BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0587.1
(134 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
YLW6_CAEEL (P34409) Hypothetical protein F22B7.6 in chromosome III 95 3e-20
DP42_RHIME (Q92XH8) DNA polymerase IV 2 (EC 2.7.7.7) (Pol IV 2) 85 3e-17
DPO4_THETN (P58965) DNA polymerase IV (EC 2.7.7.7) (Pol IV) 79 2e-15
DP42_AGRT5 (Q8UJK7) DNA polymerase IV 2 (EC 2.7.7.7) (Pol IV 2) 79 2e-15
DPO4_XANCP (Q8PCW8) DNA polymerase IV (EC 2.7.7.7) (Pol IV) 78 4e-15
DPO4_XANAC (Q8PGJ4) DNA polymerase IV (EC 2.7.7.7) (Pol IV) 75 2e-14
DP43_RHILO (Q98NW7) DNA polymerase IV 3 (EC 2.7.7.7) (Pol IV 3) 75 2e-14
DPO4_VIBVU (Q8DBI7) DNA polymerase IV (EC 2.7.7.7) (Pol IV) 75 2e-14
DPO4_STAAW (P58964) DNA polymerase IV (EC 2.7.7.7) (Pol IV) 74 4e-14
DPO4_STAAN (P63992) DNA polymerase IV (EC 2.7.7.7) (Pol IV) 74 4e-14
DPO4_STAAM (P63991) DNA polymerase IV (EC 2.7.7.7) (Pol IV) 74 4e-14
DP41_BACHD (Q9KCU7) DNA polymerase IV 1 (EC 2.7.7.7) (Pol IV 1) 73 1e-13
DPO4_VIBCH (Q9KPS5) DNA polymerase IV (EC 2.7.7.7) (Pol IV) 72 2e-13
DPO4_RALSO (Q8XZ19) DNA polymerase IV (EC 2.7.7.7) (Pol IV) 72 2e-13
DPO4_CLOPE (Q8XK37) DNA polymerase IV (EC 2.7.7.7) (Pol IV) 72 3e-13
DPO4_VIBPA (Q87MB4) DNA polymerase IV (EC 2.7.7.7) (Pol IV) 71 5e-13
DPO4_PASMU (Q9CNG4) DNA polymerase IV (EC 2.7.7.7) (Pol IV) 71 5e-13
DPO4_LISMO (Q8Y5T0) DNA polymerase IV (EC 2.7.7.7) (Pol IV) 70 1e-12
DPO4_LISIN (Q92A40) DNA polymerase IV (EC 2.7.7.7) (Pol IV) 70 1e-12
DPO4_STRPN (Q97SC7) DNA polymerase IV (EC 2.7.7.7) (Pol IV) 69 2e-12
>YLW6_CAEEL (P34409) Hypothetical protein F22B7.6 in chromosome III
Length = 518
Score = 94.7 bits (234), Expect = 3e-20
Identities = 50/119 (42%), Positives = 75/119 (63%), Gaps = 3/119 (2%)
Query: 11 LELEASRDLSSFWLLAEMDVFYAAVETLSNPTFNGKAMAVGSMSMISTSSHKARKFGVRS 70
++LE+SRDLS + +MD ++AAVE NP MAVGS +M+STS++ AR+FGVR+
Sbjct: 73 MKLESSRDLSRDCVCIDMDAYFAAVEMRDNPALRTVPMAVGSSAMLSTSNYLARRFGVRA 132
Query: 71 AIPKFIAHK*CPELIFVPRDFKKHM*ISRSIYLLLSVLQRYDPNFIAGSLDGAYLDKTE 129
+P FI++K CP L VP ++ K+ +SR + YD + SLD A++D T+
Sbjct: 133 GMPGFISNKLCPSLTIVPGNYPKYTKVSRQ---FSQIFMEYDSDVGMMSLDEAFIDLTD 188
>DP42_RHIME (Q92XH8) DNA polymerase IV 2 (EC 2.7.7.7) (Pol IV 2)
Length = 354
