BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0009.7
         (1310 letters)

Database: uniref100 
           2,790,947 sequences; 848,049,833 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

UniRef100_O82276 Putative non-LTR retroelement reverse transcrip...   333  3e-89
UniRef100_Q7XNY0 OSJNBb0015N08.11 protein [Oryza sativa]              317  2e-84
UniRef100_Q8LMT3 Putative retroelement [Oryza sativa]                 315  8e-84
UniRef100_Q9SKJ4 Putative non-LTR retroelement reverse transcrip...   312  4e-83
UniRef100_Q9SIQ5 Putative non-LTR retroelement reverse transcrip...   312  5e-83
UniRef100_Q7XJS2 Putative non-LTR retroelement reverse transcrip...   303  2e-80
UniRef100_Q9FYJ4 F17F8.5 [Arabidopsis thaliana]                       301  1e-79
UniRef100_Q9LVQ1 Non-LTR retroelement reverse transcriptase-like...   298  7e-79
UniRef100_Q9M1F2 Hypothetical protein F9K21.130 [Arabidopsis tha...   296  3e-78
UniRef100_Q9SJ38 Putative non-LTR retroelement reverse transcrip...   293  2e-77
UniRef100_Q9ZUF0 Putative non-LTR retroelement reverse transcrip...   290  2e-76
UniRef100_Q8LJX1 Putative reverse transcriptase [Sorghum bicolor]     288  6e-76
UniRef100_O81068 Putative non-LTR retroelement reverse transcrip...   287  1e-75
UniRef100_Q9C6L3 Hypothetical protein F2J7.11 [Arabidopsis thali...   286  3e-75
UniRef100_O22220 Putative non-LTR retroelement reverse transcrip...   285  6e-75
UniRef100_O82216 Putative non-LTR retroelement reverse transcrip...   282  5e-74
UniRef100_Q9FZG5 T2E6.4 [Arabidopsis thaliana]                        281  1e-73
UniRef100_Q9FL83 Non-LTR retroelement reverse transcriptase-like...   275  5e-72
UniRef100_Q75M12 Hypothetical protein P0676G05.2 [Oryza sativa]       274  1e-71
UniRef100_Q9M1N9 Hypothetical protein T18B22.50 [Arabidopsis tha...   272  6e-71

>UniRef100_O82276 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1231

 Score =  333 bits (853), Expect = 3e-89
 Identities = 247/920 (26%), Positives = 415/920 (44%), Gaps = 84/920 (9%)

Query: 413  DFFSSGRISRGMNAAFITLIPKKENASSLNHYRPISLIRSSYKLIAKVLATRLQKVMPKL 472
            +FF +G +    N A + LI K      +  +RP+SL    +K+I K++ TRL+ V+ KL
Sbjct: 337  EFFETGVLPASTNDALLVLIAKVAKPERIQQFRPVSLCNVLFKIITKMMVTRLKNVISKL 396

Query: 473  LSQNQFAFTKERQIADCILLANEVADFLSKKS--EGGLMLKVDLAKAYDQVDWEFLINML 530
            +   Q +F   R   D I+L  E    + +K   +G ++LK+DL KAYD+V W+FL   L
Sbjct: 397  IGPAQASFIPGRLSIDNIVLVQEAVHSMRRKKGRKGWMLLKLDLEKAYDRVRWDFLQETL 456

Query: 531  HEMNFGDKWISWMKSCISSASLAILVNGSPTDFFSIEKGLRQGDPLSPLLFNLCLNGLSC 590
                  + W S + + ++  S+++L NG  TD F   +GLRQGDPLSP LF LCL  L  
Sbjct: 457  EAAGLSEGWTSRIMAGVTDPSMSVLWNGERTDSFVPARGLRQGDPLSPYLFVLCLERLCH 516

Query: 591  LLNQFLGEENYCGVRIS-RNLTINHLLFADDTLLFCENNELQLETLCNVLITFLFASGLK 649
            L+   +G+  +  + +S     ++H+ FADD +LF E +  Q+  +  VL  F  ASG K
Sbjct: 517  LIEASVGKREWKPIAVSCGGSKLSHVCFADDLILFAEASVAQIRIIRRVLERFCEASGQK 576

Query: 650  VNNQKSELIGCNVQTVEVERLAHSFGWSVGTLPI-SYLGAPLGGNPRRIVFWNPMLEKLK 708
            V+ +KS++   +  + E+E+L         T  +  YLG P+         +  +LE++ 
Sbjct: 577  VSLEKSKIFFSHNVSREMEQLISEESGIGCTKELGKYLGMPILQKRMNKETFGEVLERVS 636

Query: 709  CKTRSYNSKFMSLSGRLVITKSVLCSIPLFLMVVFKAPKGVILEVEKLFHAFIWGQEQGR 768
             +   +  + +SL+GR+ +TK+VL SIP+ +M     P   +  +++    F+WG    +
Sbjct: 637  ARLAGWKGRSLSLAGRITLTKAVLSSIPVHVMSAILLPVSTLDTLDRYSRTFLWGSTMEK 696

Query: 769  KKINWIGWDQICLNRKAGGLGLGFIEWRNRGLLLKWAWRFGREINSLWRFFVIERYNLDP 828
            KK + + W +IC  +  GG+GL      N+ L+ K  WR  ++  SLW   V ++Y    
Sbjct: 697  KKQHLLSWRKICKPKAEGGIGLRSARDMNKALVAKVGWRLLQDKESLWARVVRKKYK--- 753

Query: 829  DSLIWHMASTTPAMGSRAIQDIWRVLNEDHSLSAGFKENLLISI----GDGSRVKFWRDP 884
               +  +  T+           WR      S++ G +E ++  +    GDG  ++FW D 
Sbjct: 754  ---VGGVQDTSWLKPQPRWSSTWR------SVAVGLREVVVKGVGWVPGDGCTIRFWLDR 804

Query: 885  WVSNVALCHLFPRLYAMSENKEARIAEVGTYSRGKWGWSLTFRGQFFAWEEELYQQFLAS 944
            W+    L  L   +    E    RI     Y     GW+L   G +     E  ++ L S
Sbjct: 805  WLLQEPLVELGTDMIPEGE----RIKVAADYWLPGSGWNLEILGLYL---PETVKRRLLS 857

Query: 945  INHIIPAAVG-GDQLIWCANQTGLFSVKELCYWLEDHL--------FTHQMWQVPKSIAK 995
            +  ++   +G GD++ W   Q G F+V+     L+  +        F +++W++      
Sbjct: 858  V--VVQVFLGNGDEISWKGTQDGAFTVRSAYSLLQGDVGDRPNMGSFFNRIWKL------ 909

Query: 996  LLPPKVALFFWQAQNDKIATRANLLARGIDLNGSTQCLFCNAFDESCNHIFLHCHSIWSL 1055
            + P +V +F W    + I T    + R +  N    C  CN  +E+  H+   C ++  +
Sbjct: 910  ITPERVRVFIWLVSQNVIMTNVERVRRHLSENAI--CSVCNGAEETILHVLRDCPAMEPI 967

Query: 1056 WCVIVNRERFLWVMPASLADLILEWDFLPKISDKSLWSLIPYALSWSIWIERNNICFNHK 1115
            W  ++   R       SL    LEW F      K +W  +     W  W  R    F  +
Sbjct: 968  WRRLLPLRRHHEFFSQSL----LEWLFTNMDPVKGIWPTLFGMGIWWAWKWRCCDVFGER 1023

Query: 1116 AL----------NISEIWDFHLLRIGWWTHELLRQNSYSIDQLSRNFESIRFASKPSLLR 1165
             +             E+   H+  +G       R N   ++++ R               
Sbjct: 1024 KICRDRLKFIKDMAEEVRRVHVGAVG------NRPNGVRVERMIR--------------- 1062

Query: 1166 AASWVTPDAGLIKINVDGAAKGSPGRCGIGGILRNNANVILGFFSKSVGEGYAFEAEVLA 1225
               W  P  G +KI  DGA++G+ G    GG +RN     LG F+ ++G   A  AE+  
Sbjct: 1063 ---WQVPSDGWVKITTDGASRGNHGLAAAGGAIRNGQGEWLGGFALNIGSCAAPLAELWG 1119

Query: 1226 IHEALLFCVQRQLRNIIIESDSSLAVGWVNNRCNRPWKLLNKLNQIDRWLVETNCLKVNH 1285
             +  LL    +  R + ++ D  L VG+++   +    L   +     +      ++V+H
Sbjct: 1120 AYYGLLIAWDKGFRRVELDLDCKLVVGFLSTGVSNAHPLSFLVRLCQGFFTRDWLVRVSH 1179

Query: 1286 IYREANGEADKLAKRGAEYP 1305
            +YREAN  AD LA      P
Sbjct: 1180 VYREANRLADGLANYAFTLP 1199


>UniRef100_Q7XNY0 OSJNBb0015N08.11 protein [Oryza sativa]
          Length = 1026

 Score =  317 bits (812), Expect = 2e-84
 Identities = 218/706 (30%), Positives = 340/706 (47%), Gaps = 45/706 (6%)

Query: 424  MNAAFITLIPKKENASSLNHYRPISLIRSSYKLIAKVLATRLQKVMPKLLSQNQFAFTKE 483
            +N   ITLIPK ++AS +  +RPI L+  S+K+I KVL  RL   M  ++S+ Q AF K 
Sbjct: 295  LNFGVITLIPKTKDASQIQKFRPICLLNVSFKIITKVLMNRLNGTMAYIISKQQTAFLKN 354

Query: 484  RQIADCILLANEVADFLSKKSEGGLMLKVDLAKAYDQVDWEFLINMLHEMNFGDKWISWM 543
            R I + +++ +EV + + +K + G++ KVD  KAYD+V+W F+  ML    F D+W  W+
Sbjct: 355  RFIMEGVVILHEVLNSIHQKKQSGILFKVDFEKAYDKVNWVFIYRMLKAKGFPDQWCDWI 414

Query: 544  KSCISSASLAILVNGSPTDFFSIEKGLRQGDPLSPLLFNLCLNGLSCLLNQFLGEENYC- 602
               +    +A+ VN     FF   KGLRQGDPLSPLLFNL    L+ L+ +   EEN   
Sbjct: 415  MKVVMGGKVAVKVNDQIGSFFKTHKGLRQGDPLSPLLFNLAAEALTLLVQR--AEENSLI 472

Query: 603  -GVRISRNLTINHLLFADDTLLFCENNELQLETLCNVLITFLFASGLKVNNQKSELIGCN 661
             G+  + +  I  L +ADDT+    +     + L  +L  F   SGLK+N  KSE+    
Sbjct: 473  EGLGTNGDNKIAILQYADDTIFLINDKLDHAKNLKYILCLFEQLSGLKINFNKSEVFCFG 532

Query: 662  VQTVEVERLAHSFGWSVGTLPISYLGAPLGGNPRRIV--FWNPMLEKLKCKTRSYNSKFM 719
                + +  ++ F   VG+LP+ YLG P+  + +RI+   W     K++ K   +  +  
Sbjct: 533  EAKEKQDLYSNIFTCKVGSLPLKYLGIPI--DQKRILNKDWKLAENKMEHKLGCWQGRLQ 590

Query: 720  SLSGRLVITKSVLCSIPLFLMVVFKAPKGVILEVEKLFHAFIWGQEQGRKKINWIGWDQI 779
            S+ GRL++  S L S+P++++  ++ PKGV   ++     F+W ++QG +K + + W  +
Sbjct: 591  SIGGRLILLNSTLSSVPMYMISFYRLPKGVQERIDYFRKRFLWQEDQGIRKYHLVNWPLV 650

Query: 780  CLNRKAGGLGLGFIEWRNRGLLLKWAWRFGREINSLWRFFVIERYNLDPDSLIWHMASTT 839
            C  R  GGLG+  +E  N+ +L KW WR   E    W+  +  +Y            S  
Sbjct: 651  CSPRDQGGLGVLDLEAMNKAMLGKWIWRLENE-EGWWQEIIYAKY-----------CSDK 698

Query: 840  PAMGSR---AIQDIWRVLNEDHSLSAGFKENLLISIGDGSRVKFWRDPWVSNVALCHLFP 896
            P  G R        W+ + E       F   +   +G+G +  FW D W+    L   FP
Sbjct: 699  PLSGLRLKAGSSHFWQGVMEVKDDFFSFCTKI---VGNGEKTLFWEDSWLGGKPLAIQFP 755

Query: 897  RLYAMSENKEARIAEVGTYSRGKWGWSLTFRGQFFAWEEELYQQFLASINHIIPAAVGGD 956
             LY +   K   IA++      K    + FR      +   +++ + S   +       D
Sbjct: 756  SLYGIVITKRITIADLNR----KGIDCMKFRRDLHGDKLRDWRKIVNSWEGLNLVENCKD 811

Query: 957  QLIWCANQTGLFSVKELCYWLEDHLFTHQMWQVPKSIAKL-LPPKVALFFWQAQNDKIAT 1015
            +L W  ++ G F+V+     L+      Q     K I K  +P K+ +F W    +KI T
Sbjct: 812  KLWWTLSKDGKFTVRSFYRALK----LQQTSFPNKKIWKFRVPLKIRIFIWFFTKNKILT 867

Query: 1016 RANLLARGIDLNGSTQCLFCNAFDESCNHIFLHC---HSIWSLWCVIVNRERFLWVMPAS 1072
            + NLL RG    G  +C FC+   E+  H+F  C     IW++    +N +  L     S
Sbjct: 868  KDNLLKRGW-RKGDNKCQFCDKV-ETVQHLFFDCPLARLIWNIIACALNVKPVL-----S 920

Query: 1073 LADLILEWDFLPKISDKSLWSLIPYALSWSIWIERNNICFNHKALN 1118
              DL   W        K+L  +   A+ WSIW  RN  CF  K  N
Sbjct: 921  RQDLFGSWIQSMDKFTKNLVIVGIAAVLWSIWKCRNKACFERKLPN 966


