BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0559.5
         (263 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TXLA_SYNY3 (P73920) Thiol:disulfide interchange protein txlA hom...   131  2e-30
TXLA_SYNP7 (P35088) Thiol:disulfide interchange protein txlA          121  2e-27
THI1_SYNP7 (P12243) Thioredoxin 1 (TRX-1) (Thioredoxin M)              62  1e-09
THIO_CHLAU (Q7M1B9) Thioredoxin (TRX)                                  59  9e-09
THI1_ANASP (P06544) Thioredoxin 1 (TRX-1) (Thioredoxin M)              59  1e-08
THIO_SYNY3 (P52231) Thioredoxin (TRX)                                  59  2e-08
THIO_RHOSH (P08058) Thioredoxin (TRX)                                  58  3e-08
THIM_CHLRE (P23400) Thioredoxin M-type, chloroplast precursor (T...    58  3e-08
PDI_CHICK (P09102) Protein disulfide-isomerase precursor (EC 5.3...    58  3e-08
THIO_RHORU (P10473) Thioredoxin (TRX)                                  57  3e-08
THIO_STRCO (P52230) Thioredoxin (TRX)                                  57  5e-08
THIO_ALIAC (P80579) Thioredoxin (TRX)                                  57  5e-08
THIM_PEA (P48384) Thioredoxin M-type, chloroplast precursor (TRX-M)    57  5e-08
THIM_BRANA (Q9XGS0) Thioredoxin M-type, chloroplast precursor (T...    57  6e-08
THIO_PSEAE (Q9X2T1) Thioredoxin (TRX)                                  56  1e-07
THIT_DROME (Q8IFW4) Thioredoxin T (ThioredoxinT)                       55  1e-07
THIO_GRIPA (P50338) Thioredoxin                                        55  1e-07
PDI_DROME (P54399) Protein disulfide-isomerase precursor (EC 5.3...    55  1e-07
THM4_ARATH (Q9SEU6) Thioredoxin M-type 4, chloroplast precursor ...    55  2e-07
THIO_PORYE (P50254) Thioredoxin                                        55  2e-07

>TXLA_SYNY3 (P73920) Thiol:disulfide interchange protein txlA
           homolog
          Length = 180

 Score =  131 bits (329), Expect = 2e-30
 Identities = 68/174 (39%), Positives = 100/174 (57%), Gaps = 3/174 (1%)

Query: 92  PTKDINRKVAIASTLAALGLFLATRLDF-GVSLKDLTANALPYEQALSNGKPTVVEFYAD 150
           P K  N  +A+ +   +  ++L  +    G+SL+     A+P   AL NG+PT+VEFYAD
Sbjct: 3   PAKIRNALLAVVAIALSAAVYLGFQTQTQGISLEAQAQRAIPLATALDNGRPTLVEFYAD 62

Query: 151 WCEVCRELAPDVYKIEQQYKDRVNFVMLNVDNTNWEQELDEFGVEGIPHFAFLDKEGNEE 210
           WC  C+ +APD+ ++++ Y   VNF MLNVDN  W  E+  + V+GIPHF +LD  G   
Sbjct: 63  WCTSCQAMAPDLAELKKNYGGSVNFAMLNVDNNKWLPEVLRYRVDGIPHFVYLDDTGTAI 122

Query: 211 GNVVGRLPRQLLLENVDALARGEASVPHARVVGKYSSAEARKVH-QVVDPRSHG 263
              +G  P ++L +N+ AL   E  +P+A V G+ S  E R +      PRSHG
Sbjct: 123 AESIGEQPLRVLEQNITALVAHE-PIPYANVTGQTSVVENRTIEADPTSPRSHG 175


>TXLA_SYNP7 (P35088) Thiol:disulfide interchange protein txlA
          Length = 191

 Score =  121 bits (303), Expect = 2e-27
 Identities = 62/166 (37%), Positives = 93/166 (55%), Gaps = 4/166 (2%)

