BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0018.1
         (127 letters)

Database: uniref100 
           2,790,947 sequences; 848,049,833 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

UniRef100_Q8LG23 RNA-binding protein, putative [Arabidopsis thal...    76  2e-13
UniRef100_Q9C8K3 RNA-binding protein, putative; 35994-37391 [Ara...    75  3e-13
UniRef100_Q6ATR0 Putative RNA binding motif protein [Oryza sativa]     64  1e-09
UniRef100_Q75KH5 Hypothetical protein OJ1489_G03.1 [Oryza sativa]      63  1e-09
UniRef100_Q84LL8 Salt tolerance protein 4 [Beta vulgaris]              57  7e-08
UniRef100_UPI00001A08B4 UPI00001A08B4 UniRef100 entry                  54  6e-07
UniRef100_UPI000035F04F UPI000035F04F UniRef100 entry                  52  3e-06
UniRef100_UPI000031883B UPI000031883B UniRef100 entry                  52  4e-06
UniRef100_Q8JJC6 RNA binding motif protein 8 [Oryzias latipes]         52  4e-06
UniRef100_Q9DF42 RNA-binding protein Y14 [Xenopus laevis]              51  7e-06
UniRef100_Q6PH90 MGC68591 protein [Xenopus laevis]                     51  7e-06
UniRef100_Q641U1 Hypothetical protein [Xenopus laevis]                 51  7e-06
UniRef100_Q9Y5S9 RNA-binding protein 8A [Homo sapiens]                 51  7e-06
UniRef100_UPI000043458C UPI000043458C UniRef100 entry                  50  9e-06
UniRef100_Q7Q5L6 ENSANGP00000013045 [Anopheles gambiae str. PEST]      50  1e-05
UniRef100_Q6DTK7 RNA binding motif protein 8B [Equus caballus]         50  1e-05
UniRef100_Q60YV2 Hypothetical protein CBG18074 [Caenorhabditis b...    50  1e-05
UniRef100_Q9V535 RNA-binding protein 8A [Drosophila melanogaster]      49  2e-05
UniRef100_Q21832 Hypothetical protein R07E5.14 [Caenorhabditis e...    49  3e-05
UniRef100_Q8IM34 RNA binding protein, putative [Plasmodium falci...    47  7e-05

>UniRef100_Q8LG23 RNA-binding protein, putative [Arabidopsis thaliana]
          Length = 202

 Score = 75.9 bits (185), Expect = 2e-13
 Identities = 37/53 (69%), Positives = 45/53 (84%), Gaps = 1/53 (1%)

Query: 1   GYALIEYERAEEAKNAIENLNGSELLTQNIYVDWAFSSGPI-NESIRRKNARH 52
           GYALIEYE+ EEA++AI  +NG+ELLTQN+ VDWAFSSGP   ES RRKN+R+
Sbjct: 137 GYALIEYEKKEEAQSAISAMNGAELLTQNVSVDWAFSSGPSGGESYRRKNSRY 189


>UniRef100_Q9C8K3 RNA-binding protein, putative; 35994-37391 [Arabidopsis thaliana]
          Length = 191

 Score = 75.1 bits (183), Expect = 3e-13
 Identities = 37/52 (71%), Positives = 44/52 (84%), Gaps = 1/52 (1%)

Query: 1   GYALIEYERAEEAKNAIENLNGSELLTQNIYVDWAFSSGPI-NESIRRKNAR 51
           GYALIEYE+ EEA++AI  +NG+ELLTQN+ VDWAFSSGP   ES RRKN+R
Sbjct: 137 GYALIEYEKKEEAQSAISAMNGAELLTQNVSVDWAFSSGPSGGESYRRKNSR 188


>UniRef100_Q6ATR0 Putative RNA binding motif protein [Oryza sativa]
          Length = 197

 Score = 63.5 bits (153), Expect = 1e-09
 Identities = 27/43 (62%), Positives = 36/43 (82%)