>UniRef100_Q8LMT3 Putative retroelement [Oryza sativa]
          Length = 764

 Score =  315 bits (806), Expect = 8e-84
 Identities = 212/710 (29%), Positives = 341/710 (47%), Gaps = 60/710 (8%)

Query: 422  RGMNAAFITLIPKKENASSLNHYRPISLIRSSYKLIAKVLATRLQKVMPKLLSQNQFAFT 481
            R +N   ITLIPK ++A+++  +RPI L+   +K + K+L  RL ++  K++ ++Q AF 
Sbjct: 29   RRLNYGVITLIPKVKDANTIKSFRPICLLNVCFKFLTKILTRRLSEIAQKVIGESQTAFI 88

Query: 482  KERQIADCILLANEVADFLSKKSEGGLMLKVDLAKAYDQVDWEFLINMLHEMNFGDKWIS 541
              RQ  D +++ +EV   L K+ + G++ K+D  KAYD+V W FL ++LH+  F D+WI 
Sbjct: 89   PGRQNLDGVVILHEVLHELKKEKKSGIIFKLDFEKAYDKVQWSFLFDVLHKKGFSDRWIQ 148

Query: 542  WMKSCISSASLAILVNGSPTDFFSIEKGLRQGDPLSPLLFNLCLNGLSCLLNQFLGEENY 601
            W+K       +A+ +NG   DFF   +G+RQGDPLSPLLFNL  + LS +LN     +  
Sbjct: 149  WVKMATIGGKMAVNINGEVKDFFKTYRGVRQGDPLSPLLFNLVADALSEMLN---NAKQA 205

Query: 602  CGVRISRNLTINHLLFADDTLLFCENNELQLETLCNVLITFLFASGLKVNNQKSELIGCN 661
                +   LT  HL +ADDT+LF  N E  + T+  +L  +   SGLK+N QKSE++   
Sbjct: 206  VPHLVPGGLT--HLQYADDTILFMTNTEENIVTVKFLLYCYEAMSGLKINYQKSEIMVIG 263

Query: 662  VQTVEVERLAHSFGWSVGTLPISYLGAPLGGNPRRIVFWNPMLEKLKCKTRSYNSKFMSL 721
               +E +R+A  F    G +P +YLG P+  N       +    K++ +  ++   ++S 
Sbjct: 264  GDEMETQRVADLFNCQAGKMPFTYLGIPISMNKLTNADLDIPPNKIEKRLATWKCGYLSY 323

Query: 722  SGRLVITKSVLCSIPLFLMVVFKAPKGVILEVEKLFHAFIWGQEQGRKKINWIGWDQICL 781
             G+ ++  S L SIPL++M V+  P+GV  +++ +   F W   + ++K + I W+ +C 
Sbjct: 324  GGKAILINSCLSSIPLYMMGVYLLPEGVHNKMDSIRARFFWEGLEKKRKYHMIKWEALCR 383

Query: 782  NRKAGGLGLGFIEWR--NRGLLLKWAWRFGREINSLWRFFVIERYNLDPDSLIWHMASTT 839
             ++ G  GLGFI+ R  N  LL KW +R            +  +Y  D        A  +
Sbjct: 384  PKEFG--GLGFIDTRKMNIALLCKWIYRLESGKEDPCCVLLRNKYMKDGGGFFQSKAEES 441

Query: 840  PAMGSRAIQDIWRVLNEDH---SLSAGFKENLLISIGDGSRVKFWRDPWVSNVALCHLFP 896
                       W+ L+E      L + +K      +G+G    FW D W+    L   +P
Sbjct: 442  --------SQFWKGLHEVKKWMDLGSSYK------VGNGKATNFWSDVWIGETPLKTQYP 487

Query: 897  RLYAMSENKEARIAEVGTYSRGKWGWSLTFRGQFFAWEEELYQQFLASIN--HIIPAAV- 953
             +Y M  +KE  ++++     G W         +      L ++ L   N  H  P  + 
Sbjct: 488  NIYRMCADKEKTVSQM--CLEGDW---------YIELRRSLGERDLNEWNDLHNTPREIH 536

Query: 954  ---GGDQLIWCANQTGLFSVKELCYWLE----DHLFTHQMWQVPKSIAKLLPPKVALFFW 1006
                 D +IW   + G +  K L   L            +W+        +P KV + FW
Sbjct: 537  LKEERDCIIWKLTKNGFYKAKTLYQALSFGGVKDKVMQDLWR------SSIPLKVKILFW 590

Query: 1007 QAQNDKIATRANLLARGIDLNGSTQCLFCNAFDESCNHIFLHCHSIWSLWCVIVNRERFL 1066
                 +I     L  + +  +GS  C  C    E  +H+   CH    +WC    R+ F 
Sbjct: 591  LMLKGRIQAAGQL--KKMKWSGSPNCKLCGQ-TEDVDHLMFRCHISQFMWCCY--RDAFG 645

Query: 1067 W-VMPASLADLILEWDFLPKISDKSLWSLIPYALSWSIWIERNNICFNHK 1115
            W  +P+S  DL LE   + K   KS+      A +W+IW+ RN+  FN K
Sbjct: 646  WDNIPSSREDL-LEKLNIQKDGQKSVLLACLAAGTWAIWLMRNDWVFNGK 694


>UniRef100_Q9SKJ4 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1750

 Score =  312 bits (800), Expect = 4e-83
 Identities = 251/923 (27%), Positives = 417/923 (44%), Gaps = 83/923 (8%)

Query: 414  FFSSGRISRGMNAAFITLIPKKENASSLNHYRPISLIRSSYKLIAKVLATRLQKVMPKLL 473
            FF +  +   +N   I +IPK  N ++L+ YRPI+L    YK+I+K L  RL+  +  ++
Sbjct: 856  FFETSFMKPSINHTNICMIPKITNPTTLSDYRPIALCNVLYKVISKCLVNRLKSHLNSIV 915

Query: 474  SQNQFAFTKERQIADCILLANEVADFLSKK---SEGGLMLKVDLAKAYDQVDWEFLINML 530
            S +Q AF   R I D +++A+EV   L  +   S+  + +K D++KAYD+V+W+FL   +
Sbjct: 916  SDSQAAFIPGRIINDNVMIAHEVMHSLKVRKRVSKTYMAVKTDVSKAYDRVEWDFLETTM 975

Query: 531  HEMNFGDKWISWMKSCISSASLAILVNGSPTDFFSIEKGLRQGDPLSPLLFNLCLNGLSC 590
                F +KWI W+ + + S   ++L+NGSP  + +  +G+RQGDPLSP LF LC + LS 
Sbjct: 976  RLFGFCNKWIGWIMAAVKSVHYSVLINGSPHGYITPTRGIRQGDPLSPYLFILCGDILSH 1035

Query: 591  LLNQFLGEENYCGVRISRNL-TINHLLFADDTLLFCENNELQLETLCNVLITFLFASGLK 649
            L+N      +  GVRI      I HL FADD+L FC+ N    + L +V   + + SG K
Sbjct: 1036 LINGRASSGDLRGVRIGNGAPAITHLQFADDSLFFCQANVRNCQALKDVFDVYEYYSGQK 1095

Query: 650  VNNQKSEL-IGCNVQTVEVERLAHSFGWSVGTLPISYLGAPLGGNPRRIVFWNPMLEKLK 708
            +N QKS +  G  V      RL              YLG P     ++   +  +++++K
Sbjct: 1096 INVQKSMITFGSRVYGSTQSRLKQILEIPNQGGGGKYLGLPEQFGRKKKEMFEYIIDRVK 1155

Query: 709  CKTRSYNSKFMSLSGRLVITKSVLCSIPLFLMVVFKAPKGVILEVEKLFHAFIWGQEQGR 768
             +T +++++F+S +G+ ++ KSV  ++P++ M  FK PKG++ E+E L   F W +   +
Sbjct: 1156 KRTSTWSARFLSPAGKEIMLKSVALAMPVYAMSCFKLPKGIVSEIESLLMNFWWEKASNQ 1215

Query: 769  KKINWIGWDQICLNRKAGGLGLGFIEWRNRGLLLKWAWRFGREINSLWRFFVIERYNLDP 828
            + I W+ W ++  ++K GGLG   +   N  LL K AWR  +  NSL+   +  RY  D 
Sbjct: 1216 RGIPWVAWKRLQYSKKEGGLGFRDLAKFNDALLAKQAWRLIQYPNSLFARVMKARYFKD- 1274

Query: 829  DSLIWHMASTTPAMGSRAIQDIWRVLNEDHSLSAGFKENLLISIGDGSRVKFWRDPWVSN 888
                    S   A   +     W  L +  +L    K+     IGDG  ++   D    N
Sbjct: 1275 -------VSILDAKVRKQQSYGWASLLDGIAL---LKKGTRHLIGDGQNIRIGLD----N 1320

Query: 889  VALCHLFPRLYAMSENKEARIAEVGTYSRGKWGWSLTFRGQFFAWEEELYQQFLASINH- 947
            +   H    L      KE  I  +  + R         +G ++ W++    QF+   +H 
Sbjct: 1321 IVDSHPPRPLNTEETYKEMTINNL--FER---------KGSYYFWDDSKISQFVDQSDHG 1369

Query: 948  -----IIPAAVGGDQLIWCANQTGLFSVKELCYWLEDH----------------LFTHQM 986
                  +  +   D++IW  N TG ++V+   YWL  H                    ++
Sbjct: 1370 FIHRIYLAKSKKPDKIIWNYNTTGEYTVRS-GYWLLTHDPSTNIPAINPPHGSIDLKTRI 1428

Query: 987  WQVPKSIAKLLPPKVALFFWQAQNDKIATRANLLARGIDLNGSTQCLFCNAFDESCNHIF 1046
            W +P      + PK+  F W+A +  +AT   L  RG+ ++ S  C  C+  +ES NH  
Sbjct: 1429 WNLP------IMPKLKHFLWRALSQALATTERLTTRGMRIDPS--CPRCHRENESINHAL 1480

Query: 1047 LHCHSIWSLWCV----IVNRERFLWVMPASLADLILEWDFLPKISDKSLWSLIPYALSWS 1102
              C      W +    ++  +        ++++++   +F+   +      L+P  L W 
Sbjct: 1481 FTCPFATMAWRLSDSSLIRNQLMSNDFEENISNIL---NFVQDTTMSDFHKLLPVWLIWR 1537

Query: 1103 IWIERNNICFNHKALNISEIWDFHLLRIGWWTHELLRQNSYSIDQLSRNFESIRFASKPS 1162
            IW  RNN+ FN    + S+     +L     TH+ L          +++ +     ++  
Sbjct: 1538 IWKARNNVVFNKFRESPSKT----VLSAKAETHDWL--------NATQSHKKTPSPTRQI 1585

Query: 1163 LLRAASWVTPDAGLIKINVDGAAKGSPGRCGIGGILRNNANVILGFFS-KSVGEGYAFEA 1221
                  W  P A  +K N D            G I+RN+    + + S K        EA
Sbjct: 1586 AENKIEWRNPPATYVKCNFDAGFDVQKLEATGGWIIRNHYGTPISWGSMKLAHTSNPLEA 1645

Query: 1222 EVLAIHEALLFCVQRQLRNIIIESDSSLAVGWVNNRCNRPWKLLNKLNQIDRWLVETNCL 1281
            E  A+  AL     R    + +E D    +  +N   +    L N L  I  W  +   +
Sbjct: 1646 ETKALLAALQQTWIRGYTQVFMEGDCQTLINLING-ISFHSSLANHLEDISFWANKFASI 1704

Query: 1282 KVNHIYREANGEADKLAKRGAEY 1304
            +   I ++ N  A  LAK G  Y
Sbjct: 1705 QFGFIRKKGNKLAHVLAKYGCTY 1727


>UniRef100_Q9SIQ5 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1524

 Score =  312 bits (799), Expect = 5e-83
 Identities = 256/930 (27%), Positives = 415/930 (44%), Gaps = 97/930 (10%)

Query: 414  FFSSGRISRGMNAAFITLIPKKENASSLNHYRPISLIRSSYKLIAKVLATRLQKVMPKLL 473
            FF +  +   +N   I +IPK  N ++L+ YRPI+L    YK+I+K L  RL+  +  ++
Sbjct: 630  FFETSFMKPSINHTNICMIPKITNPTTLSDYRPIALCNVLYKVISKCLVNRLKSHLNSIV 689

Query: 474  SQNQFAFTKERQIADCILLANEVADFLSKK---SEGGLMLKVDLAKAYDQVDWEFLINML 530
            S +Q AF   R I D +++A+EV   L  +   S+  + +K D++KAYD+V+W+FL   +
Sbjct: 690  SDSQAAFIPGRIINDNVMIAHEVMHSLKVRKRVSKTYMAVKTDVSKAYDRVEWDFLETTM 749

Query: 531  HEMNFGDKWISWMKSCISSASLAILVNGSPTDFFSIEKGLRQGDPLSPLLFNLCLNGLSC 590
                F +KWI W+ + + S   ++L+NGSP  + +  +G+RQGDPLSP LF LC + LS 
Sbjct: 750  RLFGFCNKWIGWIMAAVKSVHYSVLINGSPHGYITPTRGIRQGDPLSPYLFILCGDILSH 809

Query: 591  LLNQFLGEENYCGVRISRNL-TINHLLFADDTLLFCENNELQLETLCNVLITFLFASGLK 649
            L+N      +  GVRI      I HL FADD+L FC+ N    + L +V   + + SG K
Sbjct: 810  LINGRASSGDLRGVRIGNGAPAITHLQFADDSLFFCQANVRNCQALKDVFDVYEYYSGQK 869

