BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0490.3
(1199 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
POLX_TOBAC (P10978) Retrovirus-related Pol polyprotein from tran... 505 e-142
COPI_DROME (P04146) Copia protein (Gag-int-pol protein) [Contain... 322 5e-87
M810_ARATH (P92519) Hypothetical mitochondrial protein AtMg00810... 238 7e-62
YCH4_YEAST (P25600) Transposon Ty5-1 34.5 kDa hypothetical protein 154 1e-36
YMD9_YEAST (Q03434) Transposon Ty1 protein B 121 1e-26
YMU0_YEAST (Q04670) Transposon Ty1 protein B 119 6e-26
YME4_YEAST (Q04711) Transposon Ty1 protein B 119 6e-26
YJZ9_YEAST (P47100) Transposon Ty1 protein B 119 6e-26
YJZ7_YEAST (P47098) Transposon Ty1 protein B 117 1e-25
YJL3_YEAST (P47024) Transposon Ty4 207.7 kDa hypothetical protein 116 3e-25
YMT5_YEAST (Q04214) Transposon Ty1 protein B 113 3e-24
YCB9_YEAST (P25384) Transposon Ty2 protein B (Ty1-17 protein B) 110 2e-23
M820_ARATH (P92520) Hypothetical mitochondrial protein AtMg00820... 108 7e-23
M240_ARATH (P93290) Hypothetical mitochondrial protein AtMg00240... 75 1e-12
POL_SFV1 (P23074) Pol polyprotein [Contains: Protease (EC 3.4.23... 59 8e-08
POL_FOAMV (P14350) Pol polyprotein [Contains: Reverse transcript... 56 7e-07
POL_SFV3L (P27401) Pol polyprotein [Contains: Protease (EC 3.4.2... 54 3e-06
DZP1_MOUSE (Q9JII5) DAZ-associated protein 1 (Deleted in azoospe... 54 3e-06
DZP1_HUMAN (Q96EP5) DAZ-associated protein 1 (Deleted in azoospe... 54 3e-06
SSGP_VOLCA (P21997) Sulfated surface glycoprotein 185 precursor ... 53 4e-06
>POLX_TOBAC (P10978) Retrovirus-related Pol polyprotein from
transposon TNT 1-94 [Contains: Protease (EC 3.4.23.-);
Reverse transcriptase (EC 2.7.7.49); Endonuclease]
Length = 1328
Score = 505 bits (1301), Expect = e-142
Identities = 351/1065 (32%), Positives = 516/1065 (47%), Gaps = 72/1065 (6%)
Query: 157 MSLTPPDTPWYMDTGASSHTAASQGTLTSYSNLSHLNQKLIVGSGQGIPIQGSGYTSIPT 216
M L+ P++ W +DT AS H + Y K+ G+ I G G I T
Sbjct: 285 MHLSGPESEWVVDTAASHHATPVRDLFCRYVAGDFGTVKM--GNTSYSKIAGIGDICIKT 342
Query: 217 PHK-PLALNHVLHTPRIIKNLISVRQLTTDNNVSVSFDPFGFSVSDFKTGMPLLRCNSLG 275
L L V H P + NLIS L D S F + ++ K + + + + G
Sbjct: 343 NVGCTLVLKDVRHVPDLRMNLISGIALDRDGYESY-FANQKWRLT--KGSLVIAKGVARG 399
Query: 276 DLYPVTR-------SSPFAGLASSVWHNRLGHPASSALNHLRNNKLIFCEPSRSSSVCDS 328
LY ++ ++ +WH R+GH + L L LI + CD
Sbjct: 400 TLYRTNAEICQGELNAAQDEISVDLWHKRMGHMSEKGLQILAKKSLISYAKGTTVKPCDY 459
Query: 329 CVLGKHVRLPFSSSAIITLRPFDILHSDLW-TSPVLSTAGHRYYVLFLDDHTDFLWTFPI 387
C+ GK R+ F +S+ L D+++SD+ + S G++Y+V F+DD + LW + +
Sbjct: 460 CLFGKQHRVSFQTSSERKLNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYIL 519
Query: 388 SKKSQVYETFTTLATLIKTQFSANIKCLQCDNGREYDNDSFHRYCDANGLIFRFSCPHTS 447
K QV++ F L++ + +K L+ DNG EY + F YC ++G+ + P T
Sbjct: 520 KTKDQVFQVFQKFHALVERETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTP 579
Query: 448 SQNGKAERKIRTINNMIRTLLAHSSVPPSFWHHALQMATYLLNILPRKTLQNDSPTQLLY 507
NG AER RTI +R++L + +P SFW A+Q A YL+N P L + P ++
Sbjct: 580 QHNGVAERMNRTIVEKVRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWT 639
Query: 508 HRDPSYSHLRVFGCLCFPLFPSATINKLQPRSTPCVFLGYPMNHRGYKCYDLSHRKILIS 567
+++ SYSHL+VFGC F P KL +S PC+F+GY GY+ +D +K++ S
Sbjct: 640 NKEVSYSHLKVFGCRAFAHVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRS 699
Query: 568 RHVIFDETRF-PFADLSLTPAPSYECFTEDLPPSLIHHWQTVSSRPPDPP---------- 616
R V+F E+ AD+S E + +I ++ T+ S +P
Sbjct: 700 RDVVFRESEVRTAADMS-----------EKVKNGIIPNFVTIPSTSNNPTSAESTTDEVS 748
Query: 617 ---VQPSSPTDSSPPLSALVSPTASPS-------PLPLPPVPPAPPVRTMTTRSMHGISK 666
QP + L V P+ PL P R +T + IS
Sbjct: 749 EQGEQPGEVIEQGEQLDEGVEEVEHPTQGEEQHQPLRRSERPRVESRRYPSTEYVL-ISD 807
Query: 667 PKKPFSLSVSIDDPSISPLPHNPKQALSDPNWKSAMQSEFNALIRSNTWELVPRPCDVNV 726
++P SL + P + L AMQ E +L ++ T++LV P
Sbjct: 808 DREPESLKEVLSHPEKNQL-------------MKAMQEEMESLQKNGTYKLVELPKGKRP 854
Query: 727 IRCMWIFRHKKQSNGLFERYKARLVGDGRSQIAGVDCDETFSPVVKPATIRTVLSIALSR 786
++C W+F+ KK + RYKARLV G Q G+D DE FSPVVK +IRT+LS+A S
Sbjct: 855 LKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASL 914
Query: 787 SWPIHQLDVQNAFLHGDLHETIYMHHPLGFRDPHHPDYVCRLKKSLYGLKQAPRAWYQRF 846
+ QLDV+ AFLHGDL E IYM P GF VC+L KSLYGLKQAPR WY +F
Sbjct: 915 DLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKF 974
Query: 847 ADYVSSIGFRHSTSDHSLFIFR-QGSDIAYILLYVDDIILVASSHDLRKSFMALLASEFA 905
++ S + + SD ++ R ++ +LLYVDD+++V L L+ F
Sbjct: 975 DSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFD 1034
Query: 906 MKDLGPLSYFLGIAVTRH--AGGLFLSQSTYATEIIARAGMASCNPSATPVDTKQKLSSS 963
MKDLGP LG+ + R + L+LSQ Y ++ R M + P +TP+ KLS
Sbjct: 1035 MKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKK 1094
Query: 964 -SGTPCEDAS-----LYRSLDGALQY-LTFTRPDISYAVQQVCLHMHAPHTKHMLALKRV 1016
T E+ Y S G+L Y + TRPDI++AV V + P +H A+K +
Sbjct: 1095 MCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWI 1154
Query: 1017 LRYVRGTLTYGLHLYPSPVETLVSYTDADWGGCPDTRRSTSGYCVFLGDNLISWSSKRQP 1076
LRY+RGT T + L YTDAD G D R+S++GY ISW SK Q
Sbjct: 1155 LRYLRGT-TGDCLCFGGSDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQK 1213
Query: 1077 TLSRSSAEAEYRGVANVVSESCWIRNLLLELHFPLSQATLVHCDNVSAIYLSGNPVHHQR 1136
++ S+ EAEY E W++ L EL + +V+CD+ SAI LS N ++H R
Sbjct: 1214 CVALSTTEAEYIAATETGKEMIWLKRFLQELGLH-QKEYVVYCDSQSAIDLSKNSMYHAR 1272
Query: 1137 TKHIEMDIHFVREKVVRGQARVLHVPSRHQIADIFTKGLPRLLFD 1181
TKHI++ H++RE V +VL + + AD+ TK +PR F+
Sbjct: 1273 TKHIDVRYHWIREMVDDESLKVLKISTNENPADMLTKVVPRNKFE 1317
>COPI_DROME (P04146) Copia protein (Gag-int-pol protein) [Contains:
Copia VLP protein; Copia protease (EC 3.4.23.-)]
Length = 1409
Score = 322 bits (824), Expect = 5e-87
Identities = 182/512 (35%), Positives = 289/512 (55%), Gaps = 19/512 (3%)
Query: 697 NWKSAMQSEFNALIRSNTWELVPRPCDVNVIRCMWIFRHKKQSNGLFERYKARLVGDGRS 756
+W+ A+ +E NA +NTW + RP + N++ W+F K G RYKARLV G +
Sbjct: 905 SWEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFT 964
Query: 757 QIAGVDCDETFSPVVKPATIRTVLSIALSRSWPIHQLDVQNAFLHGDLHETIYMHHPLGF 816
Q +D +ETF+PV + ++ R +LS+ + + +HQ+DV+ AFL+G L E IYM P G
Sbjct: 965 QKYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQGI 1024
