BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0550.6
         (680 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

HPC2_YEAST (Q01448) Histone promoter control 2 protein                 47  1e-04
RGP1_MOUSE (P46061) Ran GTPase-activating protein 1                    44  0.002
SSP5_STRGN (P16952) Agglutinin receptor precursor (SSP-5)              43  0.002
SMC2_MOUSE (Q8CG48) Structural maintenance of chromosome 2-like ...    41  0.009
MYHB_RABIT (P35748) Myosin heavy chain, smooth muscle isoform (S...    41  0.009
TRIA_HUMAN (Q15643) Thyroid receptor interacting protein 11 (TRI...    41  0.012
GRPE_GLOVI (Q7NDP1) GrpE protein (HSP-70 cofactor)                     40  0.020
PUF6_YEAST (Q04373) PUF6 protein                                       39  0.034
MYH7_PIG (P79293) Myosin heavy chain, cardiac muscle beta isofor...    39  0.034
MYSS_RABIT (P02562) Myosin heavy chain, skeletal muscle (Fragments)    39  0.045
YVQH_BACSU (O32201) Hypothetical protein yvqH                          39  0.059
VDP_RAT (P41542) General vesicular transport factor p115 (Transc...    39  0.059
VAT_CAMVC (P03549) Aphid transmission protein (Protein 2)              39  0.059
TPM2_BIOGL (P43689) Tropomyosin 2 (TMII)                               39  0.059
MYSC_CAEEL (P12845) Myosin heavy chain C (MHC C)                       39  0.059
MYHA_RAT (Q9JLT0) Myosin heavy chain, nonmuscle type B (Cellular...    39  0.059
MYHA_BOVIN (Q27991) Myosin heavy chain, nonmuscle type B (Cellul...    39  0.059
MYH7_HUMAN (P12883) Myosin heavy chain, cardiac muscle beta isof...    39  0.059
APSB_EMENI (O60039) Anucleate primary sterigmata protein B             39  0.059
YJ9C_YEAST (P47166) Hypothetical 81.2 kDa protein in NMD5-HOM6 i...    38  0.077

>HPC2_YEAST (Q01448) Histone promoter control 2 protein
          Length = 623

 Score = 47.4 bits (111), Expect = 1e-04
 Identities = 75/327 (22%), Positives = 135/327 (40%), Gaps = 26/327 (7%)

Query: 253 SDNNPLFPFYWTKNPRRKISVSYDALDESEQGVADYLRTLPVISGHDLIEASKSGTLNQF 312
           SD+  LF  +  K   RKI    + L ++   V     +  +ISG      S SG  +  
Sbjct: 45  SDSEDLFNKFSNKKTNRKIPNIAEELAKNRNYVKGASPSPIIISGSS--STSPSGPSSSS 102

Query: 313 FTTMG--KSKVDANPIKMKEYLAQSAAAAKKRAAETEQKKKNEGTSGSDNVRDPKRQKTS 370
              MG   ++ + N +++ ++         K   +TE+K++N      DN   P+R  +S
Sbjct: 103 TNPMGIPTNRFNKNTVELYQHSPSPVMTTNK--TDTEEKRQNN--RNMDNKNTPERGSSS 158

Query: 371 SAAGGRPLHQSTLDPRSHPAEKKKGHDNVPPPQQDSSALINRPPTPFNQA-GPSLAIGGE 429
            AA  + L  S+L   S   + K  H N     ++S+A  N  P+ + +      +I   
Sbjct: 159 FAA--KQLKISSLLTISSNEDSKTLHINDTNGNKNSNAASNNIPSAYAELHTEGNSIESL 216

Query: 430 APPPLLNLSDPHFNGLE----FMTRTFDNRIHKDIS-GQGPPN--IASVAIHHALSAAST 482
             PP    S P    L       T+  D  I KD   G   P   IA  +    L   ST
Sbjct: 217 IKPP----SSPRNKSLTPKVILPTQNMDGTIAKDPHLGDNTPGILIAKTSSPVNLDVEST 272

