BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0007.11
(264 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q9ZP08 Chlorophyll a/b binding protein precursor [Cice... 518 e-146
UniRef100_O81391 Chlorophyll a/b binding protein [Medicago sativa] 514 e-144
UniRef100_Q6T705 Chlorophyll a/b binding protein [Trifolium prat... 509 e-143
UniRef100_P07371 Chlorophyll a-b binding protein AB80, chloropla... 505 e-142
UniRef100_Q43437 Photosystem II type I chlorophyll a/b-binding p... 503 e-141
UniRef100_Q9LKI0 LHCII type I chlorophyll a/b-binding protein [P... 503 e-141
UniRef100_P27490 Chlorophyll a-b binding protein 8, chloroplast ... 502 e-141
UniRef100_P09756 Chlorophyll a-b binding protein 3, chloroplast ... 502 e-141
UniRef100_O48657 Chlorophyll a/b-binding protein precursor [Fagu... 500 e-140
UniRef100_Q39831 Chlorophyll a/b-binding protein [Glycine max] 500 e-140
UniRef100_P27495 Chlorophyll a-b binding protein 40, chloroplast... 497 e-139
UniRef100_Q9LKH9 LHCII type I chlorophyll a/b-binding protein [P... 496 e-139
UniRef100_Q9M600 Chlorophyll a/b binding protein precursor [Euph... 494 e-139
UniRef100_O64449 Light harvesting chlorophyll a/b-binding protei... 494 e-139
UniRef100_Q40961 Light-harvesting chlorophyll a/b-binding protei... 493 e-138
UniRef100_Q9XQB3 LHCII type I chlorophyll a/b binding protein [P... 493 e-138
UniRef100_O64450 Light harvesting chlorophyll a/b-binding protei... 493 e-138
UniRef100_O64446 Light harvesting chlorophyll a/b-binding protei... 493 e-138
UniRef100_P27491 Chlorophyll a-b binding protein 7, chloroplast ... 493 e-138
UniRef100_P07369 Chlorophyll a-b binding protein 3C, chloroplast... 492 e-138
>UniRef100_Q9ZP08 Chlorophyll a/b binding protein precursor [Cicer arietinum]
Length = 266
Score = 518 bits (1333), Expect = e-146
Identities = 252/266 (94%), Positives = 261/266 (97%), Gaps = 2/266 (0%)
Query: 1 MAASTMALSSPSLAGQALNLSPSSQEVG--RFSMRKAATTKKVVSSGSPWYGPDRVKYLG 58
MAAS+MALSSP+LAG+ + LSPSSQE+G RF+MRK+ATTKKV SSGSPWYGPDRVKYLG
Sbjct: 1 MAASSMALSSPTLAGKPVKLSPSSQELGASRFTMRKSATTKKVASSGSPWYGPDRVKYLG 60
Query: 59 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLA 118
PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL+
Sbjct: 61 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 120
Query: 119 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGG 178
RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQV+LMGAVEGYRIAGG
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVVLMGAVEGYRIAGG 180
Query: 179 PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 238
PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 181 PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 240
Query: 239 ENLADHLSDPVNNNAWAYATNFVPGK 264
ENLADHLSDPVNNNAWAYATNFVPGK
Sbjct: 241 ENLADHLSDPVNNNAWAYATNFVPGK 266
>UniRef100_O81391 Chlorophyll a/b binding protein [Medicago sativa]
Length = 266
Score = 514 bits (1323), Expect = e-144
Identities = 250/266 (93%), Positives = 260/266 (96%), Gaps = 2/266 (0%)
Query: 1 MAASTMALSSPSLAGQALNLSPSSQEVG--RFSMRKAATTKKVVSSGSPWYGPDRVKYLG 58
MAAS+MALSSP+LAG+ + L+PSSQE+G RF+MRK+ATTKKV SSGSPWYGPDRVKYLG
Sbjct: 1 MAASSMALSSPTLAGKPVKLTPSSQELGAARFTMRKSATTKKVASSGSPWYGPDRVKYLG 60
Query: 59 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLA 118
PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL+
Sbjct: 61 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 120
Query: 119 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGG 178
RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGG
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGG 180
Query: 179 PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 238
PLGEV DPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 181 PLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 240
Query: 239 ENLADHLSDPVNNNAWAYATNFVPGK 264
ENLADHL+DPVNNNAWAYATNFVPGK
Sbjct: 241 ENLADHLADPVNNNAWAYATNFVPGK 266
>UniRef100_Q6T705 Chlorophyll a/b binding protein [Trifolium pratense]
Length = 266
Score = 509 bits (1312), Expect = e-143
Identities = 247/266 (92%), Positives = 259/266 (96%), Gaps = 2/266 (0%)