Query: 650  VNNQKSEL-IGCNVQTVEVERLAHSFGWSVGTLPISYLGAPLGGNPRRIVFWNPMLEKLK 708
            +N QKS +  G  V      +L              YLG P     ++   +  +++++K
Sbjct: 870  INVQKSMITFGSRVYGSTQSKLKQILEIPNQGGGGKYLGLPEQFGRKKKEMFEYIIDRVK 929

Query: 709  CKTRSYNSKFMSLSGRLVITKSVLCSIPLFLMVVFKAPKGVILEVEKLFHAFIWGQEQGR 768
             +T +++++F+S +G+ ++ KSV  ++P++ M  FK PKG++ E+E L   F W +   +
Sbjct: 930  KRTSTWSARFLSPAGKEIMLKSVALAMPVYAMSCFKLPKGIVSEIESLLMNFWWEKASNQ 989

Query: 769  KKINWIGWDQICLNRKAGGLGLGFIEWRNRGLLLKWAWRFGREINSLWRFFVIERYNLDP 828
            + I W+ W ++  ++K GGLG   +   N  LL K AWR  +  NSL+   +  RY  D 
Sbjct: 990  RGIPWVAWKRLQYSKKEGGLGFRDLAKFNDALLAKQAWRLIQYPNSLFARVMKARYFKD- 1048

Query: 829  DSLIWHMASTTPAMGSRAIQDIWRVLNEDHSLSAGFKENLLISIGDGSRVKFWRDPWVSN 888
                    S   A   +     W  L +  +L    K+     IGDG  ++   D    N
Sbjct: 1049 -------VSILDAKVRKQQSYGWASLLDGIAL---LKKGTRHLIGDGQNIRIGLD----N 1094

Query: 889  VALCHLFPRLYAMSENKEARIAEVGTYSRGKWGWSLTFRGQFFAWEEELYQQFLASINH- 947
            +   H    L      KE  I  +  + R         +G ++ W++    QF+   +H 
Sbjct: 1095 IVDSHPPRPLNTEETYKEMTINNL--FER---------KGSYYFWDDSKISQFVDQSDHG 1143

Query: 948  -----IIPAAVGGDQLIWCANQTGLFSVKELCYWLEDH----------------LFTHQM 986
                  +  +   D++IW  N TG ++V+   YWL  H                    ++
Sbjct: 1144 FIHRIYLAKSKKPDKIIWNYNTTGEYTVRS-GYWLLTHDPSTNIPAINPPHGSIDLKTRI 1202

Query: 987  WQVPKSIAKLLPPKVALFFWQAQNDKIATRANLLARGIDLNGSTQCLFCNAFDESCNHIF 1046
            W +P      + PK+  F W+A +  +AT   L  RG+ ++    C  C+  +ES NH  
Sbjct: 1203 WNLP------IMPKLKHFLWRALSQALATTERLTTRGMRID--PICPRCHRENESINHAL 1254

Query: 1047 LHCHSIWSLWCVIVNRERFLWVMPASL-ADLILEWDFLPKISD----------KSLWSLI 1095
              C      W          W+  +SL  + ++  DF   IS+               L+
Sbjct: 1255 FTCPFATMAW----------WLSDSSLIRNQLMSNDFEENISNILNFVQDTTMSDFHKLL 1304

Query: 1096 PYALSWSIWIERNNICFNHKALNISEIWDFHLLRIGWWTHELLRQNSYSIDQLSRNFESI 1155
            P  L W IW  RNN+ FN    + S+     +L     TH+ L          +++ +  
Sbjct: 1305 PVWLIWRIWKARNNVVFNKFRESPSKT----VLSAKAETHDWL--------NATQSHKKT 1352

Query: 1156 RFASKPSLLRAASWVTPDAGLIKINVDGAAKGSPGRCGIGGILRNNANVILGFFS-KSVG 1214
               ++        W  P A  +K N D            G I+RN+    + + S K   
Sbjct: 1353 PSPTRQIAENKIEWRNPPATYVKCNFDAGFDVQKLEATGGWIIRNHYGTPISWGSMKLAH 1412

Query: 1215 EGYAFEAEVLAIHEALLFCVQRQLRNIIIESDSSLAVGWVNNRCNRPWKLLNKLNQIDRW 1274
                 EAE  A+  AL     R    + +E D    +  +N   +    L N L  I  W
Sbjct: 1413 TSNPLEAETKALLAALQQTWIRGYTQVFMEGDCQTLINLING-ISFHSSLANHLEDISFW 1471

Query: 1275 LVETNCLKVNHIYREANGEADKLAKRGAEY 1304
              +   ++   I R+ N  A  LAK G  Y
Sbjct: 1472 ANKFASIQFGFIRRKGNKLAHVLAKYGCTY 1501


>UniRef100_Q7XJS2 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1344

 Score =  303 bits (777), Expect = 2e-80
 Identities = 240/865 (27%), Positives = 396/865 (45%), Gaps = 86/865 (9%)

Query: 414  FFSSGRISRGMNAAFITLIPKKENASSLNHYRPISLIRSSYKLIAKVLATRLQKVMPKLL 473
            FF +G + +  N   I LIPK  +   ++  RPISL    YK+I+K+L  RL+K +P ++
Sbjct: 452  FFETGVLPQDWNHTHICLIPKITSPQRMSDLRPISLCSVLYKIISKILTQRLKKHLPAIV 511

Query: 474  SQNQFAFTKERQIADCILLANEVADFL---SKKSEGGLMLKVDLAKAYDQVDWEFLINML 530
            S  Q AF  +R I+D IL+A+E+   L    + S+  +  K D++KAYD+V+W FL  M+
Sbjct: 512  STTQSAFVPQRLISDNILVAHEMIHSLRTNDRISKEHMAFKTDMSKAYDRVEWPFLETMM 571

Query: 531  HEMNFGDKWISWMKSCISSASLAILVNGSPTDFFSIEKGLRQGDPLSPLLFNLCLNGLSC 590
              + F +KWISW+ +C++S S ++L+NG P       +G+RQGDPLSP LF LC   L  
Sbjct: 572  TALGFNNKWISWIMNCVTSVSYSVLINGQPYGHIIPTRGIRQGDPLSPALFVLCTEALIH 631

Query: 591  LLNQFLGEENYCGVRI-SRNLTINHLLFADDTLLFCENNELQLETLCNVLITFLFASGLK 649
            +LN+        G++   + +++NHLLFADDTLL C+  + + E L   L  +   SG  
Sbjct: 632  ILNKAEQAGKITGIQFQDKKVSVNHLLFADDTLLMCKATKQECEELMQCLSQYGQLSGQM 691

Query: 650  VNNQKSEL-IGCNVQTVEVERLAHSFGWSVGTLPISYLGAP--LGGNPRRIVFWNPMLEK 706
            +N  KS +  G NV     + +    G S+      YLG P  L G+ R +  +  + EK
Sbjct: 692  INLNKSAITFGKNVDIQIKDWIKSRSGISLEGGTGKYLGLPECLSGSKRDL--FGFIKEK 749

Query: 707  LKCKTRSYNSKFMSLSGRLVITKSVLCSIPLFLMVVFKAPKGVILEVEKLFHAFIWGQEQ 766
            L+ +   + +K +S  G+ V+ KS+  ++P+++M  FK PK +  ++  +   F W   Q
Sbjct: 750  LQSRLTGWYAKTLSQGGKEVLLKSIALALPVYVMSCFKLPKNLCQKLTTVMMDFWWNSMQ 809

Query: 767  GRKKINWIGWDQICLNRKAGGLGLGFIEWRNRGLLLKWAWRFGREINSLWRFFVIERYNL 826
             ++KI+W+ W ++ L +  GG G   ++  N+ LL K AWR  +E  SL+      RY  
Sbjct: 810  QKRKIHWLSWQRLTLPKDQGGFGFKDLQCFNQALLAKQAWRVLQEKGSLFSRVFQSRYFS 869

Query: 827  DPDSLIWHMASTTPAMGSRAIQDIWRVLNEDHSLSAGFKENLLISIGDGSRVKFWRDPWV 886
            + D L       +   GSR     WR +     L     + L   IG+G +   W D W+
Sbjct: 870  NSDFL-------SATRGSRP-SYAWRSILFGREL---LMQGLRTVIGNGQKTFVWTDKWL 918

Query: 887  SNVALCHLFPRLYAMSENKEARIAE-VGTYSRGKWGWSLTFRGQFFAWEEELYQQFLASI 945
             + +  +  P       N + ++++ +   SR    W+L      F W++      +  I
Sbjct: 919  HDGS--NRRPLNRRRFINVDLKVSQLIDPTSR---NWNLNMLRDLFPWKD------VEII 967

Query: 946  NHIIPAAVGGDQLIWCANQTGLFSVKELCYWLEDHLFTHQMWQ---VPKSIAKLL----- 997
                P     D   W  +  GL+SVK    +L   +  H+++Q   V  S+  L      
Sbjct: 968  LKQRPLFFKEDSFCWLHSHNGLYSVKTGYEFLSKQVH-HRLYQEAKVKPSVNSLFDKIWN 1026

Query: 998  ---PPKVALFFWQAQNDKIATRANLLARGIDLNGSTQCLFCNAFDESCNHIFLHC---HS 1051
                PK+ +F W+A +  I     L  RGI       CL C+  +E+ NHI   C     
Sbjct: 1027 LHTAPKIRIFLWKALHGAIPVEDRLRTRGI--RSDDGCLMCDTENETINHILFECPLARQ 1084

Query: 1052 IWSLWCVIVNRERF---LWVMPASLADLILEWDFLPKISDKSLWSLIPYALSWSIWIERN 1108
            +W++  +      F   ++   + L DL  + D    +   S W L      W +W  RN
Sbjct: 1085 VWAITHLSSAGSEFSNSVYTNMSRLIDLTQQNDLPHHLRFVSPWIL------WFLWKNRN 1138

Query: 1109 NICFNHKALNISEIWD-----FHLLRIGWWTHELLRQNSYSIDQLSRNFESIRFASKPSL 1163
             + F  K    + + D     +H     W++ +   QN                      
Sbjct: 1139 ALLFEGKGSITTTLVDKAYEAYH----EWFSAQTHMQND------------------EKH 1176

Query: 1164 LRAASWVTPDAGLIKINVDGAAKGSPGRCGIGGILRNNANVILGFFSKSVGEGYA-FEAE 1222
            L+   W  P  G +K N+  A        G   ++R++   +L    +S  E ++ + A+
Sbjct: 1177 LKITKWCPPLPGELKCNIGFAWSKQHHFSGASWVVRDSQGKVLLHSRRSFNEVHSPYSAK 1236

Query: 1223 VLAIHEALLFCVQRQLRNIIIESDS 1247
            + +   AL          +I  S +
Sbjct: 1237 IRSWEWALESMTHHHFDRVIFASST 1261


>UniRef100_Q9FYJ4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score =  301 bits (770), Expect = 1e-79
 Identities = 205/672 (30%), Positives = 332/672 (48%), Gaps = 49/672 (7%)

Query: 404  GAWFEWMFEDFFSSGRISRGMNAAFITLIPKKENASSLNHYRPISLIRSSYKLIAKVLAT 463
            G  F    + FF  G + +G+N+  + LIPKK  A  +  YRPIS     YK+I+K++A 
Sbjct: 136  GQEFTLPVQSFFQKGFLPKGINSIILALIPKKLAAKEMRDYRPISCCNVLYKVISKIIAN 195

Query: 464  RLQKVMPKLLSQNQFAFTKERQIADCILLANE-VADFLSKKSEGGLMLKVDLAKAYDQVD 522
            RL+ ++P+ +++NQ AF K+R + + +LLA E V D+          +K+D++KA+D V 
Sbjct: 196  RLKLLLPRFIAENQSAFVKDRLLIENLLLATELVKDYHKDSISARCAIKIDISKAFDSVQ 255

Query: 523  WEFLINMLHEMNFGDKWISWMKSCISSASLAILVNGSPTDFFSIEKGLRQGDPLSPLLFN 582
            W FL N L  MNF   +I W+  CI++AS ++ VNG    +F  ++GLRQG  LSP LF 
Sbjct: 256  WSFLTNTLVAMNFSPTFIHWINLCITTASFSVQVNGDLVGYFQSKRGLRQGCSLSPYLFV 315

Query: 583  LCLNGLSCLLNQFLGEENYCGVRISRNLTINHLLFADDTLLFCENNELQLETLCNVLITF 642
            +C++ LS +L++  G   +      + L + HL FADD ++  +     +E +  V   F
Sbjct: 316  ICMDVLSKMLDKAAGVRKFGFHPKCQRLGLTHLSFADDLMVLSDGKTRSIEGILEVFDEF 375

Query: 643  LFASGLKVNNQKSELIGCNVQTVEVERLAHSFGWSVGTLPISYLGAPLGGNPRRIVFWNP 702
               SGL+++ +KS L    V  +  + +A  F + VG LP+ YLG PL         ++P
Sbjct: 376  CKRSGLRISLEKSTLYMAGVSPIIKQEIAAKFLFDVGQLPVRYLGLPLVTKRLTSADYSP 435

Query: 703  MLEKLKCKTRSYNSKFMSLSGRLVITKSVLCSIPLFLMVVFKAPKGVILEVEKLFHAFIW 762
            +LE++K +  ++  +F S +GR  + KSVL SI  F +  F+ P+  I E++KL  +F+W
Sbjct: 436  LLEQIKKRIATWTFRFFSFAGRFNLIKSVLWSICNFWLAAFRLPRQCIREIDKLCSSFLW 495

Query: 763  -GQEQGRKKINWIGWDQICLNRKAGGLGLGFIEWRNRGLLLKWAWRFGREINSLWRFFVI 821
             G E    K   I WD +C  +  GGLGL  ++  N    LK  WR     NSLW  +V 
Sbjct: 496  SGSEMSSHKAK-ISWDIVCKPKAEGGLGLRNLKEANDVSCLKLVWRIISNSNSLWTKWVA 554