Score = 84.7 bits (208), Expect = 3e-17
Identities = 48/106 (45%), Positives = 64/106 (60%), Gaps = 6/106 (5%)
Query: 27 EMDVFYAAVETLSNPTFNGKAMAVG---SMSMISTSSHKARKFGVRSAIPKFIAHK*CPE 83
+MD FYA+VE NP GK +AVG + +++ +S++ARKFGV SA+P A + CPE
Sbjct: 8 DMDAFYASVEQRDNPELRGKPVAVGYPEARGVVAAASYEARKFGVHSAMPSVTAKRKCPE 67
Query: 84 LIFVPRDFKKHM*ISRSIYLLLSVLQRYDPNFIAGSLDGAYLDKTE 129
LIFVP F + +SR I ++ Y P SLD AYLD TE
Sbjct: 68 LIFVPHRFDVYRAVSRQIQ---AIFAEYTPLVEPLSLDEAYLDVTE 110
>DPO4_THETN (P58965) DNA polymerase IV (EC 2.7.7.7) (Pol IV)
Length = 384
Score = 78.6 bits (192), Expect = 2e-15
Identities = 45/111 (40%), Positives = 69/111 (61%), Gaps = 10/111 (9%)
Query: 27 EMDVFYAAVETLSNPTFNGKAMAVGSMS---MISTSSHKARKFGVRSAIPKFIAHK*CPE 83
+MD F+A++E NP + GK + VG +S ++ST S++ARK+G+ SA+P ++A K CP+
Sbjct: 9 DMDAFFASIEQQDNPEYRGKPVIVGGLSGRGVVSTCSYEARKYGIHSAMPMYMAKKLCPQ 68
Query: 84 LIFVPRDFKKHM*ISRSIYLLLSVLQRYD--PNFIAGSLDGAYLDKTEVCK 132
IF+P K++ +S I+ +L YD P S+D AYLD T V K
Sbjct: 69 GIFLPVRRKRYEEVSEQIFRIL-----YDITPFVEPVSIDEAYLDVTHVDK 114
>DP42_AGRT5 (Q8UJK7) DNA polymerase IV 2 (EC 2.7.7.7) (Pol IV 2)
Length = 357
Score = 78.6 bits (192), Expect = 2e-15
Identities = 46/109 (42%), Positives = 66/109 (60%), Gaps = 6/109 (5%)
Query: 27 EMDVFYAAVETLSNPTFNGKAMAVGSMS---MISTSSHKARKFGVRSAIPKFIAHK*CPE 83
+MD FYA+VE NP G+ +AVGS + +++ +S++AR+FGVRSA+P A + CP+
Sbjct: 8 DMDAFYASVEQRDNPELRGRPVAVGSAAARGVVAAASYEAREFGVRSAMPSVTAARRCPD 67
Query: 84 LIFVPRDFKKHM*ISRSIYLLLSVLQRYDPNFIAGSLDGAYLDKTEVCK 132
LIFVP F + +S+ I ++ Y SLD AYLD TE K
Sbjct: 68 LIFVPPRFDVYKAVSQQI---RAIFAEYTRLIEPLSLDEAYLDVTENLK 113
>DPO4_XANCP (Q8PCW8) DNA polymerase IV (EC 2.7.7.7) (Pol IV)
Length = 359
Score = 77.8 bits (190), Expect = 4e-15
Identities = 42/106 (39%), Positives = 64/106 (59%), Gaps = 6/106 (5%)
Query: 27 EMDVFYAAVETLSNPTFNGKAMAV---GSMSMISTSSHKARKFGVRSAIPKFIAHK*CPE 83
+MD FYA+VE +P+ GK + V G+ S++ +S++AR FG+RSA+P A + CP+
Sbjct: 8 DMDAFYASVEQRDDPSLRGKPVVVAWRGARSVVCAASYEARTFGIRSAMPAVRAERLCPD 67
Query: 84 LIFVPRDFKKHM*ISRSIYLLLSVLQRYDPNFIAGSLDGAYLDKTE 129
+FVP DF ++ +SR + + R+ SLD AYLD TE
Sbjct: 68 AVFVPPDFARYKAVSRQV---REIFHRHTDLVEPLSLDEAYLDVTE 110
>DPO4_XANAC (Q8PGJ4) DNA polymerase IV (EC 2.7.7.7) (Pol IV)
Length = 359