Query: 817 RDPHHPDYVCRLKKSLYGLKQAPRAWYQRFADYVSSIGFRHSTSDHSLFIFRQGS--DIA 874
+ D VC+L K++YGLKQA R W++ F + F +S+ D ++I +G+ +
Sbjct: 1025 SC--NSDNVCKLNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENI 1082
Query: 875 YILLYVDDIILVASSHDLRKSFMALLASEFAMKDLGPLSYFLGIAVTRHAGGLFLSQSTY 934
Y+LLYVDD+++ +F L +F M DL + +F+GI + ++LSQS Y
Sbjct: 1083 YVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDKIYLSQSAY 1142
Query: 935 ATEIIARAGMASCNPSATPVDTK---QKLSSSS--GTPCEDASLYRSLDGALQYLTF-TR 988
+I+++ M +CN +TP+ +K + L+S TPC RSL G L Y+ TR
Sbjct: 1143 VKKILSKFNMENCNAVSTPLPSKINYELLNSDEDCNTPC------RSLIGCLMYIMLCTR 1196
Query: 989 PDISYAVQQVCLHMHAPHTKHMLALKRVLRYVRGTLTYGLHLYPSPV--ETLVSYTDADW 1046
PD++ AV + + +++ LKRVLRY++GT+ L + ++ Y D+DW
Sbjct: 1197 PDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDW 1256
Query: 1047 GGCPDTRRSTSGYCVFLGD-NLISWSSKRQPTLSRSSAEAEYRGVANVVSESCWIRNLLL 1105
G R+ST+GY + D NLI W++KRQ +++ SS EAEY + V E+ W++ LL
Sbjct: 1257 AGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLT 1316
Query: 1106 ELHFPLSQATLVHCDNVSAIYLSGNPVHHQRTKHIEMDIHFVREKVVRGQARVLHVPSRH 1165
++ L ++ DN I ++ NP H+R KHI++ HF RE+V + ++P+ +
Sbjct: 1317 SINIKLENPIKIYEDNQGCISIANNPSCHKRAKHIDIKYHFAREQVQNNVICLEYIPTEN 1376
Query: 1166 QIADIFTKGLPRLLFDDFRSSLSVGEPPASTA 1197
Q+ADIFTK LP F + R L + + S A
Sbjct: 1377 QLADIFTKPLPAARFVELRDKLGLLQDDQSNA 1408
Score = 181 bits (458), Expect = 1e-44
Identities = 122/425 (28%), Positives = 208/425 (48%), Gaps = 26/425 (6%)
Query: 168 MDTGASSHTAASQGTLTSYSNLSHLNQKLIVGSGQGIPIQGSGYTSIPTPHKPLALNHVL 227
+D+GAS H + T + + + G+ I G + H+ + L VL
Sbjct: 291 LDSGASDHLINDESLYTDSVEVVPPLKIAVAKQGEFIYATKRGIVRLRNDHE-ITLEDVL 349
Query: 228 HTPRIIKNLISVRQLTTDNNVSVSFDPFGFSVSDFKTGMPLLRCNSLGDLYPVTRSSPFA 287
NL+SV++L + +S+ FD G ++S K G+ +++ + + + PV ++
Sbjct: 350 FCKEAAGNLMSVKRLQ-EAGMSIEFDKSGVTIS--KNGLMVVKNSGMLNNVPVINFQAYS 406
Query: 288 GLASS-----VWHNRLGHPASSALNHLRNNKLIFCEPSR------SSSVCDSCVLGKHVR 336
A +WH R GH + L ++ K +F + S S +C+ C+ GK R
Sbjct: 407 INAKHKNNFRLWHERFGHISDGKLLEIKR-KNMFSDQSLLNNLELSCEICEPCLNGKQAR 465
Query: 337 LPFSSSAIIT--LRPFDILHSDLWTSPV--LSTAGHRYYVLFLDDHTDFLWTFPISKKSQ 392
LPF T RP ++HSD+ P+ ++ Y+V+F+D T + T+ I KS
Sbjct: 466 LPFKQLKDKTHIKRPLFVVHSDV-CGPITPVTLDDKNYFVIFVDQFTHYCVTYLIKYKSD 524
Query: 393 VYETFTTLATLIKTQFSANIKCLQCDNGREYDNDSFHRYCDANGLIFRFSCPHTSSQNGK 452
V+ F + F+ + L DNGREY ++ ++C G+ + + PHT NG
Sbjct: 525 VFSMFQDFVAKSEAHFNLKVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHTPQLNGV 584
Query: 453 AERKIRTINNMIRTLLAHSSVPPSFWHHALQMATYLLNILPRKTLQNDS--PTQLLYHRD 510
+ER IRTI RT+++ + + SFW A+ ATYL+N +P + L + S P ++ +++
Sbjct: 585 SERMIRTITEKARTMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSKTPYEMWHNKK 644
Query: 511 PSYSHLRVFGCLCFPLFPSATINKLQPRSTPCVFLGYPMNHRGYKCYDLSHRKILISRHV 570
P HLRVFG + + K +S +F+GY N G+K +D + K +++R V
Sbjct: 645 PYLKHLRVFGATVYVHIKNKQ-GKFDDKSFKSIFVGYEPN--GFKLWDAVNEKFIVARDV 701
Query: 571 IFDET 575
+ DET
Sbjct: 702 VVDET 706
>M810_ARATH (P92519) Hypothetical mitochondrial protein AtMg00810
(ORF240b)
Length = 240
Score = 238 bits (607), Expect = 7e-62
Identities = 120/225 (53%), Positives = 153/225 (67%), Gaps = 1/225 (0%)
Query: 875 YILLYVDDIILVASSHDLRKSFMALLASEFAMKDLGPLSYFLGIAVTRHAGGLFLSQSTY 934
Y+LLYVDDI+L SS+ L + L+S F+MKDLGP+ YFLGI + H GLFLSQ+ Y
Sbjct: 2 YLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKY 61
Query: 935 ATEIIARAGMASCNPSATPVDTKQKLSSSSGTPCEDASLYRSLDGALQYLTFTRPDISYA 994
A +I+ AGM C P +TP+ K SS S D S +RS+ GALQYLT TRPDISYA
Sbjct: 62 AEQILNNAGMLDCKPMSTPLPLKLN-SSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYA 120
Query: 995 VQQVCLHMHAPHTKHMLALKRVLRYVRGTLTYGLHLYPSPVETLVSYTDADWGGCPDTRR 1054
V VC MH P LKRVLRYV+GT+ +GL+++ + + ++ D+DW GC TRR
Sbjct: 121 VNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRR 180
Query: 1055 STSGYCVFLGDNLISWSSKRQPTLSRSSAEAEYRGVANVVSESCW 1099
ST+G+C FLG N+ISWS+KRQPT+SRSS E EYR +A +E W
Sbjct: 181 STTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>YCH4_YEAST (P25600) Transposon Ty5-1 34.5 kDa hypothetical protein
Length = 308
Score = 154 bits (389), Expect = 1e-36
Identities = 101/308 (32%), Positives = 153/308 (48%), Gaps = 5/308 (1%)
Query: 793 LDVQNAFLHGDLHETIYMHHPLGFRDPHHPDYVCRLKKSLYGLKQAPRAWYQRFADYVSS 852
+DV AFL+ + E IY+ P GF + +PDYV L +YGLKQAP W + + +
Sbjct: 1 MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60
Query: 853 IGFRHSTSDHSLFIFRQGSD-IAYILLYVDDIILVASSHDLRKSFMALLASEFAMKDLGP 911
IGF +H L+ FR SD YI +YVDD+++ A S + L ++MKDLG
Sbjct: 61 IGFCRHEGEHGLY-FRSTSDGPIYIGVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGK 119
Query: 912 LSYFLGIAVTRHAGG-LFLSQSTYATEIIARAGMASCNPSATPVDTKQKLSSSSGTPCED 970
+ FLG+ + + G + LS Y + + + + + + TP+ + L ++ +D
Sbjct: 120 VDKFLGLNIHQSTNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLFETTSPHLKD 179
Query: 971 ASLYRSLDGALQYLTFT-RPDISYAVQQVCLHMHAPHTKHMLALKRVLRYVRGTLTYGLH 1029
+ Y+S+ G L + T RPDISY V + + P H+ + +RVLRY+ T + L
Sbjct: 180 ITPYQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTTRSMCLK 239
Query: 1030 LYPSPVETLVSYTDADWGGCPDTRRSTSGYCVFLGDNLISWSSKR-QPTLSRSSAEAEYR 1088
L Y DA G D ST GY L ++WSSK+ + + S EAEY
Sbjct: 240 YRSGSQVALTVYCDASHGAIHDLPHSTGGYVTLLAGAPVTWSSKKLKGVIPVPSTEAEYI 299
Query: 1089 GVANVVSE 1096
+ V E
Sbjct: 300 TASETVME 307
>YMD9_YEAST (Q03434) Transposon Ty1 protein B
Length = 1328
Score = 121 bits (304), Expect = 1e-26
Identities = 144/559 (25%), Positives = 230/559 (40%), Gaps = 108/559 (19%)
Query: 168 MDTGASSHTAASQGTLTSYSNLSHLNQKLIVGSGQGIPIQGSGYTSIPTPHKPLALNHVL 227
+D+GAS S + S S+ +N ++ + IPI G VL
Sbjct: 33 LDSGASRTLIRSAHHIHSASSNPDIN--VVDAQKRNIPINAIGDLQFHFQDNTKTSIKVL 90
Query: 228 HTPRIIKNLISVRQLTTDNNVSVSFDPFGFSVSDFKTGMPLLRCNSLGDLYPV------- 280
HTP I +L+S+ +L + ++ F SD P+++ GD Y V
Sbjct: 91 HTPNIAYDLLSLNELAAVD-ITACFTKNVLERSDGTVLAPIVK---YGDFYWVSKKYLLP 146
Query: 281 ----------------TRSSPFAGLASSVWHNRLGHPASSALNH-LRNNKLIFCEPS--- 320
TR P+ + H L H + + + L+NN + + S
Sbjct: 147 SNISVPTINNVHTSESTRKYPYPFI-----HRMLAHANAQTIRYSLKNNTITYFNESDVD 201
Query: 321 RSSSV---CDSCVLGK-----HV---RLPFSSSAIITLRPFDILHSDLWTSPV--LSTAG 367
RSS++ C C++GK H+ RL + +S PF LH+D++ PV L +
