BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0476a.7
         (109 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

VT3A_SFVKA (P25949) Protein T3A                                        27  6.5

>VT3A_SFVKA (P25949) Protein T3A
          Length = 151

 Score = 27.3 bits (59), Expect = 6.5
 Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 3/54 (5%)

Query: 13  IYQDTVKAIVACLANTVDSAESVLRVAATGHDKRLYFKVSPSLY*ILTHFVHVW 66
           +++D V+ +V C    VDS+ES++R A   HD   Y   + ++  +L      W
Sbjct: 54  VFRDNVRWLVRCSYKYVDSSESLIR-AMLRHDN--YITEACAVIGLLAQVAEYW 104


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.366    0.161    0.597 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,677,917
Number of Sequences: 164201
Number of extensions: 260641
Number of successful extensions: 1855
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1855
Number of HSP's gapped (non-prelim): 1
length of query: 109
length of database: 59,974,054
effective HSP length: 85
effective length of query: 24
effective length of database: 46,016,969
effective search space: 1104407256
effective search space used: 1104407256
T: 11
A: 40
X1: 14 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 36 (21.6 bits)
S2: 58 (26.9 bits)