Score = 75.5 bits (184), Expect = 2e-14
Identities = 42/105 (40%), Positives = 63/105 (60%), Gaps = 6/105 (5%)
Query: 27 EMDVFYAAVETLSNPTFNGKAMAV---GSMSMISTSSHKARKFGVRSAIPKFIAHK*CPE 83
+MD FYA+VE +P+ GK + V G+ S++ +S++AR FG+RSA+P A + CP+
Sbjct: 8 DMDAFYASVEQRDDPSLRGKPVVVAWRGARSVVCAASYEARIFGIRSAMPAVRAERLCPD 67
Query: 84 LIFVPRDFKKHM*ISRSIYLLLSVLQRYDPNFIAGSLDGAYLDKT 128
IFVP DF ++ +SR + + R+ SLD AYLD T
Sbjct: 68 AIFVPPDFTRYKAVSRQV---REIFHRHTDLVEPLSLDEAYLDVT 109
>DP43_RHILO (Q98NW7) DNA polymerase IV 3 (EC 2.7.7.7) (Pol IV 3)
Length = 361
Score = 75.5 bits (184), Expect = 2e-14
Identities = 45/106 (42%), Positives = 61/106 (57%), Gaps = 6/106 (5%)
Query: 27 EMDVFYAAVETLSNPTFNGKAMAVGSMS---MISTSSHKARKFGVRSAIPKFIAHK*CPE 83
+MD FYA+VE NP GK +AVG + +++ +S++AR FGVRSA+P A + CPE
Sbjct: 16 DMDAFYASVEQRDNPELRGKPLAVGGAAARGVVAAASYEARAFGVRSAMPSVTAKRKCPE 75
Query: 84 LIFVPRDFKKHM*ISRSIYLLLSVLQRYDPNFIAGSLDGAYLDKTE 129
LIFVP F + +S I V + SLD AYLD T+
Sbjct: 76 LIFVPPRFDVYRAVSAQI---RDVFAEHTDLIEPLSLDEAYLDVTQ 118
>DPO4_VIBVU (Q8DBI7) DNA polymerase IV (EC 2.7.7.7) (Pol IV)
Length = 354
Score = 75.1 bits (183), Expect = 2e-14
Identities = 47/107 (43%), Positives = 61/107 (56%), Gaps = 7/107 (6%)
Query: 27 EMDVFYAAVETLSNPTFNGKAMAVGS----MSMISTSSHKARKFGVRSAIPKFIAHK*CP 82
+MD FYAAVE NP F + +AVG +IST +++ARKFGVRSA+P A K CP
Sbjct: 12 DMDCFYAAVEMRDNPNFRSRPLAVGGHEKQRGVISTCNYEARKFGVRSAMPTAQALKLCP 71
Query: 83 ELIFVPRDFKKHM*ISRSIYLLLSVLQRYDPNFIAGSLDGAYLDKTE 129
L+ VP + + +S I S+ RY SLD AYLD T+
Sbjct: 72 SLLVVPGRMQVYKEVSTHI---RSIFSRYTHLIEPLSLDEAYLDVTD 115
>DPO4_STAAW (P58964) DNA polymerase IV (EC 2.7.7.7) (Pol IV)
Length = 356
Score = 74.3 bits (181), Expect = 4e-14
Identities = 45/110 (40%), Positives = 62/110 (55%), Gaps = 7/110 (6%)
Query: 27 EMDVFYAAVETLSNPTFNGKAMAVG----SMSMISTSSHKARKFGVRSAIPKFIAHK*CP 82
+MD F+A VE NP GK + VG S ++ST+S++ARK+GV SA+P AHK CP
Sbjct: 10 DMDYFFAQVEMRDNPKLKGKPVIVGGKASSRGVVSTASYEARKYGVHSAMPMSQAHKLCP 69
Query: 83 ELIFVPRDFKKHM*ISRSIYLLLSVLQRYDPNFIAGSLDGAYLDKTEVCK 132
FV +F + S I +S+ + Y SLD AYLD TE+ +
Sbjct: 70 NGYFVTSNFGAYRETSAQI---MSIFRSYTDKVEPMSLDEAYLDITELVR 116
>DPO4_STAAN (P63992) DNA polymerase IV (EC 2.7.7.7) (Pol IV)
Length = 356