Query: 100 VAIASTLAALGLFLATRLDFGVSLKDLTANALPYEQALSNGKPTVVEFYADWCEVCRELA 159
           +A A  L  L +  + +     SL  L   A PYE A++N +P ++EFYADWC  C+ +A
Sbjct: 17  IAAALVLTILVVLGSRQPSAAASLASLAEQATPYEVAIANDRPMLLEFYADWCTSCQAMA 76

Query: 160 PDVYKIEQQYKDRVNFVMLNVDNTNWEQELDEFGVEGIPHFAFLDKEGNEEGNVVGRLPR 219
             +  ++Q Y DR++FVMLN+DN  W  E+ ++ V+GIP F +L+ +G  +G  +G LPR
Sbjct: 77  GRIAALKQDYSDRLDFVMLNIDNDKWLPEVLDYNVDGIPQFVYLNGQGQPQGISIGELPR 136

Query: 220 QLLLENVDALARGEASVPHARVVGKYSSAEA---RKVHQVVDPRSH 262
            +L  N+DAL   +  +P+    G  S   A          DPRSH
Sbjct: 137 SVLAANLDALVEAQ-PLPYTNARGNLSEFSADLQPSRSSQTDPRSH 181


>THI1_SYNP7 (P12243) Thioredoxin 1 (TRX-1) (Thioredoxin M)
          Length = 106

 Score = 62.4 bits (150), Expect = 1e-09
 Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 3/94 (3%)

Query: 134 EQALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDRVNFVMLNVDNTNWEQELDEFG 193
           ++ L +  P +V+F+A WC  CR +AP V +I QQY D+V  V +N D         ++G
Sbjct: 13  QEVLESSIPVLVDFWAPWCGPCRMVAPVVDEIAQQYSDQVKVVKVNTDEN--PSVASQYG 70

Query: 194 VEGIPHFAFLDKEGNEEGNVVGRLPRQLLLENVD 227
           +  IP    + K+G     VVG +P+  L   +D
Sbjct: 71  IRSIPTL-MIFKDGQRVDTVVGAVPKTTLANTLD 103


>THIO_CHLAU (Q7M1B9) Thioredoxin (TRX)
          Length = 109

 Score = 59.3 bits (142), Expect = 9e-09
 Identities = 31/94 (32%), Positives = 49/94 (51%), Gaps = 3/94 (3%)

Query: 134 EQALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDRVNFVMLNVDNTNWEQELDEFG 193
           E+ L +  P VV+F+A WC  CR +AP + K+  +Y  R+    +N D+    Q   + G
Sbjct: 13  EKVLQSKTPVVVDFWAPWCGPCRVIAPILDKLAGEYAGRLTIAKVNTDDN--VQYASQLG 70

Query: 194 VEGIPHFAFLDKEGNEEGNVVGRLPRQLLLENVD 227
           ++G+P      K+G E G +VG  P  +  E  D
Sbjct: 71  LKGLPTLVIF-KDGREVGRLVGARPEAMYREIFD 103


>THI1_ANASP (P06544) Thioredoxin 1 (TRX-1) (Thioredoxin M)
          Length = 106

 Score = 58.9 bits (141), Expect = 1e-08
 Identities = 30/94 (31%), Positives = 52/94 (54%), Gaps = 3/94 (3%)

Query: 134 EQALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDRVNFVMLNVDNTNWEQELDEFG 193
           ++ L +  P +V+F+A WC  CR +AP V +I QQY+ ++  V +N D     Q   ++G
Sbjct: 13  QEVLDSDVPVLVDFWAPWCGPCRMVAPVVDEIAQQYEGKIKVVKVNTDEN--PQVASQYG 70

Query: 194 VEGIPHFAFLDKEGNEEGNVVGRLPRQLLLENVD 227
           +  IP    + K G +   VVG +P+  L + ++
Sbjct: 71  IRSIPTL-MIFKGGQKVDMVVGAVPKTTLSQTLE 103


