BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0404.13
(247 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AG_TOBAC (Q43585) Floral homeotic protein AGAMOUS (NAG1) 340 2e-93
AG_PETHY (Q40885) Floral homeotic protein AGAMOUS (pMADS3) 336 3e-92
AG_LYCES (Q40168) Floral homeotic protein AGAMOUS (TAG1) 336 4e-92
AG_PANGI (Q40872) Floral homeotic protein AGAMOUS (GAG2) 335 5e-92
AG_BRANA (Q01540) Floral homeotic protein AGAMOUS 327 2e-89
AG_ARATH (P17839) Floral homeotic protein AGAMOUS 326 3e-89
AGL1_ARATH (P29381) Agamous-like MADS box protein AGL1 (Protein ... 278 1e-74
AGL5_ARATH (P29385) Agamous-like MADS box protein AGL5 275 6e-74
AG11_ARATH (Q38836) Agamous-like MADS box protein AGL11 252 5e-67
CMB1_DIACA (Q39685) MADS box protein CMB1 167 2e-41
AGL6_ARATH (P29386) Agamous-like MADS box protein AGL6 161 1e-39
AGL9_PETHY (Q03489) Agamous-like MADS box protein AGL9 homolog (... 157 3e-38
AGL3_ARATH (P29383) Agamous-like MADS box protein AGL3 155 9e-38
SEP1_ARATH (P29382) Developmental protein SEPALLATA1 (Agamous-li... 153 4e-37
AGL8_SOLTU (Q42429) Agamous-like MADS box protein AGL8 homolog (... 153 4e-37
M13_GNEGN (Q9XGJ4) MADS box protein GGM13 152 7e-37
AGL9_LYCES (Q42464) Agamous-like MADS box protein AGL9 homolog (... 152 9e-37
AG19_ARATH (O82743) Agamous-like MADS box protein AGL19 152 9e-37
AG13_ARATH (Q38837) Agamous-like MADS box protein AGL13 152 9e-37
AGL9_ARADE (Q38694) Agamous-like MADS box protein AGL9 homolog (... 151 1e-36
>AG_TOBAC (Q43585) Floral homeotic protein AGAMOUS (NAG1)
Length = 248
Score = 340 bits (871), Expect = 2e-93
Identities = 176/239 (73%), Positives = 204/239 (84%), Gaps = 6/239 (2%)
Query: 13 SPQRKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSNRGRLY 72
SPQRK+GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFS+RGRLY
Sbjct: 12 SPQRKLGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLY 71
Query: 73 EYANNSVKASIERYKKACSDSSGGGSTSGANAQFYQQEAAKLRVQISNLQNHNRQMLGEA 132
EYANNSVKA+IERYKKACSDSS GS S ANAQ+YQQEA+KLR QI NLQN NR MLGE+
Sbjct: 72 EYANNSVKATIERYKKACSDSSNTGSISEANAQYYQQEASKLRAQIGNLQNQNRNMLGES 131
Query: 133 LSNMNARDLKNLETKLEKGISRIRSKKNEMLFAEIEYMQKREIDLHNSNQLLRAKIAESD 192
L+ ++ RDLKNLE K+EKGIS+IRSKKNE+LFAEIEYMQKREIDLHN+NQ LRAKIAE++
Sbjct: 132 LAALSLRDLKNLEQKIEKGISKIRSKKNELLFAEIEYMQKREIDLHNNNQYLRAKIAETE 191
Query: 193 ----ERKNHNFNMLPGTTNFESLQQSQQPFDSRGFFQVTGLQPNNNQCARQDQISLQFV 247
+++ N++PG++++E + Q FD+R + QV GLQ NN+ RQDQ SLQ V
Sbjct: 192 RAQQQQQQQQMNLMPGSSSYELVPPPHQ-FDTRNYLQVNGLQTNNHY-TRQDQPSLQLV 248
>AG_PETHY (Q40885) Floral homeotic protein AGAMOUS (pMADS3)
Length = 242
Score = 336 bits (862), Expect = 3e-92
Identities = 173/235 (73%), Positives = 202/235 (85%), Gaps = 4/235 (1%)
