BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0023.12
(152 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q62MG1 Hypothetical protein [Burkholderia mallei] 37 0.088
UniRef100_Q67VR9 Hypothetical protein OSJNBa0072A21.31 [Oryza sa... 36 0.20
UniRef100_UPI00002FA02C UPI00002FA02C UniRef100 entry 35 0.26
UniRef100_UPI000032EE69 UPI000032EE69 UniRef100 entry 35 0.44
UniRef100_Q6NXJ5 Gm1568 protein [Mus musculus] 35 0.44
UniRef100_Q9M4X9 Flagellar autotomy protein Fa1p [Chlamydomonas ... 35 0.44
UniRef100_Q5PQB3 Hypothetical protein [Xenopus laevis] 34 0.57
UniRef100_Q62318-2 Splice isoform 2 of Q62318 [Mus musculus] 34 0.57
UniRef100_Q62318 Transcription intermediary factor 1-beta [Mus m... 34 0.57
UniRef100_UPI000021B299 UPI000021B299 UniRef100 entry 34 0.74
UniRef100_Q69QN9 Hypothetical protein OSJNBa0019N02.138 [Oryza s... 34 0.74
UniRef100_UPI0000428772 UPI0000428772 UniRef100 entry 33 0.97
UniRef100_UPI00001D02C6 UPI00001D02C6 UniRef100 entry 33 0.97
UniRef100_Q7XGM7 Hypothetical protein [Oryza sativa] 33 0.97
UniRef100_Q75KL2 Hypothetical protein OJ1264_A04.16 [Oryza sativa] 33 0.97
UniRef100_Q8S7I0 Hypothetical protein OSJNBa0010I09.13 [Oryza sa... 33 0.97
UniRef100_Q655C0 Seed specific protein, 5'-partial-like protein ... 33 1.3
UniRef100_UPI00001CF854 UPI00001CF854 UniRef100 entry 33 1.7
UniRef100_UPI000032AC92 UPI000032AC92 UniRef100 entry 33 1.7
UniRef100_Q6Z219 Hypothetical protein B1111C03.11 [Oryza sativa] 33 1.7
>UniRef100_Q62MG1 Hypothetical protein [Burkholderia mallei]
Length = 157
Score = 37.0 bits (84), Expect = 0.088
Identities = 15/58 (25%), Positives = 33/58 (56%)
Query: 2 ATTVQEATQNKRGSGAAGTEAEAAAAAEGMEAATARTAEAGGGEGFERSSRSRLCREV 59
A+++++A +K G+G A+ A+ ++A RT + GG+ F++ ++C +V
Sbjct: 92 ASSIKDALMSKLGAGVTSDSTYASGASGILDAGNGRTLDLSGGQSFKQQLTKQVCDKV 149
>UniRef100_Q67VR9 Hypothetical protein OSJNBa0072A21.31 [Oryza sativa]
Length = 161
Score = 35.8 bits (81), Expect = 0.20
Identities = 29/79 (36%), Positives = 37/79 (46%), Gaps = 8/79 (10%)
Query: 12 KRGSGAAGTEAEAAAAAEGMEAATARTA--EAGGGEGFE----RSSRSRLCREVA--ECG 63
KR + A G + EAAAAA+G E + R EAG G G R R C +VA G
Sbjct: 60 KRPAAAVGKKEEAAAAADGAEVGSGRGGGEEAGSGGGVSGEDAAERRQRSCEDVASVHMG 119
Query: 64 QYINRYKSLLPLRVFVFTA 82
+ +SL R VF +
Sbjct: 120 RRRRSERSLRAWRSEVFAS 138
>UniRef100_UPI00002FA02C UPI00002FA02C UniRef100 entry
Length = 3070
Score = 35.4 bits (80), Expect = 0.26
Identities = 20/33 (60%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 14 GSGAAGTEAEAAAAAEGMEAATARTAEAGGGEG 46
G GAA A AAAAA G E A A A AGGG+G