Query: 483 VAGMAQCVKELISAKNRYEKKAADYKTAYERAKTDAETANKKLKSAEEKCAKLTEDLAAS 542
              + +  K   S K    K  A+ K + +R+ +    ++  + S+++  ++  +  +++
Sbjct: 273 AQSLGKFNKSTNSLKAALTKAPAE-KVSLKRSISSVTNSDSNISSSKKPTSEKAKKSSSA 331

Query: 543 DLLLQK---TKSLKEAINDKHTAIQAK 566
             +L K   TK+ K+A ++   + + K
Sbjct: 332 SAILPKPTTTKTSKKAASNSSDSTRKK 358


>RGP1_MOUSE (P46061) Ran GTPase-activating protein 1
          Length = 589

 Score = 43.5 bits (101), Expect = 0.002
 Identities = 32/117 (27%), Positives = 59/117 (50%), Gaps = 24/117 (20%)

Query: 554 EAINDKHTAIQAKYQKLEKKYDRLNASIIGRASLQYDQGFLTAKEQISVVEPGFDLSRIG 613
           EA+ DK     A+ +KL+     LN + +G              EQ+  V   F+++++ 
Sbjct: 315 EAVADK-----AELEKLD-----LNGNALGEEGC----------EQLQEVMDSFNMAKV- 353

Query: 614 WLKEIKDGQVVGDDDISLDLLPQFDDESEPEEDGEDGNEQHRNEDQEKEDPQAGTSQ 670
            L  + D +  G+D+   +   + D+E E EED ED +E+   +++E+E PQ G+ +
Sbjct: 354 -LASLSDDE--GEDEDEEEEGEEDDEEEEDEEDEEDDDEEEEEQEEEEEPPQRGSGE 407


>SSP5_STRGN (P16952) Agglutinin receptor precursor (SSP-5)
          Length = 1500

 Score = 43.1 bits (100), Expect = 0.002
 Identities = 36/132 (27%), Positives = 61/132 (45%), Gaps = 10/132 (7%)

Query: 453 DNRIHKDISGQGPPNIASVAIHHALSAASTVAGMAQCVKELISAKNRYEKKAADYK---T 509
           D++  KD+       +  +   +A + A   A +AQ  K+L + K   E    DY+   +
Sbjct: 174 DDKYQKDLKSH-QEEVEKINTANATAKAEYEAKLAQYQKDLATVKKANEDSQQDYQNKLS 232

Query: 510 AYERAKTDAETANKKLKSAEEKCAKLTEDLAASDLLLQKTKSLKEAINDKHTAIQAKYQK 569
           AY+      + AN + K A EK  K  E+ A ++ L    K   EAI  ++   +A Y+ 
Sbjct: 233 AYQTELARVQKANAEAKEAYEKAVK--ENTAKNEAL----KVENEAIKQRNETAKATYEA 286

Query: 570 LEKKYDRLNASI 581
             K+Y+   A+I
Sbjct: 287 AMKQYEADLAAI 298


>SMC2_MOUSE (Q8CG48) Structural maintenance of chromosome 2-like 1
           protein (Chromosome-associated protein E) (XCAP-E
           homolog) (FGF-inducible protein 16)
          Length = 1191

 Score = 41.2 bits (95), Expect = 0.009
 Identities = 61/271 (22%), Positives = 104/271 (37%), Gaps = 32/271 (11%)

Query: 326 IKMKEYLAQSAAAAKKRAAETEQ--KKKNEGTSGS-----DNVRDPKRQKTSSAAGGRPL 378
           + ++E L+++    K    E E+  ++K++ T G      D   + +R  T S +     
Sbjct: 261 VNLQEVLSENEKKIKALNCEIEELERRKDKETGGKLKSLEDACAEAQRVNTKSQSA---- 316

Query: 379 HQSTLDPRSHPAEKKKGHDNVPPPQQDSSALI--NRPPTPFNQAGPSLAIGGEAPPPLLN 436
               L  ++  +E+ K  +      +DS AL    +           L          L 
Sbjct: 317 --FDLKKKNLASEETKRKELQNSMAEDSKALAAKEKEVKKITDGLHGLQEASNKDAEALA 374