Query: 13 SPQRKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSNRGRLY 72
SPQRK+GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFS+RGRLY
Sbjct: 12 SPQRKLGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLY 71
Query: 73 EYANNSVKASIERYKKACSDSSGGGSTSGANAQFYQQEAAKLRVQISNLQNHNRQMLGEA 132
EYANNSVKA+IERYKKACSDSS GS + ANAQ+YQQEA+KLR QI NLQN NR LGE+
Sbjct: 72 EYANNSVKATIERYKKACSDSSNTGSIAEANAQYYQQEASKLRAQIGNLQNQNRNFLGES 131
Query: 133 LSNMNARDLKNLETKLEKGISRIRSKKNEMLFAEIEYMQKREIDLHNSNQLLRAKIAESD 192
L+ +N RDL+NLE K+EKGIS+IR+KKNE+LFAEIEYMQKREIDLHN+NQ LRAKIAE++
Sbjct: 132 LAALNLRDLRNLEQKIEKGISKIRAKKNELLFAEIEYMQKREIDLHNNNQYLRAKIAETE 191
Query: 193 ERKNHNFNMLPGTTNFESLQQSQQPFDSRGFFQVTGLQPNNNQCARQDQISLQFV 247
++ N++PG+++++ L QQ FD+R + QV GLQ NN+ RQDQ LQ V
Sbjct: 192 --RSQQMNLMPGSSSYD-LVPPQQSFDARNYLQVNGLQTNNHY-PRQDQPPLQLV 242
>AG_LYCES (Q40168) Floral homeotic protein AGAMOUS (TAG1)
Length = 248
Score = 336 bits (861), Expect = 4e-92
Identities = 171/238 (71%), Positives = 200/238 (83%), Gaps = 4/238 (1%)
Query: 13 SPQRKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSNRGRLY 72
SPQRK+GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVAL+VFSNRGRLY
Sbjct: 12 SPQRKLGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSNRGRLY 71
Query: 73 EYANNSVKASIERYKKACSDSSGGGSTSGANAQFYQQEAAKLRVQISNLQNHNRQMLGEA 132
EYANNSVKA+IERYKKACSDSS GS S ANAQ+YQQEA+KLR QI NL N NR M+GEA
Sbjct: 72 EYANNSVKATIERYKKACSDSSNTGSVSEANAQYYQQEASKLRAQIGNLMNQNRNMMGEA 131
Query: 133 LSNMNARDLKNLETKLEKGISRIRSKKNEMLFAEIEYMQKREIDLHNSNQLLRAKIAESD 192
L+ M ++LKNLE ++EKGIS+IRSKKNE+LFAEIEYMQKRE+DLHN+NQ LRAKIAE++
Sbjct: 132 LAGMKLKELKNLEQRIEKGISKIRSKKNELLFAEIEYMQKREVDLHNNNQYLRAKIAETE 191
Query: 193 --ERKNHNFNMLPG-TTNFESLQQSQQPFDSRGFFQVTGLQPNNNQCARQDQISLQFV 247
+ ++ N++PG ++N+ L Q FD+R + QV GLQ NN+ RQDQ +Q V
Sbjct: 192 RAQHQHQQMNLMPGSSSNYHELVPPPQQFDTRNYLQVNGLQTNNHY-PRQDQPPIQLV 248
>AG_PANGI (Q40872) Floral homeotic protein AGAMOUS (GAG2)
Length = 242
Score = 335 bits (860), Expect = 5e-92
Identities = 173/239 (72%), Positives = 201/239 (83%), Gaps = 4/239 (1%)
Query: 9 SANNSPQRKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSNR 68
S N SPQRK+GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFS R
Sbjct: 8 SGNLSPQRKLGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTR 67
Query: 69 GRLYEYANNSVKASIERYKKACSDSSGGGSTSGANAQFYQQEAAKLRVQISNLQNHNRQM 128
GRLYEYANNSVK +IERYKKAC+DS S S ANAQFYQQEA+KLR +IS++Q +NR M
Sbjct: 68 GRLYEYANNSVKGTIERYKKACTDSPNTSSVSEANAQFYQQEASKLRQEISSIQKNNRNM 127
Query: 129 LGEALSNMNARDLKNLETKLEKGISRIRSKKNEMLFAEIEYMQKREIDLHNSNQLLRAKI 188
+GE+L ++ RDLK LETKLEKGISRIRSKKNE+LFAEIEYMQK+EIDLHN+NQ LRAKI
Sbjct: 128 MGESLGSLTVRDLKGLETKLEKGISRIRSKKNELLFAEIEYMQKKEIDLHNNNQYLRAKI 187