Sbjct: 1158 GEGAAAAAAAAAAAAAG-EGAAAAAAAAGGGDG 1189
>UniRef100_UPI000032EE69 UPI000032EE69 UniRef100 entry
Length = 132
Score = 34.7 bits (78), Expect = 0.44
Identities = 20/46 (43%), Positives = 24/46 (51%)
Query: 14 GSGAAGTEAEAAAAAEGMEAATARTAEAGGGEGFERSSRSRLCREV 59
G G AG A AAAAA A A A AG G G E ++ R+ +V
Sbjct: 78 GGGGAGAAAAAAAAAAAAAAGAAAGAAAGAGAGAEGNNLVRMRSQV 123
>UniRef100_Q6NXJ5 Gm1568 protein [Mus musculus]
Length = 706
Score = 34.7 bits (78), Expect = 0.44
Identities = 37/139 (26%), Positives = 54/139 (38%), Gaps = 13/139 (9%)
Query: 10 QNKRGSGAAGTEAEAAAAAEGMEAATARTAEAGGGEGFERSSRSRLCREVAECGQYINRY 69
+ K G+ G+E + A A+E +A A+ A + R AE G+
Sbjct: 8 EEKEGAEPGGSEGDEATASEPPDAQGAQQPAASSASASAAAPRKAEVPCGAEGGR--REQ 65
Query: 70 KSLLPLRVFVFTAP---SKRTAVKSSCHLNRCKRGAVKALFWCSVELDSLIVEAGSYLTN 126
LL L +F F P R + S L C R AVK + L+ A + L
Sbjct: 66 SPLLHLDLFNFACPEAEGSRYVLTSPRSLEACARCAVKPV--------ELLPRALADLVR 117
Query: 127 QDPNRSIELPNLFPALYEA 145
+ P RS+ + YEA
Sbjct: 118 EAPGRSMRVATGLYEAYEA 136
>UniRef100_Q9M4X9 Flagellar autotomy protein Fa1p [Chlamydomonas reinhardtii]
Length = 1787
Score = 34.7 bits (78), Expect = 0.44
Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Query: 15 SGAAGTEAEAAAAAEGMEAATARTAEAGGGEGF---ERSSRSRLCREVAECGQYINRYKS 71
+GAAG A A AA MEAA A A A G G RS L + + + + RY+S
Sbjct: 1698 AGAAGGAAAAMEAARAMEAAAALEAAAAGSAGLLGSRSDGRSGLGEDEEDIRELLARYRS 1757
>UniRef100_Q5PQB3 Hypothetical protein [Xenopus laevis]
Length = 834
Score = 34.3 bits (77), Expect = 0.57
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Query: 2 ATTVQEATQNKRGSG--AAGTEAEAAAAAEGMEAATARTAEAGGGEGFERSSRSRLCRE 58
A T A GSG +AG E AA++ +A A + GGGE E +CRE
Sbjct: 13 AATAASAASGSPGSGEGSAGGEKRPAASSAAAASAAASSPAGGGGEAQELLEHCGVCRE 71
>UniRef100_Q62318-2 Splice isoform 2 of Q62318 [Mus musculus]
Length = 500
Score = 34.3 bits (77), Expect = 0.57
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Query: 2 ATTVQEATQNKRGSG--AAGTEAEAAAAAEGMEAATARTAEAGGGEGFERSSRSRLCRE 58
A T A GSG +AG E AA++ +A A + GGGE E +CRE
Sbjct: 13 AATAASAASGSPGSGEGSAGGEKRPAASSAAAASAAASSPAGGGGEAQELLEHCGVCRE 71
>UniRef100_Q62318 Transcription intermediary factor 1-beta [Mus musculus]
Length = 834
Score = 34.3 bits (77), Expect = 0.57
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Query: 2 ATTVQEATQNKRGSG--AAGTEAEAAAAAEGMEAATARTAEAGGGEGFERSSRSRLCRE 58
A T A GSG +AG E AA++ +A A + GGGE E +CRE
Sbjct: 13 AATAASAASGSPGSGEGSAGGEKRPAASSAAAASAAASSPAGGGGEAQELLEHCGVCRE 71
>UniRef100_UPI000021B299 UPI000021B299 UniRef100 entry
Length = 2011