>THIO_SYNY3 (P52231) Thioredoxin (TRX)
          Length = 106

 Score = 58.5 bits (140), Expect = 2e-08
 Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 3/94 (3%)

Query: 134 EQALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDRVNFVMLNVDNTNWEQELDEFG 193
           E  L +  P +V+F+A WC  CR +AP V +I QQY+ +V  V LN D         ++G
Sbjct: 13  EDVLDSELPVLVDFWAPWCGPCRMVAPVVDEISQQYEGKVKVVKLNTDEN--PNTASQYG 70

Query: 194 VEGIPHFAFLDKEGNEEGNVVGRLPRQLLLENVD 227
           +  IP    + K G     VVG +P+  L   ++
Sbjct: 71  IRSIPTL-MIFKGGQRVDMVVGAVPKTTLASTLE 103


>THIO_RHOSH (P08058) Thioredoxin (TRX)
          Length = 105

 Score = 57.8 bits (138), Expect = 3e-08
 Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 3/81 (3%)

Query: 142 PTVVEFYADWCEVCRELAPDVYKIEQQYKDRVNFVMLNVDNTNWEQELDEFGVEGIPHFA 201
           P VV+F+A+WC  CR++ P + ++ ++Y  +V  V +NVD       +   GV GIP   
Sbjct: 20  PVVVDFWAEWCGPCRQIGPALEELSKEYAGKVKIVKVNVDENPESPAM--LGVRGIPAL- 76

Query: 202 FLDKEGNEEGNVVGRLPRQLL 222
           FL K G    N VG  P+  L
Sbjct: 77  FLFKNGQVVSNKVGAAPKAAL 97


>THIM_CHLRE (P23400) Thioredoxin M-type, chloroplast precursor
           (TRX-M) (Thioredoxin CH2)
          Length = 140

 Score = 57.8 bits (138), Expect = 3e-08
 Identities = 29/91 (31%), Positives = 51/91 (55%), Gaps = 3/91 (3%)

Query: 137 LSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDRVNFVMLNVDNTNWEQELDEFGVEG 196
           L +  P +V+F+A WC  CR +AP V +I  +YKD++  V LN D +       E+G+  
Sbjct: 49  LESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDES--PNVASEYGIRS 106

Query: 197 IPHFAFLDKEGNEEGNVVGRLPRQLLLENVD 227
           IP    + K G +   ++G +P+  +++ V+
Sbjct: 107 IPTI-MVFKGGKKCETIIGAVPKATIVQTVE 136


>PDI_CHICK (P09102) Protein disulfide-isomerase precursor (EC
           5.3.4.1) (PDI) (Prolyl 4-hydroxylase beta subunit)
           (Cellular thyroid hormone binding protein) (Retina
           cognin) (R-cognin)
          Length = 515

 Score = 57.8 bits (138), Expect = 3e-08
 Identities = 39/104 (37%), Positives = 52/104 (49%), Gaps = 5/104 (4%)

Query: 100 VAIASTLAALGLFLATRLDFGVSLKDLTANALPYEQALSNGKPTVVEFYADWCEVCRELA 159
           VA+   +AALGL      + GV    L   A  +EQAL+  +  +VEFYA WC  C+ LA
Sbjct: 10  VALLCLVAALGLAEPLEEEDGV----LVLRAANFEQALAAHRHLLVEFYAPWCGHCKALA 65

Query: 160 PDVYKIEQQYKDRVNFVML-NVDNTNWEQELDEFGVEGIPHFAF 202
           P+  K   Q K   + + L  VD T   +   +FGV G P   F
Sbjct: 66  PEYAKAAAQLKAEGSEIRLAKVDATEEAELAQQFGVRGYPTIKF 109



 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 24/69 (34%), Positives = 35/69 (49%), Gaps = 2/69 (2%)