Sbjct: 202 RSSAIDYQCPDCLIGKSTKHRHIKGSRLKYQNS----YEPFQYLHTDIF-GPVHNLPKSA 256
Query: 368 HRYYVLFLDDHTDFLWTFPIS--KKSQVYETFTTLATLIKTQFSANIKCLQCDNGREYDN 425
Y++ F D+ T F W +P+ ++ + + FTT+ IK QF A++ +Q D G EY N
Sbjct: 257 PSYFISFTDETTKFRWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTN 316
Query: 426 DSFHRYCDANGLIFRFSCPHTSSQNGKAERKIRTINNMIRTLLAHSSVPPSFWHHALQMA 485
+ H++ + NG+ ++ S +G AER RT+ + RT L S +P W A++ +
Sbjct: 317 RTLHKFLEKNGITPCYTTTADSRAHGVAERLNRTLLDDCRTQLQCSGLPNHLWFSAIEFS 376
Query: 486 TYLLNILPRKTLQNDSPTQLLYHRDPSYSHLRVFGCLCFPLFP---SATIN------KLQ 536
T + N L SP + + H + G L P +N K+
Sbjct: 377 TIVRNSLA-------SPKS----KKSARQHAGLAGLDISTLLPFGQPVIVNDHNPNSKIH 425
Query: 537 PRSTPCVFLGYPMNHRGY--------KCYDLSHRKILISRHVIFDETRFPF----ADLSL 584
PR P L N GY K D ++ IL + D+ + DL+
Sbjct: 426 PRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQGKESRLDQFNYDALTFDEDLNR 485
Query: 585 TPAPSYECF--------TEDLPPSLIHHWQTVSSRPPDPP----VQPSSPTDSSPPL--- 629
A SY+ F ++DL H +Q+ P+ P + SPTDS+PP
Sbjct: 486 LTA-SYQSFIASNEIQQSDDLNIESDHDFQSDIELHPEQPRNVLSKAVSPTDSTPPSTHT 544
Query: 630 --SALVSPTASPSPLPLPP 646
S VS T +P + P
Sbjct: 545 EDSKRVSKTNIRAPREVDP 563
Score = 103 bits (258), Expect = 2e-21
Identities = 129/518 (24%), Positives = 213/518 (40%), Gaps = 70/518 (13%)
Query: 701 AMQSEFNALIRSNTW---------ELVPRPCDVNVIRCMWIFRHKKQSNGLFERYKARLV 751
A E N L++ TW E+ P+ VI M+IF K+ +KAR V
Sbjct: 826 AYHKEVNQLLKMKTWDTDEYYDRKEIDPK----RVINSMFIFNKKRDGT-----HKARFV 876
Query: 752 GDGRSQIAGVDCDETFSPVVKPATIRTVLSIALSRSWPIHQLDVQNAFLHGDLHETIYMH 811
G Q S V + T LS+AL ++ I QLD+ +A+L+ D+ E +Y+
Sbjct: 877 ARGDIQHPDTYDSGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIR 936
Query: 812 HPLGFRDPH--HPDYVCRLKKSLYGLKQAPRAWYQRFADY-VSSIGFRHSTSDHSLFIFR 868
P PH D + RLKKSLYGLKQ+ WY+ Y + G +F
Sbjct: 937 PP-----PHLGMNDKLIRLKKSLYGLKQSGANWYETIKSYLIKQCGMEEVRGWSCVF--- 988
Query: 869 QGSDIAYILLYVDDIILVASSHDLRKSFMALLASEFAMK--DLG----PLSY-FLGIAVT 921
+ S + I L+VDD+IL + + K + L ++ K +LG + Y LG+ +
Sbjct: 989 KNSQVT-ICLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIK 1047
Query: 922 RHAGG-LFLSQSTYATEIIARAGMASCNPSATPVDTKQKLSSSSGTP------------- 967
G + L TE I + + P++ K + S+ G P
Sbjct: 1048 YQRGKYMKLGMENSLTEKIPKLNV--------PLNPKGRKLSAPGQPGLYIDQDELEIDE 1099
Query: 968 ---CEDASLYRSLDGALQYLTFT-RPDISYAVQQVCLHMHAPHTKHMLALKRVLRYVRGT 1023
E + L G Y+ + R D+ Y + + H+ P + + +++++ T
Sbjct: 1100 DEYKEKVHEMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDT 1159
Query: 1024 ----LTYGLHLYPSPVETLVSYTDADWGGCPDTRRSTSGYCVFLGDNLISWSSKRQPTLS 1079
L + + P LV+ +DA +G P +S G L +I S +
Sbjct: 1160 RDKQLIWHKNKPTEPDNKLVAISDASYGNQP-YYKSQIGNIYLLNGKVIGGKSTKASLTC 1218
Query: 1080 RSSAEAEYRGVANVVSESCWIRNLLLELH-FPLSQATLVHCDNVSAIYLSGNPVHHQRTK 1138
S+ EAE ++ V + L+ EL+ P+ + L + +I S N R +
Sbjct: 1219 TSTTEAEIHAISESVPLLNNLSYLIQELNKKPIIKGLLTDSRSTISIIKSTNE-EKFRNR 1277
Query: 1139 HIEMDIHFVREKVVRGQARVLHVPSRHQIADIFTKGLP 1176
+R++V V ++ ++ IAD+ TK LP
Sbjct: 1278 FFGTKAMRLRDEVSGNNLYVYYIETKKNIADVMTKPLP 1315
>YMU0_YEAST (Q04670) Transposon Ty1 protein B
Length = 1328
Score = 119 bits (297), Expect = 6e-26
Identities = 143/559 (25%), Positives = 229/559 (40%), Gaps = 108/559 (19%)
Query: 168 MDTGASSHTAASQGTLTSYSNLSHLNQKLIVGSGQGIPIQGSGYTSIPTPHKPLALNHVL 227
+D+GAS S + S S+ +N ++ + IPI G VL
Sbjct: 33 LDSGASRTLIRSAHHIHSASSNPDIN--VVDAQKRNIPINAIGDLQFHFQDNTKTSIKVL 90
Query: 228 HTPRIIKNLISVRQLTTDNNVSVSFDPFGFSVSDFKTGMPLLRCNSLGDLYPV------- 280
HTP I +L+S+ +L + ++ F SD P+++ GD Y V
Sbjct: 91 HTPNIAYDLLSLNELAAVD-ITACFTKNVLERSDGTVLAPIVK---YGDFYWVSKKYLLP 146
Query: 281 ----------------TRSSPFAGLASSVWHNRLGHPASSALNH-LRNNKLIFCEPSR-- 321
TR P+ + H L H + + + L+NN + + S
Sbjct: 147 SNISVPTINNVHTSESTRKYPYPFI-----HRMLAHANAQTIRYSLKNNTITYFNESDVD 201
Query: 322 -SSSV---CDSCVLGK-----HV---RLPFSSSAIITLRPFDILHSDLWTSPV--LSTAG 367
SS++ C C++GK H+ RL + +S PF LH+D++ PV L +
Sbjct: 202 WSSAIDYQCPDCLIGKSTKHRHIKGSRLKYQNS----YEPFQYLHTDIF-GPVHNLPKSA 256
Query: 368 HRYYVLFLDDHTDFLWTFPIS--KKSQVYETFTTLATLIKTQFSANIKCLQCDNGREYDN 425
Y++ F D+ T F W +P+ ++ + + FTT+ IK QF A++ +Q D G EY N
Sbjct: 257 PSYFISFTDETTKFRWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTN 316
Query: 426 DSFHRYCDANGLIFRFSCPHTSSQNGKAERKIRTINNMIRTLLAHSSVPPSFWHHALQMA 485
+ H++ + NG+ ++ S +G AER RT+ + RT L S +P W A++ +
Sbjct: 317 RTLHKFLEKNGITPCYTTTADSRAHGVAERLNRTLLDDCRTQLQCSGLPNHLWFSAIEFS 376
Query: 486 TYLLNILPRKTLQNDSPTQLLYHRDPSYSHLRVFGCLCFPLFP---SATIN------KLQ 536
T + N L SP + + H + G L P +N K+
Sbjct: 377 TIVRNSLA-------SPKS----KKSARQHAGLAGLDISTLLPFGQPVIVNDHNPNSKIH 425
Query: 537 PRSTPCVFLGYPMNHRGY--------KCYDLSHRKILISRHVIFDETRFPF----ADLSL 584
PR P L N GY K D ++ IL + D+ + DL+
Sbjct: 426 PRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQGKESRLDQFNYDALTFDEDLNR 485
Query: 585 TPAPSYECF--------TEDLPPSLIHHWQTVSSRPPDPP----VQPSSPTDSSPPL--- 629
A SY+ F ++DL H +Q+ P+ P + SPTDS+PP
Sbjct: 486 LTA-SYQSFIASNEIQQSDDLNIESDHDFQSDIELHPEQPRNVLSKAVSPTDSTPPSTHT 544
Query: 630 --SALVSPTASPSPLPLPP 646
S VS T +P + P
Sbjct: 545 EDSKRVSKTNIRAPREVDP 563
Score = 110 bits (275), Expect = 2e-23
Identities = 130/523 (24%), Positives = 222/523 (41%), Gaps = 80/523 (15%)
Query: 701 AMQSEFNALIRSNTW---------ELVPRPCDVNVIRCMWIFRHKKQSNGLFERYKARLV 751
A E N L++ TW E+ P+ VI M+IF K+ +KAR V
Sbjct: 826 AYHKEVNQLLKMKTWDTDRYYDRKEIDPK----RVINSMFIFNRKRDGT-----HKARFV 876
Query: 752 GDGRSQIAGVDCDETFSPVVKPATIR-----TVLSIALSRSWPIHQLDVQNAFLHGDLHE 806
G + +T+ P ++ T+ T LS+AL ++ I QLD+ +A+L+ D+ E
Sbjct: 877 ARG-----DIQHPDTYDPGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKE 931
Query: 807 TIYMHHPLGFRDPH--HPDYVCRLKKSLYGLKQAPRAWYQRFADY-VSSIGFRHSTSDHS 863
+Y+ P PH D + RLKKSLYGLKQ+ WY+ Y + G
Sbjct: 932 ELYIRPP-----PHLGMNDKLIRLKKSLYGLKQSGANWYETIKSYLIKQCGMEEVRGWSC 986
Query: 864 LFIFRQGSDIAYILLYVDDIILVASSHDLRKSFMALLASEFAMK--DLG----PLSY-FL 916
+F + S + I L+VDD+IL + + K + L ++ K +LG + Y L
Sbjct: 987 VF---KNSQVT-ICLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDIL 1042
Query: 917 GIAVTRHAGG-LFLSQSTYATEIIARAGMASCNPSATPVDTKQKLSSSSGTPC------- 968
G+ + G + L TE I + + P++ K + S+ G P
Sbjct: 1043 GLEIKYQRGKYMKLGMENSLTEKIPKLNV--------PLNPKGRKLSAPGQPGLYIDQQE 1094