Query: 1   GYALIEYERAEEAKNAIENLNGSELLTQNIYVDWAFSSGPINE 43
           GYAL+EYE  EEA+ AI+ +NG++LLT+ +YVDWAFS GPI +
Sbjct: 132 GYALVEYESFEEAQTAIKAMNGTQLLTRTVYVDWAFSRGPIQK 174


>UniRef100_Q75KH5 Hypothetical protein OJ1489_G03.1 [Oryza sativa]
          Length = 116

 Score = 63.2 bits (152), Expect = 1e-09
 Identities = 32/52 (61%), Positives = 42/52 (80%), Gaps = 1/52 (1%)

Query: 1   GYALIEYERAEEAKNAIENLNGSELLTQNIYVDWAFSSGPI-NESIRRKNAR 51
           GYALIEYE  EEA+ AI+ L+G+ELLTQ I VDWAFS+GP+   +IR+++ R
Sbjct: 55  GYALIEYETFEEAQAAIKALDGTELLTQIISVDWAFSNGPVKRRNIRKRSPR 106


>UniRef100_Q84LL8 Salt tolerance protein 4 [Beta vulgaris]
          Length = 203

 Score = 57.4 bits (137), Expect = 7e-08
 Identities = 29/51 (56%), Positives = 37/51 (71%), Gaps = 3/51 (5%)

Query: 1   GYALIEYERAEEAKNAIENLNGSELLTQNIYVDWAFSSGPINESIRRKNAR 51
           GYALIEYE+ EEA+ AI+ +NG+++L Q I VDWAF +GP     RR N R
Sbjct: 141 GYALIEYEKFEEAQAAIKEMNGAKMLEQPINVDWAFCNGPYR---RRGNRR 188


>UniRef100_UPI00001A08B4 UPI00001A08B4 UniRef100 entry
          Length = 174

 Score = 54.3 bits (129), Expect = 6e-07
 Identities = 28/55 (50%), Positives = 35/55 (62%), Gaps = 2/55 (3%)

Query: 1   GYALIEYERAEEAKNAIENLNGSELLTQNIYVDWAFSSGPINESIR--RKNARHP 53
           GYAL+EYE  +EA+ A+E LNG EL+ Q I VDW F  GP     R  R+ +R P
Sbjct: 115 GYALVEYETYKEAQAAMEGLNGQELMGQPISVDWCFVRGPPKSKRRGGRRRSRSP 169


>UniRef100_UPI000035F04F UPI000035F04F UniRef100 entry
          Length = 173

 Score = 52.0 bits (123), Expect = 3e-06
 Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 3/56 (5%)

Query: 1   GYALIEYERAEEAKNAIENLNGSELLTQNIYVDWAFSSGPINESIR---RKNARHP 53
           GYAL+EYE  +EA+ A+E LNG +++ Q I VDW F  GP     R   R+ +R P
Sbjct: 113 GYALVEYETYKEAQAAMEGLNGQDMMGQPISVDWGFVRGPPKNKRRTGGRRRSRSP 168


>UniRef100_UPI000031883B UPI000031883B UniRef100 entry
          Length = 175

 Score = 51.6 bits (122), Expect = 4e-06
 Identities = 22/40 (55%), Positives = 30/40 (75%)

Query: 1   GYALIEYERAEEAKNAIENLNGSELLTQNIYVDWAFSSGP 40
           GYAL+EYE  +EA+ A+E LNG +++ Q+I VDW F  GP
Sbjct: 115 GYALVEYETYKEAQAAMEGLNGQDMMGQSISVDWGFVRGP 154


>UniRef100_Q8JJC6 RNA binding motif protein 8 [Oryzias latipes]
          Length = 173

 Score = 51.6 bits (122), Expect = 4e-06
 Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 3/56 (5%)