Query: 1 MAASTMALSSPSLAGQALNLSPSSQEVG--RFSMRKAATTKKVVSSGSPWYGPDRVKYLG 58
MAAS+MAL+SP+LAG+ + L+PSSQE+G +F+MRK ATTKKV SSGSPWYGPDRVKYLG
Sbjct: 1 MAASSMALTSPALAGKPVKLTPSSQELGVAKFTMRKGATTKKVASSGSPWYGPDRVKYLG 60
Query: 59 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLA 118
PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL+
Sbjct: 61 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 120
Query: 119 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGG 178
RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGG
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGG 180
Query: 179 PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 238
PLGEV DPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 181 PLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 240
Query: 239 ENLADHLSDPVNNNAWAYATNFVPGK 264
ENLADHL+DPVNNNAWA+ATNFVPGK
Sbjct: 241 ENLADHLADPVNNNAWAFATNFVPGK 266
>UniRef100_P07371 Chlorophyll a-b binding protein AB80, chloroplast precursor [Pisum
sativum]
Length = 269
Score = 505 bits (1301), Expect = e-142
Identities = 245/265 (92%), Positives = 258/265 (96%), Gaps = 2/265 (0%)
Query: 2 AASTMALSSPSLAGQALNLSPSSQEVG--RFSMRKAATTKKVVSSGSPWYGPDRVKYLGP 59
++S+MALSSP+LAG+ L L+PSSQE+G RF+MRK+ATTKKV SSGSPWYGPDRVKYLGP
Sbjct: 5 SSSSMALSSPTLAGKQLKLNPSSQELGAARFTMRKSATTKKVASSGSPWYGPDRVKYLGP 64
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAR 119
FSGE PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHSRWAMLGALGCVFPELL+R
Sbjct: 65 FSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSR 124
Query: 120 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGP 179
NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGP
Sbjct: 125 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGP 184
Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 239
LGEV DPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 185 LGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 244
Query: 240 NLADHLSDPVNNNAWAYATNFVPGK 264
NLADHL+DPVNNNAW+YATNFVPGK
Sbjct: 245 NLADHLADPVNNNAWSYATNFVPGK 269
>UniRef100_Q43437 Photosystem II type I chlorophyll a/b-binding protein precursor
[Glycine max]
Length = 264
Score = 503 bits (1296), Expect = e-141
Identities = 248/266 (93%), Positives = 256/266 (96%), Gaps = 4/266 (1%)
Query: 1 MAASTMALSSPSLAGQALNLSPSSQE--VGRFSMRKAATTKKVVSSGSPWYGPDRVKYLG 58
MAASTMALSS SLAGQA+ L+PS+ E VGR SMRK A+ K VSSGSPWYGPDRVKYLG
Sbjct: 1 MAASTMALSSSSLAGQAIKLAPSTPELGVGRVSMRKTAS--KTVSSGSPWYGPDRVKYLG 58
Query: 59 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLA 118
PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL+
Sbjct: 59 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 118
Query: 119 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGG 178
RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWATQVILMGAVEGYRIAGG
Sbjct: 119 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGG 178
Query: 179 PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 238
PLGEVTDP+YPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 179 PLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 238
Query: 239 ENLADHLSDPVNNNAWAYATNFVPGK 264
ENLADHL+DPVNNNAWAYATNFVPGK
Sbjct: 239 ENLADHLADPVNNNAWAYATNFVPGK 264
>UniRef100_Q9LKI0 LHCII type I chlorophyll a/b-binding protein [Phaseolus aureus]
Length = 264
Score = 503 bits (1295), Expect = e-141
Identities = 248/266 (93%), Positives = 257/266 (96%), Gaps = 4/266 (1%)
Query: 1 MAASTMALSSPSLAGQALNLSPSSQEV--GRFSMRKAATTKKVVSSGSPWYGPDRVKYLG 58
MAASTMALSSPSLAGQA+ LSPS+ E+ GR SMRKAA+ K VSSGSPWYGPDRVKYLG
Sbjct: 1 MAASTMALSSPSLAGQAIKLSPSTPELSGGRISMRKAAS--KSVSSGSPWYGPDRVKYLG 58
Query: 59 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLA 118
PFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELLA
Sbjct: 59 PFSGEAPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 118
Query: 119 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGG 178
RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWATQVILMGAVEGYRIAGG
Sbjct: 119 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGG 178