Query: 134 EQALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDRVNFVMLNVDNTNWEQELDEFG 193
           E A    K   VEFYA WC  C++LAP   K+ + Y+D  N V+  +D+T    E++   
Sbjct: 384 EVAFDENKNVFVEFYAPWCGHCKQLAPIWDKLGETYRDHENIVIAKMDST--ANEVEAVK 441

Query: 194 VEGIPHFAF 202
           +   P   F
Sbjct: 442 IHSFPTLKF 450


>THIO_RHORU (P10473) Thioredoxin (TRX)
          Length = 104

 Score = 57.4 bits (137), Expect = 3e-08
 Identities = 31/95 (32%), Positives = 48/95 (49%), Gaps = 3/95 (3%)

Query: 134 EQALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDRVNFVMLNVDNTNWEQELDEFG 193
           E  L    P  V+F+A+WC  CR+ AP + ++     D+V    +N+D     Q   ++G
Sbjct: 11  EDVLKADGPNXVDFWAEWCGPCRQXAPALEELATALGDKVTVAKINIDEN--PQTPSKYG 68

Query: 194 VEGIPHFAFLDKEGNEEGNVVGRLPRQLLLENVDA 228
           V GIP    + K+G      +G LP+  L E V+A
Sbjct: 69  VRGIPTL-MIFKDGQVAATKIGALPKTKLFEWVEA 102


>THIO_STRCO (P52230) Thioredoxin (TRX)
          Length = 110

 Score = 57.0 bits (136), Expect = 5e-08
 Identities = 31/106 (29%), Positives = 57/106 (53%), Gaps = 4/106 (3%)

Query: 122 SLKDLTANALPYEQALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDRVNFVMLNVD 181
           +LK +T ++   +  L N KP +V+F+A WC  CR++AP +  I  +Y D++  V LN+D
Sbjct: 4   TLKHVTDDSFE-QDVLKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNID 62

Query: 182 NTNWEQELDEFGVEGIPHFAFLDKEGNEEGNVVGRLPRQLLLENVD 227
                    ++GV  IP    + + G     +VG  P+  ++ +++
Sbjct: 63  EN--PGTAAKYGVMSIPTLN-VYQGGEVAKTIVGAKPKAAIVRDLE 105


>THIO_ALIAC (P80579) Thioredoxin (TRX)
          Length = 105

 Score = 57.0 bits (136), Expect = 5e-08
 Identities = 30/97 (30%), Positives = 50/97 (50%), Gaps = 3/97 (3%)

Query: 126 LTANALPYEQALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDRVNFVMLNVDNTNW 185
           +T     ++QA+   KP +V+F+A WC  CR +AP + +  + + D+V    LNVD    
Sbjct: 3   MTLTDANFQQAIQGDKPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDEN-- 60

Query: 186 EQELDEFGVEGIPHFAFLDKEGNEEGNVVGRLPRQLL 222
            +   +FG+  IP    L K G     ++G  P++ L
Sbjct: 61  PETTSQFGIMSIPTL-ILFKGGRPVKQLIGYQPKEQL 96


>THIM_PEA (P48384) Thioredoxin M-type, chloroplast precursor (TRX-M)
          Length = 172

 Score = 57.0 bits (136), Expect = 5e-08
 Identities = 27/94 (28%), Positives = 50/94 (52%), Gaps = 3/94 (3%)

Query: 134 EQALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDRVNFVMLNVDNTNWEQELDEFG 193
           E  + +  P +V+F+A WC  CR +AP + ++ ++Y  ++    LN D +       ++G
Sbjct: 79  ELVIGSETPVLVDFWAPWCGPCRMIAPIIDELAKEYAGKIKCYKLNTDES--PNTATKYG 136