Query: 1   GYALIEYERAEEAKNAIENLNGSELLTQNIYVDWAFSSGPINESIR---RKNARHP 53
           GYAL+EYE  +EA+ A+E LN  +L+ Q + VDWAF  GP     R   R+ +R P
Sbjct: 113 GYALVEYETYKEAQAAMEGLNAQDLMGQPVSVDWAFVRGPPKNKRRTGGRRRSRSP 168


>UniRef100_Q9DF42 RNA-binding protein Y14 [Xenopus laevis]
          Length = 174

 Score = 50.8 bits (120), Expect = 7e-06
 Identities = 26/55 (47%), Positives = 34/55 (61%), Gaps = 2/55 (3%)

Query: 1   GYALIEYERAEEAKNAIENLNGSELLTQNIYVDWAFSSGPINESIR--RKNARHP 53
           GYAL+EYE  +EA  A+E LNG +L+ Q + VDW F  GP     R  R+ +R P
Sbjct: 115 GYALVEYETYKEALAAMEGLNGQDLMGQPVSVDWGFVRGPPKGKRRSGRRRSRSP 169


>UniRef100_Q6PH90 MGC68591 protein [Xenopus laevis]
          Length = 174

 Score = 50.8 bits (120), Expect = 7e-06
 Identities = 26/55 (47%), Positives = 34/55 (61%), Gaps = 2/55 (3%)

Query: 1   GYALIEYERAEEAKNAIENLNGSELLTQNIYVDWAFSSGPINESIR--RKNARHP 53
           GYAL+EYE  +EA  A+E LNG +L+ Q + VDW F  GP     R  R+ +R P
Sbjct: 115 GYALVEYETYKEALAAMEGLNGQDLMGQPVSVDWGFVRGPPKGKRRSGRRRSRSP 169


>UniRef100_Q641U1 Hypothetical protein [Xenopus laevis]
          Length = 173

 Score = 50.8 bits (120), Expect = 7e-06
 Identities = 26/55 (47%), Positives = 34/55 (61%), Gaps = 2/55 (3%)

Query: 1   GYALIEYERAEEAKNAIENLNGSELLTQNIYVDWAFSSGPINESIR--RKNARHP 53
           GY L+EYE  +EA+ A+E LNG +L+ Q I VDW F  GP     R  R+ +R P
Sbjct: 114 GYTLVEYETYKEAQAAMEGLNGQDLMGQPISVDWCFVRGPPKGKRRGGRRRSRSP 168


>UniRef100_Q9Y5S9 RNA-binding protein 8A [Homo sapiens]
          Length = 174

 Score = 50.8 bits (120), Expect = 7e-06
 Identities = 26/55 (47%), Positives = 34/55 (61%), Gaps = 2/55 (3%)

Query: 1   GYALIEYERAEEAKNAIENLNGSELLTQNIYVDWAFSSGPINESIR--RKNARHP 53
           GY L+EYE  +EA+ A+E LNG +L+ Q I VDW F  GP     R  R+ +R P
Sbjct: 115 GYTLVEYETYKEAQAAMEGLNGQDLMGQPISVDWCFVRGPPKGKRRGGRRRSRSP 169


>UniRef100_UPI000043458C UPI000043458C UniRef100 entry
          Length = 56

 Score = 50.4 bits (119), Expect = 9e-06
 Identities = 25/51 (49%), Positives = 36/51 (70%), Gaps = 2/51 (3%)

Query: 1  GYALIEYERAEEAKNAIENLNGSELLTQNIYVDWAFSSGPINESIRRKNAR 51
          GYAL+EYE  +EA+ A + LNG+E+L Q I VDW F  GP  + I++++ R
Sbjct: 6  GYALVEYETFKEAQAAKDALNGTEILGQPISVDWCFVKGP--KKIKKRSHR 54


>UniRef100_Q7Q5L6 ENSANGP00000013045 [Anopheles gambiae str. PEST]
          Length = 163

 Score = 50.1 bits (118), Expect = 1e-05
 Identities = 24/40 (60%), Positives = 28/40 (70%)