Query: 437 LSDPHFNGLEFMTRTFDNRIHKDISGQGPPNIASVAIHHALSAASTVAGMAQ-----CVK 491
            +  HFN +     + ++     ++GQ       +A  + +S A T A  AQ       +
Sbjct: 375 AAQQHFNAVSAGLSSNEDGAEATLAGQ------MIACKNDISKAQTEAKQAQMKLKHAQQ 428

Query: 492 ELISAKNRYEKKAADYKT------AYERAKTDAETANKKLKSAEEKCAKLTEDLAASDLL 545
           EL S +   +K  + YK       A ++AK   ET  KKL   E K  KL E        
Sbjct: 429 ELKSKQAEVKKMDSGYKKDQDAFEAVKKAKEKLETEMKKLNYEENKEEKLLEKHRQLSRD 488

Query: 546 LQKTKSLKEAINDKHTAIQAKYQKLEKKYDR 576
           +   K   EA+  K   +Q  Y+  EK ++R
Sbjct: 489 INNLKGKHEALLAKFPNLQFAYKDPEKNWNR 519



 Score = 33.1 bits (74), Expect = 2.5
 Identities = 22/107 (20%), Positives = 52/107 (48%), Gaps = 1/107 (0%)

Query: 495 SAKNRYEKKAADYKTAYERAKTDAETANKKLKSAEEKCAKLTEDLAASDLLLQKTKSLKE 554
           +A+   EK+  D +   + AKT A+ ++KK+K  +++   +T +L          +   +
Sbjct: 782 NAEAEREKELKDAQKKLDCAKTKADASSKKMKEKQQEVEAITLELEELKREHASNEQQLD 841

Query: 555 AINDKHTAIQAKYQKLEKKYDRLNASI-IGRASLQYDQGFLTAKEQI 600
           A+N+   A + + +K+  +  +   S+   +  L   +  +TA++ I
Sbjct: 842 AVNEAIKAYEGQIEKMAAEVAKNKESVNKAQDELMKQKQIITAQDNI 888


>MYHB_RABIT (P35748) Myosin heavy chain, smooth muscle isoform (SMMHC)
          Length = 1972

 Score = 41.2 bits (95), Expect = 0.009
 Identities = 34/155 (21%), Positives = 69/155 (43%), Gaps = 4/155 (2%)

Query: 446  EFMTRTFDNRIHKDISGQGPPNIASVAIHHALSAASTVAGMAQCVKELISAKNR---YEK 502
            E+ T   D R  + ++      +        L A S + G  + +K+L+  + +   +++
Sbjct: 1600 EYETELEDERKQRALAAAAKKKLEGDLKDLELQADSAIKGREEAIKQLLKLQAQMKDFQR 1659

Query: 503  KAADYKTAYERAKTDAETANKKLKSAEEKCAKLTEDLAASDLLLQKTKSLKEAINDKHTA 562
            +  D + + +     A+   KK KS E    +L EDLAA++   ++    KE + ++  +
Sbjct: 1660 ELEDARASRDEIFATAKENEKKAKSLEADLMQLQEDLAAAERARKQADLEKEELAEELAS 1719

Query: 563  IQAKYQKLEKKYDRLNASIIG-RASLQYDQGFLTA 596
              +    L+ +  RL A I      L+ +QG + A
Sbjct: 1720 SLSGRNALQDEKRRLEARIAQLEEELEEEQGNMEA 1754


>TRIA_HUMAN (Q15643) Thyroid receptor interacting protein 11
           (TRIP-11) (Golgi-associated microtubule-binding protein
           210) (GMAP-210) (Trip230) (Clonal evolution related gene
           on chromosome 14)
          Length = 1979

 Score = 40.8 bits (94), Expect = 0.012
 Identities = 34/125 (27%), Positives = 57/125 (45%), Gaps = 7/125 (5%)