Query: 822  ERYNLDPDSLIWHMASTTPAMGSRAIQDIWRVLNEDHSLSAGFKENLLISIGDGSRVKFW 881
            E Y +   S IW +  +T +MGS     IWR + +   ++  F     + +G+G    FW
Sbjct: 555  E-YLIRKKS-IWSLKQST-SMGSW----IWRKILKIRDVAKSFSR---VEVGNGESASFW 604

Query: 882  RDPWVSNVALCHLF--PRLYAMSENKEARIAEVGT-YSRGKWGWSLTFRGQFFAWEEELY 938
             D W ++  L           +   +EA +A+  T  SR +   SL    +    E   Y
Sbjct: 605  YDHWSAHGRLIDTVGDKGTIDLGIPREASVADAWTRRSRRRHRTSLLNEIE----EMMAY 660

Query: 939  QQFLASINHIIPAAVGGDQLIWCANQTGLFSVKELCYWLEDHLFTHQMWQVPKSIAKLL- 997
            Q+    I+H    +   D ++W   +  +F         + H  T   W + K+ +  + 
Sbjct: 661  QR----IHH----SDAEDTVLW-RGKNDVF---------KPHFSTRDTWHLIKATSSTVS 702

Query: 998  ----------PPKVALFFWQAQNDKIATRANLLARGIDLNGSTQCLFCNAFDESCNHIFL 1047
                       PK AL  W A ++++ T   +L      + S  C+ C    ++  H+F 
Sbjct: 703  WHKGVWFRHATPKYALCTWLAIHNRLPTGDRMLKWNSSGSVSGNCVLCTNNSKTLEHLFF 762

Query: 1048 HCHSIWSLWCVI 1059
             C    ++W  +
Sbjct: 763  SCSYASTVWAAL 774


>UniRef100_Q9LVQ1 Non-LTR retroelement reverse transcriptase-like [Arabidopsis
            thaliana]
          Length = 1072

 Score =  298 bits (763), Expect = 7e-79
 Identities = 228/723 (31%), Positives = 349/723 (47%), Gaps = 51/723 (7%)

Query: 413  DFFSSGRISRGMNAAFITLIPKKENASSLNHYRPISLIRSSYKLIAKVLATRLQKVMPKL 472
            +FF SG++ +  NA  + LIPK  NA +++ +RPIS + + YK+I+K+L +RLQ ++  +
Sbjct: 352  EFFDSGQLLKQWNATTLVLIPKTSNACTISEFRPISCLNTLYKVISKLLTSRLQGLLSAV 411

Query: 473  LSQNQFAFTKERQIADCILLANEVADFLSKKSEGGL-MLKVDLAKAYDQVDWEFLINMLH 531
            +  +Q AF   R +A+ +LLA E+    ++ +     MLKVDL KA+D V WEF+   L 
Sbjct: 412  IGHSQSAFLPGRSLAENVLLATEMVHGYNRLNISPRGMLKVDLKKAFDSVKWEFVTAALR 471

Query: 532  EMNFGDKWISWMKSCISSASLAILVNGSPTDFFSIEKGLRQGDPLSPLLFNLCLNGLSCL 591
             +   +++I+W+  CI++ S  I VNG+   FF   KGLRQGDPLSP LF L +   S L
Sbjct: 472  ALAIPERYINWIHQCITTPSFTISVNGATGGFFRSTKGLRQGDPLSPYLFVLAMEVFSKL 531

Query: 592  LNQFLGEENYCGVRISRNLTINHLLFADDTLLFCENNELQLETLCNVLITFLFASGLKVN 651
            L              + +L+I+HL+FADD ++F +     +  +C  L  F   SGLKVN
Sbjct: 532  LYSRYDSGYIHYHPKAGDLSISHLMFADDVMIFFDGGSSSMHGICETLDDFADWSGLKVN 591

Query: 652  NQKSELIGCNVQTVEVERLAHSFGWSVGTLPISYLGAPLGGNPRRIVFWNPMLEKLKCKT 711
              KS+L    +   E    A ++G+  GT PI YLG PL     RI  + P+LEKL  + 
Sbjct: 592  KDKSQLFQAGLDLSERITSA-AYGFPAGTFPIRYLGLPLMCRKLRIADYGPLLEKLSARL 650

Query: 712  RSYNSKFMSLSGRLVITKSVLCSIPLFLMVVFKAPKGVILEVEKLFHAFIWGQEQGRKKI 771
            RS+ SK +S +GR  +  SV+  +  F M  F  PKG I ++E L   F+W      +K 
Sbjct: 651  RSWVSKALSFAGRTQLISSVIFGLINFWMSTFLLPKGCIKKIESLCSKFLWAGSIDGRKS 710

Query: 772  NWIGWDQICLNRKAGGLGL-GFIEWRNRGLLLKWAWRFGREINSLWRFFVIERYNLDPDS 830
            + + W   CL +  GGLG   F EW N+ LLL+  W       SLW  +  +R++    +
Sbjct: 711  SKVSWVDCCLPKSEGGLGFRSFGEW-NKTLLLRLIWVLFDRDTSLWAQW--QRHHRLGHA 767

Query: 831  LIWHMASTTPAMGSRAIQD---IWRVLNEDHSLSAGFKENLLISIGDGSRVKFWRDPWVS 887
              W +          A+Q     W++L     L+  F   +   +G+G  V FW D W S
Sbjct: 768  SFWQV---------NALQTDPWTWKMLLNLRPLAEKF---IKAKVGNGGTVSFWFDCWTS 815

Query: 888  NVALCHLFPRLYAMSE--NKEARI---AEVGTYSRGKWGWSLTFRGQFFAWEEELYQQFL 942
                  L P +  + +  ++  RI   A+V     G  GW L       A   +     L
Sbjct: 816  ------LGPLIKYLGDVGSRPLRIPFSAKVADAIDGS-GWRLPLSRSLTA---DSILSHL 865

Query: 943  ASINHIIPAAVGGDQLIWCANQTGLFSVKELCYWLEDHLFTHQMWQVPKSI-AKLLPPKV 1001
            AS+    P  V  D   WC +            W E       + +  KS+  K   PK 
Sbjct: 866  ASLPPPSPLMV-SDSYSWCVDDVDCQGFSAAKTW-EVLRPRRPVKRWAKSVWFKGAVPKH 923

Query: 1002 ALFFWQAQNDKIATRANLLARGIDLNGSTQCLFCNAFDESCNHIFLHCHSIWSLWCVI-- 1059
            A  FW AQ +++ TR  L++ G  L  S +C  C+   E+ +H+ L C     +W ++  
Sbjct: 924  AFNFWTAQLNRLPTRQRLVSWG--LVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFL 981

Query: 1060 --VNRERFLWVMPASLADLILEWDFLPKISDKSLWSLIPYALSWSIWIERNNICFNHKAL 1117
                R+R L      L+         P +  K +  L+ Y    ++W +RN +   H +L
Sbjct: 982  RLCPRQRLLCTWAELLSWTRQSTAAAPSLLRKVVAQLVVY----NLWRQRNLVL--HSSL 1035

Query: 1118 NIS 1120
             +S
Sbjct: 1036 RVS 1038


>UniRef100_Q9M1F2 Hypothetical protein F9K21.130 [Arabidopsis thaliana]
          Length = 851

 Score =  296 bits (758), Expect = 3e-78
 Identities = 227/802 (28%), Positives = 373/802 (46%), Gaps = 81/802 (10%)

Query: 414  FFSSGRISRGMNAAFITLIPKKENASSLNHYRPISLIRSSYKLIAKVLATRLQKVMPKLL 473
            FF S  +   +N   I +IPK +N  +L+ YRPI+L    YK+I+K +  RL+  +  ++
Sbjct: 95   FFESSHMKTSVNHTNICMIPKIQNPQTLSDYRPIALCNVLYKVISKCMVNRLKAHLNSIV 154

Query: 474  SQNQFAFTKERQIADCILLANEVADFLSKK---SEGGLMLKVDLAKAYDQVDWEFLINML 530
            S +Q AF   R I D +++A+E+   L  +   S+  + +K D++KAYD+V+W+FL   +
Sbjct: 155  SDSQAAFIPGRIINDNVMIAHEIMHSLKVRKRVSKTYMAVKTDVSKAYDRVEWDFLETTM 214

Query: 531  HEMNFGDKWISWMKSCISSASLAILVNGSPTDFFSIEKGLRQGDPLSPLLFNLCLNGLSC 590
                F DKWI W+ + + S   ++L+NGSP  + S  +G+RQGDPLSP LF LC + LS 
Sbjct: 215  RLFGFCDKWIGWIMAAVKSVHYSVLINGSPHGYISPTRGIRQGDPLSPYLFILCGDILSH 274

Query: 591  LLNQFLGEENYCGVRISRNL-TINHLLFADDTLLFCENNELQLETLCNVLITFLFASGLK 649
            L+       +  GVRI      I HL FADD+L FC+ N    + L +V   + + SG K
Sbjct: 275  LIKVKASSGDIRGVRIGNGAPAITHLQFADDSLFFCQANVRNCQALKDVFDVYEYYSGQK 334

Query: 650  VNNQKSEL-IGCNVQTVEVERLAHSFGWSVGTLPISYLGAPLGGNPRRIVFWNPMLEKLK 708
            +N QKS +  G  V      RL              YLG P     ++   +N +++++K
Sbjct: 335  INVQKSLITFGSRVYGSTQTRLKTLLNIPNQGGGGKYLGLPEQFGRKKKEMFNYIIDRVK 394

Query: 709  CKTRSYNSKFMSLSGRLVITKSVLCSIPLFLMVVFKAPKGVILEVEKLFHAFIWGQEQGR 768
             +T S+++KF+S +G+ ++ KSV  ++P++ M  FK P+G++ E+E L   F W +   +
Sbjct: 395  ERTASWSAKFLSPAGKEILLKSVALAMPVYAMSCFKLPQGIVSEIESLLMNFWWEKASNK 454

Query: 769  KKINWIGWDQICLNRKAGGLGLGFIEWRNRGLLLKWAWRFGREINSLWRFFVIERYNLDP 828
            + I W+ W ++  ++K GGLG   +   N  LL K AWR  +  NSL+   +  RY  D 
Sbjct: 455  RGIPWVAWKRLQYSKKEGGLGFRDLAKFNDALLAKQAWRIIQYPNSLFARVMKARYFKD- 513

Query: 829  DSLIWHMASTTPAMGSRAIQDIWRVLNEDHSLSAGFKENLLISIGDGSRVKFWRDPWVSN 888
            +S+I     +  + G       W  L    +L    ++     IGDG  ++      + N
Sbjct: 514  NSIIDAKTRSQQSYG-------WSSLLSGIAL---LRKGTRYVIGDGKTIRL----GIDN 559

Query: 889  VALCHLFPRLYAMSENKEARIAEVGTYSRGKWGWSLTFRGQFFAWEEELYQQFLASINH- 947
            V   H  P    +++ +   ++    +           RG    W+    Q F+   +H 
Sbjct: 560  VVDSH--PPRPLLTDEQHNGLSLDNLFQH---------RGHSRCWDNAKLQTFVDQSDHD 608

Query: 948  -----IIPAAVGGDQLIWCANQTGLFSVKELCYWLEDHLFTH----------------QM 986
                  +      D+LIW  N TG ++V+   YWL  H  ++                ++
Sbjct: 609  YIKRIYLSTRSKTDRLIWSYNSTGDYTVRS-GYWLSTHDPSNTIPTMAKPHGSVDLKTKI 667

Query: 987  WQVPKSIAKLLPPKVALFFWQAQNDKIATRANLLARGIDLNGSTQCLFCNAFDESCNHIF 1046
            W +P      + PK+  F W+  +  + T   L  RG+ ++    C  C   +ES NH  
Sbjct: 668  WNLP------IMPKLKHFLWRILSKALPTTDRLTTRGMRIDPG--CPRCRRENESINHAL 719

Query: 1047 LHC---HSIWSLWCVIVNRERFLW-VMPASLADLILEWDFLPKISDKSLWSLIPYALSWS 1102
              C      W L    + R   L   +  ++++++L    L   +      LIP+ L W 
Sbjct: 720  FTCPFATMAWRLSDTPLYRSSILSNNIEDNISNILL---LLQNTTITDSQKLIPFWLLWR 776

Query: 1103 IWIERNNICFNHKALNISEIWDFHLLRIGWWTHELLRQNSYSIDQLSRNFESIRFASKPS 1162
            IW  RNN+ FN    N+ E     ++R    T+E L        +        R   + +
Sbjct: 777  IWKARNNVVFN----NLRESPSITVVRAKAETNEWLNATQTQGPR--------RLPKRTT 824

Query: 1163 LLRAASWVTPDAGLIKINVDGA 1184
                 +WV P    IK N D +
Sbjct: 825  AAGNTTWVKPQMPYIKCNFDAS 846


>UniRef100_Q9SJ38 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1229

 Score =  293 bits (750), Expect = 2e-77
 Identities = 203/663 (30%), Positives = 317/663 (47%), Gaps = 56/663 (8%)

Query: 414  FFSSGRISRGMNAAFITLIPKKENASSLNHYRPISLIRSSYKLIAKVLATRLQKVMPKLL 473
            FF+S    R MN   I LIPK      +  YRPI+L    YK++AK++  R+Q ++PKL+
Sbjct: 369  FFTSKNFPRRMNETHIRLIPKDLGPRKVADYRPIALCNIFYKIVAKIMTKRMQLILPKLI 428

Query: 474  SQNQFAFTKERQIADCILLANEVADFL---SKKSEGGLMLKVDLAKAYDQVDWEFLINML 530
            S+NQ AF   R I+D +L+ +EV  FL   S K    + +K D++KAYD+V+W+FL  +L
Sbjct: 429  SENQSAFVPGRVISDNVLITHEVLHFLRTSSAKKHCSMAVKTDMSKAYDRVEWDFLKKVL 488