Query: 189 AESDERKNHNFNMLPGTTNFESLQQSQQPFDSRGFFQVTGLQPNNNQCARQDQISLQFV 247
AE +ER + N++PG++++E Q FD R + Q+ GLQPNN+ +RQDQ +LQ V
Sbjct: 188 AE-NERAQQHMNLMPGSSDYE--LAPPQSFDGRNYIQLNGLQPNNHY-SRQDQTALQLV 242
>AG_BRANA (Q01540) Floral homeotic protein AGAMOUS
Length = 252
Score = 327 bits (837), Expect = 2e-89
Identities = 164/247 (66%), Positives = 203/247 (81%), Gaps = 8/247 (3%)
Query: 8 MSANNSPQRKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSN 67
+ +SPQRK GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFS+
Sbjct: 7 LGGESSPQRKAGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSS 66
Query: 68 RGRLYEYANNSVKASIERYKKACSDSSGGGSTSGANAQFYQQEAAKLRVQISNLQNHNRQ 127
RGRLYEY+NNSVK +IERYKKA SD+S GS + NAQ+YQQE+AKLR QI ++QN NRQ
Sbjct: 67 RGRLYEYSNNSVKGTIERYKKAISDNSNTGSVAEINAQYYQQESAKLRQQIISIQNSNRQ 126
Query: 128 MLGEALSNMNARDLKNLETKLEKGISRIRSKKNEMLFAEIEYMQKREIDLHNSNQLLRAK 187
++GE + +M+ ++L+NLE +L++ ++RIRSKKNE+LFAEI+YMQKRE+DLHN NQLLRAK
Sbjct: 127 LMGETIGSMSPKELRNLEGRLDRSVNRIRSKKNELLFAEIDYMQKREVDLHNDNQLLRAK 186
Query: 188 IAESDERKNHNFNMLPGTTNFESL----QQSQQPFDSRGFFQVTGLQPNN---NQCARQD 240
IAE +ER N + +++PG +N+E + Q QPFDSR +FQV LQPNN + R+D
Sbjct: 187 IAE-NERNNPSMSLMPGGSNYEQIMPPPQTQPQPFDSRNYFQVAALQPNNHHYSSAGRED 245
Query: 241 QISLQFV 247
Q +LQ V
Sbjct: 246 QTALQLV 252
>AG_ARATH (P17839) Floral homeotic protein AGAMOUS
Length = 252
Score = 326 bits (836), Expect = 3e-89
Identities = 165/247 (66%), Positives = 203/247 (81%), Gaps = 8/247 (3%)
Query: 8 MSANNSPQRKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSN 67
+ ++SP RK GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFS+
Sbjct: 7 LGGDSSPLRKSGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSS 66
Query: 68 RGRLYEYANNSVKASIERYKKACSDSSGGGSTSGANAQFYQQEAAKLRVQISNLQNHNRQ 127
RGRLYEY+NNSVK +IERYKKA SD+S GS + NAQ+YQQE+AKLR QI ++QN NRQ
Sbjct: 67 RGRLYEYSNNSVKGTIERYKKAISDNSNTGSVAEINAQYYQQESAKLRQQIISIQNSNRQ 126
Query: 128 MLGEALSNMNARDLKNLETKLEKGISRIRSKKNEMLFAEIEYMQKREIDLHNSNQLLRAK 187
++GE + +M+ ++L+NLE +LE+ I+RIRSKKNE+LF+EI+YMQKRE+DLHN NQ+LRAK
Sbjct: 127 LMGETIGSMSPKELRNLEGRLERSITRIRSKKNELLFSEIDYMQKREVDLHNDNQILRAK 186
Query: 188 IAESDERKNHNFNMLPGTTNFESL----QQSQQPFDSRGFFQVTGLQPNN---NQCARQD 240
IAE +ER N + +++PG +N+E L Q QPFDSR +FQV LQPNN + RQD
Sbjct: 187 IAE-NERNNPSISLMPGGSNYEQLMPPPQTQSQPFDSRNYFQVAALQPNNHHYSSAGRQD 245
Query: 241 QISLQFV 247
Q +LQ V
Sbjct: 246 QTALQLV 252
>AGL1_ARATH (P29381) Agamous-like MADS box protein AGL1 (Protein
Shatterproof 1)
Length = 248
Score = 278 bits (710), Expect = 1e-74
Identities = 151/251 (60%), Positives = 186/251 (73%), Gaps = 7/251 (2%)
Query: 1 MSSPNQSMSANNSPQRKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEV 60