Score = 33.9 bits (76), Expect = 0.74
Identities = 25/59 (42%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
Query: 7 EATQNKRGSGAAGTEAEAAAAAEGMEAA-TARTAEAGGGEGFERSSRSRLCREVAECGQ 64
EA NK AA EAE AAA E EAA A+ AE E R + RE E Q
Sbjct: 1059 EAAANKEAEEAAAREAEEAAAREAEEAAQAAKEAE----EAAAREAEEAAAREAEEAAQ 1113
>UniRef100_Q69QN9 Hypothetical protein OSJNBa0019N02.138 [Oryza sativa]
Length = 193
Score = 33.9 bits (76), Expect = 0.74
Identities = 21/48 (43%), Positives = 25/48 (51%), Gaps = 1/48 (2%)
Query: 14 GSGAAGTEAEAAAAAEGMEAATARTAEAGGGEGFERSSRSRLCREVAE 61
G G AG A+AA A G A AR E GGGE + R+ R+ AE
Sbjct: 113 GDGTAGRRADAAVGAAGGRPA-AREREGGGGEKWVRTGERERERKEAE 159
>UniRef100_UPI0000428772 UPI0000428772 UniRef100 entry
Length = 1635
Score = 33.5 bits (75), Expect = 0.97
Identities = 29/99 (29%), Positives = 39/99 (39%), Gaps = 13/99 (13%)
Query: 16 GAAGTEAEAAAAAEGMEAAT---ARTAEAGGGEGFERSSRSRLCREVAECGQYINRYKSL 72
G+ + ++A AEGMEA T A E G FE S+ +C + + L
Sbjct: 1432 GSLQGQVSSSAMAEGMEALTKVLAELREGDIGSSFEAISK--------QCRAFFDNESEL 1483
Query: 73 LPLRVFVFTAPSKRTAVKSSCHL--NRCKRGAVKALFWC 109
L L+ FV + S H KRG V L C
Sbjct: 1484 LRLKAFVLFGKLTKVVGISKKHFFKGEVKRGWVSLLLHC 1522
>UniRef100_UPI00001D02C6 UPI00001D02C6 UniRef100 entry
Length = 1627
Score = 33.5 bits (75), Expect = 0.97
Identities = 29/99 (29%), Positives = 39/99 (39%), Gaps = 13/99 (13%)
Query: 16 GAAGTEAEAAAAAEGMEAAT---ARTAEAGGGEGFERSSRSRLCREVAECGQYINRYKSL 72
G+ + ++A AEGMEA T A E G FE S+ +C + + L
Sbjct: 1432 GSLQGQVSSSATAEGMEALTKVLAELREGDIGSSFEAISK--------QCRAFFDNESEL 1483
Query: 73 LPLRVFVFTAPSKRTAVKSSCHL--NRCKRGAVKALFWC 109
L L+ FV + S H KRG V L C
Sbjct: 1484 LRLKAFVLFGRLAKVVGISKKHFFKGEVKRGWVSLLLHC 1522
>UniRef100_Q7XGM7 Hypothetical protein [Oryza sativa]
Length = 258
Score = 33.5 bits (75), Expect = 0.97
Identities = 24/86 (27%), Positives = 37/86 (42%)
Query: 6 QEATQNKRGSGAAGTEAEAAAAAEGMEAATARTAEAGGGEGFERSSRSRLCREVAECGQY 65
Q A + G A+G + EA A++E M AR E G +S +C EV E +
Sbjct: 58 QAARGREDGEKASGEDEEALASSERMRPLPARIVETWGAGAAAAASGEDVCGEVTEVAEG 117
Query: 66 INRYKSLLPLRVFVFTAPSKRTAVKS 91
R + RV + ++ A +S
Sbjct: 118 SGRRRERSRRRVRAQPSAARTLAGRS 143
>UniRef100_Q75KL2 Hypothetical protein OJ1264_A04.16 [Oryza sativa]
Length = 482
Score = 33.5 bits (75), Expect = 0.97
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 15 SGAAGTEAEAAAAAEGMEAATARTAEAGGGEGFERSSRSRLCREVAECGQ 64
+G + T A A A + A+A + GGG R SR+R+C AE G+
Sbjct: 399 TGRSATTACARAGGAAIWVASAGSGGEGGGRSARRGSRARVCSARAEWGR 448
>UniRef100_Q8S7I0 Hypothetical protein OSJNBa0010I09.13 [Oryza sativa]
Length = 266