Query: 531  HEMNFGDKWISWMKSCISSASLAILVNGSPTDFFSIEKGLRQGDPLSPLLFNLCLNGLSC 590
                F   WI W+  C++S S + L+NG+P       +GLRQGDPLSP LF LC   LS 
Sbjct: 489  QRFGFHSIWIDWVLECVTSVSYSFLINGTPQGKVVPTRGLRQGDPLSPCLFILCTEVLSG 548

Query: 591  LLNQFLGEENYCGVRISRN-LTINHLLFADDTLLFCENNELQLETLCNVLITFLFASGLK 649
            L  +        GVR+S N   +NHLLFADDT+ F +++      L  +L  +  ASG  
Sbjct: 549  LCTRAQRLRQLPGVRVSINGPRVNHLLFADDTMFFSKSDPESCNKLSEILSRYGKASGQS 608

Query: 650  VNNQKSELI-------GCNVQTVEVERLAHSFGWSVGTLPISYLGAPLGGNPRRIVFWNP 702
            +N  KS +            Q   + ++    G         YLG P     R+   +  
Sbjct: 609  INFHKSSVTFSSKTPRSVKGQVKRILKIRKEGGTG------KYLGLPEHFGRRKRDIFGA 662

Query: 703  MLEKLKCKTRSYNSKFMSLSGRLVITKSVLCSIPLFLMVVFKAPKGVILEVEKLFHAFIW 762
            +++K++ K+ S+ S+F+S +G+ V+ K+VL S+PL+ M  FK P  +  +++ L   F W
Sbjct: 663  IIDKIRQKSHSWASRFLSQAGKQVMLKAVLASMPLYSMSCFKLPSALCRKIQSLLTRFWW 722

Query: 763  GQEQGRKKINWIGWDQICLNRKAGGLGLGFIEWRNRGLLLKWAWRFGREINSLWRFFVIE 822
              +   +K +W+ W ++   + AGGLG   IE  N  LL K  WR      SL    ++ 
Sbjct: 723  DTKPDVRKTSWVAWSKLTNPKNAGGLGFRDIERCNDSLLAKLGWRLLNSPESLLSRILLG 782

Query: 823  RYNLDPDSLIWHMASTTPAMGSRAIQDIWRVLNEDHSLSAGFKENLLISIGDGSRVKFWR 882
            +Y     S +     + P+ G       WR +     +    KE L   I +G +V  W 
Sbjct: 783  KY-CHSSSFMECKLPSQPSHG-------WRSIIAGREI---LKEGLGWLITNGEKVSIWN 831

Query: 883  DPWVSNVALCHLFPRLYAMSENKEARIAEVGTYSRGKWGWSLTFRGQFFAWEEELYQQFL 942
            DPW+S      L P   A+ E+++ R++ +   +  +W W+           E L +Q  
Sbjct: 832  DPWLS--ISKPLVPIGPALREHQDLRVSALINQNTLQWDWNKI--AVILPNYENLIKQLP 887

Query: 943  ASINHIIPAAVGGDQLIWCANQTGLF---------SVKELCYWLEDHLFTHQMWQVPKSI 993
            A      P++ G D+L W   ++G +         SV  +        +   +W++    
Sbjct: 888  A------PSSRGVDKLAWLPVKSGQYTSRSGYGIASVASIPIPQTQFNWQSNLWKLQTL- 940

Query: 994  AKLLPPKVALFFWQAQNDKIATRANLLARGIDLNGSTQCLFCNAFDESCNHIFLHCHSIW 1053
                 PK+    W+A  + +     L+ R I  + S  C  C A  ES  H+F HC    
Sbjct: 941  -----PKIKHLMWKAAMEALPVGIQLVRRHI--SPSAACHRCGA-PESTTHLFFHCEFAA 992

Query: 1054 SLW 1056
             +W
Sbjct: 993  QVW 995


>UniRef100_Q9ZUF0 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1352

 Score =  290 bits (743), Expect = 2e-76
 Identities = 212/729 (29%), Positives = 347/729 (47%), Gaps = 73/729 (10%)

Query: 412  EDFFSSGRISRGMNAAFITLIPKKENASSLNHYRPISLIRSSYKLIAKVLATRLQKVMPK 471
            + FF  G + +G+N   + LI KK   S +  YRPIS     YK+++K++A RL++++P 
Sbjct: 644  QSFFLKGFLPKGINTTILALISKKHEVSGMKDYRPISCCNVLYKIVSKLMANRLKEILPA 703

Query: 472  LLSQNQFAFTKERQIADCILLANE-VADFLSKKSEGGLMLKVDLAKAYDQVDWEFLINML 530
             ++ NQ AF K+R + + +LLA+E V D+  +       LK+D++KA+D V W FLIN+L
Sbjct: 704  SIAPNQSAFIKDRLMMENLLLASELVKDYHKESISSRSALKIDISKAFDFVQWPFLINVL 763

Query: 531  HEMNFGDKWISWMKSCISSASLAILVNGSPTDFFSIEKGLRQGDPLSPLLFNLCLNGLSC 590
              ++  + +I W++ CI +AS ++ VNG  + FF  E+GLRQG  LSP L+ +C+N LSC
Sbjct: 764  KAIHLPEMFIHWIELCIGTASFSVQVNGELSGFFRSERGLRQGCSLSPYLYVICMNVLSC 823

Query: 591  LLNQFLGEENYCGVRISRNLTINHLLFADDTLLFCENNELQLETLCNVLITFLFASGLKV 650
            +L++   E+        RN+ + HL FADD ++F +     ++    +   F   S LK+
Sbjct: 824  MLDKAAVEKKISYHPRCRNMNLTHLCFADDIMVFSDGTSKSIQGTLAIFEKFAAMSWLKI 883

Query: 651  NNQKSELIGCNVQTVEVERLAHSFGWSVGTLPISYLGAPLGGNPRRIVFWNPMLEKLKCK 710
            + +KS +    +       +   F + +GTLP+ YLG PL         + P++EK++ +
Sbjct: 884  SLEKSTIFMAGISPNAKTSILQQFPFELGTLPVKYLGLPLLTKRMTQSDYLPLVEKIRAR 943

Query: 711  TRSYNSKFMSLSGRLVITKSVLCSIPLFLMVVFKAPKGVILEVEKLFHAFIWGQEQGRKK 770
              S+ ++F+S +GRL + KSVL SI  F + VF+ PK  + E+EK+F AF+W       K
Sbjct: 944  ITSWTNRFLSFAGRLQLIKSVLSSITNFWLSVFRLPKACLQEIEKMFSAFLWSGPDLNTK 1003

Query: 771  INWIGWDQICLNRKAGGLGLGFIEWRNRGLLLKWAWRFGREINSLWRFFVIERYNLDPDS 830
               I W ++C  ++ GGLGL  ++  N   LLK  WR     +SLW  +V    +L    
Sbjct: 1004 KAKIAWSEVCKLKEEGGLGLKPLKEANEVSLLKLIWRILSARDSLWVKWV--NKHLIRKE 1061

Query: 831  LIWHMASTTPAMGSRAIQDIWRVLNEDHSLSAGFKENLLISIGDGSRVKFWRDPWVSNVA 890
              W +   T  +GS     +WR + +    +  F     + +  G+   FW D W     
Sbjct: 1062 TFWSVKENT-GLGSW----LWRKILKQRDKARLFHR---MEVRSGTFTSFWHDHWCPLGR 1113

Query: 891  L-CHLFPR-LYAMSENKEARIAEVGTYSRGKWGWSLTFRGQFFAWEEELYQQFLASINHI 948
            L  H+  R    +     A +AEV    R K      F  Q  + + EL +Q        
Sbjct: 1114 LHQHMGSRGTIDLGIPNNATVAEVMNTHRRK-RHRADFLNQIKS-QIELARQ-------- 1163

Query: 949  IPAAVGGDQLIWCANQTGLFSVKELCYWLEDHLFTHQMWQVPKSIA-----------KLL 997
               +  GD+ +W          K+     +    + + WQ  +SI+              
Sbjct: 1164 -DRSTDGDRSLW----------KQKEDTFKSSFSSSKTWQQIRSISLRCDWYRGVWFSAS 1212

Query: 998  PPKVALFFWQAQNDKIATRANLLARGIDLNGSTQCLFCNAFDESCNHIFLHC----HSIW 1053
             PK +   W A ++++ T   +     +      C+FC    E+ +H+F  C    H  +
Sbjct: 1213 TPKYSFVTWLAFHNRLTTSDKICK--WNSGARYDCVFCGEELETRDHLFFSCPYSSHVWF 1270

Query: 1054 SLWCVIVNRERFLWVMPASLADLILEWDFL-PKISDKSLWSLIPYALSW-------SIWI 1105
            SL   ++N               IL W+ + P + D S   L  + L +       S+W 
Sbjct: 1271 SLTKGLLNGRN------------ILNWNLITPHLLDSSRPYLHVFTLRYAFQASIHSLWR 1318

Query: 1106 ERNNICFNH 1114
            ERN  C  H
Sbjct: 1319 ERN--CRRH 1325


>UniRef100_Q8LJX1 Putative reverse transcriptase [Sorghum bicolor]
          Length = 1998

 Score =  288 bits (738), Expect = 6e-76
 Identities = 212/705 (30%), Positives = 345/705 (48%), Gaps = 57/705 (8%)

Query: 422  RGMNAAFITLIPKKENASSLNHYRPISLIRSSYKLIAKVLATRLQKVMPKLLSQNQFAFT 481
            R +N +FITLIPK  N  S+N YRPISL+ +S KLI K+LA RLQ  +  L+ +NQ+ F 
Sbjct: 1296 RSINTSFITLIPKSHNPVSVNDYRPISLLNTSMKLITKLLANRLQMKITDLVHKNQYGFI 1355

Query: 482  KERQIADCILLANEVADFLSKKSEGGLMLKVDLAKAYDQVDWEFLINMLHEMNFGDKWIS 541
            ++R I DC+  + E         +  +++K+D  KA+D+++ + ++ ++    FG KW++
Sbjct: 1356 RQRTIQDCLAWSFEYLHLCHHSRKAIVIIKLDFEKAFDKMNHKAMLTIMKAKGFGQKWLN 1415

Query: 542  WMKSCISSASLAILVNGSPTDFFSIEKGLRQGDPLSPLLFNLCLNGLSCLLNQFLGEENY 601
            WMKS  +S +  +L+NG+P       +G+RQGDPLSPLLF L  + L  L+N+    +  
Sbjct: 1416 WMKSIFTSGTSNVLLNGTPGKTIHCLRGVRQGDPLSPLLFVLAADFLQSLINKAKCMDLL 1475

Query: 602  -CGVRISRNLTINHLLFADDTLLFCENNELQLETLCNVLITFLFASGLKVNNQKSELIGC 660
               + +  N     + +ADDTL+  E +  QL  L +++ TF  A+GLKVN QKS ++  
Sbjct: 1476 KLPIPMQTNQDFPIIQYADDTLIIAEGDTRQLLILKSIINTFSEATGLKVNLQKSMMLPI 1535

Query: 661  NVQTVEVERLAHSFGWSVGTLPISYLGAPLGGNPRRIVFWNPMLEKLKCKTRSYNSKFMS 720
            N+    ++ LA +FG S G+ P +YLG PLG     I  + P++ K + +  S  + F+S
Sbjct: 1536 NMDEERLDTLARTFGCSKGSFPFTYLGLPLGITKPTIQDYQPLINKCEARLGSV-ATFLS 1594

Query: 721  LSGRLVITKSVLCSIPLFLMVVFKAPKGVILEVEKLFHAFIW-GQEQGRKKINWIGWDQI 779
             +GRL +T +V  ++P F M     PK VI +++K     +W G     +K     W  +
Sbjct: 1595 EAGRLELTNAVFTALPTFYMCTLAIPKSVIHKIDKFRKHCLWRGNGINARKPPKAAWKLV 1654

Query: 780  CLNRKAGGLGLGFIEWRNRGLLLKWAWRFGREINSLWRFFVIERYNLDPDSLIWHMASTT 839
            C  +  GGLG+  IE +N  LL+K   +F  + ++ W   + +++         +     
Sbjct: 1655 CKPKNEGGLGVIDIEKQNEALLMKNLDKFFNKKDTPWVQMIWDKH---------YAKGKL 1705

Query: 840  PAM---GSRAIQDIWRVLNEDHSLSAGFKENLLISIGDGSRVKFWRDPWVSNVALCHLFP 896
            P     GS   +DI ++L+        +KE  LI +  G  + FW+D W        + P
Sbjct: 1706 PGQIRKGSFWWRDILKLLDP-------YKEMSLIQMKGGESIVFWQDKWGMQKLRLEM-P 1757

Query: 897  RLYAMSENKEARIAEVGTYSRGKWGWSLTFRGQFFAWEEELYQQFLASINHIIPAAVGGD 956
             L++  ++K    AEV     G+  ++   +           QQ    I+++       +
Sbjct: 1758 ELFSFVQHKFLSAAEV----LGQEDFTRLLQLPISETAFHQLQQLTTRIDNLERTQ---E 1810

Query: 957  QLIWCANQTGLFSVKELCYWLEDHLFTHQMWQVPKSIAK-LLPPKVALFFWQAQNDKIAT 1015
            Q  W       FS  +    L  H    Q+ +V K I K    PK  +FFW    D+++T
Sbjct: 1811 QDQWKYKWGNNFSATKAYSELMGH---QQIHEVHKWIWKSFCQPKHKVFFWLLIKDRLST 1867

Query: 1016 RANLLARGIDLNGSTQCLFC-NAFDESCNHIFLHCHSIWSLWCVIVNRERFLWVMPASLA 1074
              N+L R      S  C+ C    +E+ +H+FLHC      W ++               
Sbjct: 1868 -CNILKRKNMQLQSYNCVLCLQNSEETTSHLFLHCAYARQCWQLLD-------------M 1913