Query: 488 QCVKELISAKNRYEKKAADYKTAYERAKTDAETANKKLKSAEEKCAKLTEDLAASDLLLQ 547
           +  K +I  K++  K+  +  +   + K D     K++   E+    +T++L   D+  +
Sbjct: 506 EATKHMILIKDQLSKQQNEGDSIISKLKQDLNDEKKRVHQLEDDKMDITKEL---DVQKE 562

Query: 548 KTKSLKEAINDKHTAIQAKYQKLEKKYDRLNASIIGRASLQYDQGFLTAKEQISVVEPGF 607
           K    + A+ND H   Q    K+E   D+LN S     S+Q +   L  KE I   E   
Sbjct: 563 KLIQSEVALNDLHLTKQKLEDKVENLVDQLNKSQESNVSIQKEN--LELKEHIRQNEE-- 618

Query: 608 DLSRI 612
           +LSRI
Sbjct: 619 ELSRI 623


>GRPE_GLOVI (Q7NDP1) GrpE protein (HSP-70 cofactor)
          Length = 196

 Score = 40.0 bits (92), Expect = 0.020
 Identities = 32/166 (19%), Positives = 72/166 (43%), Gaps = 7/166 (4%)

Query: 466 PNIASVAIHHALSAASTVAGMAQCVKELISAKNRYEKKAADYKTAYERAKTDAETANKKL 525
           P+ A  A   A +A +T  G    + +L +  +  +KK ADY+  Y R   D +   K+ 
Sbjct: 16  PSYAEAATTEASAAEAT--GFIARIDQLAAENSDLQKKLADYEQKYTRLMADFDNFRKRT 73

Query: 526 KSAEEKCAKLTEDLAASDLL-----LQKTKSLKEAINDKHTAIQAKYQKLEKKYDRLNAS 580
           +  +++ A         D+L       + ++  +  N++   +   YQ++ +++  +   
Sbjct: 74  QREKDELAYFVSAKLLKDILPVFDNFDRARAFAQPDNEREEKLHNSYQQVYRQFLSVLEK 133

Query: 581 IIGRASLQYDQGFLTAKEQISVVEPGFDLSRIGWLKEIKDGQVVGD 626
           +   A     Q F  A+ +  + E    +S+   + E++ G ++ D
Sbjct: 134 MGVTAMEAIGQPFDPAQHEAILREESAGVSQETVVAELQKGYLLAD 179


>PUF6_YEAST (Q04373) PUF6 protein
          Length = 656

 Score = 39.3 bits (90), Expect = 0.034
 Identities = 25/70 (35%), Positives = 33/70 (46%), Gaps = 5/70 (7%)

Query: 615 LKEIKDGQVVGDDDISLDLLPQFDDESEPEEDG---EDGNEQHRNEDQEKE--DPQAGTS 669
           L + +D      DD  LD L   D E+E E D     D +E+H NE++EKE  D   G  
Sbjct: 41  LSKKEDAVSSSSDDDDLDDLSTSDSEAEEEADELDISDDSEEHENENEEKEGKDKSEGGE 100

Query: 670 QGNNANNENL 679
            GN+     L
Sbjct: 101 NGNHTEQRKL 110


>MYH7_PIG (P79293) Myosin heavy chain, cardiac muscle beta isoform
            (MyHC-beta)
          Length = 1935

 Score = 39.3 bits (90), Expect = 0.034
 Identities = 20/84 (23%), Positives = 46/84 (53%), Gaps = 1/84 (1%)

Query: 508  KTAYERAKTDAETANKKLKSAEEKCAKLTEDLAASDLLLQKTKSLKEAINDKHTAIQAKY 567
            K AYE +    ET+ ++ K+ +E+ + LTE L +S   + + + +++ +  +   +Q+  
Sbjct: 1485 KNAYEESLEHLETSKRENKNLQEEISDLTEQLGSSGKTIHELEKVRKQLEAEKLELQSAL 1544

Query: 568  QKLEKKYDRLNASIIGRASLQYDQ 591
            ++ E   +     I+ RA L+++Q
Sbjct: 1545 EESEASLEHEEGKIL-RAQLEFNQ 1567


>MYSS_RABIT (P02562) Myosin heavy chain, skeletal muscle (Fragments)
          Length = 1084