Score = 33.5 bits (75), Expect = 0.97
Identities = 23/58 (39%), Positives = 28/58 (47%), Gaps = 5/58 (8%)
Query: 1 MATTVQEATQNKRGSGAAGTEAEAAAAAEGMEAATARTAEA----GGGEGFERSSRSR 54
++ +EA + +RG G EAAA G EAA AR A GGGE R R R
Sbjct: 90 VSAAAEEARRRRRGERGGGG-GEAAARQGGGEAAVARRARRRTRRGGGEAGRRQERRR 146
>UniRef100_Q655C0 Seed specific protein, 5'-partial-like protein [Oryza sativa]
Length = 361
Score = 33.1 bits (74), Expect = 1.3
Identities = 19/60 (31%), Positives = 29/60 (47%)
Query: 5 VQEATQNKRGSGAAGTEAEAAAAAEGMEAATARTAEAGGGEGFERSSRSRLCREVAECGQ 64
++E + +R + +A EAE A+ E A +A GG E S RL R +A G+
Sbjct: 187 LEELEKERRAAASAADEAELEQEADAEEDECAAAGDANGGGAEEGGSMERLRRRLAAEGR 246
>UniRef100_UPI00001CF854 UPI00001CF854 UniRef100 entry
Length = 958
Score = 32.7 bits (73), Expect = 1.7
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 13 RGSGAAGTEAEAAAAAEGMEAATARTA--EAGGGEGFERSSRSRLCREVAECGQYINRYK 70
R S +AG EA ++ G+ T R E GGG G E + RL + ++ N+ K
Sbjct: 7 RVSSSAGIWVEARVSSSGIVPPTRRRRWPENGGGNGLEPNLTGRLGTSAEQDNRFSNKQK 66
Query: 71 SLL 73
LL
Sbjct: 67 KLL 69
>UniRef100_UPI000032AC92 UPI000032AC92 UniRef100 entry
Length = 272
Score = 32.7 bits (73), Expect = 1.7
Identities = 19/56 (33%), Positives = 26/56 (45%), Gaps = 1/56 (1%)
Query: 6 QEATQNKRGSGAAGTEAEAAAAAEGMEAATARTAEAGGGEGFERSSRSRLCREVAE 61
Q A + G GA G + AA A+G A GGG+G E + R R+ A+
Sbjct: 53 QAADGARHGGGARGAQGRAAGPADGGHGREEPAARGGGGDG-EAAQPRRAARQRAQ 107
>UniRef100_Q6Z219 Hypothetical protein B1111C03.11 [Oryza sativa]
Length = 78
Score = 32.7 bits (73), Expect = 1.7
Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
Query: 3 TTVQEATQNKRGSGAAGTEAEAAAAAEGMEAATARTAEAGGGEGFERSSRSRLCREVAEC 62
TT++ + KRG A + EA A + A R A GGGEG RL R AEC
Sbjct: 12 TTIELSPATKRG---AAPQLEAERATKRGAALGRRGAAVGGGEG---DGEGRLKRRTAEC 65
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.316 0.129 0.371
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 214,665,175
Number of Sequences: 2790947
Number of extensions: 7405305
Number of successful extensions: 39883
Number of sequences better than 10.0: 110
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 59
Number of HSP's that attempted gapping in prelim test: 39225
Number of HSP's gapped (non-prelim): 522
length of query: 152
length of database: 848,049,833
effective HSP length: 128
effective length of query: 24
effective length of database: 490,808,617
effective search space: 11779406808
effective search space used: 11779406808
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 67 (30.4 bits)
Lotus: description of TM0023.12