Query: 1075 DLILEWDFLPKISD-------KSLWSLIPYALSWSIWIERNNICF 1112
            D+    DF P+I+D          + +    L W+IW  RNN+ F
Sbjct: 1914 DIPPNSDF-PEITDHFKHGFNNQFFMVTTILLCWAIWSTRNNLIF 1957


>UniRef100_O81068 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score =  287 bits (735), Expect = 1e-75
 Identities = 200/674 (29%), Positives = 326/674 (47%), Gaps = 46/674 (6%)

Query: 403  SGAWFEWMFEDFFSSGRISRGMNAAFITLIPKKENASSLNHYRPISLIRSSYKLIAKVLA 462
            +G  F    + FF  G + +G+NA  + LIPKK+ A  +  YRPIS     YK+I+K+LA
Sbjct: 785  TGPDFIAAIQSFFVKGFLPKGLNATILALIPKKDEAIEMKDYRPISCCNVLYKVISKILA 844

Query: 463  TRLQKVMPKLLSQNQFAFTKERQIADCILLANE-VADFLSKKSEGGLMLKVDLAKAYDQV 521
             RL+ ++P  + QNQ AF KER + + +LLA E V D+  +       +K+D++KA+D V
Sbjct: 845  NRLKLLLPSFILQNQSAFVKERLLMENVLLATELVKDYHKESVTPRCAMKIDISKAFDSV 904

Query: 522  DWEFLINMLHEMNFGDKWISWMKSCISSASLAILVNGSPTDFFSIEKGLRQGDPLSPLLF 581
             W+FL+N L  +NF + +  W+K CIS+A+ ++ VNG    FF   +GLRQG  LSP LF
Sbjct: 905  QWQFLLNTLEALNFPETFRHWIKLCISTATFSVQVNGELAGFFGSSRGLRQGCALSPYLF 964

Query: 582  NLCLNGLSCLLNQFLGEENYCGVRISRNLTINHLLFADDTLLFCENNELQLETLCNVLIT 641
             +C+N LS ++++     N         + + HL FADD ++F + ++  +E + NV   
Sbjct: 965  VICMNVLSHMIDEAAVHRNIGYHPKCEKIGLTHLCFADDLMVFVDGHQWSIEGVINVFKE 1024

Query: 642  FLFASGLKVNNQKSELIGCNVQTVEVERLAHSFGWSVGTLPISYLGAPLGGNPRRIVFWN 701
            F   SGL+++ +KS +    V   +  +   SF ++ G LP+ YLG PL         ++
Sbjct: 1025 FAGRSGLQISLEKSTIYLAGVSASDRVQTLSSFPFANGQLPVRYLGLPLLTKQMTTADYS 1084

Query: 702  PMLEKLKCKTRSYNSKFMSLSGRLVITKSVLCSIPLFLMVVFKAPKGVILEVEKLFHAFI 761
            P++E +K K  S+ ++ +S +GRL +  SV+ SI  F M  ++ P G I E+EKL  AF+
Sbjct: 1085 PLIEAVKTKISSWTARSLSYAGRLALLNSVIVSIANFWMSAYRLPAGCIREIEKLCSAFL 1144

Query: 762  WGQEQGRKKINWIGWDQICLNRKAGGLGLGFIEWRNRGLLLKWAWRFGREINSLW----R 817
            W       K   I W  IC  +K GGLG+  +   N+   LK  WR      SLW     
Sbjct: 1145 WSGPVLNPKKAKIAWSSICQPKKEGGLGIKSLAEANKVSCLKLIWRLLSTQPSLWVTWIW 1204

Query: 818  FFVIERYNLDPDSLIWHMASTTPAMGSRAIQDIWRVLNEDHSLSAGFKENLLISIGDGSR 877
             F+I +         W  A+   ++GS     +W+ L +   L+    +   + + +GS 
Sbjct: 1205 TFIIRK------GTFW-SANERSSLGSW----MWKKLLKYRELAKSMHK---VEVRNGSS 1250

Query: 878  VKFWRDPWVSNVALCHLFPRLYAMSENKEARIAEVGTYSRGKWGWSLTFRGQFFAWEEEL 937
              FW D W       HL  RL  ++  +  R+ ++G          L    Q       +
Sbjct: 1251 TSFWYDHW------SHL-GRLLDITGTR--RVIDLGIPLETNLETVLRTH-QHRQHRAAI 1300

Query: 938  YQQFLASINHI--IPAAVGGDQLIWCANQTGLFSVKELCYWLEDHLFTHQMWQ------- 988
            Y +  A I  +       G D  +W + +   F+ + +     +++ THQ  Q       
Sbjct: 1301 YNRINAEIQRLQQQEREAGPDISLWRSLKND-FNKRFITKVTWNNVRTHQPQQNWYKGVW 1359

Query: 989  VPKSIAKLLPPKVALFFWQAQNDKIATRANLLARGIDLNGSTQCLFCNAFDESCNHIFLH 1048
             P S      PK +   W    ++++T   +  +  +      C  CN  +E+ +H+F  
Sbjct: 1360 FPYS-----TPKYSFLLWLTVQNRLSTGDRI--KAWNSGQLVTCTLCNNAEETRDHLFFS 1412

Query: 1049 CHSIWSLWCVIVNR 1062
            C     +W  +  R
Sbjct: 1413 CQYTSYVWEALTQR 1426


>UniRef100_Q9C6L3 Hypothetical protein F2J7.11 [Arabidopsis thaliana]
          Length = 1213

 Score =  286 bits (732), Expect = 3e-75
 Identities = 224/740 (30%), Positives = 352/740 (47%), Gaps = 47/740 (6%)

Query: 389  PQGLTA-LI*NSFRNSGAWFEWMFEDFFSSGRISRGMNAAFITLIPKKENASSLNHYRPI 447
            P G TA    +S+   GA      ++FFSSG + +  NA  I LIPK  N +  + +RPI
Sbjct: 467  PDGFTAEFFIDSWSIVGAEVTDAIKEFFSSGCLLKQWNATTIVLIPKIVNPTCTSDFRPI 526

Query: 448  SLIRSSYKLIAKVLATRLQKVMPKLLSQNQFAFTKERQIADCILLANEVADFL--SKKSE 505
            S + + YK+IA++L  RLQ+++  ++S  Q AF   R +A+ +LLA ++      S  S 
Sbjct: 527  SCLNTLYKVIARLLTDRLQRLLSGVISSAQSAFLPGRSLAENVLLATDLVHGYNWSNISP 586

Query: 506  GGLMLKVDLAKAYDQVDWEFLINMLHEMNFGDKWISWMKSCISSASLAILVNGSPTDFFS 565
             G MLKVDL KA+D V WEF+I  L  +   +K+I+W+  CIS+ +  + +NG    FF 
Sbjct: 587  RG-MLKVDLKKAFDSVRWEFVIAALRALAIPEKFINWISQCISTPTFTVSINGGNGGFFK 645

Query: 566  IEKGLRQGDPLSPLLFNLCLNGLSCLLNQFLGEENYCGVRISRNLTINHLLFADDTLLFC 625
              KGLRQGDPLSP LF L +   S LL+             + NL+I+HL+FADD ++F 
Sbjct: 646  STKGLRQGDPLSPYLFVLAMEAFSNLLHSRYESGLIHYHPKASNLSISHLMFADDVMIFF 705

Query: 626  ENNELQLETLCNVLITFLFASGLKVNNQKSELIGCNVQTVEVERLAHSFGWSVGTLPISY 685
            +     L  +C  L  F   SGLKVN  KS L    +  +E    A ++G+ +GTLPI Y
Sbjct: 706  DGGSFSLHGICETLDDFASWSGLKVNKDKSHLYLAGLNQLESNANA-AYGFPIGTLPIRY 764

Query: 686  LGAPLGGNPRRIVFWNPMLEKLKCKTRSYNSKFMSLSGRLVITKSVLCSIPLFLMVVFKA 745
            LG PL     RI  + P+LEK+  + RS+ +K +S +GR+ +  SV+     F M  F  
Sbjct: 765  LGLPLMNRKLRIAEYEPLLEKITARFRSWVNKCLSFAGRIQLISSVIFGSINFWMSTFLL 824

Query: 746  PKGVILEVEKLFHAFIWGQEQGRKKINWIGWDQICLNRKAGGLGL-GFIEWRNRGLLLKW 804
            PKG I  +E L   F+W     + K   + W  +CL +  GGLGL   +EW N+ L ++ 
Sbjct: 825  PKGCIKRIESLCSRFLWSGNIEQAKGIKVSWAALCLPKSEGGLGLRRLLEW-NKTLSMRL 883

Query: 805  AWRFGREINSLWRFFVIERYNLDPDSLIWHMASTTPAMGSRAIQDIWRVLNEDHSLSAGF 864
             WR     +SLW  +    ++L   S  W +       G ++    W+ L     L+  F
Sbjct: 884  IWRLFVAKDSLWADWQ-HLHHLSRGS-FWAVE------GGQSDSWTWKRLLSLRPLAHQF 935

Query: 865  KENLLISIGDGSRVKFWRDPWVSNVALCHLFPRLYAMSENKEARIAEVGTYSRGKWGWSL 924
               L+  +G+G +  +W D W S   L  +   +   S  +   +A+V + +  + GW L
Sbjct: 936  ---LVCKVGNGLKADYWYDNWTSLGPLFRIIGDI-GPSSLRVPLLAKVAS-AFSEDGWRL 990

Query: 925  TFRGQFFAWEEELYQQFLASINHIIPAAVGGDQLIWCANQTGLFSVKELCYWLEDHLFTH 984
                   A   +     L ++     A    D+  W  N            +L       
Sbjct: 991  PVSRSAPA---KGIHDHLCTVPVPSTAQEDVDRYEWSVNG-----------FLCQGFSAA 1036

Query: 985  QMWQV--PKSIAKL---------LPPKVALFFWQAQNDKIATRANLLARGIDLNGSTQCL 1033
            + W+   PK+  K            PK A   W +  +++ TR  L + G     S  C+
Sbjct: 1037 KTWEAIRPKATVKSWASSIWFKGAVPKYAFNMWVSHLNRLLTRQRLASWG--HIQSDACV 1094

Query: 1034 FCNAFDESCNHIFLHCHSIWSLWCVIVNRERFLWVMPASLADLILEWDFLPKISDKSLWS 1093
             C+   ES +H+ L C     +W ++  R      + +S ++L+         +   L  
Sbjct: 1095 LCSFASESRDHLLLICEFSAQVWRLVFRRICPRQRLFSSWSELLSWVRQSSPEAPPLLRK 1154

Query: 1094 LIPYALSWSIWIERNNICFN 1113
            ++   + +++W +RNN+  N
Sbjct: 1155 IVSQVVVYNLWRQRNNLLHN 1174


>UniRef100_O22220 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1094

 Score =  285 bits (729), Expect = 6e-75
 Identities = 196/664 (29%), Positives = 319/664 (47%), Gaps = 45/664 (6%)

Query: 412  EDFFSSGRISRGMNAAFITLIPKKENASSLNHYRPISLIRSSYKLIAKVLATRLQKVMPK 471
            E FF +G +    N   + LIPK    + +   RPISL    YK+I+K+L+ RL+K +P 
Sbjct: 201  ELFFQTGILPEDWNHTHLCLIPKITKPARMADIRPISLCSVMYKIISKILSARLKKYLPV 260

Query: 472  LLSQNQFAFTKERQIADCILLANEVADFL---SKKSEGGLMLKVDLAKAYDQVDWEFLIN 528
            ++S  Q AF  ER ++D I+LA+E+   L    K S+  ++ K D++KAYD+V+W FL  
Sbjct: 261  IVSPTQSAFVAERLVSDNIILAHEIVHNLRTNEKISKDFMVFKTDMSKAYDRVEWPFLKG 320

Query: 529  MLHEMNFGDKWISWMKSCISSASLAILVNGSPTDFFSIEKGLRQGDPLSPLLFNLCLNGL 588
            +L  + F   WI+WM +C+SS S ++L+NG P    +  +GLRQGDPLSP LF LC   L
Sbjct: 321  ILLALGFNSTWINWMMACVSSVSYSVLINGQPFGHITPHRGLRQGDPLSPFLFVLCTEAL 380

Query: 589  SCLLNQFLGEENYCGVRIS-RNLTINHLLFADDTLLFCENNELQLETLCNVLITFLFASG 647
              +LNQ        G++ +    ++NHLLFADDTLL C+ ++L+   + + L  +   SG
Sbjct: 381  IHILNQAEKIGKISGIQFNGTGPSVNHLLFADDTLLICKASQLECAEIMHCLSQYGHISG 440

Query: 648  LKVNNQKSEL-IGCNVQTVEVERLAHSFGWSVGTLPISYLGAPLGGNPRRIVFWNPMLEK 706
              +N++KS +  G  V     + + +  G         YLG P      + V +  + EK
Sbjct: 441  QMINSEKSAITFGAKVNEETKQWIMNRSGIQTEGGTGKYLGLPECFQGSKQVLFGFIKEK 500

Query: 707  LKCKTRSYNSKFMSLSGRLVITKSVLCSIPLFLMVVFKAPKGVILEVEKLFHAFIWGQEQ 766
            L+ +   + +K +S  G+ ++ KS+  + P++ M  F+  K +  ++  +   F W   Q
Sbjct: 501  LQSRLSGWYAKTLSQGGKDILLKSIAMAFPVYAMTCFRLSKTLCTKLTSVMMDFWWNSVQ 560

Query: 767  GRKKINWIGWDQICLNRKAGGLGLGFIEWRNRGLLLKWAWRFGREINSLWRFFVIERYNL 826
             +KKI+WIG  ++ L +  GG G   ++  N+ LL K A R   + +SL    +  RY +
Sbjct: 561  DKKKIHWIGAQKLMLPKFLGGFGFKDLQCFNQALLAKQASRLHTDSDSLLSQILKSRYYM 620