 Score = 38.9 bits (89), Expect = 0.045
 Identities = 27/122 (22%), Positives = 59/122 (48%), Gaps = 1/122 (0%)

Query: 508 KTAYERAKTDAETANKKLKSAEEKCAKLTEDLAASDLLLQKTKSLKEAINDKHTAIQAKY 567
           K AYE +    ET  ++ K+ +++ + LTE +A S   + + + +K+ I+ + + +QA  
Sbjct: 634 KNAYEESLDHLETLKRENKNLQQEISDLTEQIAESAKHIHELEKVKKQIDQEKSELQAAL 693

Query: 568 QKLEKKYDRLNASIIGRASLQYDQGFLTAKEQISVVEPGFDLSRIGWLKEIKDGQVVGDD 627
           ++ E   +     I+ R  L+ +Q       +I+  +   D  +   L+ ++  Q   D 
Sbjct: 694 EEAEGSLEHEEGKIL-RIQLELNQVKSEIDRKIAEKDEEIDQLKRNHLRVVESMQSTLDA 752

Query: 628 DI 629
           +I
Sbjct: 753 EI 754



 Score = 31.2 bits (69), Expect = 9.4
 Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 9/99 (9%)

Query: 492 ELISAKNRYEKKAADYKTAYERAKTDAETANKKLKSAEEKCAKLTEDLAASDLLLQKTKS 551
           EL  AK   EK A + K          +   +++   +E  AKLT++  A     Q+T  
Sbjct: 116 ELTLAKVEKEKHATENKV---------KNLTEEMAGLDETIAKLTKEKKALQEAHQQTLD 166

Query: 552 LKEAINDKHTAIQAKYQKLEKKYDRLNASIIGRASLQYD 590
             +A  DK   +     KLE++ D L  S+     ++ D
Sbjct: 167 DLQAEEDKVNTLTKAKTKLEQQVDDLEGSLEQEKKIRMD 205


>YVQH_BACSU (O32201) Hypothetical protein yvqH
          Length = 225

 Score = 38.5 bits (88), Expect = 0.059
 Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 15/107 (14%)

Query: 484 AGMAQCVKELISAKNRYEKKAADYKTAYERAKTDAETANKKLKSAEEKCAKLTEDLAASD 543
           AG  +  K+ ++     E KAA++K +YE+A +              + A L E LAA +
Sbjct: 80  AGEEELAKKALTEMKYLEGKAAEHKASYEQANS--------------QLADLKEQLAALE 125

Query: 544 LLLQKTKSLKEAINDKHTAIQAKYQKLEKKYDRLNASIIGRASLQYD 590
             LQ  K  K+A+  +  A +AK + +   +D++++    R  L+ +
Sbjct: 126 TKLQDVKDKKQALIARANAAKAK-EHMNTTFDKIDSESAYREFLRIE 171


>VDP_RAT (P41542) General vesicular transport factor p115
           (Transcytosis associated protein) (TAP) (Vesicle docking
           protein)
          Length = 959

 Score = 38.5 bits (88), Expect = 0.059
 Identities = 53/209 (25%), Positives = 92/209 (43%), Gaps = 25/209 (11%)

Query: 453 DNRIHKDISGQGPPNIASVAIHHALSAASTVAGMAQCVKELISAKNRYEKKAADYKTAYE 512
           +N     +SG     +A+ +   A   A     ++    +L S      +   +     +
Sbjct: 761 ENLRSSQVSGMSEQALATCSPRDAEQVAELKQELSALKSQLCSQSLEITRLQTENSELQQ 820

Query: 513 RAKTDAETANKKLKSAEEKCAKLTEDLAASDLLLQKTKSLK---EAINDKHTAIQAKYQK 569
           RA+T A++   + +S     AK T+       LLQ+TK LK   +A++++ TAIQ     
Sbjct: 821 RAETLAKSVPVEGESELVTAAKTTDVEGRLSALLQETKELKNEIKALSEERTAIQ----- 875