Query: 969 -----EDASL----YRSLDGALQYLTFT-RPDISYAVQQVCLHMHAPHTKHMLALKRVLR 1018
+D + + L G Y+ + R D+ Y + + H+ P + + +++
Sbjct: 1095 LELEEDDYKMKVHEMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSKQVLDMTYELIQ 1154
Query: 1019 YVRGTLTYGLHLYPS----PVETLVSYTDADWGGCPDTRRSTSGYCVFLGDNLISWSSKR 1074
++ T L + S P LV +DA +G P +S G L +I S +
Sbjct: 1155 FIWNTRDKQLIWHKSKPVKPTNKLVVISDASYGNQP-YYKSQIGNIYLLNGKVIGGKSTK 1213
Query: 1075 QPTLSRSSAEAEYRGVANVVSESCWIRNLLLELH-FPLSQATLVHCDNVSAIYLSGNPVH 1133
S+ EAE ++ V + +L+ EL+ P+++ L + +I +S N
Sbjct: 1214 ASLTCTSTTEAEIHAISESVPLLNNLSHLVQELNKKPITKGLLTDSKSTISIIISNNE-E 1272
Query: 1134 HQRTKHIEMDIHFVREKVVRGQARVLHVPSRHQIADIFTKGLP 1176
R + +R++V V ++ ++ IAD+ TK LP
Sbjct: 1273 KFRNRFFGTKAMRLRDEVSGNHLHVCYIETKKNIADVMTKPLP 1315
>YME4_YEAST (Q04711) Transposon Ty1 protein B
Length = 1328
Score = 119 bits (297), Expect = 6e-26
Identities = 143/559 (25%), Positives = 229/559 (40%), Gaps = 108/559 (19%)
Query: 168 MDTGASSHTAASQGTLTSYSNLSHLNQKLIVGSGQGIPIQGSGYTSIPTPHKPLALNHVL 227
+D+GAS S + S S+ +N ++ + IPI G VL
Sbjct: 33 LDSGASRTLIRSAHHIHSASSNPDIN--VVDAQKRNIPINAIGDLQFHFQDNTKTSIKVL 90
Query: 228 HTPRIIKNLISVRQLTTDNNVSVSFDPFGFSVSDFKTGMPLLRCNSLGDLYPV------- 280
HTP I +L+S+ +L + ++ F SD P+++ GD Y V
Sbjct: 91 HTPNIAYDLLSLNELAAVD-ITACFTKNVLERSDGTVLAPIVK---YGDFYWVSKKYLLP 146
Query: 281 ----------------TRSSPFAGLASSVWHNRLGHPASSALNH-LRNNKLIFCEPSR-- 321
TR P+ + H L H + + + L+NN + + S
Sbjct: 147 SNISVPTINNVHTSESTRKYPYPFI-----HRMLAHANAQTIRYSLKNNTITYFNESDVD 201
Query: 322 -SSSV---CDSCVLGK-----HV---RLPFSSSAIITLRPFDILHSDLWTSPV--LSTAG 367
SS++ C C++GK H+ RL + +S PF LH+D++ PV L +
Sbjct: 202 WSSAIDYQCPDCLIGKSTKHRHIKGSRLKYQNS----YEPFQYLHTDIF-GPVHNLPKSA 256
Query: 368 HRYYVLFLDDHTDFLWTFPIS--KKSQVYETFTTLATLIKTQFSANIKCLQCDNGREYDN 425
Y++ F D+ T F W +P+ ++ + + FTT+ IK QF A++ +Q D G EY N
Sbjct: 257 PSYFISFTDETTKFRWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTN 316
Query: 426 DSFHRYCDANGLIFRFSCPHTSSQNGKAERKIRTINNMIRTLLAHSSVPPSFWHHALQMA 485
+ H++ + NG+ ++ S +G AER RT+ + RT L S +P W A++ +
Sbjct: 317 RTLHKFLEKNGITPCYTTTADSRAHGVAERLNRTLLDDCRTQLQCSGLPNHLWFSAIEFS 376
Query: 486 TYLLNILPRKTLQNDSPTQLLYHRDPSYSHLRVFGCLCFPLFP---SATIN------KLQ 536
T + N L SP + + H + G L P +N K+
Sbjct: 377 TIVRNSLA-------SPKS----KKSARQHAGLAGLDISTLLPFGQPVIVNDHNPNSKIH 425
Query: 537 PRSTPCVFLGYPMNHRGY--------KCYDLSHRKILISRHVIFDETRFPF----ADLSL 584
PR P L N GY K D ++ IL + D+ + DL+
Sbjct: 426 PRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQGKESRLDQFNYDALTFDEDLNR 485
Query: 585 TPAPSYECF--------TEDLPPSLIHHWQTVSSRPPDPP----VQPSSPTDSSPPL--- 629
A SY+ F ++DL H +Q+ P+ P + SPTDS+PP
Sbjct: 486 LTA-SYQSFIASNEIQQSDDLNIESDHDFQSDIELHPEQPRNVLSKAVSPTDSTPPSTHT 544
Query: 630 --SALVSPTASPSPLPLPP 646
S VS T +P + P
Sbjct: 545 EDSKRVSKTNIRAPREVDP 563
Score = 112 bits (279), Expect = 8e-24
Identities = 130/518 (25%), Positives = 217/518 (41%), Gaps = 70/518 (13%)
Query: 701 AMQSEFNALIRSNTW---------ELVPRPCDVNVIRCMWIFRHKKQSNGLFERYKARLV 751
A E N L++ NTW E+ P+ VI M+IF K+ +KAR V
Sbjct: 826 AYHKEVNQLLKMNTWDTDKYYDRKEIDPK----RVINSMFIFNRKRDGT-----HKARFV 876
Query: 752 GDGRSQIAGVDCDETFSPVVKPATIRTVLSIALSRSWPIHQLDVQNAFLHGDLHETIYMH 811
G Q S V + T LS+AL ++ I QLD+ +A+L+ D+ E +Y+
Sbjct: 877 ARGDIQHPDTYDSGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIR 936
Query: 812 HPLGFRDPH--HPDYVCRLKKSLYGLKQAPRAWYQRFADY-VSSIGFRHSTSDHSLFIFR 868
P PH D + RLKKSLYGLKQ+ WY+ Y + G +F
Sbjct: 937 PP-----PHLGMNDKLIRLKKSLYGLKQSGANWYETIKSYLIKQCGMEEVRGWSCVF--- 988
Query: 869 QGSDIAYILLYVDDIILVASSHDLRKSFMALLASEFAMK--DLG----PLSY-FLGIAVT 921
+ S + I L+VDD+IL + + K + L ++ K +LG + Y LG+ +
Sbjct: 989 KNSQVT-ICLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIK 1047
Query: 922 RHAGG-LFLSQSTYATEIIARAGMASCNPSATPVDTKQKLSSSSGTP------------- 967
G + L TE I + + P++ K + S+ G P
Sbjct: 1048 YQRGKYMKLGMENSLTEKIPKLNV--------PLNPKGRKLSAPGQPGLYIDQDELEIDE 1099
Query: 968 ---CEDASLYRSLDGALQYLTFT-RPDISYAVQQVCLHMHAPHTKHMLALKRVLRYVRGT 1023
E + L G Y+ + R D+ Y + + H+ P + + +++++ T
Sbjct: 1100 DEYKEKVHEMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDT 1159
Query: 1024 ----LTYGLHLYPSPVETLVSYTDADWGGCPDTRRSTSGYCVFLGDNLISWSSKRQPTLS 1079
L + + P LV+ +DA +G P +S G L +I S +
Sbjct: 1160 RDKQLIWHKNKPTEPDNKLVAISDASYGNQP-YYKSQIGNIYLLNGKVIGGKSTKASLTC 1218
Query: 1080 RSSAEAEYRGVANVVSESCWIRNLLLELH-FPLSQATLVHCDNVSAIYLSGNPVHHQRTK 1138
S+ EAE ++ V + +L+ EL+ P+++ L + +I +S N R +
Sbjct: 1219 TSTTEAEIHAISESVPLLNNLSHLVQELNKKPITKGLLTDSKSTISIIISNNE-EKFRNR 1277
Query: 1139 HIEMDIHFVREKVVRGQARVLHVPSRHQIADIFTKGLP 1176
+R++V V ++ ++ IAD+ TK LP
Sbjct: 1278 FFGTKAMRLRDEVSGNHLHVCYIETKKNIADVMTKPLP 1315
>YJZ9_YEAST (P47100) Transposon Ty1 protein B
Length = 1755
Score = 119 bits (297), Expect = 6e-26
Identities = 143/559 (25%), Positives = 229/559 (40%), Gaps = 108/559 (19%)
Query: 168 MDTGASSHTAASQGTLTSYSNLSHLNQKLIVGSGQGIPIQGSGYTSIPTPHKPLALNHVL 227
+D+GAS S + S S+ +N ++ + IPI G VL
Sbjct: 460 LDSGASRTLIRSAHHIHSASSNPDIN--VVDAQKRNIPINAIGDLQFHFQDNTKTSIKVL 517
Query: 228 HTPRIIKNLISVRQLTTDNNVSVSFDPFGFSVSDFKTGMPLLRCNSLGDLYPV------- 280
HTP I +L+S+ +L + ++ F SD P+++ GD Y V
Sbjct: 518 HTPNIAYDLLSLNELAAVD-ITACFTKNVLERSDGTVLAPIVK---YGDFYWVSKKYLLP 573
Query: 281 ----------------TRSSPFAGLASSVWHNRLGHPASSALNH-LRNNKLIFCEPSR-- 321
TR P+ + H L H + + + L+NN + + S
Sbjct: 574 SNISVPTINNVHTSESTRKYPYPFI-----HRMLAHANAQTIRYSLKNNTITYFNESDVD 628
Query: 322 -SSSV---CDSCVLGK-----HV---RLPFSSSAIITLRPFDILHSDLWTSPV--LSTAG 367
SS++ C C++GK H+ RL + +S PF LH+D++ PV L +
Sbjct: 629 WSSAIDYQCPDCLIGKSTKHRHIKGSRLKYQNS----YEPFQYLHTDIF-GPVHNLPKSA 683
Query: 368 HRYYVLFLDDHTDFLWTFPIS--KKSQVYETFTTLATLIKTQFSANIKCLQCDNGREYDN 425
Y++ F D+ T F W +P+ ++ + + FTT+ IK QF A++ +Q D G EY N
Sbjct: 684 PSYFISFTDETTKFRWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTN 743
Query: 426 DSFHRYCDANGLIFRFSCPHTSSQNGKAERKIRTINNMIRTLLAHSSVPPSFWHHALQMA 485
+ H++ + NG+ ++ S +G AER RT+ + RT L S +P W A++ +
Sbjct: 744 RTLHKFLEKNGITPCYTTTADSRAHGVAERLNRTLLDDCRTQLQCSGLPNHLWFSAIEFS 803
Query: 486 TYLLNILPRKTLQNDSPTQLLYHRDPSYSHLRVFGCLCFPLFP---SATIN------KLQ 536
T + N L SP + + H + G L P +N K+
Sbjct: 804 TIVRNSLA-------SPKS----KKSARQHAGLAGLDISTLLPFGQPVIVNDHNPNSKIH 852