Query: 827  DPDSLIWHMASTTPAMGSRAIQDIWRVLNEDHSLSAGFKENLLISIGDGSRVKFWRDPWV 886
            + D L       +   G+R       +L     L +G K+     IG+G     W D W+
Sbjct: 621  NSDFL-------SATKGTRPSYAWQSILYGRELLVSGLKK----IIGNGENTYVWMDNWI 669

Query: 887  SNVALCHLFPRLYAMSENKEARIAE-VGTYSRGKWGWSLTFRGQFFAWEEELYQQFLASI 945
             +       P    +  + + ++++ +  +SR    W+L      F W+E      +  I
Sbjct: 670  FDDKPRR--PESLQIMVDIQLKVSQLIDPFSRN---WNLNMLRDLFPWKE------IQII 718

Query: 946  NHIIPAAVGGDQLIWCANQTGLFSVKELCYWLEDHLFTHQMWQVPKSIAKLLP------- 998
                P A   D   W     GL++VK   Y L       QM++  +    L P       
Sbjct: 719  CQQRPMASRQDSFCWFGTNHGLYTVKSE-YDLCSRQVHKQMFKEAEEQPSLNPLFGKIWN 777

Query: 999  ----PKVALFFWQAQNDKIATRANLLARGIDLNGSTQCLFCNAFDESCNHIFLHC---HS 1051
                PK+ +F W+     +A    L  RG+ +     C  C   +E+ NHI   C     
Sbjct: 778  LNSAPKIKVFLWKVLKGAVAVEDRLRTRGVLIEDG--CSMCPEKNETLNHILFQCPLARQ 835

Query: 1052 IWSL 1055
            +W+L
Sbjct: 836  VWAL 839


>UniRef100_O82216 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1216

 Score =  282 bits (721), Expect = 5e-74
 Identities = 214/732 (29%), Positives = 353/732 (47%), Gaps = 60/732 (8%)

Query: 412  EDFFSSGRISRGMNAAFITLIPKKENASSLNHYRPISLIRSSYKLIAKVLATRLQKVMPK 471
            + FF+ G + +G+N+  + LIPKK+ A  +  YRPIS     YK I+K+LA RL++++PK
Sbjct: 218  QSFFAKGFLPKGVNSTILALIPKKKEAREIKDYRPISCCNVLYKAISKILANRLKRILPK 277

Query: 472  LLSQNQFAFTKERQIADCILLANE-VADFLSKKSEGGLMLKVDLAKAYDQVDWEFLINML 530
             +  NQ AF K+R + + +LLA E V D+          +K+D++KA+D + W FL ++L
Sbjct: 278  FIVGNQSAFVKDRLLIENVLLATELVKDYHKDSISTRCAMKIDISKAFDSLQWSFLTHVL 337

Query: 531  HEMNFGDKWISWMKSCISSASLAILVNGSPTDFFSIEKGLRQGDPLSPLLFNLCLNGLSC 590
              MNF  ++I W+  C+S+AS +I VNG    +F   +GLRQG  LSP LF + ++ LS 
Sbjct: 338  AAMNFPGEFIHWISLCMSTASFSIQVNGELAGYFRSARGLRQGCSLSPYLFVISMDVLSR 397

Query: 591  LLNQFLGEENYCGVRISRNLTINHLLFADDTLLFCENNELQLETLCNVLITFLFASGLKV 650
            +L++  G   +      + L + HL FADD ++  +     ++ +  VL  F    GLK+
Sbjct: 398  MLDKAAGAREFGYHPRCKTLGLTHLCFADDLMILTDGKIRSVDGIVKVLNQFAAKLGLKI 457

Query: 651  NNQKSELIGCNVQTVEVERLAHSFGWSVGTLPISYLGAPLGGNPRRIVFWNPMLEKLKCK 710
              +K+ L    V     + ++  + + VG LP+ YLG PL         ++P++++++ +
Sbjct: 458  CMEKTTLYLAGVSDHSRQLMSSRYSFGVGKLPVRYLGLPLVTKRLTTSDYSPLIDQIRRR 517

Query: 711  TRSYNSKFMSLSGRLVITKSVLCSIPLFLMVVFKAPKGVILEVEKLFHAFIWGQEQGRKK 770
               + S+++S +GRL +  SVL SI  F M  F+ P+  I E+ ++  A +W   +   K
Sbjct: 518  IGMWTSRYLSFAGRLSLINSVLWSITNFWMNAFRLPRECINEINRISSALLWSGPELNPK 577

Query: 771  INWIGWDQICLNRKAGGLGLGFIEWRNRGLLLKWAWRFGREINSLWRFFVIERYNLDPDS 830
               + WD+IC  +K GGLGL  +   N+   LK  WR     +SLW  +   R NL    
Sbjct: 578  KAKVSWDEICKPKKEGGLGLQSLREANKVSSLKLIWRLLSCQDSLWVKWT--RMNLLKKE 635

Query: 831  LIWHMASTTPAMGSRAIQDIWRVLNEDHSLSAGFKENLLISIGDGSRVKFWRDPWVSNVA 890
              W +  T   +GS     IWR L +   ++  F +   I + +G    FW D W     
Sbjct: 636  SFWSI-GTHSTLGSW----IWRRLLKHREVAKSFCK---IEVNNGVNTSFWFDNWSEKGP 687

Query: 891  LCHLFPRLYA--MSENKEARIAEVGTYSRGKWGWSLTFRGQFFAWEEELYQQFLASINHI 948
            L +L     A  M  ++   +AE  +  R K       R +     EE+  Q     N  
Sbjct: 688  LINLTGARGAIDMGISRHMTLAEAWSRRRRK-----RHRVEILNEFEEILLQKYQHRNIE 742

Query: 949  IPAAVGGDQLIWCANQ---TGLFSVKELCYWLEDHLFT---HQMWQVPKSIAKLLPPKVA 1002
            +      D ++W   +      FS K+   W  +H+ T    + W      A    PK +
Sbjct: 743  LE-----DAILWRGKEDVFKARFSTKDT--W--NHIRTSSNQRAWHKGVWFAH-ATPKFS 792

Query: 1003 LFFWQAQNDKIATRANLLARGIDLNGS-TQCLFCNAFDESCNHIFLHC---HSIWSLWCV 1058
               W A  ++++T   ++      NG+ T C+FC++  E+ +H+F  C     IW+    
Sbjct: 793  FCAWLAIRNRLSTGDRMMTWN---NGTPTTCVFCSSPMETRDHLFFQCCYSSEIWTSIAK 849

Query: 1059 IVNRERFLWVMPASLADLILEWDFLPK-ISD------KSLWSLIPYALS-WSIWIERNNI 1110
             V ++RF             +W  +   ISD      +S  S   + +S  SIW ERN+ 
Sbjct: 850  NVYKDRF-----------STKWSAVVNYISDSQPDRIQSFLSRYTFQVSIHSIWRERNSR 898

Query: 1111 CFNHKALNISEI 1122
                K+ + S +
Sbjct: 899  RHGEKSRSASNL 910


>UniRef100_Q9FZG5 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score =  281 bits (718), Expect = 1e-73
 Identities = 163/484 (33%), Positives = 263/484 (53%), Gaps = 11/484 (2%)

Query: 403 SGAWFEWMFEDFFSSGRISRGMNAAFITLIPKKENASSLNHYRPISLIRSSYKLIAKVLA 462
           +G  F    + FF  G + +G+NA  + LIPKK+ A+ +  YRPIS     YK+I+K++A
Sbjct: 61  TGQDFIAAIKSFFIKGFLPKGLNATILALIPKKDEATLMRDYRPISCCNVIYKVISKIIA 120

Query: 463 TRLQKVMPKLLSQNQFAFTKERQIADCILLANE-VADFLSKKSEGGLMLKVDLAKAYDQV 521
            RL+ ++P  + QNQ AF +ER + + +LLA E V D+          +K+D++KA+D V
Sbjct: 121 NRLKVMLPTFILQNQSAFVRERLLIENVLLATELVKDYHKDSISPRCAMKIDISKAFDSV 180

Query: 522 DWEFLINMLHEMNFGDKWISWMKSCISSASLAILVNGSPTDFFSIEKGLRQGDPLSPLLF 581
            W+FL+N L  +NF + +  W+K CIS+A+ ++ VNG    FF  ++GLRQG  LSP LF
Sbjct: 181 QWQFLLNTLEALNFPENFCHWIKLCISTATFSVQVNGELAGFFGSKRGLRQGCALSPYLF 240

Query: 582 NLCLNGLSCLLNQFLGEENYCGVRISRNLTINHLLFADDTLLFCENNELQLETLCNVLIT 641
            +C+N LS +++      N       + L++ HL FADD ++F +  +  +E + N+   
Sbjct: 241 VICMNVLSHMIDVAAVHRNIGYHPKCKKLSLTHLCFADDLMVFIDGQQRSVEGVINIFKE 300

Query: 642 FLFASGLKVNNQKSELIGCNVQTVEVERLAHSFGWSVGTLPISYLGAPLGGNPRRIVFWN 701
           F   SGL ++ +KS L    V  +    +  +F ++ G LP+ YLG PL         ++
Sbjct: 301 FAGKSGLHISLEKSTLYLAGVSELNRNNILSAFPFASGQLPVRYLGLPLLTKQMTTADYS 360

Query: 702 PMLEKLKCKTRSYNSKFMSLSGRLVITKSVLCSIPLFLMVVFKAPKGVILEVEKLFHAFI 761
           P+L+K++ K  S+ ++ +S +GRL +  SV+ S+  F M  ++ P G I E+EKL  AF+
Sbjct: 361 PLLDKVRSKISSWTARSLSYAGRLALINSVIVSLSNFWMSAYRLPAGCIKEIEKLCSAFL 420

Query: 762 WGQEQGRKKINWIGWDQICLNRKAGGLGLGFIEWRNRGLLLKWAWRFGREINSLWRFFVI 821
           W   +   K   I W  +C  ++ GGLG+  +   N+   LK  WR     +SLW  +V 
Sbjct: 421 WSGPELNPKKAKITWTSLCKLKQEGGLGIKSLLEANKVSCLKLIWRLVSRQSSLWVNWV- 479

Query: 822 ERYNLDPDSLIWHMASTTPAMGSRAIQDIWRVLNEDHSLSAGFKENLLISIGDGSRVKFW 881
             Y +   S  W  A+   ++GS     +W+ L +   ++   K    + I  GS   FW
Sbjct: 480 WTYIIRKGS-FW-SANDRSSLGSW----MWKKLLKYRDVA---KSMCKVEIKSGSSTSFW 530

Query: 882 RDPW 885
            D W
Sbjct: 531 YDNW 534


>UniRef100_Q9FL83 Non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score =  275 bits (704), Expect = 5e-72
 Identities = 192/677 (28%), Positives = 324/677 (47%), Gaps = 67/677 (9%)

Query: 404  GAWFEWMFEDFFSSGRISRGMNAAFITLIPKKENASSLNHYRPISLIRSSYKLIAKVLAT 463
            G  F    + FF+ G + +G+N+  + LIPKK  A  +  YRPIS     YK+I+K++A 
Sbjct: 489  GDEFTLAVQSFFTKGFLPKGINSTILALIPKKTEAREMKDYRPISCCNVLYKVISKIIAN 548

Query: 464  RLQKVMPKLLSQNQFAFTKERQIADCILLANE-VADFLSKKSEGGLMLKVDLAKAYDQVD 522
            RL+ V+PK ++ NQ AF K+R + + +LLA E V D+          +K+D++KA+D V 
Sbjct: 549  RLKLVLPKFIAGNQSAFVKDRLLIENLLLATELVKDYHKDTISTRCAIKIDISKAFDSVQ 608

Query: 523  WEFLINMLHEMNFGDKWISWMKSCISSASLAILVNGSPTDFFSIEKGLRQGDPLSPLLFN 582
            W FLIN+   + F  ++I W+  CI++AS ++ VNG    +F   +GLRQG  LSP LF 
Sbjct: 609  WPFLINVFTILGFPREFIHWINICITTASFSVQVNGELAGYFQSSRGLRQGCALSPYLFV 668

Query: 583  LCLNGLSCLLNQFLGEENYCGVRISRNLTINHLLFADDTLLFCENNELQLETLCNVLITF 642
            +C++ LS +L++     ++      + + + HL FADD ++  +     +E +  V   F
Sbjct: 669  ICMDVLSKMLDKAAAARHFGYHPKCKTMGLTHLSFADDLMVLSDGKIRSIERIIKVFDEF 728

Query: 643  LFASGLKVNNQKSELIGCNVQTVEVERLAHSFGWSVGTLPISYLGAPLGGNPRRIVFWNP 702
               SGL+++ +KS +    +       +A  F +S G LP+ YLG PL           P
Sbjct: 729  AKWSGLRISLEKSTVYLAGLSATARNEVADRFPFSSGQLPVRYLGLPLITKRLSTTDCLP 788

Query: 703  MLEKLKCKTRSYNSKFMSLSGRLVITKSVLCSIPLFLMVVFKAPKGVILEVEKLFHAFIW 762
            +LE+++ +  S+ S+F+S +GRL +  SVL SI  F +  F+ P+  I E+EK+  AF+W
Sbjct: 789  LLEQVRKRIGSWTSRFLSYAGRLNLISSVLWSICNFWLAAFRLPRKCIRELEKMCSAFLW 848

Query: 763  -GQEQGRKKINWIGWDQICLNRKAGGLGLGFIEWRNRGLLLKWAWRFGREINSLWRFFVI 821
             G E    K   I W  +C  +  GGLGL  ++  N    LK  W+     NSLW  +V 
Sbjct: 849  SGTEMNSNKAK-ISWHMVCKPKDEGGLGLRSLKEANDVCCLKLVWKIVSHSNSLWVKWVD 907