Query: 179 PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 238
PLGEVTDP+YPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFS+FGFFVQAIVTGKGPL
Sbjct: 179 PLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSIFGFFVQAIVTGKGPL 238
Query: 239 ENLADHLSDPVNNNAWAYATNFVPGK 264
ENLADHL+DPVNNNAWAYATNFVPGK
Sbjct: 239 ENLADHLADPVNNNAWAYATNFVPGK 264
>UniRef100_P27490 Chlorophyll a-b binding protein 8, chloroplast precursor [Pisum
sativum]
Length = 268
Score = 502 bits (1293), Expect = e-141
Identities = 247/268 (92%), Positives = 257/268 (95%), Gaps = 4/268 (1%)
Query: 1 MAASTMALSSPSLAGQALNLS--PSSQEVG--RFSMRKAATTKKVVSSGSPWYGPDRVKY 56
MAAS+MALSSP+L G+ + S PSSQE+G RF+MRK+ATTKKV SSGSPWYGPDRVKY
Sbjct: 1 MAASSMALSSPTLTGKPVETSANPSSQELGGARFTMRKSATTKKVASSGSPWYGPDRVKY 60
Query: 57 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 116
LGPFSGE PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHSRWAMLGALGCVFPEL
Sbjct: 61 LGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPEL 120
Query: 117 LARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIA 176
L+RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIA
Sbjct: 121 LSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIA 180
Query: 177 GGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 236
GGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 181 GGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240
Query: 237 PLENLADHLSDPVNNNAWAYATNFVPGK 264
PLENLADHLSDPVNNNAW+YATNFVPGK
Sbjct: 241 PLENLADHLSDPVNNNAWSYATNFVPGK 268
>UniRef100_P09756 Chlorophyll a-b binding protein 3, chloroplast precursor [Glycine
max]
Length = 263
Score = 502 bits (1293), Expect = e-141
Identities = 245/263 (93%), Positives = 253/263 (96%), Gaps = 2/263 (0%)
Query: 2 AASTMALSSPSLAGQALNLSPSSQEVGRFSMRKAATTKKVVSSGSPWYGPDRVKYLGPFS 61
AAS+MALSSPSLAG+A+ L PS+ EVGR SMRK T K VSSGSPWYGPDRVKYLGPFS
Sbjct: 3 AASSMALSSPSLAGKAVKLGPSAPEVGRVSMRKTVT--KQVSSGSPWYGPDRVKYLGPFS 60
Query: 62 GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNG 121
GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL+RNG
Sbjct: 61 GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNG 120
Query: 122 VKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLG 181
VKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWATQVILMGAVEGYRIAGGPLG
Sbjct: 121 VKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLG 180
Query: 182 EVTDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENL 241
EVTDP+YPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENL
Sbjct: 181 EVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENL 240
Query: 242 ADHLSDPVNNNAWAYATNFVPGK 264
ADHL+ PVNNNAWAYATNFVPGK
Sbjct: 241 ADHLAGPVNNNAWAYATNFVPGK 263
>UniRef100_O48657 Chlorophyll a/b-binding protein precursor [Fagus crenata]
Length = 264
Score = 500 bits (1288), Expect = e-140
Identities = 246/266 (92%), Positives = 256/266 (95%), Gaps = 4/266 (1%)
Query: 1 MAASTMALSSPSLAGQALNLSPSSQE--VGRFSMRKAATTKKVVSSGSPWYGPDRVKYLG 58
MAASTMALSSPSLAG+A+ L+PS+ E VGR SMRK+A+ VSSGSPWYGPDRVKYLG
Sbjct: 1 MAASTMALSSPSLAGKAVKLAPSTPELNVGRVSMRKSASRN--VSSGSPWYGPDRVKYLG 58
Query: 59 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLA 118
PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLA
Sbjct: 59 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLA 118
Query: 119 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGG 178
RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWATQVILMGAVEGYRIAGG
Sbjct: 119 RNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGG 178
Query: 179 PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 238
PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+
Sbjct: 179 PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPI 238
Query: 239 ENLADHLSDPVNNNAWAYATNFVPGK 264
ENLADHL+DPV NNAWAYATNFVPGK
Sbjct: 239 ENLADHLADPVTNNAWAYATNFVPGK 264
>UniRef100_Q39831 Chlorophyll a/b-binding protein [Glycine max]
Length = 263
Score = 500 bits (1287), Expect = e-140
Identities = 244/263 (92%), Positives = 252/263 (95%), Gaps = 2/263 (0%)
Query: 2 AASTMALSSPSLAGQALNLSPSSQEVGRFSMRKAATTKKVVSSGSPWYGPDRVKYLGPFS 61