Query: 537 PRSTPCVFLGYPMNHRGY--------KCYDLSHRKILISRHVIFDETRFPF----ADLSL 584
PR P L N GY K D ++ IL + D+ + DL+
Sbjct: 853 PRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQGKESRLDQFNYDALTFDEDLNR 912
Query: 585 TPAPSYECF--------TEDLPPSLIHHWQTVSSRPPDPP----VQPSSPTDSSPPL--- 629
A SY+ F ++DL H +Q+ P+ P + SPTDS+PP
Sbjct: 913 LTA-SYQSFIASNEIQQSDDLNIESDHDFQSDIELHPEQPRNVLSKAVSPTDSTPPSTHT 971
Query: 630 --SALVSPTASPSPLPLPP 646
S VS T +P + P
Sbjct: 972 EDSKRVSKTNIRAPREVDP 990
Score = 106 bits (264), Expect = 4e-22
Identities = 129/518 (24%), Positives = 216/518 (40%), Gaps = 70/518 (13%)
Query: 701 AMQSEFNALIRSNTW---------ELVPRPCDVNVIRCMWIFRHKKQSNGLFERYKARLV 751
A E N L++ TW E+ P+ VI M+IF K+ +KAR V
Sbjct: 1253 AYHKEVNQLLKMKTWDTDEYYDRKEIDPK----RVINSMFIFNKKRDGT-----HKARFV 1303
Query: 752 GDGRSQIAGVDCDETFSPVVKPATIRTVLSIALSRSWPIHQLDVQNAFLHGDLHETIYMH 811
G Q S V + T LS+AL ++ I QLD+ +A+L+ D+ E +Y+
Sbjct: 1304 ARGDIQHPDTYDSGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIR 1363
Query: 812 HPLGFRDPH--HPDYVCRLKKSLYGLKQAPRAWYQRFADY-VSSIGFRHSTSDHSLFIFR 868
P PH D + RLKKSLYGLKQ+ WY+ Y + G +F
Sbjct: 1364 PP-----PHLGMNDKLIRLKKSLYGLKQSGANWYETIKSYLIQQCGMEEVRGWSCVF--- 1415
Query: 869 QGSDIAYILLYVDDIILVASSHDLRKSFMALLASEFAMK--DLG----PLSY-FLGIAVT 921
+ S + I L+VDD++L + + + K + L ++ K +LG + Y LG+ +
Sbjct: 1416 KNSQVT-ICLFVDDMVLFSKNLNSNKRIIEKLKMQYDTKIINLGESDEEIQYDILGLEIK 1474
Query: 922 RHAGG-LFLSQSTYATEIIARAGMASCNPSATPVDTKQKLSSSSGTPC------------ 968
G + L TE I + + P++ K + S+ G P
Sbjct: 1475 YQRGKYMKLGMENSLTEKIPKLNV--------PLNPKGRKLSAPGQPGLYIDQQELELEE 1526
Query: 969 EDASL----YRSLDGALQYLTFT-RPDISYAVQQVCLHMHAPHTKHMLALKRVLRYVRGT 1023
+D + + L G Y+ + R D+ Y + + H+ P + + +++++ T
Sbjct: 1527 DDYKMKVHEMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSKQVLDMTYELIQFIWNT 1586
Query: 1024 LTYGLHLYPS----PVETLVSYTDADWGGCPDTRRSTSGYCVFLGDNLISWSSKRQPTLS 1079
L + S P LV +DA +G P +S G L +I S +
Sbjct: 1587 RDKQLIWHKSKPVKPTNKLVVISDASYGNQP-YYKSQIGNIYLLNGKVIGGKSTKASLTC 1645
Query: 1080 RSSAEAEYRGVANVVSESCWIRNLLLEL-HFPLSQATLVHCDNVSAIYLSGNPVHHQRTK 1138
S+ EAE ++ V + L+ EL P+++ L + +I +S N R +
Sbjct: 1646 TSTTEAEIHAISESVPLLNNLSYLIQELDKKPITKGLLTDSKSTISIIISNNE-EKFRNR 1704
Query: 1139 HIEMDIHFVREKVVRGQARVLHVPSRHQIADIFTKGLP 1176
+R++V V ++ ++ IAD+ TK LP
Sbjct: 1705 FFGTKAMRLRDEVSGNHLHVCYIETKKNIADVMTKPLP 1742
>YJZ7_YEAST (P47098) Transposon Ty1 protein B
Length = 1755
Score = 117 bits (294), Expect = 1e-25
Identities = 143/559 (25%), Positives = 226/559 (39%), Gaps = 108/559 (19%)
Query: 168 MDTGASSHTAASQGTLTSYSNLSHLNQKLIVGSGQGIPIQGSGYTSIPTPHKPLALNHVL 227
+D+GAS S + S S+ +N ++ + IPI G VL
Sbjct: 460 LDSGASRTLIRSAHHIHSASSNPDIN--VVDAQKRNIPINAIGDLQFHFQDNTKTSIKVL 517
Query: 228 HTPRIIKNLISVRQLTTDNNVSVSFDPFGFSVSDFKTGMPLLRCNSLGDLYPV------- 280
HTP I +L+S+ +L + + F +V + G L GD Y V
Sbjct: 518 HTPNIAYDLLSLNELAAVDITAC----FTKNVLERSDGTVLAPIVQYGDFYWVSKRYLLP 573
Query: 281 ----------------TRSSPFAGLASSVWHNRLGHPASSALNH-LRNNKLIFCEPSR-- 321
TR P+ + H L H + + + L+NN + + S
Sbjct: 574 SNISVPTINNVHTSESTRKYPYPFI-----HRMLAHANAQTIRYSLKNNTITYFNESDVD 628
Query: 322 -SSSV---CDSCVLGK-----HV---RLPFSSSAIITLRPFDILHSDLWTSPV--LSTAG 367
SS++ C C++GK H+ RL + +S PF LH+D++ PV L +
Sbjct: 629 WSSAIDYQCPDCLIGKSTKHRHIKGSRLKYQNS----YEPFQYLHTDIF-GPVHNLPKSA 683
Query: 368 HRYYVLFLDDHTDFLWTFPIS--KKSQVYETFTTLATLIKTQFSANIKCLQCDNGREYDN 425
Y++ F D+ T F W +P+ ++ + + FTT+ IK QF A++ +Q D G EY N
Sbjct: 684 PSYFISFTDETTKFRWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTN 743
Query: 426 DSFHRYCDANGLIFRFSCPHTSSQNGKAERKIRTINNMIRTLLAHSSVPPSFWHHALQMA 485
+ H++ + NG+ ++ S +G AER RT+ + RT L S +P W A++ +
Sbjct: 744 RTLHKFLEKNGITPCYTTTADSRAHGVAERLNRTLLDDCRTQLQCSGLPNHLWFSAIEFS 803
Query: 486 TYLLNILPRKTLQNDSPTQLLYHRDPSYSHLRVFGCLCFPLFP---SATIN------KLQ 536
T + N L SP + + H + G L P +N K+
Sbjct: 804 TIVRNSLA-------SPKS----KKSARQHAGLAGLDISTLLPFGQPVIVNDHNPNSKIH 852
Query: 537 PRSTPCVFLGYPMNHRGY--------KCYDLSHRKILISRHVIFDETRFPF----ADLSL 584
PR P L N GY K D ++ IL + D+ + DL+
Sbjct: 853 PRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQGKESRLDQFNYDALTFDEDLNR 912
Query: 585 TPAPSYECF--------TEDLPPSLIHHWQTVSSRPPDPP----VQPSSPTDSSPPL--- 629
A SY+ F + DL H +Q+ P+ P + SPTDS+PP
Sbjct: 913 LTA-SYQSFIASNEIQESNDLNIESDHDFQSDIELHPEQPRNVLSKAVSPTDSTPPSTHT 971
Query: 630 --SALVSPTASPSPLPLPP 646
S VS T +P + P
Sbjct: 972 EDSKRVSKTNIRAPREVDP 990
Score = 100 bits (250), Expect = 2e-20
Identities = 128/518 (24%), Positives = 212/518 (40%), Gaps = 70/518 (13%)
Query: 701 AMQSEFNALIRSNTW---------ELVPRPCDVNVIRCMWIFRHKKQSNGLFERYKARLV 751
A E N L++ TW E+ P+ VI M+IF K+ +KAR V
Sbjct: 1253 AYHKEVNQLLKMKTWDTDEYYDRKEIDPK----RVINSMFIFNKKRDGT-----HKARFV 1303
Query: 752 GDGRSQIAGVDCDETFSPVVKPATIRTVLSIALSRSWPIHQLDVQNAFLHGDLHETIYMH 811
G Q S V + T LS+AL ++ I QLD+ +A+L+ D+ E +Y+
Sbjct: 1304 ARGDIQHPDTYDTGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIR 1363
Query: 812 HPLGFRDPH--HPDYVCRLKKSLYGLKQAPRAWYQRFADY-VSSIGFRHSTSDHSLFIFR 868
P PH D + RLKKS YGLKQ+ WY+ Y + G +F
Sbjct: 1364 PP-----PHLGMNDKLIRLKKSHYGLKQSGANWYETIKSYLIKQCGMEEVRGWSCVF--- 1415
Query: 869 QGSDIAYILLYVDDIILVASSHDLRKSFMALLASEFAMK--DLG----PLSY-FLGIAVT 921
+ S + I L+VDD+IL + + K + L ++ K +LG + Y LG+ +
Sbjct: 1416 KNSQVT-ICLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIK 1474
Query: 922 RHAGG-LFLSQSTYATEIIARAGMASCNPSATPVDTKQKLSSSSGTP------------- 967
G + L TE I + + P++ K + S+ G P
Sbjct: 1475 YQRGKYMKLGMENSLTEKIPKLNV--------PLNPKGRKLSAPGQPGLYIDQDELEIDE 1526
Query: 968 ---CEDASLYRSLDGALQYLTFT-RPDISYAVQQVCLHMHAPHTKHMLALKRVLRYVRGT 1023
E + L G Y+ + R D+ Y + + H+ P + + +++++ T
Sbjct: 1527 DEYKEKVHEMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDT 1586
Query: 1024 ----LTYGLHLYPSPVETLVSYTDADWGGCPDTRRSTSGYCVFLGDNLISWSSKRQPTLS 1079
L + + P LV+ +DA +G P +S G L +I S +
Sbjct: 1587 RDKQLIWHKNKPTEPDNKLVAISDASYGNQP-YYKSQIGNIFLLNGKVIGGKSTKASLTC 1645
Query: 1080 RSSAEAEYRGVANVVSESCWIRNLLLELH-FPLSQATLVHCDNVSAIYLSGNPVHHQRTK 1138
S+ EAE ++ V + L+ EL+ P+ + L + +I S N R +
Sbjct: 1646 TSTTEAEIHAISESVPLLNNLSYLIQELNKKPIIKGLLTDSRSTISIIKSTNE-EKFRNR 1704
Query: 1139 HIEMDIHFVREKVVRGQARVLHVPSRHQIADIFTKGLP 1176