Query: 822  ERYNLDPDSLIWHMASTTPAMGSRAIQDIWRVLNEDHSLSAGFKENLLISIGDGSRVKFW 881
            +  +L  ++  W +  T  + GS     IW+ L +   ++    +   + +G+G +  FW
Sbjct: 908  Q--HLLRNASFWEVKQTV-SQGSW----IWKKLLKYREVAKTLSK---VEVGNGKQTSFW 957

Query: 882  RDPWVSNVALCHLFPRLYAMSENKEARIAEVGTYSRGKWGWSLTFRGQFFAWEEELYQQF 941
             D W     L         +    +  + ++G   R      +T      AW     ++ 
Sbjct: 958  YDNWSDLGQL---------LERTGDRGLIDLGISRR------MTVEE---AWTNRRQRRH 999

Query: 942  LASINHIIPAAV---------GGDQLIWCANQTGLFSVKELCYWLEDHLFTHQMWQVPKS 992
               + ++I  A+           D+++W   ++ +F              T   W   +S
Sbjct: 1000 RNDVYNVIEDALKKSWDTRTETEDKVLW-RGKSDVFRTT---------FSTRDTWHHTRS 1049

Query: 993  IAKLLP-----------PKVALFFWQAQNDKIATRANLL--ARGIDLNGSTQCLFCNAFD 1039
             +  +P           PK +   W A + ++ T   ++  A GI    +T C+FC    
Sbjct: 1050 TSARVPWHKVIWFSHATPKYSFCSWLAAHGRLPTGDRMINWANGI----ATDCIFCQGTL 1105

Query: 1040 ESCNHIFLHCHSIWSLW 1056
            E+ +H+F  C     +W
Sbjct: 1106 ETRDHLFFTCSFTSVIW 1122


>UniRef100_Q75M12 Hypothetical protein P0676G05.2 [Oryza sativa]
          Length = 1936

 Score =  274 bits (701), Expect = 1e-71
 Identities = 211/715 (29%), Positives = 337/715 (46%), Gaps = 64/715 (8%)

Query: 381  LNPLTAIKPQGLTALI*NSFRNSGAWFEWMF---EDFFSSGRISRGMNAAFITLIPKKEN 437
            + PL + +P G  A      RN G     +     +FF SG + +G+N   I LIPKK+ 
Sbjct: 1080 IGPLKSPRPDGFPARFYQ--RNWGTLKSDIILAVRNFFQSGLMPKGVNDTAIVLIPKKDQ 1137

Query: 438  ASSLNHYRPISLIRSSYKLIAKVLATRLQKVMPKLLSQNQFAFTKERQIADCILLANEVA 497
               L  YRPISL    YK+++K L  RL+ ++  L+S+ Q AF + R I D  LLA E  
Sbjct: 1138 PIDLKDYRPISLCNVVYKVVSKCLVNRLRPILDDLVSKEQSAFIQGRMITDNALLAFECF 1197

Query: 498  DFLSKKSEGG---LMLKVDLAKAYDQVDWEFLINMLHEMNFGDKWISWMKSCISSASLAI 554
              + K  +        K+DL+KAYD+VDW FL   L+++ F  +W+SW+  C+++   ++
Sbjct: 1198 HSIQKNKKANSAACAYKLDLSKAYDRVDWRFLELALNKLGFAHRWVSWIMLCVTTVRYSV 1257

Query: 555  LVNGSPTDFFSIEKGLRQGDPLSPLLFNLCLNGLSCLLNQFLGEENYCGVRISRNLT-IN 613
              NG+    F+  +GLRQG+PLSP LF    +GLS LL + + + +   ++I R    I+
Sbjct: 1258 KFNGTLLRSFAPTRGLRQGEPLSPFLFLFVADGLSLLLKEKVAQNSLTPLKICRQAPGIS 1317

Query: 614  HLLFADDTLLFCENNELQLETLCNVLITFLFASGLKVNNQKSELIGCNVQTVEV-ERLAH 672
            +LLFADDTLLF +  + + E +  VL  +   +G  +N  K  ++        V E + +
Sbjct: 1318 YLLFADDTLLFFKAEKKEAEVVKEVLTNYAQGTGQLINPAKCSILFGEASPSSVSEDIRN 1377

Query: 673  SFGWSVGTLPISYLGAPLGGNPRRIVFWNPMLEKLKCKTRSYNSKFMSLSGRLVITKSVL 732
            +           YLG P          +  +  K+  +   +   F+S  G+ ++ K+V+
Sbjct: 1378 TLQVERDNFEDRYLGFPTPEGRMHKGRFQSLQAKIAKRVIQWGENFLSSGGKEILIKAVI 1437

Query: 733  CSIPLFLMVVFKAPKGVILEVEKLFHAFIWGQEQGRKKINWIGWDQICLNRKAGGLGLGF 792
             +IP+++M +FK P  V  E+ K+   F WG + GR++ +W  WD +   +  GGLG   
Sbjct: 1438 QAIPVYVMGLFKFPDSVYDELTKMTRNFWWGADNGRRRTHWRAWDSLTKAKINGGLGFRD 1497

Query: 793  IEWRNRGLLLKWAWRFGREINSLWRFFVIERYNLDPDSLIWHMASTTPAMGSRAIQDIWR 852
             +  N+ LL + AWR     NSL    +  +Y        +   S T    S      W 
Sbjct: 1498 YKLFNQALLTRQAWRLIEFPNSLCAQVLKAKY--------FPHGSLTDTTFSANASPTWH 1549

Query: 853  VLNEDHSLSAGFKENLLISIGDGSRVKFWRDPW---------VSNVALCHLFPRLYAMSE 903
             +     L    K+ ++  IG+G+ V+ WRDPW         VS+ A C    RL  +S+
Sbjct: 1550 GIEYGLDL---LKKGIIWRIGNGNSVRIWRDPWIPRDLSRRPVSSKANC----RLKWVSD 1602

Query: 904  NKEARIAEVGTYSRGKWGWSLTFRGQFFAWEEELYQQFLASINHIIPAAVGGDQLIWCAN 963
                 IAE GT+   K          F   + ++ Q+        I A +  D + W  +
Sbjct: 1603 ----LIAEDGTWDSAK------INQYFLKIDADIIQKI------CISARLEEDFIAWHPD 1646

Query: 964  QTGLFSVK---ELCYWLED--HLFTHQMWQVPKSIAKL----LPPKVALFFWQAQNDKIA 1014
            +TG FSV+   +L   L D  +  +    ++ KS   +    +P KV +F W+  ++ +A
Sbjct: 1647 KTGRFSVRSAYKLALQLADMNNCSSSSSSRLNKSWELIWKCNVPQKVRIFAWRVASNSLA 1706

Query: 1015 TRANLLARGIDLNGSTQCLFCNAFDESCNHIFLHCHSIWSLWCVIVNRERFLWVM 1069
            T  N   R  +L     C  C+   E   H    C    SLW   VN E+  +V+
Sbjct: 1707 TMENKKKR--NLERFDVCGICDREKEDAGHALCRCVHANSLW---VNLEKGKYVV 1756



 Score = 40.4 bits (93), Expect = 0.36
 Identities = 40/143 (27%), Positives = 60/143 (40%), Gaps = 2/143 (1%)

Query: 1169 WVTPDAGLIKINVDGAAKGSPGRCGIGGILRN-NANVILGFFSKSVGEGYAFEAEVLAIH 1227
            W  P  G +K+NVDG+   +  + GIG ILRN   NVI              EAE+ A  
Sbjct: 1777 WERPRNGWMKLNVDGSFDINSEKGGIGMILRNCLGNVIFSSCRSLDSCSGPLEAELHACV 1836

Query: 1228 EALLFCVQRQLRNIIIESDSSLAVGWVNNRCNRPWKLLNKLNQIDRWLVETNCLKVNHIY 1287
            E L   +   L  I +E+D S  +  +N+       L N   +    +     + ++ + 
Sbjct: 1837 EGLHLALHWTLLPIQVETDCSSVIQLLNHPDKDRSVLANIAQEAKSLMAGDRQIAISKVQ 1896

Query: 1288 REANGEADKLA-KRGAEYPNDLW 1309
            R  N  +  LA K  AE  +  W
Sbjct: 1897 RSQNVISHFLANKARAESLSSFW 1919


>UniRef100_Q9M1N9 Hypothetical protein T18B22.50 [Arabidopsis thaliana]
          Length = 762

 Score =  272 bits (695), Expect = 6e-71
 Identities = 194/682 (28%), Positives = 321/682 (46%), Gaps = 49/682 (7%)

Query: 389  PQGLTA-LI*NSFRNSGAWFEWMFEDFFSSGRISRGMNAAFITLIPKKENASSLNHYRPI 447
            P G T+     S+   G  F    + FF+ G + +G+N+  + LIPKK  +  +  YRPI
Sbjct: 26   PDGFTSEFFKESWEILGPEFILAIQSFFALGFLPKGVNSTILALIPKKLESKEMKDYRPI 85

Query: 448  SLIRSSYKLIAKVLATRLQKVMPKLLSQNQFAFTKERQIADCILLANE-VADFLSKKSEG 506
            S     YK+I+K+LA RL+ ++P+ ++ NQ +F K+R + + +LLA + V D+       
Sbjct: 86   SCCNVMYKVISKILANRLKLLLPQFIAGNQSSFVKDRLLIENVLLATDLVKDYHKDSISE 145

Query: 507  GLMLKVDLAKAYDQVDWEFLINMLHEMNFGDKWISWMKSCISSASLAILVNGSPTDFFSI 566
               +K+D++KA D V W FLIN L  M+F + +I W++ CI++ S ++ VNG    FF  
Sbjct: 146  RCAIKIDISKASDSVQWSFLINTLTAMHFPEMFIHWIRLCITTPSFSVQVNGELAGFFQS 205

Query: 567  EKGLRQGDPLSPLLFNLCLNGLSCLLNQFLGEENYCGVRISRNLTINHLLFADDTLLFCE 626
             +GLRQG  LSP LF +C++ LS LL++ +G          + + + HL FADD ++  +
Sbjct: 206  SRGLRQGCALSPYLFVICMDVLSKLLDKVVGIGRIGYHPHCKRMGLTHLSFADDLMILTD 265

Query: 627  NNELQLETLCNVLITFLFASGLKVNNQKSELIGCNVQTVEVERLAHSFGWSVGTLPISYL 686
                 +E +  V   F   SGLK++ +KS +    + +    +L   F + VG LPI YL
Sbjct: 266  GQCRSIEGIIEVFDLFSKWSGLKISMEKSTIFSAGLSSTSRAQLHTHFPFEVGELPIRYL 325

Query: 687  GAPLGGNPRRIVFWNPMLEKLKCKTRSYNSKFMSLSGRLVITKSVLCSIPLFLMVVFKAP 746
            G PL       V + P++E+++ +  S++S+F+S +GR  +  S++ S   F +  F+ P
Sbjct: 326  GLPLVTKRLSSVDYAPLIEQIRKRIGSWSSRFLSFAGRFNLISSIIWSSCNFWLSAFQLP 385

Query: 747  KGVILEVEKLFHAFIWGQEQGRKKINWIGWDQICLNRKAGGLGLGFIEWRNRGLLLKWAW 806
            +  I E+EKL  +F+W       K   I W+Q+C  +  GGLGL  ++  N    LK  W
Sbjct: 386  RACIQEIEKLCSSFLWSGTNLNSKKAKISWNQVCKPKSEGGLGLRSLKEANDVCCLKLVW 445

Query: 807  RFGREINSLWRFFVIERYNLDPDSLIWHMASTTPAMGSRAIQDIWRVLNEDHSLSAGFKE 866
            R     +SLW  +V   +NL    + W +      +GS     IW+ + +   ++  F +
Sbjct: 446  RIISHGDSLWVKWV--EHNLLKREIFW-IVKENANLGSW----IWKKILKYRGVAKRFCK 498

Query: 867  NLLISIGDGSRVKFWRDPWVSNVALCHL--FPRLYAMSENKEARIAEVGTYSRGKWGWSL 924
                 +G+G    FW D W     L  +        M  ++   +A+  T  R       
Sbjct: 499  ---AEVGNGESTSFWFDDWSLLGRLIDVAGIRGTIDMGISRTMSVADAWTSRR------- 548

Query: 925  TFRGQFFAWEEELYQQFLASINHIIPAAVGGDQLIWCANQTGLFSVKELCYWLEDHLFTH 984
                          Q+ L +I  ++       Q      Q G    K      +D   T 
Sbjct: 549  ---------RRHHRQEILNTIEEVLSTQ---HQKRTQQQQQGRVLWKGKNDIYKDKFSTK 596

Query: 985  QMWQVPKSIAKLL-----------PPKVALFFWQAQNDKIATRANLLARGIDLNGSTQCL 1033
              W   ++ +  +            PK +   W A +D++AT A ++       G   C 
Sbjct: 597  NTWNYLRTTSNEVAWHKGVWFPHATPKYSFCLWLAAHDRLATGARMIKWNRGETG--DCT 654

Query: 1034 FCNAFDESCNHIF---LHCHSI 1052
            FC    E+ +H+F   LH  S+
Sbjct: 655  FCRQGIETRDHLFFMQLHIGSL 676


  Database: uniref100
    Posted date:  Jan 5, 2005  1:24 AM
  Number of letters in database: 848,049,833
  Number of sequences in database:  2,790,947
  
Lambda     K      H
   0.335    0.145    0.488 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,152,357,513
Number of Sequences: 2790947
Number of extensions: 88401014
Number of successful extensions: 283142
Number of sequences better than 10.0: 1373
Number of HSP's better than 10.0 without gapping: 856
Number of HSP's successfully gapped in prelim test: 517
Number of HSP's that attempted gapping in prelim test: 279869
Number of HSP's gapped (non-prelim): 2111
length of query: 1310
length of database: 848,049,833
effective HSP length: 139
effective length of query: 1171
effective length of database: 460,108,200
effective search space: 538786702200
effective search space used: 538786702200
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.6 bits)
S2: 81 (35.8 bits)