Query: 194 VEGIPHFAFLDKEGNEEGNVVGRLPRQLLLENVD 227
           +  IP   F  K G  + +V+G +P+  L E V+
Sbjct: 137 IRSIPTVLFF-KNGERKDSVIGAVPKATLSEKVE 169


>THIM_BRANA (Q9XGS0) Thioredoxin M-type, chloroplast precursor
           (TRX-M)
          Length = 177

 Score = 56.6 bits (135), Expect = 6e-08
 Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 3/91 (3%)

Query: 137 LSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDRVNFVMLNVDNTNWEQELDEFGVEG 196
           L   +P VV+F+A WC  C+ + P V ++ QQY  ++ F  LN D++       ++GV  
Sbjct: 86  LKADEPVVVDFWAPWCGPCKMIDPIVNELAQQYTGKIKFFKLNTDDS--PATPGKYGVRS 143

Query: 197 IPHFAFLDKEGNEEGNVVGRLPRQLLLENVD 227
           IP      K G ++  ++G +P+  L  ++D
Sbjct: 144 IPTIMIFVK-GEKKDTIIGAVPKTTLATSID 173


>THIO_PSEAE (Q9X2T1) Thioredoxin (TRX)
          Length = 108

 Score = 55.8 bits (133), Expect = 1e-07
 Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 3/95 (3%)

Query: 134 EQALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDRVNFVMLNVDNTNWEQELDEFG 193
           +  L    P +V+++A+WC  C+ +AP + ++ + Y+ ++    LN+D    +    ++G
Sbjct: 15  QDVLKADGPVLVDYWAEWCGPCKMIAPVLDEVARDYQGKLKVCKLNIDEN--QDTPPKYG 72

Query: 194 VEGIPHFAFLDKEGNEEGNVVGRLPRQLLLENVDA 228
           V GIP    L K+GN E   VG L +  L   +DA
Sbjct: 73  VRGIPTL-MLFKDGNVEATKVGALSKSQLAAFLDA 106


>THIT_DROME (Q8IFW4) Thioredoxin T (ThioredoxinT)
          Length = 157

 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 3/78 (3%)

Query: 131 LPYEQALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDRVNFVMLNVDNTNWEQELD 190
           L  +  L+  K  V++FYADWC  C+ +AP + ++  +Y DRV  + +NVD    E    
Sbjct: 11  LDQQLILAEDKLVVIDFYADWCGPCKIIAPKLDELAHEYSDRVVVLKVNVDEN--EDITV 68

Query: 191 EFGVEGIPHFAFLDKEGN 208
           E+ V  +P F F+ K GN
Sbjct: 69  EYNVNSMPTFVFI-KGGN 85


>THIO_GRIPA (P50338) Thioredoxin
          Length = 109

 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 28/94 (29%), Positives = 50/94 (52%), Gaps = 3/94 (3%)

Query: 133 YEQALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDRVNFVMLNVDNTNWEQELDEF 192
           +E+ +++ +P +V+F+A WC  CR +A  + +I   YKD++  V +N D         E+
Sbjct: 12  HEEVINSRQPVLVDFWAPWCGPCRMIASTIDEIAHDYKDKLKVVKVNTDQN--PTIATEY 69

Query: 193 GVEGIPHFAFLDKEGNEEGNVVGRLPRQLLLENV 226
           G+  IP    +   G +   VVG +P+  LL  +
Sbjct: 70  GIRSIP-TVMIFINGKKVDTVVGAVPKLTLLNTL 102


>PDI_DROME (P54399) Protein disulfide-isomerase precursor (EC
           5.3.4.1) (PDI)
          Length = 496

 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 2/74 (2%)

Query: 136 ALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDRVNFVMLNVDNTNWEQELDEFGVE 195
           AL   K  +VEFYA WC  C++LAP   ++ ++YKD  + V+  +D+T    EL+   + 
Sbjct: 381 ALDKSKSVLVEFYAPWCGHCKQLAPIYDQLAEKYKDNEDIVIAKMDST--ANELESIKIS 438

