BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0588b.6
         (142 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

RESA_BACSU (P35160) Thiol-disulfide oxidoreductase resA                30  2.2
NOGG_XENLA (P49011) Noggin precursor                                   30  2.2
RL10_CHLTE (Q8KG17) 50S ribosomal protein L10                          29  3.8
UMP1_SCHPO (O74416) Putative proteasome maturation factor ump1         28  5.0
SYA_RHOBA (Q7UFH9) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine-...    28  6.5
AX2A_PHAAU (P32293) Auxin-induced protein 22A (Indole-3-acetic a...    28  6.5
RBS1_MOUSE (Q91W59) RNA binding motif, single-stranded interacti...    28  8.5

>RESA_BACSU (P35160) Thiol-disulfide oxidoreductase resA
          Length = 179

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 17/63 (26%), Positives = 32/63 (49%), Gaps = 8/63 (12%)

Query: 60  YGAAFPLKMDLDRQILSRFQRPSGAIPSSML------GLEAFTGSLDDFGFEDYLSDPRE 113
           YG  FP+ +D DRQ+L  +      +P++ L       ++  TG++ +    DY++  + 
Sbjct: 117 YGVNFPVVLDTDRQVLDAYD--VSPLPTTFLINPEGKVVKVVTGTMTESMIHDYMNLIKP 174

Query: 114 SET 116
            ET
Sbjct: 175 GET 177


>NOGG_XENLA (P49011) Noggin precursor
          Length = 222

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 9/72 (12%)

Query: 35  HPLQSAQESASKINEVMKRQCMVNLYGAAFPLKM---------DLDRQILSRFQRPSGAI 85
           HP          +NE + R  MV  +   F   +         DL    L   Q+PSGA+
Sbjct: 48  HPDPIYDPKEKDLNETLLRTLMVGHFDPNFMATILPEERLGVEDLGELDLLLRQKPSGAM 107

Query: 86  PSSMLGLEAFTG 97
           P+ + GLE + G
Sbjct: 108 PAEIKGLEFYEG 119


>RL10_CHLTE (Q8KG17) 50S ribosomal protein L10
          Length = 173

 Score = 28.9 bits (63), Expect = 3.8
 Identities = 14/53 (26%), Positives = 26/53 (48%)

Query: 17  NDALRFGLQGVKSDIVGSHPLQSAQESASKINEVMKRQCMVNLYGAAFPLKMD 69
           N+AL+F +  +   + GS  L    E  SK   + +   ++N   A+ P+ M+
Sbjct: 103 NEALKFKMASIDGQVFGSDSLPQLSEMLSKTENIGRLAGLLNNMVASVPMVMN 155


>UMP1_SCHPO (O74416) Putative proteasome maturation factor ump1
          Length = 129

 Score = 28.5 bits (62), Expect = 5.0
 Identities = 11/51 (21%), Positives = 28/51 (54%)

Query: 31 IVGSHPLQSAQESASKINEVMKRQCMVNLYGAAFPLKMDLDRQILSRFQRP 81
          +   HPL+S  ++     + ++   M  +YG   P++ ++++++ S+  RP
Sbjct: 32 VENKHPLESRLKNWEAQQQQIRLDSMRRIYGLHEPVRREMEQKLASQSSRP 82


>SYA_RHOBA (Q7UFH9) Alanyl-tRNA synthetase (EC 6.1.1.7)
           (Alanine--tRNA ligase) (AlaRS)
          Length = 945

 Score = 28.1 bits (61), Expect = 6.5
 Identities = 23/80 (28%), Positives = 34/80 (41%), Gaps = 17/80 (21%)

Query: 71  DRQILSRFQRPSGAIPSSMLGLEAFTG------------SLDDFGFEDYLSDPRESETIR 118
           D Q+LS   RP  A+   +L    F G            S D+F FE  +   R +  I 
Sbjct: 474 DGQLLSHLDRPEDAVLRLVLDHSPFYGESGGQVGDIGVISNDNFEFE-VIDTQRHASMI- 531

Query: 119 PLDMHHGMEVRLGLSKGPVC 138
              +HHG  +R  +++G  C
Sbjct: 532 ---VHHGRLIRGKINEGETC 548


>AX2A_PHAAU (P32293) Auxin-induced protein 22A (Indole-3-acetic acid
           induced protein ARG3)
          Length = 194

 Score = 28.1 bits (61), Expect = 6.5
 Identities = 17/43 (39%), Positives = 25/43 (57%), Gaps = 1/43 (2%)

Query: 28  KSDIVGSHPLQSAQESASKINEVMKRQCMVNLYGAAFPLKMDL 70
           K+ +VG  P+ S ++  S +NE  K    V++ GA F  KMDL
Sbjct: 62  KNQVVGWPPVCSYRKKNS-VNEASKMYVKVSMDGAPFLRKMDL 103


>RBS1_MOUSE (Q91W59) RNA binding motif, single-stranded interacting
           protein 1 (Single-stranded DNA-binding protein MSSP-1)
          Length = 403

 Score = 27.7 bits (60), Expect = 8.5
 Identities = 25/101 (24%), Positives = 39/101 (37%), Gaps = 10/101 (9%)

Query: 28  KSDIVGSHPL--------QSAQESASKINEVMKRQCMVNLYGAAFPLKMDLDRQILSRFQ 79
           K  +V +HP+         S   S+S  N    +    NLY    P   +   Q L +  
Sbjct: 25  KQSLVPAHPMAPPSPSTTSSNNNSSSSSNSGWDQLSKTNLYIRGLP--PNTTDQDLVKLC 82

Query: 80  RPSGAIPSSMLGLEAFTGSLDDFGFEDYLSDPRESETIRPL 120
           +P G I S+   L+  T     +GF D+ S     + +  L
Sbjct: 83  QPYGKIVSTKAILDKATNKCKGYGFVDFDSPAAAQKAVSAL 123


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.319    0.136    0.391 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,516,962
Number of Sequences: 164201
Number of extensions: 577226
Number of successful extensions: 1256
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1254
Number of HSP's gapped (non-prelim): 7
length of query: 142
length of database: 59,974,054
effective HSP length: 99
effective length of query: 43
effective length of database: 43,718,155
effective search space: 1879880665
effective search space used: 1879880665
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)