M S A +S +K+GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEV
Sbjct: 1 MEEGGSSHDAESS--KKLGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEV 58
Query: 61 ALIVFSNRGRLYEYANNSVKASIERYKKACSDSSGGGSTSGANAQFYQQEAAKLRVQISN 120
AL++FS RGRLYEYANNSV+ +IERYKKACSD+ S + AN Q+YQQEA+KLR QI +
Sbjct: 59 ALVIFSTRGRLYEYANNSVRGTIERYKKACSDAVNPPSVTEANTQYYQQEASKLRRQIRD 118
Query: 121 LQNHNRQMLGEALSNMNARDLKNLETKLEKGISRIRSKKNEMLFAEIEYMQKREIDLHNS 180
+QN NR ++GE+L ++N ++LKNLE +LEKGISR+RSKKNE+L AEIEYMQKRE++L ++
Sbjct: 119 IQNSNRHIVGESLGSLNFKELKNLEGRLEKGISRVRSKKNELLVAEIEYMQKREMELQHN 178
Query: 181 NQLLRAKIAESDERK--NHNFNMLPGTTNFES--LQQSQQPFDSRGFFQVTGLQPNNNQC 236
N LRAKIAE +++ GTT +ES Q +R + V L+P N Q
Sbjct: 179 NMYLRAKIAEGARLNPDQQESSVIQGTTVYESGVSSHDQSQHYNRNYIPVNLLEP-NQQF 237
Query: 237 ARQDQISLQFV 247
+ QDQ LQ V
Sbjct: 238 SGQDQPPLQLV 248
>AGL5_ARATH (P29385) Agamous-like MADS box protein AGL5
Length = 246
Score = 275 bits (704), Expect = 6e-74
Identities = 145/234 (61%), Positives = 179/234 (75%), Gaps = 3/234 (1%)
Query: 16 RKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSNRGRLYEYA 75
+K+GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVAL++FS RGRLYEYA
Sbjct: 14 KKIGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYA 73
Query: 76 NNSVKASIERYKKACSDSSGGGSTSGANAQFYQQEAAKLRVQISNLQNHNRQMLGEALSN 135
NNSV+ +IERYKKACSD+ + + AN Q+YQQEA+KLR QI ++QN NR +LGE+L +
Sbjct: 74 NNSVRGTIERYKKACSDAVNPPTITEANTQYYQQEASKLRRQIRDIQNLNRHILGESLGS 133
Query: 136 MNARDLKNLETKLEKGISRIRSKKNEMLFAEIEYMQKREIDLHNSNQLLRAKIAESDERK 195
+N ++LKNLE++LEKGISR+RSKK+EML AEIEYMQKREI+L N N LR+KI E +
Sbjct: 134 LNFKELKNLESRLEKGISRVRSKKHEMLVAEIEYMQKREIELQNDNMYLRSKITERTGLQ 193
Query: 196 NHNFNMLPGTTNFES--LQQSQQPFDSRGFFQVTGLQPNNNQCARQDQISLQFV 247
+++ T +ES Q +R + V L+PN N + QDQ LQ V
Sbjct: 194 QQESSVIHQGTVYESGVTSSHQSGQYNRNYIAVNLLEPNQNS-SNQDQPPLQLV 246
>AG11_ARATH (Q38836) Agamous-like MADS box protein AGL11
Length = 230
Score = 252 bits (644), Expect = 5e-67
Identities = 123/188 (65%), Positives = 154/188 (81%)
Query: 18 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSNRGRLYEYANN 77
MGRGKIEIKRIEN+TNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFS RGRLYEYANN
Sbjct: 1 MGRGKIEIKRIENSTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 60
Query: 78 SVKASIERYKKACSDSSGGGSTSGANAQFYQQEAAKLRVQISNLQNHNRQMLGEALSNMN 137
+++++IERYKKACSDS+ + NA +YQQE+AKLR QI +QN NR ++G++LS+++
Sbjct: 61 NIRSTIERYKKACSDSTNTSTVQEINAAYYQQESAKLRQQIQTIQNSNRNLMGDSLSSLS 120
Query: 138 ARDLKNLETKLEKGISRIRSKKNEMLFAEIEYMQKREIDLHNSNQLLRAKIAESDERKNH 197
++LK +E +LEK ISRIRSKK+E+L EIE QKREI+L N N LR K+AE + + H
Sbjct: 121 VKELKQVENRLEKAISRIRSKKHELLLVEIENAQKREIELDNENIYLRTKVAEVERYQQH 180
Query: 198 NFNMLPGT 205
+ M+ G+
Sbjct: 181 HHQMVSGS 188