Query: 570 LEKKYDRLNASIIGRASLQYDQGFL------TAKEQ--ISVVEPGFDLSRIGWLKEIKD- 620
             K+ D  N++I   A LQ ++  L      + KEQ  + V+    D   +    ++KD 
Sbjct: 876 --KQLDSSNSTI---AILQTEKDKLYLEVTDSKKEQDDLLVLLADQDQKILSLKSKLKDL 930

Query: 621 GQVVGDDDISLDLLPQFDDESEPEEDGED 649
           G  V ++D S D   Q DD+ E ++   D
Sbjct: 931 GHPVEEEDESGD---QEDDDDELDDGDRD 956


>VAT_CAMVC (P03549) Aphid transmission protein (Protein 2)
          Length = 159

 Score = 38.5 bits (88), Expect = 0.059
 Identities = 18/63 (28%), Positives = 32/63 (50%)

Query: 495 SAKNRYEKKAADYKTAYERAKTDAETANKKLKSAEEKCAKLTEDLAASDLLLQKTKSLKE 554
           +AKN ++ +  DY +  +  K+  E  N ++K+ E     L   +    L  ++ K LKE
Sbjct: 86  TAKNIFKSRGVDYSSQLKEVKSLLEAQNTRIKNLENAIQSLDNKIEPEPLTKEEVKELKE 145

Query: 555 AIN 557
           +IN
Sbjct: 146 SIN 148


>TPM2_BIOGL (P43689) Tropomyosin 2 (TMII)
          Length = 284

 Score = 38.5 bits (88), Expect = 0.059
 Identities = 28/110 (25%), Positives = 56/110 (50%), Gaps = 10/110 (9%)

Query: 486 MAQCVKELISAKNRYEKKAADYKTAYERAKTDAETANK-------KLKSAEEKCAKLTED 538
           M Q V+++   KN+ E++  + +  +   + D +TAN+       KL+++E+  A+L  D
Sbjct: 25  MEQKVRDVEETKNKLEEEFNNLQKKFSNLQNDFDTANEGLTEAQTKLEASEKHVAELESD 84

Query: 539 LAASDLLLQKTKSLKEAINDKHTAIQAKYQKLEKKYDRLNASIIGRASLQ 588
            A    L ++ + L+E +      +Q+  +KLE+     + S  GR  L+
Sbjct: 85  TAG---LNRRIQLLEEDLERSEERLQSATEKLEEASKAADESERGRKVLE 131


>MYSC_CAEEL (P12845) Myosin heavy chain C (MHC C)
          Length = 1947

 Score = 38.5 bits (88), Expect = 0.059
 Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 4/98 (4%)

Query: 485  GMAQCVKELISAKNRY----EKKAADYKTAYERAKTDAETANKKLKSAEEKCAKLTEDLA 540
            G  + V+E ++A N      E K AD     E  +  A   NK+ K  E +CA L ++  
Sbjct: 912  GSTREVEERMTAMNEQKVALEGKLADASKKLEVEEARAVEINKQKKLVEAECADLKKNCQ 971

Query: 541  ASDLLLQKTKSLKEAINDKHTAIQAKYQKLEKKYDRLN 578
              DL L+K ++ K A   +  A+Q + ++ ++   +LN
Sbjct: 972  DVDLSLRKVEAEKNAKEHQIRALQDEMRQQDENISKLN 1009


>MYHA_RAT (Q9JLT0) Myosin heavy chain, nonmuscle type B (Cellular
            myosin heavy chain, type B) (Nonmuscle myosin heavy
            chain-B) (NMMHC-B)
          Length = 1976

 Score = 38.5 bits (88), Expect = 0.059
 Identities = 22/92 (23%), Positives = 43/92 (45%)

Query: 480  ASTVAGMAQCVKELISAKNRYEKKAADYKTAYERAKTDAETANKKLKSAEEKCAKLTEDL 539
            A  +A  A     L+  K R E + A  +   E  +++ E  N + +    +   L  +L
Sbjct: 1714 ADEIANSASGKSALLDEKRRLEARIAQLEEELEEEQSNMELLNDRFRKTTLQVDTLNTEL 1773