Score = 74.3 bits (181), Expect = 4e-14
Identities = 45/110 (40%), Positives = 62/110 (55%), Gaps = 7/110 (6%)
Query: 27 EMDVFYAAVETLSNPTFNGKAMAVG----SMSMISTSSHKARKFGVRSAIPKFIAHK*CP 82
+MD F+A VE NP GK + VG S ++ST+S++ARK+GV SA+P AHK CP
Sbjct: 10 DMDYFFAQVEMRDNPKLKGKPVIVGGKASSRGVVSTASYEARKYGVHSAMPMSQAHKLCP 69
Query: 83 ELIFVPRDFKKHM*ISRSIYLLLSVLQRYDPNFIAGSLDGAYLDKTEVCK 132
FV +F + S I +S+ + Y SLD AYLD TE+ +
Sbjct: 70 NGYFVTSNFGAYRETSAQI---MSIFRSYTDKVEPMSLDEAYLDITELVR 116
>DPO4_STAAM (P63991) DNA polymerase IV (EC 2.7.7.7) (Pol IV)
Length = 356
Score = 74.3 bits (181), Expect = 4e-14
Identities = 45/110 (40%), Positives = 62/110 (55%), Gaps = 7/110 (6%)
Query: 27 EMDVFYAAVETLSNPTFNGKAMAVG----SMSMISTSSHKARKFGVRSAIPKFIAHK*CP 82
+MD F+A VE NP GK + VG S ++ST+S++ARK+GV SA+P AHK CP
Sbjct: 10 DMDYFFAQVEMRDNPKLKGKPVIVGGKASSRGVVSTASYEARKYGVHSAMPMSQAHKLCP 69
Query: 83 ELIFVPRDFKKHM*ISRSIYLLLSVLQRYDPNFIAGSLDGAYLDKTEVCK 132
FV +F + S I +S+ + Y SLD AYLD TE+ +
Sbjct: 70 NGYFVTSNFGAYRETSAQI---MSIFRSYTDKVEPMSLDEAYLDITELVR 116
>DP41_BACHD (Q9KCU7) DNA polymerase IV 1 (EC 2.7.7.7) (Pol IV 1)
Length = 413
Score = 72.8 bits (177), Expect = 1e-13
Identities = 45/112 (40%), Positives = 69/112 (61%), Gaps = 8/112 (7%)
Query: 27 EMDVFYAAVETLSNPTFNGKAMAV-GSMS----MISTSSHKARKFGVRSAIPKFIAHK*C 81
+M+ FYA+VE +P+ GKA+AV GS+ ++ TSS++AR GVRS IP + A + C
Sbjct: 11 DMNSFYASVEMAYDPSLKGKAIAVAGSVKDRRGIVVTSSYEARAKGVRSPIPVWQALRKC 70
Query: 82 PELIFVPRDFKKHM*ISRSIYLLLSVLQRYDPNFIAGSLDGAYLDKTEVCKE 133
PELI +P +F ++ S+ I+ S+L+ Y P S+D Y+D T K+
Sbjct: 71 PELILIPPNFDRYRSASQKIF---SLLEEYTPLVEKVSIDEGYMDVTTTIKK 119
>DPO4_VIBCH (Q9KPS5) DNA polymerase IV (EC 2.7.7.7) (Pol IV)
Length = 360
Score = 72.4 bits (176), Expect = 2e-13
Identities = 46/107 (42%), Positives = 62/107 (56%), Gaps = 7/107 (6%)
Query: 27 EMDVFYAAVETLSNPTFNGKAMAVGS----MSMISTSSHKARKFGVRSAIPKFIAHK*CP 82
+MD F+AAVE NP + A+AVG +IST +++ARKFGVRSA+P A K CP
Sbjct: 12 DMDCFFAAVEMRDNPAYREIALAVGGHEKQRGVISTCNYQARKFGVRSAMPTAQALKLCP 71
Query: 83 ELIFVPRDFKKHM*ISRSIYLLLSVLQRYDPNFIAGSLDGAYLDKTE 129
+L VP + +S+ I ++ QRY SLD AYLD +E
Sbjct: 72 QLHVVPGRMSVYKSVSQQIQ---TIFQRYTSLIEPLSLDEAYLDVSE 115
>DPO4_RALSO (Q8XZ19) DNA polymerase IV (EC 2.7.7.7) (Pol IV)
Length = 357