>CMB1_DIACA (Q39685) MADS box protein CMB1
Length = 233
Score = 167 bits (424), Expect = 2e-41
Identities = 102/232 (43%), Positives = 144/232 (61%), Gaps = 22/232 (9%)
Query: 18 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSNRGRLYEYANN 77
MGRG++E+KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEVALIVFSNRG+LYE+ +
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCST 60
Query: 78 S-VKASIERYKKACSDSSGGGSTSGANAQFYQQEAAKLRVQISNLQNHNRQMLGEALSNM 136
S + ++ERY++ CS S S + QE KL+ ++ LQ +R +LGE L +
Sbjct: 61 SCMNKTLERYQR-CSYGSLETSQPSKETESSYQEYLKLKAKVDVLQRSHRNLLGEDLGEL 119
Query: 137 NARDLKNLETKLEKGISRIRSKKNEMLFAEIEYMQKREIDLHNSNQLLRAKIAESDERKN 196
+ ++L+ LE +L+K + +IRS K + + ++ +QK+E L SN+ L+ K+ ES
Sbjct: 120 STKELEQLEHQLDKSLRQIRSIKTQHMLDQLADLQKKEEMLFESNRALKTKLEESCASFR 179
Query: 197 HNFNMLPGTTNFESLQQSQQPFDSRGFFQVTGLQPNNN-----QCARQDQIS 243
N+++ +QP D GFF+ L NNN A QDQ++
Sbjct: 180 PNWDV-------------RQPGD--GFFEPLPLPCNNNLQIGYNEATQDQMN 216
>AGL6_ARATH (P29386) Agamous-like MADS box protein AGL6
Length = 252
Score = 161 bits (408), Expect = 1e-39
Identities = 92/229 (40%), Positives = 136/229 (59%), Gaps = 7/229 (3%)
Query: 18 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSNRGRLYEYANN 77
MGRG++E+KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FS+RG+LYE+ +
Sbjct: 1 MGRGRVEMKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSV 60
Query: 78 SVKASIERYKKACSDSSGGGSTSGANAQFYQQEAAKLRVQISNLQNHNRQMLGEALSNMN 137
++++IERY + C + S + Q + QE KL+ + +L NR +LGE L M
Sbjct: 61 GIESTIERYNR-CYNCSLSNNKPEETTQSWCQEVTKLKSKYESLVRTNRNLLGEDLGEMG 119
Query: 138 ARDLKNLETKLEKGISRIRSKKNEMLFAEIEYMQKREIDLHNSNQLLRAKIAESDERKNH 197
++L+ LE +LE ++ R +K +++ E+E ++K+E L + N+ L+ K E + H
Sbjct: 120 VKELQALERQLEAALTATRQRKTQVMMEEMEDLRKKERQLGDINKQLKIKF----ETEGH 175
Query: 198 NFNMLPGTTNFESLQQSQQPFDSRGFFQVTGLQPNNNQCARQDQISLQF 246
F + + P +S F V PN C + + + F
Sbjct: 176 AFKTFQDLWANSAASVAGDPNNSE--FPVEPSHPNVLDCNTEPFLQIGF 222
>AGL9_PETHY (Q03489) Agamous-like MADS box protein AGL9 homolog
(Floral homeotic protein FBP2) (Floral binding protein
2)
Length = 241
Score = 157 bits (396), Expect = 3e-38
Identities = 82/175 (46%), Positives = 125/175 (70%), Gaps = 2/175 (1%)
Query: 18 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSNRGRLYEY-AN 76
MGRG++E+KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FSNRG+LYE+ ++
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
Query: 77 NSVKASIERYKKACSDSSGGG-STSGANAQFYQQEAAKLRVQISNLQNHNRQMLGEALSN 135
+S+ ++ERY+K + ST A QQE KL+ + LQ R +LGE L
Sbjct: 61 SSMLKTLERYQKCNYGAPETNISTREALEISSQQEYLKLKARYEALQRSQRNLLGEDLGP 120
Query: 136 MNARDLKNLETKLEKGISRIRSKKNEMLFAEIEYMQKREIDLHNSNQLLRAKIAE 190
+N+++L++LE +L+ + +IRS + +++ +++ +Q++E L+ +N+ L+ ++ E