AAS+MALSSPSLAG+A+ L PS+ EVGR SMRK T K SSGSPWYGPDRVKYLGPFS
Sbjct: 3 AASSMALSSPSLAGKAVKLGPSAPEVGRVSMRKTVT--KQASSGSPWYGPDRVKYLGPFS 60
Query: 62 GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNG 121
GEPPSYLTGEFPGDYGWDTAGLSADPETFA+N ELEVIHSRWAMLGALGCVFPELL+RNG
Sbjct: 61 GEPPSYLTGEFPGDYGWDTAGLSADPETFARNPELEVIHSRWAMLGALGCVFPELLSRNG 120
Query: 122 VKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLG 181
VKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLG
Sbjct: 121 VKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLG 180
Query: 182 EVTDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENL 241
EVTDP+YPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENL
Sbjct: 181 EVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENL 240
Query: 242 ADHLSDPVNNNAWAYATNFVPGK 264
ADHL+DPVNNNAWAYATNFVPGK
Sbjct: 241 ADHLADPVNNNAWAYATNFVPGK 263
>UniRef100_P27495 Chlorophyll a-b binding protein 40, chloroplast precursor
[Nicotiana tabacum]
Length = 267
Score = 497 bits (1279), Expect = e-139
Identities = 241/267 (90%), Positives = 252/267 (94%), Gaps = 3/267 (1%)
Query: 1 MAASTMALSSPSLAGQALNLSPSSQEV---GRFSMRKAATTKKVVSSGSPWYGPDRVKYL 57
MAASTMALSSPS AG+A+ LSPSS E+ G+ +MRK A+ K VSSGSPWYGPDRVKYL
Sbjct: 1 MAASTMALSSPSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYL 60
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 117
GPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL
Sbjct: 61 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120
Query: 118 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAG 177
ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 180
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
Query: 238 LENLADHLSDPVNNNAWAYATNFVPGK 264
LENLADHL+DPVNNNAWAYATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWAYATNFVPGK 267
>UniRef100_Q9LKH9 LHCII type I chlorophyll a/b-binding protein [Phaseolus aureus]
Length = 264
Score = 496 bits (1278), Expect = e-139
Identities = 245/266 (92%), Positives = 255/266 (95%), Gaps = 4/266 (1%)
Query: 1 MAASTMALSSPSLAGQALNLSPSSQEV--GRFSMRKAATTKKVVSSGSPWYGPDRVKYLG 58
MAASTMALSSPSLAGQA+ LSPS+ ++ GR SMRK A+ K VSSGSPWYGPDRVKYLG
Sbjct: 1 MAASTMALSSPSLAGQAIKLSPSTPDLSGGRISMRKTAS--KSVSSGSPWYGPDRVKYLG 58
Query: 59 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLA 118
PFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALG VFPELLA
Sbjct: 59 PFSGEAPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGSVFPELLA 118
Query: 119 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGG 178
RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA+QVILMGAVEGYRIAGG
Sbjct: 119 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVILMGAVEGYRIAGG 178
Query: 179 PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 238
PLGEVTDP+YPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 179 PLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 238
Query: 239 ENLADHLSDPVNNNAWAYATNFVPGK 264
ENLADHL+DPVNNNAWAYATNFVPGK
Sbjct: 239 ENLADHLADPVNNNAWAYATNFVPGK 264
>UniRef100_Q9M600 Chlorophyll a/b binding protein precursor [Euphorbia esula]
Length = 268
Score = 494 bits (1273), Expect = e-139
Identities = 244/267 (91%), Positives = 251/267 (93%), Gaps = 5/267 (1%)
Query: 2 AASTMALSSPSLAGQALNLSPSSQEV----GRFSMRKAATTKKVVSSGSPWYGPDRVKYL 57
A+S+MALSSPS AGQA+ LSPSS GR SMRKAAT KKV SGSPWYGPDRVKYL
Sbjct: 3 ASSSMALSSPSFAGQAVKLSPSSASELMGNGRVSMRKAAT-KKVAPSGSPWYGPDRVKYL 61
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 117
GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL
Sbjct: 62 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 121
Query: 118 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAG 177
ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYRIAG
Sbjct: 122 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 181
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGEV DP+YPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 182 GPLGEVVDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 241
Query: 238 LENLADHLSDPVNNNAWAYATNFVPGK 264
LENLADHL DPVNNNAWA+ATNFVPGK
