransferase [Bacteroides thetaiotaomicron]    32  5.1
UniRef100_UPI00002B3E69 UPI00002B3E69 UniRef100 entry                  31  6.7
UniRef100_Q6DVG3 ATP synthase F0 subunit 6 [Podura aquatica]           31  8.7

>UniRef100_Q8A3R6 Glycosyltransferase [Bacteroides thetaiotaomicron]
          Length = 355

 Score = 31.6 bits (70), Expect = 5.1
 Identities = 18/54 (33%), Positives = 29/54 (53%)

Query: 1   MILIGVMFFYFFFCNFIGLITMGLLLRIGIGDVAWLSFVLQLKTKEEIRGRRGM 54
           MILI  +  +F F N + +  +   + I I  V W++F L L  +E IR + G+
Sbjct: 299 MILILALALFFSFFNIVAVEYISNNIVIFIDIVLWIAFHLWLDRRELIRAKHGV 352


>UniRef100_UPI00002B3E69 UPI00002B3E69 UniRef100 entry
          Length = 182

 Score = 31.2 bits (69), Expect = 6.7
 Identities = 22/76 (28%), Positives = 37/76 (47%), Gaps = 11/76 (14%)

Query: 3  LIGVMFFYFFFCNFIGLITMGLLLRIGIGDVAWLSFVLQLKTKEEIRGRRGMNLHLLTLL 62
          LI V F YFF  +    IT  +++ +GI    +L F+ +   K ++  R        +  
Sbjct: 29 LIAVNFVYFFLNSNFDFITSNIVIFLGILSNLYLIFIYK---KTQLSDR--------SAF 77

Query: 63 LDLMFSMLQFGYTLFL 78
          L L+  +LQ G+ L+L
Sbjct: 78 LFLLIDILQLGFLLYL 93


>UniRef100_Q6DVG3 ATP synthase F0 subunit 6 [Podura aquatica]
          Length = 220

 Score = 30.8 bits (68), Expect = 8.7
 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 6/45 (13%)

Query: 2   ILIGVMFFYFFFCNFIGLI------TMGLLLRIGIGDVAWLSFVL 40
           I+   +FF F F NF+GL       +  L++ + +    W+SF+L
Sbjct: 68  IMFSALFFIFLFNNFLGLFPYIFTSSSHLVMNLSVAAPMWMSFML 112


  Database: uniref100
    Posted date:  Jan 5, 2005  1:24 AM
  Number of letters in database: 848,049,833
  Number of sequences in database:  2,790,947
  
Lambda     K      H
   0.343    0.159    0.492 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 134,807,633
Number of Sequences: 2790947
Number of extensions: 4584957
Number of successful extensions: 23479
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 23478
Number of HSP's gapped (non-prelim): 3
length of query: 85
length of database: 848,049,833
effective HSP length: 61
effective length of query: 24
effective length of database: 677,802,066
effective search space: 16267249584
effective search space used: 16267249584
T: 11
A: 40
X1: 15 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.9 bits)
S2: 68 (30.8 bits)