Sbjct: 121 LNSKELESLERQLDMSLKQIRSTRTQLMLDQLQDLQRKEHALNEANRTLKQRLME 175
>AGL3_ARATH (P29383) Agamous-like MADS box protein AGL3
Length = 258
Score = 155 bits (392), Expect = 9e-38
Identities = 90/222 (40%), Positives = 138/222 (61%), Gaps = 18/222 (8%)
Query: 18 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSNRGRLYEYAN- 76
MGRGK+E+KRIEN NRQVTF KRRNGLLKKAYELSVLCDAE+AL++FSNRG+LYE+ +
Sbjct: 1 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEIALLIFSNRGKLYEFCSS 60
Query: 77 -NSVKASIERYKKACSDSSGGGSTSGANAQFYQQEAAKLRVQISNLQNHNRQMLGEALSN 135
+ + ++++Y+K S ++ + S + Q Q+ KL+ ++ LQ+ R +LGE LS
Sbjct: 61 PSGMARTVDKYRKH-SYATMDPNQSAKDLQDKYQDYLKLKSRVEILQHSQRHLLGEELSE 119
Query: 136 MNARDLKNLETKLEKGISRIRSKKNEMLFAEIEYMQKREIDLHNSNQLLRAKIAESDERK 195
M+ +L++LE +++ + +IRS K + ++ ++ +E L +N+ LR K+ +SD
Sbjct: 120 MDVNELEHLERQVDASLRQIRSTKARSMLDQLSDLKTKEEMLLETNRDLRRKLEDSDAAL 179
Query: 196 NHNFNMLPGTTNFESLQQSQQ------------PFDSRGFFQ 225
+F G++ E QQ QQ P GFF+
Sbjct: 180 TQSF---WGSSAAEQQQQHQQQQQGMSSYQSNPPIQEAGFFK 218
>SEP1_ARATH (P29382) Developmental protein SEPALLATA1 (Agamous-like
MADS box protein AGL2)
Length = 251
Score = 153 bits (386), Expect = 4e-37
Identities = 88/230 (38%), Positives = 137/230 (59%), Gaps = 8/230 (3%)
Query: 18 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSNRGRLYEYANN 77
MGRG++E+KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FSNRG+LYE+ ++
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
Query: 78 S-VKASIERYKKACSDSSGGGSTSGANAQFYQQEAAKLRVQISNLQNHNRQMLGEALSNM 136
S + +++RY+K S + + +E KL+ + NLQ R +LGE L +
Sbjct: 61 SNMLKTLDRYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGPL 120
Query: 137 NARDLKNLETKLEKGISRIRSKKNEMLFAEIEYMQKREIDLHNSNQLLRAKIAESDERKN 196
N+++L+ LE +L+ + ++RS K + + ++ +Q +E L +N+ L K+ + ++
Sbjct: 121 NSKELEQLERQLDGSLKQVRSIKTQYMLDQLSDLQNKEQMLLETNRALAMKLDDMIGVRS 180
Query: 197 HNFNMLPGTTNFE-SLQQSQQPFDSRGFFQVTGLQP------NNNQCARQ 239
H+ G E ++ + S+G +Q P +N C+ Q
Sbjct: 181 HHMGGGGGWEGGEQNVTYAHHQAQSQGLYQPLECNPTLQMGYDNPVCSEQ 230
>AGL8_SOLTU (Q42429) Agamous-like MADS box protein AGL8 homolog
(POTM1-1)
Length = 250
Score = 153 bits (386), Expect = 4e-37
Identities = 89/244 (36%), Positives = 144/244 (58%), Gaps = 14/244 (5%)
Query: 18 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSNRGRLYEYANN 77
MGRG++++KRIEN NRQVTF KRR+GLLKKA+E+SVLCDAEV LIVFS +G+L+EYAN+
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYAND 60
Query: 78 S-VKASIERYKKACSDSSGGGSTSGANAQFYQQEAAKLRVQISNLQNHNRQMLGEALSNM 136
S ++ +ERY++ T + + E AKL+ ++ LQ + + +GE L ++
Sbjct: 61 SCMERLLERYERYSFAERQLVPTDHTSPGSWTLEHAKLKARLEVLQRNQKHYVGEDLESL 120
Query: 137 NARDLKNLETKLEKGISRIRSKKNEMLFAEIEYMQKREIDLHNSNQLLRAKIAESD---- 192