Sbjct: 242 LENLADHLFDPVNNNAWAFATNFVPGK 268
>UniRef100_O64449 Light harvesting chlorophyll a/b-binding protein precursor
[Nicotiana sylvestris]
Length = 267
Score = 494 bits (1272), Expect = e-139
Identities = 240/267 (89%), Positives = 248/267 (91%), Gaps = 3/267 (1%)
Query: 1 MAASTMALSSPSLAGQALNLSPSSQEV---GRFSMRKAATTKKVVSSGSPWYGPDRVKYL 57
M ASTMALSSPS AG A+ LSPSS E+ G+ MRK T K VSSGSPWYGPDRVKYL
Sbjct: 1 MTASTMALSSPSFAGNAVKLSPSSSEITGNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYL 60
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 117
GPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL
Sbjct: 61 GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120
Query: 118 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAG 177
ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA QV+LMGA+EGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAIEGYRVAG 180
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
Query: 238 LENLADHLSDPVNNNAWAYATNFVPGK 264
LENL DHL+DPVNNNAWAYATNFVPGK
Sbjct: 241 LENLVDHLADPVNNNAWAYATNFVPGK 267
>UniRef100_Q40961 Light-harvesting chlorophyll a/b-binding protein precursor [Prunus
persica]
Length = 267
Score = 493 bits (1270), Expect = e-138
Identities = 239/267 (89%), Positives = 252/267 (93%), Gaps = 3/267 (1%)
Query: 1 MAASTMALSSPSLAGQALNLSPSSQEV---GRFSMRKAATTKKVVSSGSPWYGPDRVKYL 57
MA+STMALSSPSLAGQA+ L S + GR +MRK A+ K VSSGSPWYGPDRVKYL
Sbjct: 1 MASSTMALSSPSLAGQAVKLGSSVSNIVGEGRITMRKTASKSKNVSSGSPWYGPDRVKYL 60
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 117
GPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL
Sbjct: 61 GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 120
Query: 118 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAG 177
+RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR+AG
Sbjct: 121 SRNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG 180
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGE+TDPLYPGGSFDPLGLA+DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEITDPLYPGGSFDPLGLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
Query: 238 LENLADHLSDPVNNNAWAYATNFVPGK 264
+ENLADHL+DPVNNNAW+YATNFVPGK
Sbjct: 241 IENLADHLADPVNNNAWSYATNFVPGK 267
>UniRef100_Q9XQB3 LHCII type I chlorophyll a/b binding protein [Phaseolus aureus]
Length = 263
Score = 493 bits (1269), Expect = e-138
Identities = 241/263 (91%), Positives = 251/263 (94%), Gaps = 2/263 (0%)
Query: 2 AASTMALSSPSLAGQALNLSPSSQEVGRFSMRKAATTKKVVSSGSPWYGPDRVKYLGPFS 61
AAS+MALSSPS AG+A+ L+PS+ EVGR SMRK T K VSSGSPWYGPDRVKYLGPFS
Sbjct: 3 AASSMALSSPSFAGKAVKLAPSAPEVGRASMRKTVT--KQVSSGSPWYGPDRVKYLGPFS 60
Query: 62 GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNG 121
GEPPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALG VFPE L+RNG
Sbjct: 61 GEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGIVFPEPLSRNG 120
Query: 122 VKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLG 181
VKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWATQVILMGAVEGYRIAGGPLG
Sbjct: 121 VKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLG 180
Query: 182 EVTDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENL 241
EVTDP YPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFS+FGFFVQAIVTGKGPLENL
Sbjct: 181 EVTDPTYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSVFGFFVQAIVTGKGPLENL 240
Query: 242 ADHLSDPVNNNAWAYATNFVPGK 264
ADHL+DPVNNNAWAYATNFVPGK
Sbjct: 241 ADHLADPVNNNAWAYATNFVPGK 263
>UniRef100_O64450 Light harvesting chlorophyll a/b-binding protein precursor
[Nicotiana sylvestris]
Length = 267
Score = 493 bits (1269), Expect = e-138
Identities = 240/267 (89%), Positives = 250/267 (92%), Gaps = 3/267 (1%)
Query: 1 MAASTMALSSPSLAGQALNLSPSSQEV---GRFSMRKAATTKKVVSSGSPWYGPDRVKYL 57
MAASTMALSS S G+A+ LSPSS E+ G+ +MRK AT K VSSGSPWYGPDRVKYL
Sbjct: 1 MAASTMALSSSSFVGKAVKLSPSSSEITGNGKVTMRKTATKAKPVSSGSPWYGPDRVKYL 60
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 117
GPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL
Sbjct: 61 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120