Query: 196 GIPHFAFLDKEGNE 209
             P   +  KE N+
Sbjct: 439 SFPTIKYFRKEDNK 452



 Score = 47.0 bits (110), Expect = 5e-05
 Identities = 29/102 (28%), Positives = 52/102 (50%), Gaps = 5/102 (4%)

Query: 102 IASTLAALGLFLATRLDFGVSLKDLTANALPYEQALSNGKPTVVEFYADWCEVCRELAPD 161
           +A++  A       +++ GV    L A    ++Q +++ +  +VEFYA WC  C+ LAP+
Sbjct: 10  LAASYVAASAEAEVKVEEGV----LVATVDNFKQLIADNEFVLVEFYAPWCGHCKALAPE 65

Query: 162 VYKIEQQYKDRVNFVML-NVDNTNWEQELDEFGVEGIPHFAF 202
             K  QQ  ++ + + L  VD T   +  +++ V G P   F
Sbjct: 66  YAKAAQQLAEKESPIKLAKVDATVEGELAEQYAVRGYPTLKF 107


>THM4_ARATH (Q9SEU6) Thioredoxin M-type 4, chloroplast precursor
           (TRX-M4)
          Length = 193

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 39/175 (22%), Positives = 79/175 (44%), Gaps = 16/175 (9%)

Query: 66  PSTVNGESETCKPTSSTADASGLPQLPTKDINRKVAIASTLAALGLFLATRLDFGVSL-- 123
           P   +  S +  P+ S    S    L  + +    ++ +  A+LG    TR+  G  +  
Sbjct: 17  PIAASVSSSSAAPSVSRRRISPARFLEFRGLKSSRSLVTQSASLGANRRTRIARGGRIAC 76

Query: 124 --KDLTANALPYE---------QALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDR 172
             +D TA A+            + L +  P +VEF+A WC  CR + P V ++ + +  +
Sbjct: 77  EAQDTTAAAVEVPNLSDSEWQTKVLESDVPVLVEFWAPWCGPCRMIHPIVDQLAKDFAGK 136

Query: 173 VNFVMLNVDNTNWEQELDEFGVEGIPHFAFLDKEGNEEGNVVGRLPRQLLLENVD 227
             F  +N D +      + +G+  +P    + K G ++ +++G +PR+ L + ++
Sbjct: 137 FKFYKINTDES--PNTANRYGIRSVP-TVIIFKGGEKKDSIIGAVPRETLEKTIE 188


>THIO_PORYE (P50254) Thioredoxin
          Length = 107

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 26/94 (27%), Positives = 50/94 (52%), Gaps = 3/94 (3%)

Query: 134 EQALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDRVNFVMLNVDNTNWEQELDEFG 193
           ++ ++N  P +V+F+A WC  CR ++P V +I ++Y+  +  V +N D+        E+G
Sbjct: 13  QEVINNNLPVLVDFWAPWCGPCRMVSPVVDEIAEEYESSIKVVKINTDDN--PTIAAEYG 70

Query: 194 VEGIPHFAFLDKEGNEEGNVVGRLPRQLLLENVD 227
           +  IP    + K G     V+G +P+  L   ++
Sbjct: 71  IRSIPTL-MIFKAGERVDTVIGAVPKSTLASTLN 103


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.316    0.133    0.390 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,136,944
Number of Sequences: 164201
Number of extensions: 1310392
Number of successful extensions: 3638
Number of sequences better than 10.0: 243
Number of HSP's better than 10.0 without gapping: 188
Number of HSP's successfully gapped in prelim test: 55
Number of HSP's that attempted gapping in prelim test: 3339
Number of HSP's gapped (non-prelim): 322
length of query: 263
length of database: 59,974,054
effective HSP length: 108
effective length of query: 155
effective length of database: 42,240,346
effective search space: 6547253630
effective search space used: 6547253630
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)