Query: 1   GYALIEYERAEEAKNAIENLNGSELLTQNIYVDWAFSSGP 40
           GYAL+EYE  ++A  A E LNGSE+L Q I VDW F  GP
Sbjct: 113 GYALVEYETYKQALAAKEALNGSEVLGQTIAVDWCFVKGP 152


>UniRef100_Q6DTK7 RNA binding motif protein 8B [Equus caballus]
          Length = 133

 Score = 49.7 bits (117), Expect = 1e-05
 Identities = 22/40 (55%), Positives = 28/40 (70%)

Query: 1   GYALIEYERAEEAKNAIENLNGSELLTQNIYVDWAFSSGP 40
           GY L+EYE  +EA+ A+E LNG +L+ Q I VDW F  GP
Sbjct: 86  GYTLVEYETYKEAQAAMEGLNGQDLMGQPISVDWCFVRGP 125


>UniRef100_Q60YV2 Hypothetical protein CBG18074 [Caenorhabditis briggsae]
          Length = 142

 Score = 49.7 bits (117), Expect = 1e-05
 Identities = 22/39 (56%), Positives = 27/39 (68%)

Query: 1   GYALIEYERAEEAKNAIENLNGSELLTQNIYVDWAFSSG 39
           GYAL+EYE  +EA  AIE  N ++LL QN+ VDW F  G
Sbjct: 97  GYALVEYETQKEASEAIEKSNDTDLLGQNVKVDWCFIKG 135


>UniRef100_Q9V535 RNA-binding protein 8A [Drosophila melanogaster]
          Length = 165

 Score = 49.3 bits (116), Expect = 2e-05
 Identities = 24/50 (48%), Positives = 34/50 (68%), Gaps = 2/50 (4%)

Query: 1   GYALIEYERAEEAKNAIENLNGSELLTQNIYVDWAFSSGP--INESIRRK 48
           GYAL+EYE  ++A  A E LNG+E++ Q I VDW F  GP  + +S +R+
Sbjct: 115 GYALVEYETHKQALAAKEALNGAEIMGQTIQVDWCFVKGPKRVKKSEKRR 164


>UniRef100_Q21832 Hypothetical protein R07E5.14 [Caenorhabditis elegans]
          Length = 142

 Score = 48.5 bits (114), Expect = 3e-05
 Identities = 21/39 (53%), Positives = 27/39 (68%)

Query: 1   GYALIEYERAEEAKNAIENLNGSELLTQNIYVDWAFSSG 39
           GYAL+EYE  +EA  AI+  N ++LL QN+ VDW F  G
Sbjct: 97  GYALVEYETQKEANEAIDQSNDTDLLGQNVKVDWCFVKG 135


>UniRef100_Q8IM34 RNA binding protein, putative [Plasmodium falciparum]
          Length = 107

 Score = 47.4 bits (111), Expect = 7e-05
 Identities = 20/36 (55%), Positives = 27/36 (74%)

Query: 1   GYALIEYERAEEAKNAIENLNGSELLTQNIYVDWAF 36
           GYA +EYE   +AK AI+ ++G+ LL Q I+VDWAF
Sbjct: 65  GYAFLEYENFVDAKRAIDEMDGTMLLNQEIHVDWAF 100


  Database: uniref100
    Posted date:  Jan 5, 2005  1:24 AM
  Number of letters in database: 848,049,833
  Number of sequences in database:  2,790,947
  
Lambda     K      H
   0.323    0.141    0.441 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 219,237,502
Number of Sequences: 2790947
Number of extensions: 8537389
Number of successful extensions: 21695
Number of sequences better than 10.0: 635
Number of HSP's better than 10.0 without gapping: 542
Number of HSP's successfully gapped in prelim test: 93
Number of HSP's that attempted gapping in prelim test: 20629
Number of HSP's gapped (non-prelim): 1158
length of query: 127
length of database: 848,049,833
effective HSP length: 103
effective length of query: 24
effective length of database: 560,582,292
effective search space: 13453975008
effective search space used: 13453975008
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 67 (30.4 bits)