Query: 118 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAG 177
ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 180
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
Query: 238 LENLADHLSDPVNNNAWAYATNFVPGK 264
LENLADHL+DPVNNNAWAYATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWAYATNFVPGK 267
>UniRef100_O64446 Light harvesting chlorophyll a/b-binding protein precursor
[Nicotiana sylvestris]
Length = 267
Score = 493 bits (1269), Expect = e-138
Identities = 240/267 (89%), Positives = 251/267 (93%), Gaps = 3/267 (1%)
Query: 1 MAASTMALSSPSLAGQALNLSPSSQEV---GRFSMRKAATTKKVVSSGSPWYGPDRVKYL 57
MAASTMALSS S AG+A+ LSPSS E+ G+ +MRK A+ K VSSGSPWYGPDRVKYL
Sbjct: 1 MAASTMALSSSSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYL 60
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 117
GPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL
Sbjct: 61 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120
Query: 118 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAG 177
ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 180
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
Query: 238 LENLADHLSDPVNNNAWAYATNFVPGK 264
LENLADHL+DPVNNNAWAYATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWAYATNFVPGK 267
>UniRef100_P27491 Chlorophyll a-b binding protein 7, chloroplast precursor [Nicotiana
tabacum]
Length = 267
Score = 493 bits (1269), Expect = e-138
Identities = 239/267 (89%), Positives = 248/267 (92%), Gaps = 3/267 (1%)
Query: 1 MAASTMALSSPSLAGQALNLSPSSQEV---GRFSMRKAATTKKVVSSGSPWYGPDRVKYL 57
M ASTMALSSPS AG A+ LSPSS E+ G+ MRK T K VSSGSPWYGPDRVKYL
Sbjct: 1 MTASTMALSSPSFAGNAVKLSPSSSEITGNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYL 60
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 117
GPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL
Sbjct: 61 GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120
Query: 118 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAG 177
ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA QV+LMGA+EGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAIEGYRVAG 180
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
Query: 238 LENLADHLSDPVNNNAWAYATNFVPGK 264
L+NL DHL+DPVNNNAWAYATNFVPGK
Sbjct: 241 LDNLVDHLADPVNNNAWAYATNFVPGK 267
>UniRef100_P07369 Chlorophyll a-b binding protein 3C, chloroplast precursor
[Lycopersicon esculentum]
Length = 267
Score = 492 bits (1266), Expect = e-138
Identities = 240/267 (89%), Positives = 249/267 (92%), Gaps = 3/267 (1%)
Query: 1 MAASTMALSSPSLAGQALNLSPSSQEV---GRFSMRKAATTKKVVSSGSPWYGPDRVKYL 57
MA STMALSS + AG+A+ LSPSS E+ GR +MRK AT K SSGSPWYGPDRVKYL
Sbjct: 1 MATSTMALSSSTFAGKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYL 60
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 117
GPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL
Sbjct: 61 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120
Query: 118 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAG 177
ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYRIAG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 180
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
Query: 238 LENLADHLSDPVNNNAWAYATNFVPGK 264
LENLADHL+DPVNNNAWA+ATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWAFATNFVPGK 267
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.317 0.136 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 486,984,544
Number of Sequences: 2790947
Number of extensions: 21535992
Number of successful extensions: 44080
Number of sequences better than 10.0: 488
Number of HSP's better than 10.0 without gapping: 404
Number of HSP's successfully gapped in prelim test: 84
Number of HSP's that attempted gapping in prelim test: 42509
Number of HSP's gapped (non-prelim): 669
length of query: 264
length of database: 848,049,833
effective HSP length: 125
effective length of query: 139
effective length of database: 499,181,458
effective search space: 69386222662
effective search space used: 69386222662
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 73 (32.7 bits)
Lotus: description of TM0007.11