Score = 72.4 bits (176), Expect = 2e-13
Identities = 41/107 (38%), Positives = 63/107 (58%), Gaps = 7/107 (6%)
Query: 27 EMDVFYAAVETLSNPTFNGKAMAVGSM----SMISTSSHKARKFGVRSAIPKFIAHK*CP 82
+ D FYAA+E +P G+ +AVG +++T +++ARKFG+ SA+P A K CP
Sbjct: 8 DCDCFYAAIEMRDDPRLVGRPLAVGGRPERRGVVATCNYEARKFGIHSAMPMAQAVKRCP 67
Query: 83 ELIFVPRDFKKHM*ISRSIYLLLSVLQRYDPNFIAGSLDGAYLDKTE 129
+L+ VP K+ ++R I+ ++ Q Y P SLD AYLD T+
Sbjct: 68 DLLIVPPAMDKYRQVARQIF---AIYQGYTPLVEPLSLDEAYLDVTD 111
>DPO4_CLOPE (Q8XK37) DNA polymerase IV (EC 2.7.7.7) (Pol IV)
Length = 359
Score = 71.6 bits (174), Expect = 3e-13
Identities = 39/112 (34%), Positives = 66/112 (58%), Gaps = 9/112 (8%)
Query: 27 EMDVFYAAVETLSNPTFNGKAMAVGS----MSMISTSSHKARKFGVRSAIPKFIAHK*CP 82
+MD FYA++E NP + GK + VG +++T S++ARK+G+ SA+P A+K CP
Sbjct: 11 DMDAFYASIEQRDNPKYKGKPLIVGGDPNRRGVVATCSYEARKYGIHSAMPSLTAYKLCP 70
Query: 83 ELIFVPRDFKKHM*ISRSIYLLLSVLQRYDPNFIAGSLDGAYLD--KTEVCK 132
+ IF+ + + +SR + +++L Y SLD A++D K++ CK
Sbjct: 71 KAIFIRPRMEVYKKVSRQV---MNILNEYSNIVEPLSLDEAFVDVSKSKRCK 119
>DPO4_VIBPA (Q87MB4) DNA polymerase IV (EC 2.7.7.7) (Pol IV)
Length = 354
Score = 70.9 bits (172), Expect = 5e-13
Identities = 45/107 (42%), Positives = 61/107 (56%), Gaps = 7/107 (6%)
Query: 27 EMDVFYAAVETLSNPTFNGKAMAVGS----MSMISTSSHKARKFGVRSAIPKFIAHK*CP 82
+MD FYAAVE NP + A+AVG +IST +++ARKFGVRSA+P A + CP
Sbjct: 12 DMDCFYAAVEMRDNPNYRDIALAVGGHEKQRGVISTCNYEARKFGVRSAMPTARALQLCP 71
Query: 83 ELIFVPRDFKKHM*ISRSIYLLLSVLQRYDPNFIAGSLDGAYLDKTE 129
L+ VP + +S I ++ +RY SLD AYLD T+
Sbjct: 72 HLLVVPGRMHIYKQVSLQI---RAIFERYTSLIEPLSLDEAYLDVTD 115
>DPO4_PASMU (Q9CNG4) DNA polymerase IV (EC 2.7.7.7) (Pol IV)
Length = 355
Score = 70.9 bits (172), Expect = 5e-13
Identities = 42/107 (39%), Positives = 63/107 (58%), Gaps = 7/107 (6%)
Query: 27 EMDVFYAAVETLSNPTFNGKAMAVGSMS----MISTSSHKARKFGVRSAIPKFIAHK*CP 82
+MD FYAA+E NPT GK +AVG + +++T +++ARKFG+ SA+ A K CP
Sbjct: 8 DMDCFYAAIEMRDNPTLIGKPIAVGGEAKHRGVLATCNYEARKFGLHSAMSTAQAFKLCP 67
Query: 83 ELIFVPRDFKKHM*ISRSIYLLLSVLQRYDPNFIAGSLDGAYLDKTE 129
LI +P + + +S+ I+ + +RY SLD AYLD T+
Sbjct: 68 NLILLPVNMPLYKQVSQQIH---QIFRRYTDVIEPLSLDEAYLDVTD 111
>DPO4_LISMO (Q8Y5T0) DNA polymerase IV (EC 2.7.7.7) (Pol IV)
Length = 356