N ++L+NLE +L+ + IRS+KN+++ I +QK++ L N L K+ E +
Sbjct: 121 NMKELQNLEHQLDSALKHIRSRKNQLMHESISVLQKQDRALQEQNNQLSKKVKEREKEVA 180
Query: 193 -----ERKNHNFN----MLPGTTNFESLQQSQQPFDSRGFFQVTGLQPNNNQCARQDQIS 243
+++NH N +LP + L ++ Q + +V G + Q A + +
Sbjct: 181 QQNQWDQQNHEINSSTFVLPQQLDSPHLGEAYQNTNVVDNGEVEGGNSSQQQGAANNTVM 240
Query: 244 LQFV 247
Q++
Sbjct: 241 PQWM 244
>M13_GNEGN (Q9XGJ4) MADS box protein GGM13
Length = 237
Score = 152 bits (384), Expect = 7e-37
Identities = 85/175 (48%), Positives = 121/175 (68%), Gaps = 7/175 (4%)
Query: 18 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSNRGRLYEY--A 75
MGRGKIEIKRIENTTNRQVTF KRR GLLKKA+ELSVLCDAE+ LI+FS+ G+L+EY A
Sbjct: 1 MGRGKIEIKRIENTTNRQVTFSKRRGGLLKKAHELSVLCDAELGLIIFSSSGKLFEYSSA 60
Query: 76 NNSVKASIERYKKACSDSSGGGSTSGANAQFYQQEAAKLRVQISNLQNHNRQMLGEALSN 135
++S+K IERY+K SG T N Y E +++ + LQ + R+M+GE L++
Sbjct: 61 SSSMKKIIERYQKV----SGARITEYDNQHLY-CEMTRMKNENEKLQTNIRRMMGEDLTS 115
Query: 136 MNARDLKNLETKLEKGISRIRSKKNEMLFAEIEYMQKREIDLHNSNQLLRAKIAE 190
+ +L +L +LE SR+RS+KN+++ ++E ++++E L + N L +AE
Sbjct: 116 LTMTELHHLGQQLESASSRVRSRKNQLMLQQLENLRRKERILEDQNSHLCRLLAE 170
>AGL9_LYCES (Q42464) Agamous-like MADS box protein AGL9 homolog
(TM5)
Length = 224
Score = 152 bits (383), Expect = 9e-37
Identities = 81/178 (45%), Positives = 123/178 (68%), Gaps = 2/178 (1%)
Query: 18 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSNRGRLYEY-AN 76
MGRG++E+KRIE NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FSNRG+LYE+ ++
Sbjct: 1 MGRGRVELKRIEGKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
Query: 77 NSVKASIERYKKACSDSSGGG-STSGANAQFYQQEAAKLRVQISNLQNHNRQMLGEALSN 135
+S+ ++ERY+K + ST A QQE KL+ + LQ R +LGE L
Sbjct: 61 SSMLKTLERYQKCNYGAPEPNISTREALEISSQQEYLKLKGRYEALQRSQRNLLGEDLGP 120
Query: 136 MNARDLKNLETKLEKGISRIRSKKNEMLFAEIEYMQKREIDLHNSNQLLRAKIAESDE 193
+N+++L++LE +L+ + +IRS + +++ ++ Q++E L+ +N+ L+ ++ E +
Sbjct: 121 LNSKELESLERQLDMSLKQIRSTRTQLMLDQLTDYQRKEHALNEANRTLKQRLMEGSQ 178
>AG19_ARATH (O82743) Agamous-like MADS box protein AGL19
Length = 219
Score = 152 bits (383), Expect = 9e-37
Identities = 80/170 (47%), Positives = 118/170 (69%), Gaps = 1/170 (0%)
Query: 18 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSNRGRLYEYANN 77
M RGK E+KRIEN T+RQVTF KRRNGLLKKA+ELSVLCDAEVAL++FS R +LYE++++
Sbjct: 1 MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALVIFSPRSKLYEFSSS 60
Query: 78 SVKASIERYKKACSDSSGGGSTSGANAQFYQQEAAKLRVQISNLQNHNRQMLGEALSNMN 137
S+ A+IERY++ + G N+Q + E + L +I L+ R++LGE + +
Sbjct: 61 SIAATIERYQRRIKE-IGNNHKRNDNSQQARDETSGLTKKIEQLEISKRKLLGEGIDACS 119
Query: 138 ARDLKNLETKLEKGISRIRSKKNEMLFAEIEYMQKREIDLHNSNQLLRAK 187
+L+ LE +L++ +SRIR+KK ++L EIE ++ E +L N+ L+ K