+R++V V ++ ++ IAD+ TK LP
Sbjct: 1705 FFGTKAMRLRDEVSGNNLYVYYIETKKNIADVMTKPLP 1742
>YJL3_YEAST (P47024) Transposon Ty4 207.7 kDa hypothetical protein
Length = 1803
Score = 116 bits (291), Expect = 3e-25
Identities = 113/461 (24%), Positives = 208/461 (44%), Gaps = 41/461 (8%)
Query: 737 KQSNGLFERYKARLVGDGRSQIAGVDCDETFSPVVKPAT----IRTVLSIALSRSWPIHQ 792
K+ NG+ YKAR+V G +Q +T+S + + I+ L IA +R+ +
Sbjct: 1331 KKRNGI---YKARIVCRGDTQ-----SPDTYSVITTESLNHNHIKIFLMIANNRNMFMKT 1382
Query: 793 LDVQNAFLHGDLHETIYMHHPLGFRDPHHPDYVCRLKKSLYGLKQAPRAWYQRFADYVSS 852
LD+ +AFL+ L E IY+ HP H V +L K+LYGLKQ+P+ W Y++
Sbjct: 1383 LDINHAFLYAKLEEEIYIPHP------HDRRCVVKLNKALYGLKQSPKEWNDHLRQYLNG 1436
Query: 853 IGFRHSTSDHSLFIFRQGSDIAYILLYVDDIILVASSHDLRKSFMALLASEFAMKDLGPL 912
IG + ++ ++ +++ I +YVDD ++ AS+ F+ L S F +K G L
Sbjct: 1437 IGLKDNS--YTPGLYQTEDKNLMIAVYVDDCVIAASNEQRLDEFINKLKSNFELKITGTL 1494
Query: 913 ------SYFLG--IAVTRHAGGLFLSQSTYATEIIARAG--MASCNPSATP------VDT 956
+ LG + + G + L+ ++ + + + S+ P +D
Sbjct: 1495 IDDVLDTDILGMDLVYNKRLGTIDLTLKSFINRMDKKYNEELKKIRKSSIPHMSTYKIDP 1554
Query: 957 KQKLSSSSGTPCEDASL-YRSLDGALQYLTF-TRPDISYAVQQVCLHMHAPHTKHMLALK 1014
K+ + S L + L G L Y+ R DI +AV++V ++ PH + +
Sbjct: 1555 KKDVLQMSEEEFRQGVLKLQQLLGELNYVRHKCRYDIEFAVKKVARLVNYPHERVFYMIY 1614
Query: 1015 RVLRYVRGTLTYGLHLYP--SPVETLVSYTDADWGGCPDTRRSTSGYCVFLGDNLISWSS 1072
++++Y+ G+H + + +++ TDA G D +S G ++ G N+ + S
Sbjct: 1615 KIIQYLVRYKDIGIHYDRDCNKDKKVIAITDASVGSEYDA-QSRIGVILWYGMNIFNVYS 1673
Query: 1073 KRQPTLSRSSAEAEYRGVANVVSESCWIRNLLLELHFPLSQATLVHCDNVSAIYLSGNPV 1132
+ SS EAE + ++S ++ L EL + ++ D+ AI
Sbjct: 1674 NKSTNRCVSSTEAELHAIYEGYADSETLKVTLKELGEGDNNDIVMITDSKPAIQGLNRSY 1733
Query: 1133 HHQRTKHIEMDIHFVREKVVRGQARVLHVPSRHQIADIFTK 1173
+ K + ++EK+ ++L + + IAD+ TK
Sbjct: 1734 QQPKEKFTWIKTEIIKEKIKEKSIKLLKITGKGNIADLLTK 1774
Score = 77.0 bits (188), Expect = 3e-13
Identities = 103/444 (23%), Positives = 170/444 (38%), Gaps = 57/444 (12%)
Query: 168 MDTGASSHTAASQGTLTSYSNLSHLNQKLIVGSGQGIPIQGSGYTSIPTPHKPLALNHVL 227
+DTG+ + + L +Y + + + +G + ++G GY I H +L
Sbjct: 414 IDTGSGVNITNDKTLLHNYEDSNRSTRFFGIGKNSSVSVKGYGYIKIKNGHNNTDNKCLL 473
Query: 228 --HTPRIIKNLISVRQLTTDNNVSVS--FDPFGFSVSDFKT----GMPLLRCNSLGD--- 276
+ P +IS L + +S + G + KT G+ ++ N L +
Sbjct: 474 TYYVPEEESTIISCYDLAKKTKMVLSRKYTRLGNKIIKIKTKIVNGVIHVKMNELIERPS 533
Query: 277 ------LYPVTRSSPFAGLASSVW----HNRLGHPASSAL------NHLRNNKLIFCEPS 320
T S F S+ H R+GH + NH + + EP+
Sbjct: 534 DDSKINAIKPTSSPGFKLNKRSITLEDAHKRMGHTGIQQIENSIKHNHYEESLDLIKEPN 593
Query: 321 RSSSVCDSCVLGKHVRLPFSSSAIITLRPFDILHSDLWT----SPVLSTAGH--RYYVLF 374
C +C + K + + ++ D W PV S+ RY ++
Sbjct: 594 EFW--CQTCKISKATKRNHYTGSMNN-HSTDHEPGSSWCMDIFGPVSSSNADTKRYMLIM 650
Query: 375 LDDHTDFLWTFPISKKSQVYETFTTLATL------IKTQFSANIKCLQCDNGREYDNDSF 428
+D++T + T K+ T LA + ++TQF ++ + D G E+ ND
Sbjct: 651 VDNNTRYCMTSTHFNKNAE----TILAQVRKNIQYVETQFDRKVREINSDRGTEFTNDQI 706
Query: 429 HRYCDANGLIFRFSCPHTSSQNGKAERKIRTINNMIRTLLAHSSVPPSFWHHALQMATYL 488
Y + G+ + + NG+AER IRTI TLL S++ FW +A+ AT +
Sbjct: 707 EEYFISKGIHHILTSTQDHAANGRAERYIRTIITDATTLLRQSNLRVKFWEYAVTSATNI 766
Query: 489 LNILPRKTLQNDSPTQLLYHRDPSYSHLRVFGCLCFPLFPSATI-----NKLQPRSTPCV 543
N L K+ P + + R P L F P I KL+P P +
Sbjct: 767 RNYLEHKS-TGKLPLKAI-SRQPVTVRLMSF----LPFGEKGIIWNHNHKKLKPSGLPSI 820
Query: 544 FLGYPMNHRGYKCYDLSHRKILIS 567
L N GYK + S KI+ S
Sbjct: 821 ILCKDPNSYGYKFFIPSKNKIVTS 844
>YMT5_YEAST (Q04214) Transposon Ty1 protein B
Length = 1328
Score = 113 bits (283), Expect = 3e-24
Identities = 142/559 (25%), Positives = 226/559 (40%), Gaps = 108/559 (19%)
Query: 168 MDTGASSHTAASQGTLTSYSNLSHLNQKLIVGSGQGIPIQGSGYTSIPTPHKPLALNHVL 227
+D+GAS S + S S+ +N ++ + IPI G VL
Sbjct: 33 LDSGASRTLIRSAHHIHSASSNPDIN--VVDAQKRNIPINAIGDLQFHFQDNTKTSIKVL 90
Query: 228 HTPRIIKNLISVRQLTTDNNVSVSFDPFGFSVSDFKTGMPLLRCNSLGDLYPV------- 280
HTP I +L+S+ +L + ++ F SD P+++ GD Y V
Sbjct: 91 HTPNIAYDLLSLNELAAVD-ITACFTKNVLERSDGTVLAPIVK---YGDFYWVSKKYLLP 146
Query: 281 ----------------TRSSPFAGLASSVWHNRLGHPASSALNH-LRNNKLIFCEPSR-- 321
TR P+ + H L H + + + L+NN + + S
Sbjct: 147 SNISVPTINNVHTSESTRKYPYPFI-----HRMLAHANAQTIRYSLKNNTITYFNESDVD 201
Query: 322 -SSSV---CDSCVLGK-----HV---RLPFSSSAIITLRPFDILHSDLWTSPV--LSTAG 367
SS++ C C++GK H+ RL + +S PF LH+D++ PV L +
Sbjct: 202 WSSAIDYQCPDCLIGKSTKHRHIKGSRLKYQNS----YEPFQYLHTDIF-GPVHNLPKSA 256
Query: 368 HRYYVLFLDDHTDFLWTFPIS--KKSQVYETFTTLATLIKTQFSANIKCLQCDNGREYDN 425
Y++ F D+ T F W +P+ ++ + + FTT+ IK QF A++ +Q D G EY N
Sbjct: 257 PSYFISFTDETTKFRWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTN 316
Query: 426 DSFHRYCDANGLIFRFSCPHTSSQNGKAERKIRTINNMIRTLLAHSSVPPSFWHHALQMA 485
+ H++ + NG+ ++ S +G AER RT+ + RT L S +P W A++ +
Sbjct: 317 RTLHKFLEKNGITPCYTTTADSRAHGVAERLNRTLLDDCRTQLQCSGLPNHLWFSAIEFS 376
Query: 486 TYLLNILPRKTLQNDSPTQLLYHRDPSYSHLRVFGCLCFPLFP---SATIN------KLQ 536
T + N L SP + + H + G L P +N K+
Sbjct: 377 TIVRNSLA-------SPKS----KKSARQHAGLAGLDISTLLPFGQPVIVNDHNPNSKIH 425
Query: 537 PRSTPCVFLGYPMNHRGY--------KCYDLSHRKILISRHVIFDETRFPF----ADLSL 584
PR P L N GY K D ++ IL + D+ + DL+
Sbjct: 426 PRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQGKESRLDQFNYDALTFDEDLNR 485
Query: 585 TPAPSYECF--------TEDLPPSLIHHWQTVSSRPPDP----PVQPSSPTDSSPPL--- 629
A SY F + DL H +Q+ P+ + SPTDS+PP
Sbjct: 486 LTA-SYHSFIASNEIQQSNDLNIESDHDFQSDIELHPEQLRNVLSKAVSPTDSTPPSTHT 544
Query: 630 --SALVSPTASPSPLPLPP 646
S VS T +P + P
Sbjct: 545 EDSKRVSKTNIRAPREVDP 563
Score = 106 bits (265), Expect = 3e-22
Identities = 129/518 (24%), Positives = 216/518 (40%), Gaps = 70/518 (13%)
Query: 701 AMQSEFNALIRSNTW---------ELVPRPCDVNVIRCMWIFRHKKQSNGLFERYKARLV 751
A E N L++ TW E+ P+ VI M+IF K+ +KAR V
Sbjct: 826 AYHKEVNQLLKMKTWDTDKYYDRKEIDPK----RVINSMFIFNRKRDGT-----HKARFV 876
Query: 752 GDGRSQIAGVDCDETFSPVVKPATIRTVLSIALSRSWPIHQLDVQNAFLHGDLHETIYMH 811
G Q S V + T LS+AL ++ I QLD+ +A+L+ D+ E +Y+
Sbjct: 877 ARGDIQHPDTYDSGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIR 936
Query: 812 HPLGFRDPH--HPDYVCRLKKSLYGLKQAPRAWYQRFADY-VSSIGFRHSTSDHSLFIFR 868
P PH D + RLKKSLYGLKQ+ WY+ Y + G +F
Sbjct: 937 PP-----PHLGMNDKLIRLKKSLYGLKQSGANWYETIKSYLIKQCGMEEVRGWSCVF--- 988