Score = 69.7 bits (169), Expect = 1e-12
Identities = 42/107 (39%), Positives = 59/107 (54%), Gaps = 7/107 (6%)
Query: 27 EMDVFYAAVETLSNPTFNGKAMAVGS----MSMISTSSHKARKFGVRSAIPKFIAHK*CP 82
+MD FYA+VE +P F GK + +G +++T S++ARKFGV SA+P A K CP
Sbjct: 11 DMDAFYASVEQRDHPEFRGKPLIIGGDPNKRGVVATCSYEARKFGVHSAMPTRQAAKLCP 70
Query: 83 ELIFVPRDFKKHM*ISRSIYLLLSVLQRYDPNFIAGSLDGAYLDKTE 129
IF+ + ++ +S I + RY SLD AYLD TE
Sbjct: 71 NGIFIHGNMAHYVEVSNQI---REIFSRYTDIIEPLSLDEAYLDVTE 114
>DPO4_LISIN (Q92A40) DNA polymerase IV (EC 2.7.7.7) (Pol IV)
Length = 356
Score = 69.7 bits (169), Expect = 1e-12
Identities = 42/107 (39%), Positives = 59/107 (54%), Gaps = 7/107 (6%)
Query: 27 EMDVFYAAVETLSNPTFNGKAMAVGS----MSMISTSSHKARKFGVRSAIPKFIAHK*CP 82
+MD FYA+VE +P F GK + +G +++T S++ARKFGV SA+P A K CP
Sbjct: 11 DMDAFYASVEQRDHPEFRGKPLIIGGDPNKRGVVATCSYEARKFGVHSAMPTRQAAKLCP 70
Query: 83 ELIFVPRDFKKHM*ISRSIYLLLSVLQRYDPNFIAGSLDGAYLDKTE 129
IF+ + ++ +S I + RY SLD AYLD TE
Sbjct: 71 NGIFIHGNMAHYVEVSNQI---REIFSRYTDIIEPLSLDEAYLDVTE 114
>DPO4_STRPN (Q97SC7) DNA polymerase IV (EC 2.7.7.7) (Pol IV)
Length = 344
Score = 68.6 bits (166), Expect = 2e-12
Identities = 39/110 (35%), Positives = 62/110 (55%), Gaps = 10/110 (9%)
Query: 27 EMDVFYAAVETLSNPTFNGKAMAVGS-------MSMISTSSHKARKFGVRSAIPKFIAHK 79
+MD F+AAVE NP GK + +GS ++ST S++AR FGV SA+ A++
Sbjct: 9 DMDAFFAAVEIRDNPKLRGKPVIIGSDPRQTGGRGVVSTCSYEARAFGVHSAMSSKEAYE 68
Query: 80 *CPELIFVPRDFKKHM*ISRSIYLLLSVLQRYDPNFIAGSLDGAYLDKTE 129
CP+ +F+ +++K+ + I ++ +RY S+D AYLD TE
Sbjct: 69 RCPQAVFISGNYEKYKSVGLQI---RAIFKRYTDLIEPMSIDEAYLDVTE 115
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.333 0.142 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,362,130
Number of Sequences: 164201
Number of extensions: 421370
Number of successful extensions: 1361
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1196
Number of HSP's gapped (non-prelim): 73
length of query: 134
length of database: 59,974,054
effective HSP length: 110
effective length of query: 24
effective length of database: 41,911,944
effective search space: 1005886656
effective search space used: 1005886656
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.6 bits)
S2: 58 (26.9 bits)
Lotus: description of TM0587.1