Query: 540  AASDLLLQKTKSLKEAINDKHTAIQAKYQKLE 571
            AA     QK+ + ++ +  ++  ++AK Q+LE
Sbjct: 1774 AAERSAAQKSDNARQQLERQNKELKAKLQELE 1805



 Score = 32.0 bits (71), Expect = 5.5
 Identities = 24/105 (22%), Positives = 49/105 (45%), Gaps = 21/105 (20%)

Query: 492  ELISAKNRYEKKAADYKTAYERAKTD-------AETANKKLKSAEEKCAKLTEDLAASDL 544
            E+I    + + +  DY+   E A+         ++ + KKLKS E +  +L E+LA+S+ 
Sbjct: 1642 EVIKQLRKLQAQMKDYQRELEEARASRDEIFAQSKESEKKLKSLEAEILQLQEELASSER 1701

Query: 545  L--------------LQKTKSLKEAINDKHTAIQAKYQKLEKKYD 575
                           +  + S K A+ D+   ++A+  +LE++ +
Sbjct: 1702 ARRHAEQERDELADEIANSASGKSALLDEKRRLEARIAQLEEELE 1746


>MYHA_BOVIN (Q27991) Myosin heavy chain, nonmuscle type B (Cellular
            myosin heavy chain, type B) (Nonmuscle myosin heavy
            chain-B) (NMMHC-B)
          Length = 1976

 Score = 38.5 bits (88), Expect = 0.059
 Identities = 22/92 (23%), Positives = 43/92 (45%)

Query: 480  ASTVAGMAQCVKELISAKNRYEKKAADYKTAYERAKTDAETANKKLKSAEEKCAKLTEDL 539
            A  +A  A     L+  K R E + A  +   E  +++ E  N + +    +   L  +L
Sbjct: 1714 ADEIANSASGKSALLDEKRRLEARIAQLEEELEEEQSNMELLNDRFRKTTLQVDTLNTEL 1773

Query: 540  AASDLLLQKTKSLKEAINDKHTAIQAKYQKLE 571
            AA     QK+ + ++ +  ++  ++AK Q+LE
Sbjct: 1774 AAERSAAQKSDNARQQLERQNKELKAKLQELE 1805



 Score = 32.0 bits (71), Expect = 5.5
 Identities = 24/105 (22%), Positives = 49/105 (45%), Gaps = 21/105 (20%)

Query: 492  ELISAKNRYEKKAADYKTAYERAKTD-------AETANKKLKSAEEKCAKLTEDLAASDL 544
            E+I    + + +  DY+   E A+         ++ + KKLKS E +  +L E+LA+S+ 
Sbjct: 1642 EVIKQLRKLQAQMKDYQRELEEARASRDEIFAQSKESEKKLKSLEAEILQLQEELASSER 1701

Query: 545  L--------------LQKTKSLKEAINDKHTAIQAKYQKLEKKYD 575
                           +  + S K A+ D+   ++A+  +LE++ +
Sbjct: 1702 ARRHAEQERDELADEIANSASGKSALLDEKRRLEARIAQLEEELE 1746


>MYH7_HUMAN (P12883) Myosin heavy chain, cardiac muscle beta isoform
            (MyHC-beta)
          Length = 1935

 Score = 38.5 bits (88), Expect = 0.059
 Identities = 20/84 (23%), Positives = 45/84 (52%), Gaps = 1/84 (1%)

Query: 508  KTAYERAKTDAETANKKLKSAEEKCAKLTEDLAASDLLLQKTKSLKEAINDKHTAIQAKY 567
            K AYE +    ET  ++ K+ +E+ + LTE L +S   + + + +++ +  +   +Q+  
Sbjct: 1485 KNAYEESLEHLETFKRENKNLQEEISDLTEQLGSSGKTIHELEKVRKQLEAEKMELQSAL 1544

Query: 568  QKLEKKYDRLNASIIGRASLQYDQ 591
            ++ E   +     I+ RA L+++Q
Sbjct: 1545 EEAEASLEHEEGKIL-RAQLEFNQ 1567



 Score = 32.0 bits (71), Expect = 5.5
 Identities = 30/99 (30%), Positives = 43/99 (43%), Gaps = 7/99 (7%)