Sbjct: 120 IEELQQLENQLDRSLSRIRAKKYQLLREEIEKLKAEERNLVKENKDLKEK 169
>AG13_ARATH (Q38837) Agamous-like MADS box protein AGL13
Length = 244
Score = 152 bits (383), Expect = 9e-37
Identities = 89/225 (39%), Positives = 138/225 (60%), Gaps = 9/225 (4%)
Query: 18 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSNRGRLYEYANN 77
MGRGK+E+KRIEN RQVTF KR++GLLKKAYELSVLCDAEV+LI+FS G+LYE++N
Sbjct: 1 MGRGKVEVKRIENKITRQVTFSKRKSGLLKKAYELSVLCDAEVSLIIFSTGGKLYEFSNV 60
Query: 78 SVKASIERYKKACSDSSGGGSTSGANAQFYQQEAAKLRVQISNLQNHNRQMLGEALSNMN 137
V +IERY + C D+ T + Q +QE KL+ + +L +R ++GE L M+
Sbjct: 61 GVGRTIERYYR-CKDNLLDNDTL-EDTQGLRQEVTKLKCKYESLLRTHRNLVGEDLEGMS 118
Query: 138 ARDLKNLETKLEKGISRIRSKKNEMLFAEIEYMQKREIDLHNSNQLLRAKIAESDERKNH 197
++L+ LE +LE +S R +K +++ ++E ++++E +L + N L+ + + D +
Sbjct: 119 IKELQTLERQLEGALSATRKQKTQVMMEQMEELRRKERELGDINNKLKLETEDHDFKGFQ 178
Query: 198 NFNMLP----GTTNFESLQQSQQPFDS---RGFFQVTGLQPNNNQ 235
+ + P G + SLQ + Q + S G+F G Q + Q
Sbjct: 179 DLLLNPVLTAGCSTDFSLQSTHQNYISDCNLGYFLQIGFQQHYEQ 223
>AGL9_ARADE (Q38694) Agamous-like MADS box protein AGL9 homolog
(OM1)
Length = 250
Score = 151 bits (382), Expect = 1e-36
Identities = 84/206 (40%), Positives = 129/206 (61%), Gaps = 5/206 (2%)
Query: 18 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSNRGRLYEY-AN 76
MGRG++E+K IEN NRQVTF KRR LLKKAYELSVLCDAEVALI+FSNRG+LYE+ ++
Sbjct: 1 MGRGRVELKMIENKINRQVTFAKRRKRLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
Query: 77 NSVKASIERYKKACSDSSGGGSTSGANAQFYQQEAAKLRVQISNLQNHNRQMLGEALSNM 136
S+ ++E+Y+K C+ S + Q QQE KL+ ++ LQ R +LGE L +
Sbjct: 61 TSMLKTLEKYQK-CNFGSPESTIISRETQSSQQEYLKLKNRVEALQRSQRNLLGEDLGPL 119
Query: 137 NARDLKNLETKLEKGISRIRSKKNEMLFAEIEYMQKREIDLHNSNQLLRAKIAESDERKN 196
+++L+ LE +L+ + +IRS + + + ++ +Q+RE L +N+ L+ + ES +
Sbjct: 120 GSKELEQLERQLDSSLRQIRSTRTQFMLDQLADLQRREQMLCEANKTLKRRFEESSQA-- 177
Query: 197 HNFNMLPGTTNFESLQQSQQPFDSRG 222
N + +N ++ +QP G
Sbjct: 178 -NQQQVWDPSNTHAVGYGRQPAQHHG 202
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.314 0.128 0.346
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,461,923
Number of Sequences: 164201
Number of extensions: 958120
Number of successful extensions: 2886
Number of sequences better than 10.0: 139
Number of HSP's better than 10.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 59
Number of HSP's that attempted gapping in prelim test: 2740
Number of HSP's gapped (non-prelim): 156
length of query: 247
length of database: 59,974,054
effective HSP length: 107
effective length of query: 140
effective length of database: 42,404,547
effective search space: 5936636580
effective search space used: 5936636580
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 64 (29.3 bits)
Lotus: description of TM0404.13