Query: 869 QGSDIAYILLYVDDIILVASSHDLRKSFMALLASEFAMK--DLG----PLSY-FLGIAVT 921
+ S + I L+VDD++L + + + K + L ++ K +LG + Y LG+ +
Sbjct: 989 ENSQVT-ICLFVDDMVLFSKNLNSNKRIIDKLKMQYDTKIINLGESDEEIQYDILGLEIK 1047
Query: 922 RHAGG-LFLSQSTYATEIIARAGMASCNPSATPVDTKQKLSSSSGTPC------------ 968
G + L TE I + + P++ K + S+ G P
Sbjct: 1048 YQRGKYMKLGMENSLTEKIPKLNV--------PLNPKGRKLSAPGQPGLYIDQQELELEE 1099
Query: 969 EDASL----YRSLDGALQYLTFT-RPDISYAVQQVCLHMHAPHTKHMLALKRVLRYVRGT 1023
+D + + L G Y+ + R D+ Y + + H+ P + + +++++ T
Sbjct: 1100 DDYKMKVHEMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSKQVLDMTYELIQFIWNT 1159
Query: 1024 LTYGLHLYPS----PVETLVSYTDADWGGCPDTRRSTSGYCVFLGDNLISWSSKRQPTLS 1079
L + S P LV +DA +G P +S G L +I S +
Sbjct: 1160 RDKQLIWHKSKPVKPTNKLVVISDASYGNQP-YYKSQIGNIYLLNGKVIGGKSTKASLTC 1218
Query: 1080 RSSAEAEYRGVANVVSESCWIRNLLLEL-HFPLSQATLVHCDNVSAIYLSGNPVHHQRTK 1138
S+ EAE ++ V + L+ EL P+++ L + +I +S N R +
Sbjct: 1219 TSTTEAEIHAISESVPLLNNLSYLIQELDKKPITKGLLTDSKSTISIIISNNE-EKFRNR 1277
Query: 1139 HIEMDIHFVREKVVRGQARVLHVPSRHQIADIFTKGLP 1176
+R++V V ++ ++ IAD+ TK LP
Sbjct: 1278 FFGTKAMRLRDEVSGNHLHVCYIETKKNIADVMTKPLP 1315
>YCB9_YEAST (P25384) Transposon Ty2 protein B (Ty1-17 protein B)
Length = 1770
Score = 110 bits (275), Expect = 2e-23
Identities = 97/362 (26%), Positives = 156/362 (42%), Gaps = 48/362 (13%)
Query: 168 MDTGASSHTAASQGTLTSYSNLSHLNQKLIVGSGQGIPIQGSGYTSIPTPHKPLALNHVL 227
+D+GAS S L + S +N ++ Q IPI G + L
Sbjct: 456 IDSGASQTLVRSAHYLHHATPNSEIN--IVDAQKQDIPINAIGNLHFNFQNGTKTSIKAL 513
Query: 228 HTPRIIKNLISVRQLTTDNNVSVSFDPFGFSVSDFKTGMPLLRCNSLGDLY--------- 278
HTP I +L+S+ +L + N++ F SD P+++ GD Y
Sbjct: 514 HTPNIAYDLLSLSELA-NQNITACFTRNTLERSDGTVLAPIVKH---GDFYWLSKKYLIP 569
Query: 279 ---------PVTRSSPFAGLASSVWHNRLGHPASSALNH-LRNNKLIFCEPS------RS 322
V +S + H LGH ++ L+ N + + + S S
Sbjct: 570 SHISKLTINNVNKSKSVNKYPYPLIHRMLGHANFRSIQKSLKKNAVTYLKESDIEWSNAS 629
Query: 323 SSVCDSCVLGK-----HV---RLPFSSSAIITLRPFDILHSDLWTSPV--LSTAGHRYYV 372
+ C C++GK HV RL + S PF LH+D++ PV L + Y++
Sbjct: 630 TYQCPDCLIGKSTKHRHVKGSRLKYQES----YEPFQYLHTDIF-GPVHHLPKSAPSYFI 684
Query: 373 LFLDDHTDFLWTFPIS--KKSQVYETFTTLATLIKTQFSANIKCLQCDNGREYDNDSFHR 430
F D+ T F W +P+ ++ + FT++ IK QF+A + +Q D G EY N + H+
Sbjct: 685 SFTDEKTRFQWVYPLHDRREESILNVFTSILAFIKNQFNARVLVIQMDRGSEYTNKTLHK 744
Query: 431 YCDANGLIFRFSCPHTSSQNGKAERKIRTINNMIRTLLAHSSVPPSFWHHALQMATYLLN 490
+ G+ ++ S +G AER RT+ N RTLL S +P W A++ +T + N
Sbjct: 745 FFTNRGITACYTTTADSRAHGVAERLNRTLLNDCRTLLHCSGLPNHLWFSAVEFSTIIRN 804
Query: 491 IL 492
L
Sbjct: 805 SL 806
Score = 104 bits (260), Expect = 1e-21
Identities = 136/567 (23%), Positives = 233/567 (40%), Gaps = 68/567 (11%)
Query: 648 PPAPPVRTMTTRSMHGISKPKKPFSLSVSIDDPSISPLPHNPKQALSDPNWKSAMQSEFN 707
PP R ++ G+ K KP ++ D+ + +N D + A E +
Sbjct: 1221 PPRSKKRINLIAAIKGV-KSIKPVRTTLRYDEA----ITYNKDNKEKD-RYVEAYHKEIS 1274
Query: 708 ALIRSNTWELVPRPCDVN------VIRCMWIFRHKKQSNGLFERYKARLVGDGRSQIAGV 761
L++ NTW+ + D N VI M+IF K+ +KAR V G Q
Sbjct: 1275 QLLKMNTWD-TNKYYDRNDIDPKKVINSMFIFNKKRDGT-----HKARFVARGDIQHPDT 1328
Query: 762 DCDETFSPVVKPATIRTVLSIALSRSWPIHQLDVQNAFLHGDLHETIYMHHP--LGFRDP 819
+ S V + T LSIAL + I QLD+ +A+L+ D+ E +Y+ P LG D
Sbjct: 1329 YDSDMQSNTVHHYALMTSLSIALDNDYYITQLDISSAYLYADIKEELYIRPPPHLGLNDK 1388
Query: 820 HHPDYVCRLKKSLYGLKQAPRAWYQRFADYVSSIGFRHSTSDHSLFIFRQGSDIAYILLY 879
+ RL+KSLYGLKQ+ WY+ Y+ + S +F+ I L+
Sbjct: 1389 -----LLRLRKSLYGLKQSGANWYETIKSYLINCCDMQEVRGWSC-VFKNSQ--VTICLF 1440
Query: 880 VDDIILVASSHDLRKSFMALLASEFAMK--DLG----PLSY-FLGIAVT-RHAGGLFLSQ 931
VDD+IL + + K + L ++ K +LG + Y LG+ + + + + L
Sbjct: 1441 VDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIKYQRSKYMKLGM 1500
Query: 932 STYATEIIARAGMASCNPSATPVDTKQKLSSSSGTP----------------CEDASLYR 975
TE + + + P++ K K + G P E +
Sbjct: 1501 EKSLTEKLPKLNV--------PLNPKGKKLRAPGQPGHYIDQDELEIDEDEYKEKVHEMQ 1552
Query: 976 SLDGALQYLTFT-RPDISYAVQQVCLHMHAPHTKHMLALKRVLRYVRGT----LTYGLHL 1030
L G Y+ + R D+ Y + + H+ P + + +++++ T L + +
Sbjct: 1553 KLIGLASYVGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQLIWHKNK 1612
Query: 1031 YPSPVETLVSYTDADWGGCPDTRRSTSGYCVFLGDNLISWSSKRQPTLSRSSAEAEYRGV 1090
P LV+ +DA +G P +S G L +I S + S+ EAE V
Sbjct: 1613 PTKPDNKLVAISDASYGNQP-YYKSQIGNIFLLNGKVIGGKSTKASLTCTSTTEAEIHAV 1671
Query: 1091 ANVVSESCWIRNLLLELH-FPLSQATLVHCDNVSAIYLSGNPVHHQRTKHIEMDIHFVRE 1149
+ + + +L+ EL+ P+ + L + +I S N R + +R+
Sbjct: 1672 SEAIPLLNNLSHLVQELNKKPIIKGLLTDSRSTISIIKSTNE-EKFRNRFFGTKAMRLRD 1730
Query: 1150 KVVRGQARVLHVPSRHQIADIFTKGLP 1176
+V V ++ ++ IAD+ TK LP
Sbjct: 1731 EVSGNNLYVYYIETKKNIADVMTKPLP 1757
>M820_ARATH (P92520) Hypothetical mitochondrial protein AtMg00820
(ORF170)
Length = 170
Score = 108 bits (271), Expect = 7e-23
Identities = 58/128 (45%), Positives = 80/128 (62%), Gaps = 3/128 (2%)
Query: 656 MTTRSMHGISKPKKPFSLSVSIDDPSISPLPHNPKQALSDPNWKSAMQSEFNALIRSNTW 715
M TRS GI+K +SL+++ +I P + AL DP W AMQ E +AL R+ TW
Sbjct: 1 MLTRSKAGINKLNPKYSLTITT---TIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTW 57
Query: 716 ELVPRPCDVNVIRCMWIFRHKKQSNGLFERYKARLVGDGRSQIAGVDCDETFSPVVKPAT 775
LVP P + N++ C W+F+ K S+G +R KARLV G Q G+ ET+SPVV+ AT
Sbjct: 58 ILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTAT 117
Query: 776 IRTVLSIA 783
IRT+L++A
Sbjct: 118 IRTILNVA 125
>M240_ARATH (P93290) Hypothetical mitochondrial protein AtMg00240
(ORF111a)
Length = 111
Score = 74.7 bits (182), Expect = 1e-12
Identities = 34/78 (43%), Positives = 49/78 (62%)
Query: 983 YLTFTRPDISYAVQQVCLHMHAPHTKHMLALKRVLRYVRGTLTYGLHLYPSPVETLVSYT 1042
YLT TRPD+++AV ++ A T M A+ +VL YV+GT+ GL + L ++
Sbjct: 2 YLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFA 61
Query: 1043 DADWGGCPDTRRSTSGYC 1060
D+DW CPDTRRS +G+C
Sbjct: 62 DSDWASCPDTRRSVTGFC 79
>POL_SFV1 (P23074) Pol polyprotein [Contains: Protease (EC 3.4.23.-);
Reverse transcriptase/ribonuclease H (EC 2.7.7.49) (EC
3.1.26.4) (RT); Integrase (IN)]
Length = 1161
Score = 58.9 bits (141), Expect = 8e-08
Identities = 44/172 (25%), Positives = 73/172 (41%), Gaps = 10/172 (5%)
Query: 321 RSSSVCDSCVLGKHVRL--PFSSSAIITLRPFDILHSDLWTSPVLSTAGHRYYVLFLDDH 378
+S C C++ L P + L+PFD + D + P+ + G+ + ++ +D