Query: 490  VKELISAKNRYEKKAADYKTAYERAKT---DAETANKKL----KSAEEKCAKLTEDLAAS 542
            V  L  AK + E++  D + + E+ K    D E A +KL    K  +E    L  D    
Sbjct: 1017 VNTLTKAKVKLEQQVDDLEGSLEQEKKVRMDLERAKRKLEGDLKLTQESIMDLENDKQQL 1076

Query: 543  DLLLQKTKSLKEAINDKHTAIQAKYQKLEKKYDRLNASI 581
            D  L+K      A+N +    QA   +L+KK   L A I
Sbjct: 1077 DERLKKKDFELNALNARIEDEQALGSQLQKKLKELQARI 1115


>APSB_EMENI (O60039) Anucleate primary sterigmata protein B
          Length = 1051

 Score = 38.5 bits (88), Expect = 0.059
 Identities = 40/181 (22%), Positives = 81/181 (44%), Gaps = 20/181 (11%)

Query: 501 EKKAADYKTAYERAKTDAETANKKLKSAEEKCAKLTEDLAASD----LLLQKTKSLKEAI 556
           E++ A ++     A+ + +    +L    E+C +LTEDL   D     L  + +S  E I
Sbjct: 389 EERDAAFQELRAEAQEELDALGDELDQKIEECQRLTEDLRTQDDNLRALQAEMRSASEGI 448

Query: 557 ----NDKHTAIQAKYQKLEKKYDRLNASIIGRASLQYDQGFLTAKEQISVVEPGFDLSRI 612
                D    +Q +Y+ ++++ ++ N  +    SL+       +K Q   V+     + I
Sbjct: 449 IRLEEDAQNNLQ-RYKAVQQELEQCNEEM---ESLEKSLYEANSKVQRLTVQIESSQNEI 504

Query: 613 GWLKEIKDGQVVGDDDISLDLLP-----QFDDESEPEEDGEDGNEQHRNE---DQEKEDP 664
            +L+E +DG  +   D+  +L       Q + +   E +G    E+++ E    +EK++ 
Sbjct: 505 AFLREEQDGDKIKIGDLESELKTYRMSLQSEKDKTKELEGRLAEERYQREVVGSKEKQEV 564

Query: 665 Q 665
           Q
Sbjct: 565 Q 565


>YJ9C_YEAST (P47166) Hypothetical 81.2 kDa protein in NMD5-HOM6
           intergenic region
          Length = 707

 Score = 38.1 bits (87), Expect = 0.077
 Identities = 23/93 (24%), Positives = 51/93 (54%), Gaps = 7/93 (7%)

Query: 492 ELISAKNRYE---KKAADYKTAYERAKTDAETANKKLKSAEEKCAKLTEDLAASDLLLQK 548
           ++++ +NR+E   K+  D +  Y+ A   +ET  K+L+  +E  +K   ++   +   + 
Sbjct: 371 KIVNLENRFESTMKEKNDIEEKYQTALRSSETLGKQLEKEKENHSKAVLEVKDLERRAET 430

Query: 549 TKSLKEAINDKHTAIQAKYQ----KLEKKYDRL 577
            KS  ++I+D +  ++ KY+    +LE+K + L
Sbjct: 431 LKSSLQSISDDYNLLKKKYEIQRSQLEQKENEL 463


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.312    0.131    0.378 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,700,377
Number of Sequences: 164201
Number of extensions: 3940993
Number of successful extensions: 15862
Number of sequences better than 10.0: 342
Number of HSP's better than 10.0 without gapping: 109
Number of HSP's successfully gapped in prelim test: 243
Number of HSP's that attempted gapping in prelim test: 14448
Number of HSP's gapped (non-prelim): 1192
length of query: 680
length of database: 59,974,054
effective HSP length: 117
effective length of query: 563
effective length of database: 40,762,537
effective search space: 22949308331
effective search space used: 22949308331
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 69 (31.2 bits)