Sbjct: 853 KSIRQCKQCLVTNATNLTSPPILRPVKPLKPFDKFYID-YIGPLPPSNGYLHVLVVVDSM 911
Query: 379 TDFLWTFPISKKSQVYETFTTLATLIKTQFSANIKCLQCDNGREYDNDSFHRYCDANGLI 438
T F+W +P S T T+ L A K L D G + + +F + G+
Sbjct: 912 TGFVWLYPTKAPS----TSATVKALNMLTSIAIPKVLHSDQGAAFTSSTFADWAKEKGIQ 967
Query: 439 FRFSCPHTSSQNGKAERKIRTINNMIRTLLAHSSVPPSFWHHALQMATYLLN 490
FS P+ +GK ERK I ++ LL P+ W+ L + LN
Sbjct: 968 LEFSTPYHPQSSGKVERKNSDIKRLLTKLLIGR---PAKWYDLLPVVQLALN 1016
>POL_FOAMV (P14350) Pol polyprotein [Contains: Reverse
transcriptase/ribonuclease H (EC 2.7.7.49) (EC 3.1.26.4)
(RT); Integrase (IN)]
Length = 886
Score = 55.8 bits (133), Expect = 7e-07
Identities = 43/163 (26%), Positives = 69/163 (41%), Gaps = 9/163 (5%)
Query: 348 RPFDILHSDLWTSPVLSTAGHRYYVLFLDDHTDFLWTFPISKKSQVYETFTTLATLIKTQ 407
+PFD D + P+ + G+ Y ++ +D T F W +P S T T+ +L
Sbjct: 674 KPFDKFFID-YIGPLPPSQGYLYVLVVVDGMTGFTWLYPTKAPS----TSATVKSLNVLT 728
Query: 408 FSANIKCLQCDNGREYDNDSFHRYCDANGLIFRFSCPHTSSQNGKAERKIRTINNMIRTL 467
A K + D G + + +F + G+ FS P+ K ERK I ++ L
Sbjct: 729 SIAIPKVIHSDQGAAFTSSTFAEWAKERGIHLEFSTPYHPQSGSKVERKNSDIKRLLTKL 788
Query: 468 LAHSSVPPSFWHHALQMATYLLNILPRKTLQNDSPTQLLYHRD 510
L P+ W+ L + LN L+ +P QLL+ D
Sbjct: 789 LVGR---PTKWYDLLPVVQLALNNTYSPVLKY-TPHQLLFGID 827
>POL_SFV3L (P27401) Pol polyprotein [Contains: Protease (EC 3.4.23.-);
Reverse transcriptase/ribonuclease H (EC 2.7.7.49) (EC
3.1.26.4) (RT); Integrase (IN)]
Length = 1157
Score = 53.9 bits (128), Expect = 3e-06
Identities = 37/144 (25%), Positives = 63/144 (43%), Gaps = 8/144 (5%)
Query: 347 LRPFDILHSDLWTSPVLSTAGHRYYVLFLDDHTDFLWTFPISKKSQVYETFTTLATLIKT 406
++PFD D + P+ + G+ + ++ +D T F+W +P S T T+ L
Sbjct: 883 VKPFDKFFID-YIGPLPPSNGYLHVLVVVDSMTGFVWLYPTKAPS----TSATVKALNML 937
Query: 407 QFSANIKCLQCDNGREYDNDSFHRYCDANGLIFRFSCPHTSSQNGKAERKIRTINNMIRT 466
A K + D G + + +F + G+ FS P+ +GK ERK I ++
Sbjct: 938 TSIAVPKVIHSDQGAAFTSATFADWAKNKGIQLEFSTPYHPQSSGKVERKNSDIKRLLTK 997
Query: 467 LLAHSSVPPSFWHHALQMATYLLN 490
LL P+ W+ L + LN
Sbjct: 998 LLVGR---PAKWYDLLPVVQLALN 1018
>DZP1_MOUSE (Q9JII5) DAZ-associated protein 1 (Deleted in
azoospermia-associated protein 1)
Length = 406
Score = 53.5 bits (127), Expect = 3e-06
Identities = 54/187 (28%), Positives = 74/187 (38%), Gaps = 15/187 (8%)
Query: 25 SSQQRPTYRSDQGHSNHRYGSGQNRNYQGGSGKPRKKGGSRYPGSPGSSGSSAASPPPWR 84
+ Q PT++ G +GQ GG G P G+ P P +S ++PP
Sbjct: 219 AGQPPPTWQQGYGPQGMWVPAGQAI---GGYGPPPAGRGAPPPPPPFTS-YIVSTPPGGF 274
Query: 85 PPPQASWNPWGWDPPPGWAPSPWGMPPCPYPTSQWSRPMGVPQQPGVLGPRPQAYTATAS 144
PPPQ P G+ PP ++ +G P P P Q++ P GVP P G P A+
Sbjct: 275 PPPQGF--PQGYGAPPQFS---FGYGPPPPPPDQFA-PPGVPPPPATPGAAPLAF----P 324
Query: 145 PAPTDIAAAMHTMSLTPPDTPWYMDTGASSHTAASQGTLTSYSNLSHLNQKLIVGSGQGI 204
P P+ A M PD P+ + QG + GSG G
Sbjct: 325 PPPSQAAPDMSKPPTAQPDFPYGQYGYGQDLSGFGQGFSDPSQQPPSYGGPSVPGSG-GP 383
Query: 205 PIQGSGY 211
P GSG+
Sbjct: 384 PAGGSGF 390
>DZP1_HUMAN (Q96EP5) DAZ-associated protein 1 (Deleted in
azoospermia-associated protein 1)
Length = 407
Score = 53.5 bits (127), Expect = 3e-06
Identities = 55/188 (29%), Positives = 75/188 (39%), Gaps = 16/188 (8%)
Query: 25 SSQQRPTYRSDQGHSNHRYGSGQNRNYQGGSGKPRKKGGSRYPGSPGSSGSSAASPPPWR 84
+ Q PT++ G +GQ GG G P G+ P P +S ++PP
Sbjct: 219 AGQPPPTWQQGYGPQGMWVPAGQAI---GGYGPPPAGRGAPPPPPPFTS-YIVSTPPGGF 274
Query: 85 PPPQASWNPWGWDPPPGWAPSPWGMPPCPYPTSQWSRPMGVPQQPGVLGPRPQAYTATAS 144
PPPQ P G+ PP ++ +G P P P Q++ P GVP P G P A+
Sbjct: 275 PPPQGF--PQGYGAPPQFS---FGYGPPPPPPDQFA-PPGVPPPPATPGAAPLAF----P 324
Query: 145 PAPTDIAAAMHTMSLTPPDTPWYMDTGASSHTAA-SQGTLTSYSNLSHLNQKLIVGSGQG 203
P P+ A M PD P+ G + QG + GSG G
Sbjct: 325 PPPSQAAPDMSKPPTAQPDFPYGQYAGYGQDLSGFGQGFSDPSQQPPSYGGPSVPGSG-G 383
Query: 204 IPIQGSGY 211
P GSG+
Sbjct: 384 PPAGGSGF 391
>SSGP_VOLCA (P21997) Sulfated surface glycoprotein 185 precursor
(SSG 185)
Length = 485
Score = 53.1 bits (126), Expect = 4e-06
Identities = 38/103 (36%), Positives = 42/103 (39%), Gaps = 11/103 (10%)
Query: 586 PAPSYECFTEDLPPSLIHHWQTVSSRPPDPPVQPSSPT----DSSPPLSALVSPTASPSP 641
PAP+ LPPS T SSRPP PP P P+ SPP P P P
Sbjct: 222 PAPN----NSPLPPS---PQPTASSRPPSPPPSPRPPSPPPPSPSPPPPPPPPPPPPPPP 274
Query: 642 LPLPPVPPAPPVRTMTTRSMHGISKPKKPFSLSVSIDDPSISP 684
P PP PP PP S P+KP S S + P P
Sbjct: 275 PPSPPPPPPPPPPPPPPPPPPSPSPPRKPPSPSPPVPPPPSPP 317
Score = 40.4 bits (93), Expect = 0.029
Identities = 37/130 (28%), Positives = 45/130 (34%), Gaps = 12/130 (9%)
Query: 64 SRYPGSPGSSGSSAASPPPWRPPPQASWNPWGWDPPPGWAPSPWGMPPCPYPTSQWSRPM 123
S P SP + SS PP P P + P PPP P P PP P P P
Sbjct: 227 SPLPPSPQPTASSRPPSPPPSPRPPSPPPPSPSPPPPPPPPPPPPPPPPPSPPPPPPPPP 286
Query: 124 GVPQQPGVLGPRPQAYTATASP-------APTDIAAA-----MHTMSLTPPDTPWYMDTG 171
P P P P + SP P+ + AA +S +P PW +
Sbjct: 287 PPPPPPPPPSPSPPRKPPSPSPPVPPPPSPPSVLPAATGFPFCECVSRSPSSYPWRVTVA 346
Query: 172 ASSHTAASQG 181
S S G
Sbjct: 347 NVSAVTISGG 356
Score = 35.4 bits (80), Expect = 0.93
Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 4/39 (10%)
Query: 612 PPDPPVQPSSPTDSSPPLSALVSPTASPSPLPLPPVPPA 650
PP PP P P SPP P+ SP P+P PP PP+
Sbjct: 284 PPPPPPPPPPPPSPSPPRKP---PSPSP-PVPPPPSPPS 318
Score = 34.7 bits (78), Expect = 1.6
Identities = 18/42 (42%), Positives = 20/42 (46%), Gaps = 5/42 (11%)
Query: 615 PPVQPSSPTDSSPPLSALVSPTA-----SPSPLPLPPVPPAP 651
P V P P ++ PL PTA SP P P PP PP P
Sbjct: 215 PNVNPIGPAPNNSPLPPSPQPTASSRPPSPPPSPRPPSPPPP 256
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.319 0.134 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 152,889,327
Number of Sequences: 164201
Number of extensions: 7325719
Number of successful extensions: 50505
Number of sequences better than 10.0: 1020
Number of HSP's better than 10.0 without gapping: 213
Number of HSP's successfully gapped in prelim test: 850
Number of HSP's that attempted gapping in prelim test: 31179
Number of HSP's gapped (non-prelim): 9336
length of query: 1199
length of database: 59,974,054
effective HSP length: 122
effective length of query: 1077
effective length of database: 39,941,532
effective search space: 43017029964
effective search space used: 43017029964
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 72 (32.3 bits)
Lotus: description of TM0490.3